Coturnix japonica isolate 7356 chromosome 27, Coturnix japonica 2.1, whole genome shotgun sequence.
type: Entry
definition: Coturnix japonica isolate 7356 chromosome 27, Coturnix japonica 2.1, whole genome shotgun sequence.
sequence version: NC_029542.1
sequence date: 2020-02-18
sequence: sequence
division: CON
label: NC_029542.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA314147
dblink: SAMN03989050
keyword: WGS
keyword: RefSeq
source: Coturnix japonica (Japanese quail)
organism: Coturnix japonica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003807.1.\nAssembly name: Coturnix japonica 2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The International Quail Genome\nConsortium on 2016/03/01. The original whole-genome shotgun project\nhas the accession LSZS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: McDonnell Genome Institute - Washington\n University School of Medicine\nAssembly Method :: ALLPATHS-LG v. 4.7.0\nAssembly Name :: Coturnix japonica 2.1\nGenome Coverage :: 73X\nSequencing Technology :: Illumina GA IIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Coturnix japonica Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 4779900
topology: linear
so has quality: SO_0000987
location: 1..4779900
location: region:1-4779900:1
RO_0002162: 93934

NC_029542
type: RefSeq
SIO_000068: refseq

PRJNA314147
type: BioProject
SIO_000068: bioproject

SAMN03989050
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4779900:1
position: 4779900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4779900:1:source
so part of: sequence
organism: Coturnix japonica
mol type: genomic DNA
isolate: 7356
chromosome: 27
sex: male
tissue type: blood
country: France: Tours, INRA PEAT

93934
type: Taxonomy
SIO_000068: taxonomy

LOC107324939
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2209..3697
location: region:2209-3697:1
so has part: feature:2209-3697:1:exon
subclass of: SO_0000010

107324939
type: Gene
SIO_000068: ncbigene

position:2209:1
position: 2209
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3697:1
position: 3697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2209-3697:1:exon

LOC107324939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324939
product: olfactory receptor 10A7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins
transcript id: XM_015885398.2
SIO_010081: LOC107324939
subclass of: SO_0000673
so part of: LOC107324939
location: join(<2209..2312,2660..3697)
location: region:2209-3697:1
so has part: feature:2209-2312:1:exon
so has part: feature:2660-3697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2209-2312:1:exon

position:2312:1
position: 2312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2660-3697:1:exon

position:2660:1
position: 2660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: olfactory receptor 10A7-like
translation: KDTYLVLLCFALVLLSLDCDCFDCQMGFQSLFVLVFWLSAGLKHSDFSILTSPLLLYPFDSSQMKANEGRELENHTLLMGFVLSGLSSHPEMQNLVFFIFCLIYTFSIAGNLLIFLVTLHPTLHMPMYFFLRVLSFLDISTASIVVPKMLVNFQSEDRKISYVGCATQLYFVIFLAATECYILAAMAYDRYVAICNPLRYTIIMNRRASLFLVLLSYCSGNVVSVVQTAWVFTLPFCGPNKINYFFCDIPPLIMLSCTDTSLYEKQIVTATVLVIFTPFCLILVSYACIISSILKISSAEGRRKTFSTCSSHLIVVTLYYGSGTLIYLRPKSSNSQDTKKVLSLIYTAIIPTLNPLIYSLRNKEVKAVIIRILAYLRKI
SIO_010081: LOC107324939
subclass of: SO_0000673
so part of: LOC107324939
location: join(<2209..2312,2660..3697)
location: region:2209-3697:1
so has part: feature:2209-2312:1:exon
so has part: feature:2660-3697:1:exon

XP_015740884.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2209-2312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2660-3697:1:exon

LOC107324966
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15694..30925)
location: region:15694-30925:-1
so has part: feature:15694-30925:-1:exon
subclass of: SO_0000011

107324966
type: Gene
SIO_000068: ncbigene

position:15694:-1
position: 15694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30925:-1
position: 30925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15694-30925:-1:exon

LOC107324966
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107324966
product: uncharacterized LOC107324966
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001559595.2
SIO_010081: LOC107324966
subclass of: SO_0000673
so part of: LOC107324966
location: complement(join(15694..15836,21784..22116,25764..25856,26638..29035,30700..30925))
location: region:15694-30925:-1
so has part: feature:30700-30925:-1:exon
so has part: feature:26638-29035:-1:exon
so has part: feature:25764-25856:-1:exon
so has part: feature:21784-22116:-1:exon
so has part: feature:15694-15836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30700-30925:-1:exon

position:30700:-1
position: 30700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26638-29035:-1:exon

position:26638:-1
position: 26638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29035:-1
position: 29035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25764-25856:-1:exon

position:25764:-1
position: 25764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25856:-1
position: 25856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21784-22116:-1:exon

position:21784:-1
position: 21784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22116:-1
position: 22116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15694-15836:-1:exon

position:15836:-1
position: 15836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VWA5A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: VWA5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21239..29593
location: region:21239-29593:1
so has part: feature:21239-29593:1:exon
subclass of: SO_0000010

107324965
type: Gene
SIO_000068: ncbigene

position:21239:1
position: 21239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29593:1
position: 29593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21239-29593:1:exon

VWA5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VWA5A
product: von Willebrand factor A domain containing 5A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032440890.1
SIO_010081: VWA5A
subclass of: SO_0000673
so part of: VWA5A
location: join(21239..21317,21745..22320,22668..22810,22965..23076,23506..23633,23783..23871,24392..24534,24867..24946,25431..25539,26434..26598,26739..26842,27142..27323,27487..27685,28232..28455,28606..28732,28926..29593)
location: region:21239-29593:1
so has part: feature:21239-21317:1:exon
so has part: feature:21745-22320:1:exon
so has part: feature:22668-22810:1:exon
so has part: feature:22965-23076:1:exon
so has part: feature:23506-23633:1:exon
so has part: feature:23783-23871:1:exon
so has part: feature:24392-24534:1:exon
so has part: feature:24867-24946:1:exon
so has part: feature:25431-25539:1:exon
so has part: feature:26434-26598:1:exon
so has part: feature:26739-26842:1:exon
so has part: feature:27142-27323:1:exon
so has part: feature:27487-27685:1:exon
so has part: feature:28232-28455:1:exon
so has part: feature:28606-28732:1:exon
so has part: feature:28926-29593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21239-21317:1:exon

position:21317:1
position: 21317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21745-22320:1:exon

position:21745:1
position: 21745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22320:1
position: 22320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22668-22810:1:exon

position:22668:1
position: 22668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22810:1
position: 22810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22965-23076:1:exon

position:22965:1
position: 22965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23076:1
position: 23076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23506-23633:1:exon

position:23506:1
position: 23506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23633:1
position: 23633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23783-23871:1:exon

position:23783:1
position: 23783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23871:1
position: 23871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:24392-24534:1:exon

position:24392:1
position: 24392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24534:1
position: 24534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24867-24946:1:exon

position:24867:1
position: 24867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24946:1
position: 24946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25431-25539:1:exon

position:25431:1
position: 25431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25539:1
position: 25539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:26434-26598:1:exon

position:26434:1
position: 26434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26598:1
position: 26598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:26739-26842:1:exon

position:26739:1
position: 26739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26842:1
position: 26842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:27142-27323:1:exon

position:27142:1
position: 27142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27323:1
position: 27323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:27487-27685:1:exon

position:27487:1
position: 27487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27685:1
position: 27685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:28232-28455:1:exon

position:28232:1
position: 28232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28455:1
position: 28455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:28606-28732:1:exon

position:28606:1
position: 28606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28732:1
position: 28732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:28926-29593:1:exon

position:28926:1
position: 28926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VWA5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VWA5A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:22041..22043,aa:OTHER)
product: LOW QUALITY PROTEIN: von Willebrand factor A domain-containing protein 5A
translation: MRLFPVCRSPEMWHQSFGLPGKSYINVPGSFLLGKEFYVPLWSLPLCSAVVDVAIQDYVADAVSELIYRNESLRSSEVTFVFPLEHHMAIYSFQACSEDAKVKAVLQDEVTAFGKAWENHESSMGXAARGLVSDLLSVPLLPIQTQRLYEATGEEENFEYLQYKVEKSDEVFACFLGSLSPGKEMVVTLCYAQELSRKPDGAAQFVLPSTLHPYKILYTCNCRPGKLHYSLLLTASLQSPRGVADVQANCALTPLIYTAQDHSAAQVSLAGTPPDHHLELLVYYREPTAVSVVVEKGDPVATAGSLFGNSLVLVTLAPRIPDAKPGQYKSGEFIFVLDNTTLEHTKDPLLFLLKSLPLGCYFNIYCYGATPVGIYPQSVEYTQDNLNEAIQLISTTGSRLGDXDLLGTLRTIYNTPRPCRHARQLFIFMSGLPPNKEAIAAEVCRHRNSHRCFSFCFSTDSASLATALARETEGEAIYVSSDNAVVQVLKCLKQALKPVAEGVSLEWTLPSGLEVEVLGGTPQFIFQGQHIFLYAQIHGKEQDMKEASGVMTLQFNLDGQDVTHKIQFPLCSHGDGRMAGHHLAARNLLEKLLLEVARGSGDEPMQRAIEISLTSGIICPFTSYVVVRTSRRAHWYCGPLALLPPRQSFVPCKILMLRGSLTSTSCFPKTIWNPPSWYTAVQEXAIKRLTNDIANLLQHGAHKEAPKQPQPSTSSLKYVDSTTFVLCSPIFGPWMSETIAECRELVALQNVDDSWTLTSGLASVLQVDEAEIKGKMPGEVMDPNFWATVMAVTWLQRHNRCYHELCDLLEAKAVTWLCSQAVSQLDKCLEASNTLLGSSVNPSVFRL
SIO_010081: VWA5A
subclass of: SO_0000673
so part of: VWA5A
location: join(21239..21317,21745..22320,22668..22810,22965..23076,23506..23633,23783..23871,24392..24534,24867..24946,25431..25539,26434..26598,26739..26842,27142..27323,27487..27685,28232..28455,28606..28732,28926..29005)
location: region:21239-29005:1
so has part: feature:21239-21317:1:exon
so has part: feature:21745-22320:1:exon
so has part: feature:22668-22810:1:exon
so has part: feature:22965-23076:1:exon
so has part: feature:23506-23633:1:exon
so has part: feature:23783-23871:1:exon
so has part: feature:24392-24534:1:exon
so has part: feature:24867-24946:1:exon
so has part: feature:25431-25539:1:exon
so has part: feature:26434-26598:1:exon
so has part: feature:26739-26842:1:exon
so has part: feature:27142-27323:1:exon
so has part: feature:27487-27685:1:exon
so has part: feature:28232-28455:1:exon
so has part: feature:28606-28732:1:exon
so has part: feature:28926-29005:1:exon

XP_032296781.1
type: Protein
SIO_000068: ncbiprotein

position:29005:1
position: 29005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21239-21317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21745-22320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22668-22810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22965-23076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23506-23633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23783-23871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24392-24534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24867-24946:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25431-25539:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26434-26598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:26739-26842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27142-27323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27487-27685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:28232-28455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:28606-28732:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:28926-29005:1:exon

DAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30948..33370
location: region:30948-33370:1
so has part: feature:30948-33370:1:exon
subclass of: SO_0000010

107324964
type: Gene
SIO_000068: ncbigene

position:30948:1
position: 30948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33370:1
position: 33370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30948-33370:1:exon

DAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DAD1
product: defender against cell death 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015885407.2
SIO_010081: DAD1
subclass of: SO_0000673
so part of: DAD1
location: join(30948..31262,32571..32719,33181..33370)
location: region:30948-33370:1
so has part: feature:30948-31262:1:exon
so has part: feature:32571-32719:1:exon
so has part: feature:33181-33370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30948-31262:1:exon

position:31262:1
position: 31262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32571-32719:1:exon

position:32571:1
position: 32571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32719:1
position: 32719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33181-33370:1:exon

position:33181:1
position: 33181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
translation: MSGATGSGAGAAGSVGSVVRRFLAEYGSGTPSRLKVLDAYLLYVMLTGALQFGYCLGVGTFPFNSFLSGFISAVGSFILGVCLRIQINPQNKGEFQGISPERAFADFLFANTILHLVVINFVG
SIO_010081: DAD1
subclass of: SO_0000673
so part of: DAD1
location: join(31022..31262,32571..32701)
location: region:31022-32701:1
so has part: feature:31022-31262:1:exon
so has part: feature:32571-32701:1:exon

XP_015740893.2
type: Protein
SIO_000068: ncbiprotein

position:31022:1
position: 31022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32701:1
position: 32701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31022-31262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32571-32701:1:exon

LOC107324954
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40514..68413)
location: region:40514-68413:-1
so has part: feature:40514-68413:-1:exon
subclass of: SO_0000010

107324954
type: Gene
SIO_000068: ncbigene

position:40514:-1
position: 40514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68413:-1
position: 68413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40514-68413:-1:exon

LOC107324954
type: Constant Region
subclass of: SO_0001834
RO_0002162: 93934
gene: LOC107324954
standard name: M1-specific T cell receptor alpha chain-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
SIO_010081: LOC107324954
subclass of: SO_0000673
so part of: LOC107324954
location: complement(join(40514..40918,41395..41501,42581..42628,43047..43310,68326..68413))
location: region:40514-68413:-1
so has part: feature:68326-68413:-1:exon
so has part: feature:43047-43310:-1:exon
so has part: feature:42581-42628:-1:exon
so has part: feature:41395-41501:-1:exon
so has part: feature:40514-40918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68326-68413:-1:exon

position:68326:-1
position: 68326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43047-43310:-1:exon

position:43047:-1
position: 43047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43310:-1
position: 43310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42581-42628:-1:exon

position:42581:-1
position: 42581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42628:-1
position: 42628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41395-41501:-1:exon

position:41395:-1
position: 41395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41501:-1
position: 41501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40514-40918:-1:exon

position:40918:-1
position: 40918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324954
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M1-specific T cell receptor alpha chain-like isoform X8
SIO_010081: LOC107324954
subclass of: SO_0000673
so part of: LOC107324954
location: complement(join(40907..40918,41395..41501,42581..42628,43047..43310,68326..68398))
location: region:40907-68398:-1
so has part: feature:68326-68398:-1:exon
so has part: feature:43047-43310:-1:exon
so has part: feature:42581-42628:-1:exon
so has part: feature:41395-41501:-1:exon
so has part: feature:40907-40918:-1:exon

position:40907:-1
position: 40907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68398:-1
position: 68398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68326-68398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43047-43310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42581-42628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41395-41501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40907-40918:-1:exon

LOC107324962
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99585..105116)
location: region:99585-105116:-1
so has part: feature:99585-105116:-1:exon
subclass of: SO_0000011

107324962
type: Gene
SIO_000068: ncbigene

position:99585:-1
position: 99585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105116:-1
position: 105116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99585-105116:-1:exon

LOC107324962
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107324962
product: uncharacterized LOC107324962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_001559592.2
SIO_010081: LOC107324962
subclass of: SO_0000673
so part of: LOC107324962
location: complement(join(99585..100186,100755..100871,101227..101289,101893..102177,104456..105116))
location: region:99585-105116:-1
so has part: feature:104456-105116:-1:exon
so has part: feature:101893-102177:-1:exon
so has part: feature:101227-101289:-1:exon
so has part: feature:100755-100871:-1:exon
so has part: feature:99585-100186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104456-105116:-1:exon

position:104456:-1
position: 104456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101893-102177:-1:exon

position:101893:-1
position: 101893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102177:-1
position: 102177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101227-101289:-1:exon

position:101227:-1
position: 101227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101289:-1
position: 101289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100755-100871:-1:exon

position:100755:-1
position: 100755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100871:-1
position: 100871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:99585-100186:-1:exon

position:100186:-1
position: 100186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324940
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137683..138355)
location: region:137683-138355:-1
so has part: feature:137683-138355:-1:exon
subclass of: SO_0000010

107324940
type: Gene
SIO_000068: ncbigene

position:137683:-1
position: 137683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138355:-1
position: 138355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137683-138355:-1:exon

LOC107324940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324940
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain V region C3-like
SIO_010081: LOC107324940
subclass of: SO_0000673
so part of: LOC107324940
location: complement(join(137683..137999,138304..138355))
location: region:137683-138355:-1
so has part: feature:138304-138355:-1:exon
so has part: feature:137683-137999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138304-138355:-1:exon

position:138304:-1
position: 138304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137683-137999:-1:exon

position:137999:-1
position: 137999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324940
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324940
standard name: Ig heavy chain V region C3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
SIO_010081: LOC107324940
subclass of: SO_0000673
so part of: LOC107324940
location: complement(join(137683..137999,138304..138355))
location: region:137683-138355:-1
so has part: feature:138304-138355:-1:exon
so has part: feature:137683-137999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138304-138355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137683-137999:-1:exon

LOC107324947
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141721..149402)
location: region:141721-149402:-1
so has part: feature:141721-149402:-1:exon
subclass of: SO_0000010

107324947
type: Gene
SIO_000068: ncbigene

position:141721:-1
position: 141721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149402:-1
position: 149402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141721-149402:-1:exon

LOC107324947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324947
product: uncharacterized LOC107324947, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032449384.1
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(141721..141805,146585..146652,148308..149402))
location: region:141721-149402:-1
so has part: feature:148308-149402:-1:exon
so has part: feature:146585-146652:-1:exon
so has part: feature:141721-141805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148308-149402:-1:exon

position:148308:-1
position: 148308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146585-146652:-1:exon

position:146585:-1
position: 146585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146652:-1
position: 146652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141721-141805:-1:exon

position:141805:-1
position: 141805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324947 isoform X3
translation: MPWQAGGKEVTRSCRCFSRGRTGNGRLRADSPCVGAAVMWLAEARASSFMHAEVHRDQPSARTLRVPGRRAPPLPPALPRVPPPARSILRRRGCGAGPGGAVGAAPPRPDEECPERGPALLLSASRADGNGEMVAGLGPWLLALALGPAGACAEWRLEASGGGVRAPGKSVKECVDSGDWKHLVEVCKHLGSL
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(141740..141805,146585..146652,148308..148755))
location: region:141740-148755:-1
so has part: feature:148308-148755:-1:exon
so has part: feature:146585-146652:-1:exon
so has part: feature:141740-141805:-1:exon

XP_032305275.1
type: Protein
SIO_000068: ncbiprotein

position:141740:-1
position: 141740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148755:-1
position: 148755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148308-148755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146585-146652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141740-141805:-1:exon

LOC107324947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324947
product: uncharacterized LOC107324947, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032449383.1
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(145935..146652,148308..149402))
location: region:145935-149402:-1
so has part: feature:148308-149402:-1:exon
so has part: feature:145935-146652:-1:exon

position:145935:-1
position: 145935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148308-149402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145935-146652:-1:exon

LOC107324947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324947 isoform X1
translation: MPWQAGGKEVTRSCRCFSRGRTGNGRLRADSPCVGAAVMWLAEARASSFMHAEVHRDQPSARTLRVPGRRAPPLPPALPRVPPPARSILRRRGCGAGPGGAVGAAPPRPDEECPERGPALLLSASRADGNGEMVAGLGPWLLALALGPAGACAEWRLEASGGGVRAPGKSVKVSCHGYGVKLGGVWWYRQAPGGHLKWLSGISTDSYVVSSPEVKGRVKGFRDNSQAIISLSLHNLCPEDSARYFCAVTQEQDMLQRSDKNPFLDTVMVAGGTGLEVAGEALCCSWGVMGCQSTPQTALPFLQSSFVLTTPSLLQIPVSSVVMWGLCSAYFWLSKHQPLYLPALRPSGLIGSWFPSLLGYP
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(146015..146652,148308..148755))
location: region:146015-148755:-1
so has part: feature:148308-148755:-1:exon
so has part: feature:146015-146652:-1:exon

XP_032305274.1
type: Protein
SIO_000068: ncbiprotein

position:146015:-1
position: 146015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148308-148755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146015-146652:-1:exon

LOC107324947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324947
product: uncharacterized LOC107324947, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_015885402.2
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(147052..147969,148308..149402))
location: region:147052-149402:-1
so has part: feature:148308-149402:-1:exon
so has part: feature:147052-147969:-1:exon

position:147052:-1
position: 147052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148308-149402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147052-147969:-1:exon

position:147969:-1
position: 147969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324947 isoform X2
translation: MPWQAGGKEVTRSCRCFSRGRTGNGRLRADSPCVGAAVMWLAEARASSFMHAEVHRDQPSARTLRVPGRRAPPLPPALPRVPPPARSILRRRGCGAGPGGAVGAAPPRPDEECPERGPALLLSASRADGNGEMVAGLGPWLLALALGPAGVCAEWRLEAYGGGVQAPGESVQLSCRGSGFSFGDYPVWWYRRALSGHLEWLSTTSTGSYVSKYSSEVQGRATVSRDDSRSVSSLYLRTLHPHDSAHYFCAVHTGTGNPAEL
SIO_010081: LOC107324947
subclass of: SO_0000673
so part of: LOC107324947
location: complement(join(147632..147969,148308..148755))
location: region:147632-148755:-1
so has part: feature:148308-148755:-1:exon
so has part: feature:147632-147969:-1:exon

XP_015740888.1
type: Protein
SIO_000068: ncbiprotein

position:147632:-1
position: 147632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148308-148755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147632-147969:-1:exon

LOC107324957
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160292..162842)
location: region:160292-162842:-1
so has part: feature:160292-162842:-1:exon
subclass of: SO_0000010

107324957
type: Gene
SIO_000068: ncbigene

position:160292:-1
position: 160292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162842:-1
position: 162842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160292-162842:-1:exon

LOC107324957
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324957
standard name: T cell receptor alpha variable 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
SIO_010081: LOC107324957
subclass of: SO_0000673
so part of: LOC107324957
location: complement(join(160292..162624,162763..162842))
location: region:160292-162842:-1
so has part: feature:162763-162842:-1:exon
so has part: feature:160292-162624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162763-162842:-1:exon

position:162763:-1
position: 162763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160292-162624:-1:exon

position:162624:-1
position: 162624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324957
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324957
subclass of: SO_0000673
so part of: LOC107324957
location: complement(join(162224..162624,162763..162811))
location: region:162224-162811:-1
so has part: feature:162763-162811:-1:exon
so has part: feature:162224-162624:-1:exon

position:162224:-1
position: 162224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162811:-1
position: 162811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162763-162811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162224-162624:-1:exon

LOC107324941
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(163029..164500)
location: region:163029-164500:-1
so has part: feature:163029-164500:-1:exon

107324941
type: Gene
SIO_000068: ncbigene

position:163029:-1
position: 163029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164500:-1
position: 164500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163029-164500:-1:exon

LOC107324941
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC107324941
subclass of: SO_0000673
so part of: LOC107324941
location: complement(163029..163402)
location: region:163029-163402:-1
so has part: feature:163029-163402:-1:exon

position:163402:-1
position: 163402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163029-163402:-1:exon

LOC107324941
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC107324941
subclass of: SO_0000673
so part of: LOC107324941
location: complement(164017..164272)
location: region:164017-164272:-1
so has part: feature:164017-164272:-1:exon

position:164017:-1
position: 164017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164272:-1
position: 164272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164017-164272:-1:exon

LOC107324941
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC107324941
subclass of: SO_0000673
so part of: LOC107324941
location: complement(164427..164500)
location: region:164427-164500:-1
so has part: feature:164427-164500:-1:exon

position:164427:-1
position: 164427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164427-164500:-1:exon

LOC107324953
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(169943..172091)
location: region:169943-172091:-1
so has part: feature:169943-172091:-1:exon
subclass of: SO_0000010

107324953
type: Gene
SIO_000068: ncbigene

position:169943:-1
position: 169943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172091:-1
position: 172091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169943-172091:-1:exon

LOC107324953
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324953
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC107324953
subclass of: SO_0000673
so part of: LOC107324953
location: complement(169943..172091)
location: region:169943-172091:-1
so has part: feature:169943-172091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169943-172091:-1:exon

LOC107324953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324953
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324953
subclass of: SO_0000673
so part of: LOC107324953
location: complement(171489..171980)
location: region:171489-171980:-1
so has part: feature:171489-171980:-1:exon

position:171489:-1
position: 171489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171980:-1
position: 171980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171489-171980:-1:exon

LOC107324952
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(174550..175699)
location: region:174550-175699:-1
so has part: feature:174550-175699:-1:exon
subclass of: SO_0000010

107324952
type: Gene
SIO_000068: ncbigene

position:174550:-1
position: 174550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175699:-1
position: 175699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174550-175699:-1:exon

LOC107324952
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324952
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
SIO_010081: LOC107324952
subclass of: SO_0000673
so part of: LOC107324952
location: complement(join(174550..175387,175562..175699))
location: region:174550-175699:-1
so has part: feature:175562-175699:-1:exon
so has part: feature:174550-175387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175562-175699:-1:exon

position:175562:-1
position: 175562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174550-175387:-1:exon

position:175387:-1
position: 175387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324952
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324952
subclass of: SO_0000673
so part of: LOC107324952
location: complement(join(174915..175387,175562..175604))
location: region:174915-175604:-1
so has part: feature:175562-175604:-1:exon
so has part: feature:174915-175387:-1:exon

position:174915:-1
position: 174915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175604:-1
position: 175604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175562-175604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174915-175387:-1:exon

LOC107324960
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179052..179707
location: region:179052-179707:1
so has part: feature:179052-179707:1:exon
subclass of: SO_0000010

107324960
type: Gene
SIO_000068: ncbigene

position:179052:1
position: 179052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179707:1
position: 179707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179052-179707:1:exon

LOC107324960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324960
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885405.2
SIO_010081: LOC107324960
subclass of: SO_0000673
so part of: LOC107324960
location: 179052..179707
location: region:179052-179707:1
so has part: feature:179052-179707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179052-179707:1:exon

LOC107324960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCCNQCQPCRPCGPTPLASSCNEPCVRQCQNSTIVIQPSPAVVTLPGPILSSFPQNTAVGSSTSSAVGSILSSEGVPITSGGLDLSCISYRYCGRRCNPC
SIO_010081: LOC107324960
subclass of: SO_0000673
so part of: LOC107324960
location: 179118..179423
location: region:179118-179423:1
so has part: feature:179118-179423:1:exon

XP_015740891.1
type: Protein
SIO_000068: ncbiprotein

position:179118:1
position: 179118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179423:1
position: 179423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179118-179423:1:exon

LOC107324949
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179697..182248)
location: region:179697-182248:-1
so has part: feature:179697-182248:-1:exon
subclass of: SO_0000010

107324949
type: Gene
SIO_000068: ncbigene

position:179697:-1
position: 179697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182248:-1
position: 182248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179697-182248:-1:exon

LOC107324949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324949
product: uncharacterized LOC107324949
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032449389.1
SIO_010081: LOC107324949
subclass of: SO_0000673
so part of: LOC107324949
location: complement(join(179697..181293,182081..182248))
location: region:179697-182248:-1
so has part: feature:182081-182248:-1:exon
so has part: feature:179697-181293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182081-182248:-1:exon

position:182081:-1
position: 182081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179697-181293:-1:exon

position:181293:-1
position: 181293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324949
translation: MHHSYLVLTVFLGQLLDAMGQTIVTQQEGQVTVEEGNIFQTSCTYQTSSFDAFLWYQQKKGQAPQLVTYQAAAGPKHNGRFTTWLNTTEKYSLLQLAEVELSDSTLYLCAVQDTLVQGASSAVQQPRGGRSRVCARWSSGERGLSSPLAALLPLCTQRSAGQHPLPEGTDVCFLRGMKSDGRGPDLEILFCNLLDNTVFPWAVQRILAVL
SIO_010081: LOC107324949
subclass of: SO_0000673
so part of: LOC107324949
location: complement(join(180710..181293,182081..182129))
location: region:180710-182129:-1
so has part: feature:182081-182129:-1:exon
so has part: feature:180710-181293:-1:exon

XP_032305280.1
type: Protein
SIO_000068: ncbiprotein

position:180710:-1
position: 180710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182129:-1
position: 182129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182081-182129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180710-181293:-1:exon

LOC107324950
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183048..184559)
location: region:183048-184559:-1
so has part: feature:183048-184559:-1:exon
subclass of: SO_0000010

107324950
type: Gene
SIO_000068: ncbigene

position:183048:-1
position: 183048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184559:-1
position: 184559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183048-184559:-1:exon

LOC107324950
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324950
product: uncharacterized LOC107324950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449385.1
SIO_010081: LOC107324950
subclass of: SO_0000673
so part of: LOC107324950
location: complement(183048..184559)
location: region:183048-184559:-1
so has part: feature:183048-184559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183048-184559:-1:exon

LOC107324950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324950
translation: MEQGAAPGRSWRRRRGGGAEGGAEPGLAEAALRGLRNNGMRLWRATGLAGLAAVLLGARCYRRRGRTLWGLRGDGPGLSSCPSASLRARAALSFCMKLQRKKMDFLSLLLIFFSAVALSRAQVQQEPSAETSEGTGVNITCSHNNIQLGYYIQWYSQLPGRGPAFLVSAVKGSKEVLDPVGRLSVSEDRRSSALWLSRPRLGDAAVYYCVLGTRGEEPGLRLSTNRFGRSGDTVPSGPAGGDAAPPAGASRAYSADLENVPRTARHPPE
SIO_010081: LOC107324950
subclass of: SO_0000673
so part of: LOC107324950
location: complement(183470..184279)
location: region:183470-184279:-1
so has part: feature:183470-184279:-1:exon

XP_032305276.1
type: Protein
SIO_000068: ncbiprotein

position:183470:-1
position: 183470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184279:-1
position: 184279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183470-184279:-1:exon

LOC107324961
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189139..189762
location: region:189139-189762:1
so has part: feature:189139-189762:1:exon
subclass of: SO_0000010

107324961
type: Gene
SIO_000068: ncbigene

position:189139:1
position: 189139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189762:1
position: 189762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189139-189762:1:exon

LOC107324961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324961
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449388.1
SIO_010081: LOC107324961
subclass of: SO_0000673
so part of: LOC107324961
location: 189139..189762
location: region:189139-189762:1
so has part: feature:189139-189762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189139-189762:1:exon

LOC107324961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCYTQCMPCRPCGPTPLASSCNEPCVRQCQNSTIVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPITSGGFDLSGLGSRYCGRRCLP
SIO_010081: LOC107324961
subclass of: SO_0000673
so part of: LOC107324961
location: 189240..189542
location: region:189240-189542:1
so has part: feature:189240-189542:1:exon

XP_032305279.1
type: Protein
SIO_000068: ncbiprotein

position:189240:1
position: 189240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189542:1
position: 189542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189240-189542:1:exon

LOC107324948
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190049..191238)
location: region:190049-191238:-1
so has part: feature:190049-191238:-1:exon
subclass of: SO_0000010

107324948
type: Gene
SIO_000068: ncbigene

position:190049:-1
position: 190049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191238:-1
position: 191238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190049-191238:-1:exon

LOC107324948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324948
product: uncharacterized LOC107324948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885403.2
SIO_010081: LOC107324948
subclass of: SO_0000673
so part of: LOC107324948
location: complement(190049..191238)
location: region:190049-191238:-1
so has part: feature:190049-191238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190049-191238:-1:exon

LOC107324948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107324948
translation: MSFLVIQMTARWFRVAAERSWGRLRGGGAAGGAESQGWQGQRGAGGRVAGCGSAGRSCRRCGANTSGSLVAFPARTSLCYSVKFQPEKMHFLSFFPLFFSAVAVSRAQVQQEPSAQTSEGTGINITCSHPNIGNTGYQEYIHWYRQLPGRGPTFLVSAFKGSKEIPDQAGRLSVSEDHRSSALWLARPRFADAAMYYCVLVARGVEPGLRPGTNRFGRDGSTVPSGPAGGAAFRATKLHPD
SIO_010081: LOC107324948
subclass of: SO_0000673
so part of: LOC107324948
location: complement(190491..191216)
location: region:190491-191216:-1
so has part: feature:190491-191216:-1:exon

XP_015740889.1
type: Protein
SIO_000068: ncbiprotein

position:190491:-1
position: 190491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191216:-1
position: 191216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190491-191216:-1:exon

LOC116654446
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(191127..193613)
location: region:191127-193613:-1
so has part: feature:191127-193613:-1:exon
subclass of: SO_0000010

116654446
type: Gene
SIO_000068: ncbigene

position:191127:-1
position: 191127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193613:-1
position: 193613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191127-193613:-1:exon

LOC116654446
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC116654446
standard name: T cell receptor alpha variable 1-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
SIO_010081: LOC116654446
subclass of: SO_0000673
so part of: LOC116654446
location: complement(join(191127..191819,192601..193613))
location: region:191127-193613:-1
so has part: feature:192601-193613:-1:exon
so has part: feature:191127-191819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192601-193613:-1:exon

position:192601:-1
position: 192601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191127-191819:-1:exon

position:191819:-1
position: 191819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116654446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654446
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 1-2-like isoform X2
SIO_010081: LOC116654446
subclass of: SO_0000673
so part of: LOC116654446
location: complement(join(191392..191819,192601..192649))
location: region:191392-192649:-1
so has part: feature:192601-192649:-1:exon
so has part: feature:191392-191819:-1:exon

position:191392:-1
position: 191392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192649:-1
position: 192649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192601-192649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191392-191819:-1:exon

LOC116654447
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195370..195810)
location: region:195370-195810:-1
so has part: feature:195370-195810:-1:exon
subclass of: SO_0000011

116654447
type: Gene
SIO_000068: ncbigene

position:195370:-1
position: 195370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195810:-1
position: 195810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195370-195810:-1:exon

LOC116654447
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654447
product: uncharacterized LOC116654447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_004309691.1
SIO_010081: LOC116654447
subclass of: SO_0000673
so part of: LOC116654447
location: complement(join(195370..195469,195680..195810))
location: region:195370-195810:-1
so has part: feature:195680-195810:-1:exon
so has part: feature:195370-195469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195680-195810:-1:exon

position:195680:-1
position: 195680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195370-195469:-1:exon

position:195469:-1
position: 195469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324951
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198119..199087)
location: region:198119-199087:-1
so has part: feature:198119-199087:-1:exon
subclass of: SO_0000010

107324951
type: Gene
SIO_000068: ncbigene

position:198119:-1
position: 198119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199087:-1
position: 199087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198119-199087:-1:exon

LOC107324951
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324951
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
SIO_010081: LOC107324951
subclass of: SO_0000673
so part of: LOC107324951
location: complement(join(198119..198624,198999..199087))
location: region:198119-199087:-1
so has part: feature:198999-199087:-1:exon
so has part: feature:198119-198624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198999-199087:-1:exon

position:198999:-1
position: 198999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198119-198624:-1:exon

position:198624:-1
position: 198624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324951
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324951
subclass of: SO_0000673
so part of: LOC107324951
location: complement(join(198212..198624,198999..199041))
location: region:198212-199041:-1
so has part: feature:198999-199041:-1:exon
so has part: feature:198212-198624:-1:exon

position:198212:-1
position: 198212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199041:-1
position: 199041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198999-199041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198212-198624:-1:exon

LOC107324959
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 216886..217519
location: region:216886-217519:1
so has part: feature:216886-217519:1:exon
subclass of: SO_0000010

107324959
type: Gene
SIO_000068: ncbigene

position:216886:1
position: 216886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217519:1
position: 217519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216886-217519:1:exon

LOC107324959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324959
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449387.1
SIO_010081: LOC107324959
subclass of: SO_0000673
so part of: LOC107324959
location: 216886..217519
location: region:216886-217519:1
so has part: feature:216886-217519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216886-217519:1:exon

LOC107324959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCYTQCVPCRPCGPTPLASSCNEPCVRQCQNSTIVIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGLGSRYCGRRCLP
SIO_010081: LOC107324959
subclass of: SO_0000673
so part of: LOC107324959
location: 216964..217266
location: region:216964-217266:1
so has part: feature:216964-217266:1:exon

XP_032305278.1
type: Protein
SIO_000068: ncbiprotein

position:216964:1
position: 216964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217266:1
position: 217266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216964-217266:1:exon

LOC107324942
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(218066..219092)
location: region:218066-219092:-1
so has part: feature:218066-219092:-1:exon
subclass of: SO_0000010

107324942
type: Gene
SIO_000068: ncbigene

position:218066:-1
position: 218066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219092:-1
position: 219092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218066-219092:-1:exon

LOC107324942
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324942
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
SIO_010081: LOC107324942
subclass of: SO_0000673
so part of: LOC107324942
location: complement(join(218066..218589,219026..219092))
location: region:218066-219092:-1
so has part: feature:219026-219092:-1:exon
so has part: feature:218066-218589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219026-219092:-1:exon

position:219026:-1
position: 219026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218066-218589:-1:exon

position:218589:-1
position: 218589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324942
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324942
subclass of: SO_0000673
so part of: LOC107324942
location: complement(join(218066..218589,219026..219068))
location: region:218066-219068:-1
so has part: feature:219026-219068:-1:exon
so has part: feature:218066-218589:-1:exon

position:219068:-1
position: 219068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219026-219068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218066-218589:-1:exon

LOC107324958
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231512..233718)
location: region:231512-233718:-1
so has part: feature:231512-233718:-1:exon
subclass of: SO_0000010

107324958
type: Gene
SIO_000068: ncbigene

position:231512:-1
position: 231512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233718:-1
position: 233718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231512-233718:-1:exon

LOC107324958
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324958
standard name: T cell receptor alpha variable 1-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
SIO_010081: LOC107324958
subclass of: SO_0000673
so part of: LOC107324958
location: complement(join(231512..232127,232944..233718))
location: region:231512-233718:-1
so has part: feature:232944-233718:-1:exon
so has part: feature:231512-232127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232944-233718:-1:exon

position:232944:-1
position: 232944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231512-232127:-1:exon

position:232127:-1
position: 232127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324958
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 1-2-like
SIO_010081: LOC107324958
subclass of: SO_0000673
so part of: LOC107324958
location: complement(join(231781..232127,232944..232992))
location: region:231781-232992:-1
so has part: feature:232944-232992:-1:exon
so has part: feature:231781-232127:-1:exon

position:231781:-1
position: 231781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232992:-1
position: 232992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232944-232992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231781-232127:-1:exon

LOC107324944
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(233728..234928)
location: region:233728-234928:-1
so has part: feature:233728-234928:-1:exon
subclass of: SO_0000010

107324944
type: Gene
SIO_000068: ncbigene

position:233728:-1
position: 233728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234928:-1
position: 234928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233728-234928:-1:exon

LOC107324944
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324944
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC107324944
subclass of: SO_0000673
so part of: LOC107324944
location: complement(join(233728..234701,234877..234928))
location: region:233728-234928:-1
so has part: feature:234877-234928:-1:exon
so has part: feature:233728-234701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234877-234928:-1:exon

position:234877:-1
position: 234877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233728-234701:-1:exon

position:234701:-1
position: 234701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324944
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324944
subclass of: SO_0000673
so part of: LOC107324944
location: complement(join(234136..234701,234877..234928))
location: region:234136-234928:-1
so has part: feature:234877-234928:-1:exon
so has part: feature:234136-234701:-1:exon

position:234136:-1
position: 234136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234877-234928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234136-234701:-1:exon

LOC107324945
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 234985..239734
location: region:234985-239734:1
so has part: feature:234985-239734:1:exon
subclass of: SO_0000010

107324945
type: Gene
SIO_000068: ncbigene

position:234985:1
position: 234985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239734:1
position: 239734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234985-239734:1:exon

LOC107324945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324945
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032440931.1
SIO_010081: LOC107324945
subclass of: SO_0000673
so part of: LOC107324945
location: join(234985..235453,239043..239734)
location: region:234985-239734:1
so has part: feature:234985-235453:1:exon
so has part: feature:239043-239734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234985-235453:1:exon

position:235453:1
position: 235453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239043-239734:1:exon

position:239043:1
position: 239043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MRPTPGASLVPGAAATPESRQRKRVLCCCPGTRHRESSTSSESRSLLLPVVLMSLLEESQKGRLRNRVYRQLQDMSCYTQCVPCRPCDTTPLASSCNEPCVRQCQNSTIVIELSPVVVTLPGPILSSFPQNTVVASSTSAAVGSILSSEGVPITSGGFDLSSFGSRYCGRRCLP
SIO_010081: LOC107324945
subclass of: SO_0000673
so part of: LOC107324945
location: join(235253..235453,239043..239366)
location: region:235253-239366:1
so has part: feature:235253-235453:1:exon
so has part: feature:239043-239366:1:exon

XP_032296822.1
type: Protein
SIO_000068: ncbiprotein

position:235253:1
position: 235253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239366:1
position: 239366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235253-235453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239043-239366:1:exon

LOC107324946
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240461..241849)
location: region:240461-241849:-1
so has part: feature:240461-241849:-1:exon
subclass of: SO_0000010

107324946
type: Gene
SIO_000068: ncbigene

position:240461:-1
position: 240461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241849:-1
position: 241849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240461-241849:-1:exon

LOC107324946
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324946
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC107324946
subclass of: SO_0000673
so part of: LOC107324946
location: complement(240461..241849)
location: region:240461-241849:-1
so has part: feature:240461-241849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240461-241849:-1:exon

LOC107324946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324946
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324946
subclass of: SO_0000673
so part of: LOC107324946
location: complement(240810..241340)
location: region:240810-241340:-1
so has part: feature:240810-241340:-1:exon

position:240810:-1
position: 240810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241340:-1
position: 241340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240810-241340:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 93934
estimated length: 100
gap type: between scaffolds
so part of: sequence
location: 250862..250961
location: region:250862-250961:1
so has part: feature:250862-250961:1:region

position:250862:1
position: 250862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250961:1
position: 250961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250862-250961:1:region

LOC107324970
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255433..255778
location: region:255433-255778:1
so has part: feature:255433-255778:1:exon
subclass of: SO_0000010

107324970
type: Gene
SIO_000068: ncbigene

position:255433:1
position: 255433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255778:1
position: 255778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255433-255778:1:exon

LOC107324970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324970
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032440927.1
SIO_010081: LOC107324970
subclass of: SO_0000673
so part of: LOC107324970
location: 255433..255778
location: region:255433-255778:1
so has part: feature:255433-255778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255433-255778:1:exon

LOC107324970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCYTQCVPCRPCGPTPLASSCNEPCVRQCQNSTIVIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGFGSRYCGRRYPP
SIO_010081: LOC107324970
subclass of: SO_0000673
so part of: LOC107324970
location: 255468..255770
location: region:255468-255770:1
so has part: feature:255468-255770:1:exon

XP_032296818.1
type: Protein
SIO_000068: ncbiprotein

position:255468:1
position: 255468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255770:1
position: 255770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255468-255770:1:exon

LOC107324969
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255816..257203)
location: region:255816-257203:-1
so has part: feature:255816-257203:-1:exon
subclass of: SO_0000010

107324969
type: Gene
SIO_000068: ncbigene

position:255816:-1
position: 255816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257203:-1
position: 257203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255816-257203:-1:exon

LOC107324969
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 93934
gene: LOC107324969
standard name: T cell receptor alpha variable 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC107324969
subclass of: SO_0000673
so part of: LOC107324969
location: complement(255816..257203)
location: region:255816-257203:-1
so has part: feature:255816-257203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255816-257203:-1:exon

LOC107324969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324969
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor alpha variable 4-like
SIO_010081: LOC107324969
subclass of: SO_0000673
so part of: LOC107324969
location: complement(256366..256920)
location: region:256366-256920:-1
so has part: feature:256366-256920:-1:exon

position:256366:-1
position: 256366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256920:-1
position: 256920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256366-256920:-1:exon

LOC107324975
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261179..261544
location: region:261179-261544:1
so has part: feature:261179-261544:1:exon
subclass of: SO_0000010

107324975
type: Gene
SIO_000068: ncbigene

position:261179:1
position: 261179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261544:1
position: 261544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261179-261544:1:exon

LOC107324975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324975
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885415.2
SIO_010081: LOC107324975
subclass of: SO_0000673
so part of: LOC107324975
location: 261179..261544
location: region:261179-261544:1
so has part: feature:261179-261544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261179-261544:1:exon

LOC107324975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCYTQCVPCRPCGPTPLASSCNEPCVRQCQNSNVVVEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGFGSRYCGRRYPPC
SIO_010081: LOC107324975
subclass of: SO_0000673
so part of: LOC107324975
location: 261239..261544
location: region:261239-261544:1
so has part: feature:261239-261544:1:exon

XP_015740901.1
type: Protein
SIO_000068: ncbiprotein

position:261239:1
position: 261239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261239-261544:1:exon

LOC107324971
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 269730..270738
location: region:269730-270738:1
so has part: feature:269730-270738:1:exon

107324971
type: Gene
SIO_000068: ncbigene

position:269730:1
position: 269730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270738:1
position: 270738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269730-270738:1:exon

LOC107324971
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC107324971
subclass of: SO_0000673
so part of: LOC107324971
location: 269730..269954
location: region:269730-269954:1
so has part: feature:269730-269954:1:exon

position:269954:1
position: 269954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269730-269954:1:exon

LOC107324971
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC107324971
subclass of: SO_0000673
so part of: LOC107324971
location: 270326..270738
location: region:270326-270738:1
so has part: feature:270326-270738:1:exon

position:270326:1
position: 270326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270326-270738:1:exon

LOC107324968
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281051..281408
location: region:281051-281408:1
so has part: feature:281051-281408:1:exon
subclass of: SO_0000010

107324968
type: Gene
SIO_000068: ncbigene

position:281051:1
position: 281051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281408:1
position: 281408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281051-281408:1:exon

LOC107324968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324968
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885409.2
SIO_010081: LOC107324968
subclass of: SO_0000673
so part of: LOC107324968
location: 281051..281408
location: region:281051-281408:1
so has part: feature:281051-281408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281051-281408:1:exon

LOC107324968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCYTQCVPCRPCGPTPLASSCNEPCVRQCQNSNVVVEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGFGSRYCGRRYPPC
SIO_010081: LOC107324968
subclass of: SO_0000673
so part of: LOC107324968
location: 281103..281408
location: region:281103-281408:1
so has part: feature:281103-281408:1:exon

XP_015740895.1
type: Protein
SIO_000068: ncbiprotein

position:281103:1
position: 281103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281103-281408:1:exon

LOC116654440
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(289326..292836)
location: region:289326-292836:-1
so has part: feature:289326-292836:-1:exon

116654440
type: Gene
SIO_000068: ncbigene

position:289326:-1
position: 289326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292836:-1
position: 292836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289326-292836:-1:exon

LOC116654440
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC116654440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116654440
subclass of: SO_0000673
so part of: LOC116654440
location: complement(289326..289622)
location: region:289326-289622:-1
so has part: feature:289326-289622:-1:exon

position:289622:-1
position: 289622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289326-289622:-1:exon

LOC116654440
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC116654440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116654440
subclass of: SO_0000673
so part of: LOC116654440
location: complement(289799..289955)
location: region:289799-289955:-1
so has part: feature:289799-289955:-1:exon

position:289799:-1
position: 289799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289955:-1
position: 289955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289799-289955:-1:exon

LOC116654440
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC116654440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116654440
subclass of: SO_0000673
so part of: LOC116654440
location: complement(292795..292836)
location: region:292795-292836:-1
so has part: feature:292795-292836:-1:exon

position:292795:-1
position: 292795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292795-292836:-1:exon

LOC107324974
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 293559..295895
location: region:293559-295895:1
so has part: feature:293559-295895:1:exon

107324974
type: Gene
SIO_000068: ncbigene

position:293559:1
position: 293559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295895:1
position: 295895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293559-295895:1:exon

LOC107324974
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107324974
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 65 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004309685.1
SIO_010081: LOC107324974
so part of: LOC107324974
location: join(293559..293700,295123..295141,295419..295895)
location: region:293559-295895:1
so has part: feature:293559-293700:1:exon
so has part: feature:295123-295141:1:exon
so has part: feature:295419-295895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293559-293700:1:exon

position:293700:1
position: 293700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295123-295141:1:exon

position:295123:1
position: 295123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295141:1
position: 295141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295419-295895:1:exon

position:295419:1
position: 295419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324973
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(300398..301332)
location: region:300398-301332:-1
so has part: feature:300398-301332:-1:exon

107324973
type: Gene
SIO_000068: ncbigene

position:300398:-1
position: 300398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301332:-1
position: 301332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300398-301332:-1:exon

LOC107324973
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324973
subclass of: SO_0000673
so part of: LOC107324973
location: complement(300398..300746)
location: region:300398-300746:-1
so has part: feature:300398-300746:-1:exon

position:300746:-1
position: 300746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300398-300746:-1:exon

LOC107324973
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324973
subclass of: SO_0000673
so part of: LOC107324973
location: complement(301100..301177)
location: region:301100-301177:-1
so has part: feature:301100-301177:-1:exon

position:301100:-1
position: 301100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301177:-1
position: 301177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301100-301177:-1:exon

LOC107324973
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324973
subclass of: SO_0000673
so part of: LOC107324973
location: complement(301324..301332)
location: region:301324-301332:-1
so has part: feature:301324-301332:-1:exon

position:301324:-1
position: 301324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301324-301332:-1:exon

LOC107324978
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309371..310544)
location: region:309371-310544:-1
so has part: feature:309371-310544:-1:exon
subclass of: SO_0000010

107324978
type: Gene
SIO_000068: ncbigene

position:309371:-1
position: 309371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310544:-1
position: 310544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309371-310544:-1:exon

LOC107324978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324978
product: feather keratin Cos1-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 35 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885418.2
SIO_010081: LOC107324978
subclass of: SO_0000673
so part of: LOC107324978
location: complement(join(309371..310104,310476..310544))
location: region:309371-310544:-1
so has part: feature:310476-310544:-1:exon
so has part: feature:309371-310104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310476-310544:-1:exon

position:310476:-1
position: 310476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309371-310104:-1:exon

position:310104:-1
position: 310104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-2-like
translation: MHYKRQPSSSLPHPPLLPSLWNQVQLQLQDMSCCDQCQPCQPCGPTPLASSCNEPCVRQCQPSTIVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSCEGVPISSGGLDLSCISNRYCGRRCPC
SIO_010081: LOC107324978
subclass of: SO_0000673
so part of: LOC107324978
location: complement(join(309781..310104,310476..310544))
location: region:309781-310544:-1
so has part: feature:310476-310544:-1:exon
so has part: feature:309781-310104:-1:exon

XP_015740904.1
type: Protein
SIO_000068: ncbiprotein

position:309781:-1
position: 309781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310476-310544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309781-310104:-1:exon

LOC107324972
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314530..315188
location: region:314530-315188:1
so has part: feature:314530-315188:1:exon
subclass of: SO_0000010

107324972
type: Gene
SIO_000068: ncbigene

position:314530:1
position: 314530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315188:1
position: 315188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314530-315188:1:exon

LOC107324972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324972
product: feather keratin Cos1-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 34 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032440914.1
SIO_010081: LOC107324972
subclass of: SO_0000673
so part of: LOC107324972
location: 314530..315188
location: region:314530-315188:1
so has part: feature:314530-315188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314530-315188:1:exon

LOC107324972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-2-like
translation: MSCCDQCQPCQPCGPTPLASSCNEPCVRQCQPSTIVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSCEGVPISSGGLDLSCISNRYCGRRCPC
SIO_010081: LOC107324972
subclass of: SO_0000673
so part of: LOC107324972
location: 314569..314871
location: region:314569-314871:1
so has part: feature:314569-314871:1:exon

XP_032296805.1
type: Protein
SIO_000068: ncbiprotein

position:314569:1
position: 314569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314871:1
position: 314871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314569-314871:1:exon

LOC107324976
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326062..326830)
location: region:326062-326830:-1
so has part: feature:326062-326830:-1:exon
subclass of: SO_0000010

107324976
type: Gene
SIO_000068: ncbigene

position:326062:-1
position: 326062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326830:-1
position: 326830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326062-326830:-1:exon

LOC107324976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324976
product: feather beta keratin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885417.1
SIO_010081: LOC107324976
subclass of: SO_0000673
so part of: LOC107324976
location: complement(join(326062..326369,326752..326830))
location: region:326062-326830:-1
so has part: feature:326752-326830:-1:exon
so has part: feature:326062-326369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326752-326830:-1:exon

position:326752:-1
position: 326752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326062-326369:-1:exon

position:326369:-1
position: 326369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather beta keratin-like isoform X2
translation: MRDEYKRHPNSQLSHPLLLLPSRWEPVMSCYTQCQPCRPCGPTPLASSCNEPCVRQCQNSNIIIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFNLSSFGSRYCGRRCNPC
SIO_010081: LOC107324976
subclass of: SO_0000673
so part of: LOC107324976
location: complement(join(326062..326369,326752..326830))
location: region:326062-326830:-1
so has part: feature:326752-326830:-1:exon
so has part: feature:326062-326369:-1:exon

XP_015740903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326752-326830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326062-326369:-1:exon

LOC107324976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324976
product: feather beta keratin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885416.1
SIO_010081: LOC107324976
subclass of: SO_0000673
so part of: LOC107324976
location: complement(join(326062..326388,326752..326823))
location: region:326062-326823:-1
so has part: feature:326752-326823:-1:exon
so has part: feature:326062-326388:-1:exon

position:326823:-1
position: 326823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326752-326823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326062-326388:-1:exon

position:326388:-1
position: 326388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather beta keratin-like isoform X1
translation: MSIKGIPIPSSPIHFSCFLLAGNQVYLQSQVMSCYTQCQPCRPCGPTPLASSCNEPCVRQCQNSNIIIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFNLSSFGSRYCGRRCNPC
SIO_010081: LOC107324976
subclass of: SO_0000673
so part of: LOC107324976
location: complement(join(326062..326388,326752..326823))
location: region:326062-326823:-1
so has part: feature:326752-326823:-1:exon
so has part: feature:326062-326388:-1:exon

XP_015740902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326752-326823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326062-326388:-1:exon

LOC107324979
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(332510..333675)
location: region:332510-333675:-1
so has part: feature:332510-333675:-1:exon

107324979
type: Gene
SIO_000068: ncbigene

position:332510:-1
position: 332510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333675:-1
position: 333675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332510-333675:-1:exon

LOC107324979
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324979
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324979
subclass of: SO_0000673
so part of: LOC107324979
location: complement(332510..333189)
location: region:332510-333189:-1
so has part: feature:332510-333189:-1:exon

position:333189:-1
position: 333189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332510-333189:-1:exon

LOC107324979
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324979
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324979
subclass of: SO_0000673
so part of: LOC107324979
location: complement(333574..333675)
location: region:333574-333675:-1
so has part: feature:333574-333675:-1:exon

position:333574:-1
position: 333574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333574-333675:-1:exon

LOC116654448
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(349360..350212)
location: region:349360-350212:-1
so has part: feature:349360-350212:-1:exon

116654448
type: Gene
SIO_000068: ncbigene

position:349360:-1
position: 349360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350212:-1
position: 350212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349360-350212:-1:exon

LOC116654448
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC116654448
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116654448
subclass of: SO_0000673
so part of: LOC116654448
location: complement(349360..349717)
location: region:349360-349717:-1
so has part: feature:349360-349717:-1:exon

position:349717:-1
position: 349717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349360-349717:-1:exon

LOC116654448
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC116654448
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116654448
subclass of: SO_0000673
so part of: LOC116654448
location: complement(350111..350212)
location: region:350111-350212:-1
so has part: feature:350111-350212:-1:exon

position:350111:-1
position: 350111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350111-350212:-1:exon

LOC107324982
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 353041..353936
location: region:353041-353936:1
so has part: feature:353041-353936:1:exon

107324982
type: Gene
SIO_000068: ncbigene

position:353041:1
position: 353041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353936:1
position: 353936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353041-353936:1:exon

LOC107324982
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324982
subclass of: SO_0000673
so part of: LOC107324982
location: 353041..353127
location: region:353041-353127:1
so has part: feature:353041-353127:1:exon

position:353127:1
position: 353127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353041-353127:1:exon

LOC107324982
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324982
subclass of: SO_0000673
so part of: LOC107324982
location: 353501..353936
location: region:353501-353936:1
so has part: feature:353501-353936:1:exon

position:353501:1
position: 353501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353501-353936:1:exon

LOC107324980
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358636..364657)
location: region:358636-364657:-1
so has part: feature:358636-364657:-1:exon
subclass of: SO_0000010

107324980
type: Gene
SIO_000068: ncbigene

position:358636:-1
position: 358636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364657:-1
position: 364657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358636-364657:-1:exon

LOC107324980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324980
product: feather keratin Cos1-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 31 Proteins
transcript id: XM_015885419.1
SIO_010081: LOC107324980
subclass of: SO_0000673
so part of: LOC107324980
location: complement(join(358636..359233,359605..359612,360315..360319,364654..364657))
location: region:358636-364657:-1
so has part: feature:364654-364657:-1:exon
so has part: feature:360315-360319:-1:exon
so has part: feature:359605-359612:-1:exon
so has part: feature:358636-359233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364654-364657:-1:exon

position:364654:-1
position: 364654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360315-360319:-1:exon

position:360315:-1
position: 360315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360319:-1
position: 360319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359605-359612:-1:exon

position:359605:-1
position: 359605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359612:-1
position: 359612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358636-359233:-1:exon

position:359233:-1
position: 359233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-2
translation: MSCCNPCVPCQPCGPTPLASSCNEPCVRQCQDSTIAIEPSPVVVILPGPILSSFPQNTVVGSSTSAAVGSILSCQGVPITSGGFDLSCISNRYCGRRCPC
SIO_010081: LOC107324980
subclass of: SO_0000673
so part of: LOC107324980
location: complement(358910..359212)
location: region:358910-359212:-1
so has part: feature:358910-359212:-1:exon

XP_015740905.1
type: Protein
SIO_000068: ncbiprotein

position:358910:-1
position: 358910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359212:-1
position: 359212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358910-359212:-1:exon

LOC107324981
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(370011..370809)
location: region:370011-370809:-1
so has part: feature:370011-370809:-1:exon
subclass of: SO_0000010

107324981
type: Gene
SIO_000068: ncbigene

position:370011:-1
position: 370011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370809:-1
position: 370809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370011-370809:-1:exon

LOC107324981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324981
product: feather keratin Cos1-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885421.2
SIO_010081: LOC107324981
subclass of: SO_0000673
so part of: LOC107324981
location: complement(join(370011..370334,370711..370809))
location: region:370011-370809:-1
so has part: feature:370711-370809:-1:exon
so has part: feature:370011-370334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370711-370809:-1:exon

position:370711:-1
position: 370711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370011-370334:-1:exon

position:370334:-1
position: 370334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-2-like
translation: MLQDIGHYKSIIKGSPAPCFLTHYSSHLLLQNQVHVHPQDMSCCNPCVPCQPCGPTPLASSCNEPCVRQCQDSTIAIEPSPVVVILPGPILSSFPQNTVVGSSTSAAVGSILSCQGVPITSGGFDLSCISNRYCGRRCPC
SIO_010081: LOC107324981
subclass of: SO_0000673
so part of: LOC107324981
location: complement(join(370011..370334,370711..370809))
location: region:370011-370809:-1
so has part: feature:370711-370809:-1:exon
so has part: feature:370011-370334:-1:exon

XP_015740907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370711-370809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370011-370334:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 93934
estimated length: 100
gap type: between scaffolds
so part of: sequence
location: 376591..376690
location: region:376591-376690:1
so has part: feature:376591-376690:1:region

position:376591:1
position: 376591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376690:1
position: 376690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376591-376690:1:region

LOC107325004
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(394649..395447)
location: region:394649-395447:-1
so has part: feature:394649-395447:-1:exon
subclass of: SO_0000010

107325004
type: Gene
SIO_000068: ncbigene

position:394649:-1
position: 394649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395447:-1
position: 395447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394649-395447:-1:exon

LOC107325004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325004
product: feather keratin Cos1-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885439.2
SIO_010081: LOC107325004
subclass of: SO_0000673
so part of: LOC107325004
location: complement(join(394649..394972,395349..395447))
location: region:394649-395447:-1
so has part: feature:395349-395447:-1:exon
so has part: feature:394649-394972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395349-395447:-1:exon

position:395349:-1
position: 395349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394649-394972:-1:exon

position:394972:-1
position: 394972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-2-like
translation: MLQDIGHYKSIIKGSPAPCFLTHYSSHLLLQNQVHVHPQDMSCCNPCVPCQPCGPTPLASSCNEPCVRQCQDSTIAIEPSPVVVILPGPILSSFPQNTVVGSSTSAAVGSILSCQGVPITSGGFDLSCISNRYCGRRCPC
SIO_010081: LOC107325004
subclass of: SO_0000673
so part of: LOC107325004
location: complement(join(394649..394972,395349..395447))
location: region:394649-395447:-1
so has part: feature:395349-395447:-1:exon
so has part: feature:394649-394972:-1:exon

XP_015740925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395349-395447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394649-394972:-1:exon

LOC107324984
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 399986..401425
location: region:399986-401425:1
so has part: feature:399986-401425:1:exon

107324984
type: Gene
SIO_000068: ncbigene

position:399986:1
position: 399986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401425:1
position: 401425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399986-401425:1:exon

LOC107324984
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324984
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324984
subclass of: SO_0000673
so part of: LOC107324984
location: 399986..400031
location: region:399986-400031:1
so has part: feature:399986-400031:1:exon

position:400031:1
position: 400031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399986-400031:1:exon

LOC107324984
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324984
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324984
subclass of: SO_0000673
so part of: LOC107324984
location: 400633..400730
location: region:400633-400730:1
so has part: feature:400633-400730:1:exon

position:400633:1
position: 400633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400730:1
position: 400730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400633-400730:1:exon

LOC107324984
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107324984
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107324984
subclass of: SO_0000673
so part of: LOC107324984
location: 401102..401425
location: region:401102-401425:1
so has part: feature:401102-401425:1:exon

position:401102:1
position: 401102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401102-401425:1:exon

LOC107324985
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 402446..427623
location: region:402446-427623:1
so has part: feature:402446-427623:1:exon
subclass of: SO_0000010

107324985
type: Gene
SIO_000068: ncbigene

position:402446:1
position: 402446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427623:1
position: 427623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402446-427623:1:exon

LOC107324985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324985
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885423.2
SIO_010081: LOC107324985
subclass of: SO_0000673
so part of: LOC107324985
location: join(402446..402501,426852..426951,427306..427623)
location: region:402446-427623:1
so has part: feature:402446-402501:1:exon
so has part: feature:426852-426951:1:exon
so has part: feature:427306-427623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402446-402501:1:exon

position:402501:1
position: 402501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426852-426951:1:exon

position:426852:1
position: 426852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426951:1
position: 426951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427306-427623:1:exon

position:427306:1
position: 427306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MRFNKTKCRVLHFGYNNPRVPLGLQQRRTSIKGSPIPSSPINFSCLALLGNRVYLQYQDMSCYSQCVPCRPCGPTPLASSCNEPCVRQCQNSNVVIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGFGSRYCGRRR
SIO_010081: LOC107324985
subclass of: SO_0000673
so part of: LOC107324985
location: join(402446..402501,426852..426951,427306..427623)
location: region:402446-427623:1
so has part: feature:402446-402501:1:exon
so has part: feature:426852-426951:1:exon
so has part: feature:427306-427623:1:exon

XP_015740909.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402446-402501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426852-426951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427306-427623:1:exon

LOC107324999
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429150..429488
location: region:429150-429488:1
so has part: feature:429150-429488:1:exon
subclass of: SO_0000010

107324999
type: Gene
SIO_000068: ncbigene

position:429150:1
position: 429150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429488:1
position: 429488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429150-429488:1:exon

LOC107324999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324999
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885435.1
SIO_010081: LOC107324999
subclass of: SO_0000673
so part of: LOC107324999
location: 429150..429488
location: region:429150-429488:1
so has part: feature:429150-429488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429150-429488:1:exon

LOC107324999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCLPRLPCQPCGPTPLANSCNEPCFRQCQDSNVFIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGLGSRYSSRRFFPC
SIO_010081: LOC107324999
subclass of: SO_0000673
so part of: LOC107324999
location: 429174..429488
location: region:429174-429488:1
so has part: feature:429174-429488:1:exon

XP_015740921.1
type: Protein
SIO_000068: ncbiprotein

position:429174:1
position: 429174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429174-429488:1:exon

LOC107324994
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442649..443357
location: region:442649-443357:1
so has part: feature:442649-443357:1:exon
subclass of: SO_0000010

107324994
type: Gene
SIO_000068: ncbigene

position:442649:1
position: 442649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443357:1
position: 443357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442649-443357:1:exon

LOC107324994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324994
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885431.2
SIO_010081: LOC107324994
subclass of: SO_0000673
so part of: LOC107324994
location: 442649..443357
location: region:442649-443357:1
so has part: feature:442649-443357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442649-443357:1:exon

LOC107324994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCLPRLQCQPCGPTPLANSCNEPCVRQCQDSHVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGFGSRFCGRRCFPC
SIO_010081: LOC107324994
subclass of: SO_0000673
so part of: LOC107324994
location: 442690..443004
location: region:442690-443004:1
so has part: feature:442690-443004:1:exon

XP_015740917.1
type: Protein
SIO_000068: ncbiprotein

position:442690:1
position: 442690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443004:1
position: 443004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442690-443004:1:exon

LOC107324996
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(450065..450434)
location: region:450065-450434:-1
so has part: feature:450065-450434:-1:exon
subclass of: SO_0000010

107324996
type: Gene
SIO_000068: ncbigene

position:450065:-1
position: 450065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450434:-1
position: 450434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450065-450434:-1:exon

LOC107324996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324996
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885432.2
SIO_010081: LOC107324996
subclass of: SO_0000673
so part of: LOC107324996
location: complement(450065..450434)
location: region:450065-450434:-1
so has part: feature:450065-450434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450065-450434:-1:exon

LOC107324996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCLDQCLPRLQCRPCGPTPLANSCNEPCVRQCQDSHVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGFGSRFCGRRCFPC
SIO_010081: LOC107324996
subclass of: SO_0000673
so part of: LOC107324996
location: complement(450090..450404)
location: region:450090-450404:-1
so has part: feature:450090-450404:-1:exon

XP_015740918.1
type: Protein
SIO_000068: ncbiprotein

position:450090:-1
position: 450090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450404:-1
position: 450404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450090-450404:-1:exon

LOC107325002
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(465520..466463)
location: region:465520-466463:-1
so has part: feature:465520-466463:-1:exon
subclass of: SO_0000010

107325002
type: Gene
SIO_000068: ncbigene

position:465520:-1
position: 465520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466463:-1
position: 466463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465520-466463:-1:exon

LOC107325002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325002
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885438.2
SIO_010081: LOC107325002
subclass of: SO_0000673
so part of: LOC107325002
location: complement(465520..466463)
location: region:465520-466463:-1
so has part: feature:465520-466463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465520-466463:-1:exon

LOC107325002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCLDQCLPRLPCQPCGPTPLANSCNEPCFRQCQDSNVFIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGLGSRYSSRRFFPC
SIO_010081: LOC107325002
subclass of: SO_0000673
so part of: LOC107325002
location: complement(465868..466182)
location: region:465868-466182:-1
so has part: feature:465868-466182:-1:exon

XP_015740924.1
type: Protein
SIO_000068: ncbiprotein

position:465868:-1
position: 465868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466182:-1
position: 466182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465868-466182:-1:exon

LOC107324997
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467781..468472)
location: region:467781-468472:-1
so has part: feature:467781-468472:-1:exon
subclass of: SO_0000010

107324997
type: Gene
SIO_000068: ncbigene

position:467781:-1
position: 467781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468472:-1
position: 468472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467781-468472:-1:exon

LOC107324997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324997
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885433.2
SIO_010081: LOC107324997
subclass of: SO_0000673
so part of: LOC107324997
location: complement(467781..468472)
location: region:467781-468472:-1
so has part: feature:467781-468472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467781-468472:-1:exon

LOC107324997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCLDQCLPRLPCQPCGPTPLANSCNEPCVRQCQDSNVFIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGLGSRYSSRRFFPC
SIO_010081: LOC107324997
subclass of: SO_0000673
so part of: LOC107324997
location: complement(468139..468453)
location: region:468139-468453:-1
so has part: feature:468139-468453:-1:exon

XP_015740919.1
type: Protein
SIO_000068: ncbiprotein

position:468139:-1
position: 468139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468453:-1
position: 468453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468139-468453:-1:exon

LOC107324998
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 511058..511384
location: region:511058-511384:1
so has part: feature:511058-511384:1:exon
subclass of: SO_0000010

107324998
type: Gene
SIO_000068: ncbigene

position:511058:1
position: 511058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511384:1
position: 511384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511058-511384:1:exon

LOC107324998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324998
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885434.2
SIO_010081: LOC107324998
subclass of: SO_0000673
so part of: LOC107324998
location: 511058..511384
location: region:511058-511384:1
so has part: feature:511058-511384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511058-511384:1:exon

LOC107324998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCLPRLPCQPCGPTPLANSCNEPCVRQCQDSHVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGLGSRYSSRNFFPC
SIO_010081: LOC107324998
subclass of: SO_0000673
so part of: LOC107324998
location: 511070..511384
location: region:511070-511384:1
so has part: feature:511070-511384:1:exon

XP_015740920.1
type: Protein
SIO_000068: ncbiprotein

position:511070:1
position: 511070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511070-511384:1:exon

LOC107325032
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(515389..534870)
location: region:515389-534870:-1
so has part: feature:515389-534870:-1:exon
subclass of: SO_0000010

107325032
type: Gene
SIO_000068: ncbigene

position:515389:-1
position: 515389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534870:-1
position: 534870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515389-534870:-1:exon

LOC107325032
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107325032
product: feather keratin 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004309697.1
SIO_010081: LOC107325032
so part of: LOC107325032
location: complement(join(515389..515538,534626..534870))
location: region:515389-534870:-1
so has part: feature:534626-534870:-1:exon
so has part: feature:515389-515538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534626-534870:-1:exon

position:534626:-1
position: 534626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515389-515538:-1:exon

position:515538:-1
position: 515538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324987
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 516376..520152
location: region:516376-520152:1
so has part: feature:516376-520152:1:exon
subclass of: SO_0000010

107324987
type: Gene
SIO_000068: ncbigene

position:516376:1
position: 516376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520152:1
position: 520152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516376-520152:1:exon

LOC107324987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324987
product: feather beta keratin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449406.1
SIO_010081: LOC107324987
subclass of: SO_0000673
so part of: LOC107324987
location: join(516376..517338,519010..520152)
location: region:516376-520152:1
so has part: feature:516376-517338:1:exon
so has part: feature:519010-520152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516376-517338:1:exon

position:517338:1
position: 517338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519010-520152:1:exon

position:519010:1
position: 519010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather beta keratin-like
translation: MCQEMILMMHCYIVCPPGPLSQQVPLQTQDTSCYDQCLPRLPCQPCGPTPLASSCNEPCVRQCQNSTIVIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPISSGGFGLSGLNSRYSSRRFFPC
SIO_010081: LOC107324987
subclass of: SO_0000673
so part of: LOC107324987
location: join(517302..517338,519010..519377)
location: region:517302-519377:1
so has part: feature:517302-517338:1:exon
so has part: feature:519010-519377:1:exon

XP_032305297.1
type: Protein
SIO_000068: ncbiprotein

position:517302:1
position: 517302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519377:1
position: 519377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517302-517338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519010-519377:1:exon

LOC107325032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325032
product: feather keratin 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015885508.2
SIO_010081: LOC107325032
subclass of: SO_0000673
so part of: LOC107325032
location: complement(join(524943..525627,534626..534870))
location: region:524943-534870:-1
so has part: feature:534626-534870:-1:exon
so has part: feature:524943-525627:-1:exon

position:524943:-1
position: 524943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534626-534870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524943-525627:-1:exon

position:525627:-1
position: 525627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCLPCQPCGPTPLANSCNEPCVRQCQDSNVFIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGLGSRYSSRRFFPC
SIO_010081: LOC107325032
subclass of: SO_0000673
so part of: LOC107325032
location: complement(525301..525606)
location: region:525301-525606:-1
so has part: feature:525301-525606:-1:exon

XP_015740994.1
type: Protein
SIO_000068: ncbiprotein

position:525301:-1
position: 525301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525606:-1
position: 525606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525301-525606:-1:exon

LOC107325033
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 529160..529489
location: region:529160-529489:1
so has part: feature:529160-529489:1:exon
subclass of: SO_0000010

107325033
type: Gene
SIO_000068: ncbigene

position:529160:1
position: 529160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529489:1
position: 529489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529160-529489:1:exon

LOC107325033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325033
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885510.1
SIO_010081: LOC107325033
subclass of: SO_0000673
so part of: LOC107325033
location: 529160..529489
location: region:529160-529489:1
so has part: feature:529160-529489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529160-529489:1:exon

LOC107325033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin Cos1-1/Cos1-3/Cos2-1-like
translation: MSCCNPCVPCQPCGPTPLANSCNEPCVRQCQDSQVVIQPSTVVVTLPGPILSSFPQNTAVGSSSSAAVGSALSAQGVPISSGGFDLSCIGSRYCGRRCFPC
SIO_010081: LOC107325033
subclass of: SO_0000673
so part of: LOC107325033
location: 529184..529489
location: region:529184-529489:1
so has part: feature:529184-529489:1:exon

XP_015740996.1
type: Protein
SIO_000068: ncbiprotein

position:529184:1
position: 529184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529184-529489:1:exon

LOC107325032
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107325032
product: feather keratin 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001559606.2
SIO_010081: LOC107325032
so part of: LOC107325032
location: complement(join(529501..532839,534626..534870))
location: region:529501-534870:-1
so has part: feature:534626-534870:-1:exon
so has part: feature:529501-532839:-1:exon

position:529501:-1
position: 529501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534626-534870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529501-532839:-1:exon

position:532839:-1
position: 532839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325031
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534874..544622
location: region:534874-544622:1
so has part: feature:534874-544622:1:exon
subclass of: SO_0000010

107325031
type: Gene
SIO_000068: ncbigene

position:534874:1
position: 534874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544622:1
position: 544622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534874-544622:1:exon

LOC107325031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_015885504.1
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,541743..541829,542282..542342,543188..543276,543993..544622)
location: region:534874-544622:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541829:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543188-543276:1:exon
so has part: feature:543993-544622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

position:535011:1
position: 535011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

position:539386:1
position: 539386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539477:1
position: 539477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

position:540694:1
position: 540694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540820:1
position: 540820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541829:1:exon

position:541743:1
position: 541743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541829:1
position: 541829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

position:542282:1
position: 542282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542342:1
position: 542342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543188-543276:1:exon

position:543188:1
position: 543188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543276:1
position: 543276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:543993-544622:1:exon

position:543993:1
position: 543993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_015885505.1
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,541743..541829,542282..542342,543194..543276,543993..544622)
location: region:534874-544622:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541829:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543194-543276:1:exon
so has part: feature:543993-544622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543194-543276:1:exon

position:543194:1
position: 543194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:543993-544622:1:exon

LOC107325031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015885506.1
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,542282..542342,543188..543276,543993..544622)
location: region:534874-544622:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543188-543276:1:exon
so has part: feature:543993-544622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543188-543276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543993-544622:1:exon

LOC107325031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015885507.1
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,542282..542342,543194..543276,543993..544622)
location: region:534874-544622:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543194-543276:1:exon
so has part: feature:543993-544622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543194-543276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543993-544622:1:exon

LOC107325031
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_004309695.1
SIO_010081: LOC107325031
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,541743..541912,542282..542342,543188..543251)
location: region:534874-543251:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541912:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543188-543251:1:exon

position:543251:1
position: 543251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541912:1:exon

position:541912:1
position: 541912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543188-543251:1:exon

LOC107325031
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107325031
product: gametocyte-specific factor 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_004309696.1
SIO_010081: LOC107325031
so part of: LOC107325031
location: join(534874..535011,539386..539477,540694..540820,541743..541912,542282..542342,543194..543239)
location: region:534874-543239:1
so has part: feature:534874-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541912:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543194-543239:1:exon

position:543239:1
position: 543239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534874-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543194-543239:1:exon

LOC107325031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X1
translation: MEAEDDLDDPERLIQCPYDKQHQIRACRFPYHLVKCRRSHPEVAKLLATCPFNARHLVPQADLADHISKCRDKVFIEYDIACCSSGLQRDEVNAVSTWQAPPCDEDWETELLEQPNSPFVWGMTNSGMNSCSVTSGQKNYLPSSVRAPESFPYTASWKE
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534990..535011,539386..539477,540694..540820,541743..541829,542282..542342,543188..543276,543993..543994)
location: region:534990-543994:1
so has part: feature:534990-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541829:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543188-543276:1:exon
so has part: feature:543993-543994:1:exon

XP_015740990.1
type: Protein
SIO_000068: ncbiprotein

position:534990:1
position: 534990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543994:1
position: 543994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534990-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543188-543276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543993-543994:1:exon

LOC107325031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X2
translation: MEAEDDLDDPERLIQCPYDKQHQIRACRFPYHLVKCRRSHPEVAKLLATCPFNARHLVPQADLADHISKCRDKVFIEYDIACCSSGLQRDEVNAVSTWQAPPCDEDWETELLEQPNSPFVWGMTNSGMNSVTSGQKNYLPSSVRAPESFPYTASWKE
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534990..535011,539386..539477,540694..540820,541743..541829,542282..542342,543194..543276,543993..543994)
location: region:534990-543994:1
so has part: feature:534990-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:541743-541829:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543194-543276:1:exon
so has part: feature:543993-543994:1:exon

XP_015740991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534990-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541743-541829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543194-543276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543993-543994:1:exon

LOC107325031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X3
translation: MEAEDDLDDPERLIQCPYDKQHQIRACRFPYHLVKCRRSHPEVAKLLATCPFNARHLVPQADLADHISKCRDKVFIEYDIELLEQPNSPFVWGMTNSGMNSCSVTSGQKNYLPSSVRAPESFPYTASWKE
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534990..535011,539386..539477,540694..540820,542282..542342,543188..543276,543993..543994)
location: region:534990-543994:1
so has part: feature:534990-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543188-543276:1:exon
so has part: feature:543993-543994:1:exon

XP_015740992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534990-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543188-543276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543993-543994:1:exon

LOC107325031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X4
translation: MEAEDDLDDPERLIQCPYDKQHQIRACRFPYHLVKCRRSHPEVAKLLATCPFNARHLVPQADLADHISKCRDKVFIEYDIELLEQPNSPFVWGMTNSGMNSVTSGQKNYLPSSVRAPESFPYTASWKE
SIO_010081: LOC107325031
subclass of: SO_0000673
so part of: LOC107325031
location: join(534990..535011,539386..539477,540694..540820,542282..542342,543194..543276,543993..543994)
location: region:534990-543994:1
so has part: feature:534990-535011:1:exon
so has part: feature:539386-539477:1:exon
so has part: feature:540694-540820:1:exon
so has part: feature:542282-542342:1:exon
so has part: feature:543194-543276:1:exon
so has part: feature:543993-543994:1:exon

XP_015740993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534990-535011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539386-539477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540694-540820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542282-542342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543194-543276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543993-543994:1:exon

GOSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(551116..564463)
location: region:551116-564463:-1
so has part: feature:551116-564463:-1:exon
subclass of: SO_0000010

107325027
type: Gene
SIO_000068: ncbigene

position:551116:-1
position: 551116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564463:-1
position: 564463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551116-564463:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XM_015885486.2
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,556278..556418,558255..558387,559319..559427,562378..562442,564334..564463))
location: region:551116-564463:-1
so has part: feature:564334-564463:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:551116-554295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564463:-1:exon

position:564334:-1
position: 564334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

position:562378:-1
position: 562378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562442:-1
position: 562442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559427:-1:exon

position:559319:-1
position: 559319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559427:-1
position: 559427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

position:558255:-1
position: 558255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558387:-1
position: 558387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

position:556278:-1
position: 556278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556418:-1
position: 556418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551116-554295:-1:exon

position:554295:-1
position: 554295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032449405.1
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,558255..558387,559319..559424,562378..562442,564334..564457))
location: region:551116-564457:-1
so has part: feature:564334-564457:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:551116-554295:-1:exon

position:564457:-1
position: 564457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559424:-1:exon

position:559424:-1
position: 559424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551116-554295:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_032449404.1
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,558255..558387,559319..559427,562378..562442,564334..564457))
location: region:551116-564457:-1
so has part: feature:564334-564457:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:551116-554295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551116-554295:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032449402.1
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,556278..556418,558255..558387,559319..559424,562378..562442,564334..564456))
location: region:551116-564456:-1
so has part: feature:564334-564456:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:551116-554295:-1:exon

position:564456:-1
position: 564456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551116-554295:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032449403.1
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,556278..556418,558255..558387,559319..559424,562378..562442,563443..564248))
location: region:551116-564248:-1
so has part: feature:563443-564248:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:551116-554295:-1:exon

position:564248:-1
position: 564248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563443-564248:-1:exon

position:563443:-1
position: 563443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551116-554295:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_015885487.2
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(551116..554295,556278..556418,558255..558387,559319..559427,562378..562442,563443..564234))
location: region:551116-564234:-1
so has part: feature:563443-564234:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:551116-554295:-1:exon

position:564234:-1
position: 564234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563443-564234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551116-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X6
translation: MEALYHQTNKQVHEVQSYMGRLETSDKESVHLENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,558255..558387,559319..559424,562378..562442,564334..564362))
location: region:554134-564362:-1
so has part: feature:564334-564362:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:554134-554295:-1:exon

XP_032305296.1
type: Protein
SIO_000068: ncbiprotein

position:554134:-1
position: 554134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564362:-1
position: 564362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554134-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X2
translation: MEALYHQTNKQVHEVQSYMGRLETSDKESVHLENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNDSDTTIPIDETLQFNESLQNAHRGMDDLIGSGTNILQGLRDQRLTLKGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,556278..556418,558255..558387,559319..559424,562378..562442,564334..564362))
location: region:554134-564362:-1
so has part: feature:564334-564362:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:554134-554295:-1:exon

XP_032305293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554134-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X5
translation: MEALYHQTNKQVHEVQSYMGRLETSDKESVHLVENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,558255..558387,559319..559427,562378..562442,564334..564362))
location: region:554134-564362:-1
so has part: feature:564334-564362:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:554134-554295:-1:exon

XP_032305295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554134-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X1
translation: MEALYHQTNKQVHEVQSYMGRLETSDKESVHLVENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNDSDTTIPIDETLQFNESLQNAHRGMDDLIGSGTNILQGLRDQRLTLKGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,556278..556418,558255..558387,559319..559427,562378..562442,564334..564362))
location: region:554134-564362:-1
so has part: feature:564334-564362:-1:exon
so has part: feature:562378-562442:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:554134-554295:-1:exon

XP_015740972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564334-564362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562378-562442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559319-559427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554134-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X4
translation: MGRLETSDKESVHLENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNDSDTTIPIDETLQFNESLQNAHRGMDDLIGSGTNILQGLRDQRLTLKGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,556278..556418,558255..558387,559319..559424,562378..562417))
location: region:554134-562417:-1
so has part: feature:562378-562417:-1:exon
so has part: feature:559319-559424:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:554134-554295:-1:exon

XP_032305294.1
type: Protein
SIO_000068: ncbiprotein

position:562417:-1
position: 562417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562378-562417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559319-559424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554134-554295:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X3
translation: MGRLETSDKESVHLVENEIQARIDKVFSDLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNDSDTTIPIDETLQFNESLQNAHRGMDDLIGSGTNILQGLRDQRLTLKGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYFMIGGMIVTCLVMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(554134..554295,556278..556418,558255..558387,559319..559427,562378..562417))
location: region:554134-562417:-1
so has part: feature:562378-562417:-1:exon
so has part: feature:559319-559427:-1:exon
so has part: feature:558255-558387:-1:exon
so has part: feature:556278-556418:-1:exon
so has part: feature:554134-554295:-1:exon

XP_015740973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562378-562417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559319-559427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558255-558387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556278-556418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554134-554295:-1:exon

WNT9B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: WNT9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(587452..599071)
location: region:587452-599071:-1
so has part: feature:587452-599071:-1:exon
subclass of: SO_0000010

107324983
type: Gene
SIO_000068: ncbigene

position:587452:-1
position: 587452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599071:-1
position: 599071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587452-599071:-1:exon

WNT9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: WNT9B
product: Wnt family member 9B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015885422.2
SIO_010081: WNT9B
subclass of: SO_0000673
so part of: WNT9B
location: complement(join(587452..588798,589577..589842,593904..594160,598950..599071))
location: region:587452-599071:-1
so has part: feature:598950-599071:-1:exon
so has part: feature:593904-594160:-1:exon
so has part: feature:589577-589842:-1:exon
so has part: feature:587452-588798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598950-599071:-1:exon

position:598950:-1
position: 598950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593904-594160:-1:exon

position:593904:-1
position: 593904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594160:-1
position: 594160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589577-589842:-1:exon

position:589577:-1
position: 589577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589842:-1
position: 589842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587452-588798:-1:exon

position:588798:-1
position: 588798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: WNT9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-9b
translation: MRAAVCRLFLLLLLLLLLLLLPPPPAAAYFGLTGKEALTHFPSLGTSTNSAQGKAHMKQCDLLKLSRKQKRLCRREPGLAETLRDAIRLGIMECQFQFRSERWNCSLEGRTSLLKRGFKETAFLYAVSSAALTHSLARACSAGRMERCTCDDSPDLENRKAWQWGVCGDNLKYSTKFLKKFLGQKRIGKDLRAKVDIHNTNVGIKAVKNGLKTTCKCHGVSGSCAVRTCWKQLSPFHEIGRLLKLRYDDAVKVFSTTNDAVGHSELASPQRHSHSTKHHASPRATDLVYVEDSPSFCRPSKYSLGTAGRTCSREGNCDSMCCGRGYNTQSHLVTFSCHCQVQWCCYVECQQCMQEEVVYSCKQ
SIO_010081: WNT9B
subclass of: SO_0000673
so part of: WNT9B
location: complement(join(588322..588798,589577..589842,593904..594160,598950..599041))
location: region:588322-599041:-1
so has part: feature:598950-599041:-1:exon
so has part: feature:593904-594160:-1:exon
so has part: feature:589577-589842:-1:exon
so has part: feature:588322-588798:-1:exon

XP_015740908.2
type: Protein
SIO_000068: ncbiprotein

position:588322:-1
position: 588322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599041:-1
position: 599041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598950-599041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593904-594160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589577-589842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588322-588798:-1:exon

WNT3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: WNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 612183..634038
location: region:612183-634038:1
so has part: feature:612183-634038:1:exon
subclass of: SO_0000010

107325013
type: Gene
SIO_000068: ncbigene

position:612183:1
position: 612183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634038:1
position: 634038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612183-634038:1:exon

WNT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: WNT3
product: Wnt family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015885459.2
SIO_010081: WNT3
subclass of: SO_0000673
so part of: WNT3
location: join(612183..612490,625721..625962,631071..631336,632621..634038)
location: region:612183-634038:1
so has part: feature:612183-612490:1:exon
so has part: feature:625721-625962:1:exon
so has part: feature:631071-631336:1:exon
so has part: feature:632621-634038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612183-612490:1:exon

position:612490:1
position: 612490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625721-625962:1:exon

position:625721:1
position: 625721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625962:1
position: 625962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631071-631336:1:exon

position:631071:1
position: 631071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631336:1
position: 631336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632621-634038:1:exon

position:632621:1
position: 632621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: WNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene Wnt-3
translation: MIYGEEAWRGVFLTSHKVIRTSRDFVSLFLIFFLIFFFFNFFFSFFFWKGGLFFILTLNVLLKTSRRFSPLHQRGLMDYHLLGLILSFLFNGTKVLAGYPIWWSLALGQQYSSLGSQPILCGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCTTIDDSLAIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHKGPPGEGWKWGGCSEDADFGVLVSREFADARENRPDARSAMNRHNNEAGRTTILDHMHLKCKCHGLSGSCEVKTCWWAQPDFRAIGDYLKDKYDSASEMVVEKHRESRGWVETLRAKYALFKPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECIRVYDVHTCK
SIO_010081: WNT3
subclass of: SO_0000673
so part of: WNT3
location: join(612183..612490,625721..625962,631071..631336,632621..633100)
location: region:612183-633100:1
so has part: feature:612183-612490:1:exon
so has part: feature:625721-625962:1:exon
so has part: feature:631071-631336:1:exon
so has part: feature:632621-633100:1:exon

XP_015740945.2
type: Protein
SIO_000068: ncbiprotein

position:633100:1
position: 633100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612183-612490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625721-625962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631071-631336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632621-633100:1:exon

NSF
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635001..690710)
location: region:635001-690710:-1
so has part: feature:635001-690710:-1:exon
subclass of: SO_0000010

107325012
type: Gene
SIO_000068: ncbigene

position:635001:-1
position: 635001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690710:-1
position: 690710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635001-690710:-1:exon

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015885458.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(635001..636478,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,689459..689587,690618..690710))
location: region:635001-690710:-1
so has part: feature:690618-690710:-1:exon
so has part: feature:689459-689587:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:635001-636478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690618-690710:-1:exon

position:690618:-1
position: 690618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:689459-689587:-1:exon

position:689459:-1
position: 689459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689587:-1
position: 689587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682145-682230:-1:exon

position:682145:-1
position: 682145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682230:-1
position: 682230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:677203-677302:-1:exon

position:677203:-1
position: 677203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677302:-1
position: 677302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:675301-675340:-1:exon

position:675301:-1
position: 675301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675340:-1
position: 675340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671644-671810:-1:exon

position:671644:-1
position: 671644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671810:-1
position: 671810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:670969-671076:-1:exon

position:670969:-1
position: 670969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671076:-1
position: 671076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:670264-670339:-1:exon

position:670264:-1
position: 670264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670339:-1
position: 670339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:667017-667172:-1:exon

position:667017:-1
position: 667017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667172:-1
position: 667172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:657898-658097:-1:exon

position:657898:-1
position: 657898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658097:-1
position: 658097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:656041-656206:-1:exon

position:656041:-1
position: 656041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656206:-1
position: 656206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:655706-655780:-1:exon

position:655706:-1
position: 655706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655780:-1
position: 655780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:654156-654343:-1:exon

position:654156:-1
position: 654156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654343:-1
position: 654343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:651539-651634:-1:exon

position:651539:-1
position: 651539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651634:-1
position: 651634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:651185-651341:-1:exon

position:651185:-1
position: 651185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651341:-1
position: 651341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:650501-650634:-1:exon

position:650501:-1
position: 650501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650634:-1
position: 650634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:649270-649336:-1:exon

position:649270:-1
position: 649270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649336:-1
position: 649336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:649050-649129:-1:exon

position:649050:-1
position: 649050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649129:-1
position: 649129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:642957-643091:-1:exon

position:642957:-1
position: 642957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643091:-1
position: 643091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:642341-642454:-1:exon

position:642341:-1
position: 642341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642454:-1
position: 642454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:636994-637049:-1:exon

position:636994:-1
position: 636994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637049:-1
position: 637049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:635001-636478:-1:exon

position:636478:-1
position: 636478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 33 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_015885457.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(635001..636480,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,689239..689341))
location: region:635001-689341:-1
so has part: feature:689239-689341:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:635001-636480:-1:exon

position:689341:-1
position: 689341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689239-689341:-1:exon

position:689239:-1
position: 689239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:635001-636480:-1:exon

position:636480:-1
position: 636480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_015885455.1
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(635001..636480,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,688325..688408))
location: region:635001-688408:-1
so has part: feature:688325-688408:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:635001-636480:-1:exon

position:688408:-1
position: 688408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688325-688408:-1:exon

position:688325:-1
position: 688325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:635001-636480:-1:exon

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_015885456.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(635001..636478,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,683666..683755))
location: region:635001-683755:-1
so has part: feature:683666-683755:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:635001-636478:-1:exon

position:683755:-1
position: 683755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683666-683755:-1:exon

position:683666:-1
position: 683666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:635001-636478:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X4
translation: MDGQQEALLHKNNALGPKIRLQVCKIRHQPMQAARCPTDELSLTNCAVVNDADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGETGASKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKPVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTSLD
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(636466..636478,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,689459..689545))
location: region:636466-689545:-1
so has part: feature:689459-689545:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:636466-636478:-1:exon

XP_015740944.1
type: Protein
SIO_000068: ncbiprotein

position:636466:-1
position: 636466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689545:-1
position: 689545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689459-689545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:636466-636478:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X2
translation: MPRSLSMALIFMPWCWILTLYISIRGINPRPMQAARCPTDELSLTNCAVVNDADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGETGASKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKPVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTSLD
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(636466..636478,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,683666..683755))
location: region:636466-683755:-1
so has part: feature:683666-683755:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:636466-636478:-1:exon

XP_015740942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683666-683755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:636466-636478:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X3
translation: MAGRPMQAARCPTDELSLTNCAVVNDADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGETGASKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKPVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(636471..636480,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,689239..689250))
location: region:636471-689250:-1
so has part: feature:689239-689250:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:636471-636480:-1:exon

XP_015740943.1
type: Protein
SIO_000068: ncbiprotein

position:636471:-1
position: 636471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689250:-1
position: 689250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689239-689250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:636471-636480:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X1
translation: MLVCINKEQCVGGWRCVISPLQQPMQAARCPTDELSLTNCAVVNDADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGETGASKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKPVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(636471..636480,636994..637049,642341..642454,642957..643091,649050..649129,649270..649336,650501..650634,651185..651341,651539..651634,654156..654343,655706..655780,656041..656206,657898..658097,667017..667172,670264..670339,670969..671076,671644..671810,675301..675340,677203..677302,682145..682230,688325..688393))
location: region:636471-688393:-1
so has part: feature:688325-688393:-1:exon
so has part: feature:682145-682230:-1:exon
so has part: feature:677203-677302:-1:exon
so has part: feature:675301-675340:-1:exon
so has part: feature:671644-671810:-1:exon
so has part: feature:670969-671076:-1:exon
so has part: feature:670264-670339:-1:exon
so has part: feature:667017-667172:-1:exon
so has part: feature:657898-658097:-1:exon
so has part: feature:656041-656206:-1:exon
so has part: feature:655706-655780:-1:exon
so has part: feature:654156-654343:-1:exon
so has part: feature:651539-651634:-1:exon
so has part: feature:651185-651341:-1:exon
so has part: feature:650501-650634:-1:exon
so has part: feature:649270-649336:-1:exon
so has part: feature:649050-649129:-1:exon
so has part: feature:642957-643091:-1:exon
so has part: feature:642341-642454:-1:exon
so has part: feature:636994-637049:-1:exon
so has part: feature:636471-636480:-1:exon

XP_015740941.1
type: Protein
SIO_000068: ncbiprotein

position:688393:-1
position: 688393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688325-688393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682145-682230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677203-677302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675301-675340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671644-671810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670969-671076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670264-670339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667017-667172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657898-658097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656041-656206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655706-655780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654156-654343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651539-651634:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651185-651341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650501-650634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:649270-649336:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:649050-649129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:642957-643091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:642341-642454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636994-637049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:636471-636480:-1:exon

MEIOC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 692770..709524
location: region:692770-709524:1
so has part: feature:692770-709524:1:exon
subclass of: SO_0000010

107325023
type: Gene
SIO_000068: ncbigene

position:692770:1
position: 692770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709524:1
position: 709524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692770-709524:1:exon

MEIOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MEIOC
product: meiosis specific with coiled-coil domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015885477.2
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(692770..692882,695001..695123,696704..696861,696971..697075,698080..699892,701109..701243,704826..705006,707933..709524)
location: region:692770-709524:1
so has part: feature:692770-692882:1:exon
so has part: feature:695001-695123:1:exon
so has part: feature:696704-696861:1:exon
so has part: feature:696971-697075:1:exon
so has part: feature:698080-699892:1:exon
so has part: feature:701109-701243:1:exon
so has part: feature:704826-705006:1:exon
so has part: feature:707933-709524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692770-692882:1:exon

position:692882:1
position: 692882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695001-695123:1:exon

position:695001:1
position: 695001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695123:1
position: 695123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696704-696861:1:exon

position:696704:1
position: 696704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696861:1
position: 696861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:696971-697075:1:exon

position:696971:1
position: 696971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697075:1
position: 697075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:698080-699892:1:exon

position:698080:1
position: 698080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699892:1
position: 699892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:701109-701243:1:exon

position:701109:1
position: 701109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701243:1
position: 701243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:704826-705006:1:exon

position:704826:1
position: 704826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705006:1
position: 705006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707933-709524:1:exon

position:707933:1
position: 707933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEIOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis-specific coiled-coil domain-containing protein MEIOC
translation: MEPKVVCRGGSCCWSSTEAGSRLADVFSSVMAESGSHGCYKPQNEENVDPPQTYSSSLSTPEFSAPVDSSLLYTPWSVCGDDNKQPVVPQMNVKSRIQTERNDYGSEADLYELVSSILEEQDKSQPYCAEGSCSSNLKSVWPINATRIADHHNLLSETKRPAAAAVSQQSFYSSESTSAAEKQYLQNANLAPQQKVEECYHGFPATDLEEQCLCTSRNDHANCCNMQANENIKTTPMCQNYPCVKNTFSPTGYLEVIKDSGADAYSYRRENACPKGADAQLHQKQAETLPQFHGCNENADYGRYSEYSHFTKAKPTKSINCNFQESKKLVSEMTEASSLDVEPYTKLFQFKSGTQRKIEAIPDQQNFTFTKAAGLLSEKQFANEPPFCSDLGQKFEYGLNSLPVCPGNSDCANGVDKPQFSKSDLQNPEYCKPLPLLPNSAALSAGASMRQAWMNFQTKPTVPSHSPSVVKLNNHLSTLQKNSSISNDFLPLSSSNIPLNGNLSHKNCQDNSLFFSSLDFGYNTSERAQPSALIEALAKTGEENLIEFLSDKKLMQPDRGCSAQQFGTIENLNKQCFQLKPQSGHYDLEGQKHTDGLLQNTYQDSVESQGQLNLRQGNRGNNAANHTTHVQASSFANSCVMGDWKHNAQLGSGAVSSRSARPFGRLVVPLMESYNMFSGDSLNCFYPYVNDMISDVPALGYQKQAKTHSGSARELRVKLEECYEQCRALEKERKEAESALAKSYPGKSISSNNNAPVPRLTSNSSRVDRLIVDQLREQARVVTLLGKMERLRSSPLHVNISTALDKYLEVIRAVQTRRKYEIVNASHQQKQGAPRCQDDRDVLALALAVNEMSTATRHVRTSLWCALQVTLPKLAAGQLLTAKTLRERIRPEEKRTKT
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(692877..692882,695001..695123,696704..696861,696971..697075,698080..699892,701109..701243,704826..705006,707933..708108)
location: region:692877-708108:1
so has part: feature:692877-692882:1:exon
so has part: feature:695001-695123:1:exon
so has part: feature:696704-696861:1:exon
so has part: feature:696971-697075:1:exon
so has part: feature:698080-699892:1:exon
so has part: feature:701109-701243:1:exon
so has part: feature:704826-705006:1:exon
so has part: feature:707933-708108:1:exon

XP_015740963.1
type: Protein
SIO_000068: ncbiprotein

position:692877:1
position: 692877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708108:1
position: 708108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692877-692882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695001-695123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696704-696861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696971-697075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698080-699892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701109-701243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704826-705006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707933-708108:1:exon

CCDC43
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CCDC43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(710262..717416)
location: region:710262-717416:-1
so has part: feature:710262-717416:-1:exon
subclass of: SO_0000010

107325025
type: Gene
SIO_000068: ncbigene

position:710262:-1
position: 710262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717416:-1
position: 717416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710262-717416:-1:exon

CCDC43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CCDC43
product: coiled-coil domain containing 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_015885485.2
SIO_010081: CCDC43
subclass of: SO_0000673
so part of: CCDC43
location: complement(join(710262..711696,712290..712348,712649..712784,713705..713792,717198..717416))
location: region:710262-717416:-1
so has part: feature:717198-717416:-1:exon
so has part: feature:713705-713792:-1:exon
so has part: feature:712649-712784:-1:exon
so has part: feature:712290-712348:-1:exon
so has part: feature:710262-711696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717198-717416:-1:exon

position:717198:-1
position: 717198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713705-713792:-1:exon

position:713705:-1
position: 713705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713792:-1
position: 713792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712649-712784:-1:exon

position:712649:-1
position: 712649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712784:-1
position: 712784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:712290-712348:-1:exon

position:712290:-1
position: 712290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712348:-1
position: 712348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710262-711696:-1:exon

position:711696:-1
position: 711696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CCDC43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 43
translation: MAAPSVEAAGPGGFGAWLATRLEALGLDRAVYGAYIAGLLREEESEEERLEALRGVLAACLEEDLLSDVCREVVEKWSESQIVDTKEEKEDEVQAITSMMEKQARIIVKPKEISQEEKQRKEALLAQYANVTDEEDGDDEQDSSAATAVHIGSEKSLFRNTNVEDVLNARKLERELLRDEFQKKKEQDKLQREKDKLAKQERKEKEKKRTQKGERKR
SIO_010081: CCDC43
subclass of: SO_0000673
so part of: CCDC43
location: complement(join(711509..711696,712290..712348,712649..712784,713705..713792,717198..717380))
location: region:711509-717380:-1
so has part: feature:717198-717380:-1:exon
so has part: feature:713705-713792:-1:exon
so has part: feature:712649-712784:-1:exon
so has part: feature:712290-712348:-1:exon
so has part: feature:711509-711696:-1:exon

XP_015740971.1
type: Protein
SIO_000068: ncbiprotein

position:711509:-1
position: 711509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717380:-1
position: 717380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717198-717380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713705-713792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712649-712784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712290-712348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711696:-1:exon

DBF4B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717491..727257
location: region:717491-727257:1
so has part: feature:717491-727257:1:exon
subclass of: SO_0000010

107325024
type: Gene
SIO_000068: ncbigene

position:717491:1
position: 717491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727257:1
position: 727257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717491-727257:1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015885483.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717491..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725906..726015,726329..726502)
location: region:717491-726502:1
so has part: feature:717491-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726329-726502:1:exon

position:726502:1
position: 726502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717491-717719:1:exon

position:717719:1
position: 717719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

position:720304:1
position: 720304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720495:1
position: 720495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

position:721236:1
position: 721236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721286:1
position: 721286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

position:721848:1
position: 721848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721917:1
position: 721917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

position:722604:1
position: 722604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722668:1
position: 722668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

position:722975:1
position: 722975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723005:1
position: 723005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

position:724233:1
position: 724233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724278:1
position: 724278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

position:724823:1
position: 724823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724939:1
position: 724939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:725906-726015:1:exon

position:725906:1
position: 725906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726015:1
position: 726015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:726329-726502:1:exon

position:726329:1
position: 726329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_015885484.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717491..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725906..726015,726158..726291)
location: region:717491-726291:1
so has part: feature:717491-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-726291:1:exon

position:726291:1
position: 726291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717491-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726158-726291:1:exon

position:726158:1
position: 726158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015885481.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717497..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726329..727257)
location: region:717497-727257:1
so has part: feature:717497-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726329-727257:1:exon

position:717497:1
position: 717497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717497-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

position:725128:1
position: 725128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725236:1
position: 725236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726329-727257:1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_015885478.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717499..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726158..727257)
location: region:717499-727257:1
so has part: feature:717499-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-727257:1:exon

position:717499:1
position: 717499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717499-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726158-727257:1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_015885479.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717499..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724236..724278,724823..724939,725128..725236,725906..726015,726158..727257)
location: region:717499-727257:1
so has part: feature:717499-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724236-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-727257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717499-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724236-724278:1:exon

position:724236:1
position: 724236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726158-727257:1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DBF4B
product: DBF4 zinc finger B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015885482.2
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717513..717608,720304..720495,721236..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726158..727257)
location: region:717513-727257:1
so has part: feature:717513-717608:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-727257:1:exon

position:717513:1
position: 717513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717513-717608:1:exon

position:717608:1
position: 717608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726158-727257:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X1
translation: MAAPAGPLRGKSFFLDVPSGWAARELAAVIRHLGGVTESFLSKEVSYVVSSKKEAKRSRSRAWTEKRGNVTSEDTKAHSSAPSSSKENHTRPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKAGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRARAVEGSNGEKSPRSTAVPKKRKGFCECCQETFEELQKHLQSPQHRRFALDDSHYALVDRVISQLTSSITGQLPRVPLSCLTDEHSMPQAQRAAGAEVLTAVLGEERQQGAVGLLSADPDPDIEGCSSCLPRDGVSDPTEAEEPMGSCPLELPVGSRAATAAPSEPHRLLHTPPACRKRPLCPTQPTPLGKKPRVELGAIPTPSPVFPHTPPCSTAAPWDFVLSSVSDWDVPLVHTLLQDSGIRSMDKDLLQRTHSSVRDSGYDSQLCLVLRQNSDRSCSVGSRAAFPPVSDLFWQLD
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717615..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726158..726830)
location: region:717615-726830:1
so has part: feature:717615-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-726830:1:exon

XP_015740964.1
type: Protein
SIO_000068: ncbiprotein

position:717615:1
position: 717615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726830:1
position: 726830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717615-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726158-726830:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X3
translation: MAAPAGPLRGKSFFLDVPSGWAARELAAVIRHLGGVTESFLSKEVSYVVSSKKEAKRSRSRAWTEKRGNVTSEDTKAHSSAPSSSKENHTRPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKAGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRARAVEGSNGEKSPRSTAVPKKRKGFCECCQETFEELQKHLQSPQHRRFALDDSHYALVDRVISQLTSSITGQLPRDGVSDPTEAEEPMGSCPLELPVGSRAATAAPSEPHRLLHTPPACRKRPLCPTQPTPLGKKPRVELGAIPTPSPVFPHTPPCSTAAPWDFVLSSVSDWDVPLVHTLLQDSGIRSMDKDLLQRTHSSVRDSGYDSQLCLVLRQNSDRSCSVGSRAAFPPVSDLFWQLD
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717615..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726329..726830)
location: region:717615-726830:1
so has part: feature:717615-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726329-726830:1:exon

XP_015740967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717615-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726329-726830:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X2
translation: MAAPAGPLRGKSFFLDVPSGWAARELAAVIRHLGGVTESFLSKEVSYVVSSKKEAKRSRSRAWTEKRGNVTSEDTKAHSSAPSSSKENHTRPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRARAVEGSNGEKSPRSTAVPKKRKGFCECCQETFEELQKHLQSPQHRRFALDDSHYALVDRVISQLTSSITGQLPRVPLSCLTDEHSMPQAQRAAGAEVLTAVLGEERQQGAVGLLSADPDPDIEGCSSCLPRDGVSDPTEAEEPMGSCPLELPVGSRAATAAPSEPHRLLHTPPACRKRPLCPTQPTPLGKKPRVELGAIPTPSPVFPHTPPCSTAAPWDFVLSSVSDWDVPLVHTLLQDSGIRSMDKDLLQRTHSSVRDSGYDSQLCLVLRQNSDRSCSVGSRAAFPPVSDLFWQLD
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717615..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724236..724278,724823..724939,725128..725236,725906..726015,726158..726830)
location: region:717615-726830:1
so has part: feature:717615-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724236-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-726830:1:exon

XP_015740965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717615-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724236-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726158-726830:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X5
translation: MAAPAGPLRGKSFFLDVPSGWAARELAAVIRHLGGVTESFLSKEVSYVVSSKKEAKRSRSRAWTEKRGNVTSEDTKAHSSAPSSSKENHTRPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKAGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRASTCRALSTDALPWMTLITPWWIVSSHSSPAASRGSCPGMGSVIPQKQRNRWGAAL
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717615..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725906..726015,726329..726384)
location: region:717615-726384:1
so has part: feature:717615-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726329-726384:1:exon

XP_015740969.1
type: Protein
SIO_000068: ncbiprotein

position:726384:1
position: 726384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717615-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726329-726384:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X6
translation: MAAPAGPLRGKSFFLDVPSGWAARELAAVIRHLGGVTESFLSKEVSYVVSSKKEAKRSRSRAWTEKRGNVTSEDTKAHSSAPSSSKENHTRPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKAGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRASTCRALSTDALPWMTLITPWWIVSSHSSPAASRGSCPGCRCPA
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(717615..717719,720304..720495,721236..721286,721848..721917,722604..722668,722975..723005,724233..724278,724823..724939,725906..726015,726158..726177)
location: region:717615-726177:1
so has part: feature:717615-717719:1:exon
so has part: feature:720304-720495:1:exon
so has part: feature:721236-721286:1:exon
so has part: feature:721848-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-726177:1:exon

XP_015740970.1
type: Protein
SIO_000068: ncbiprotein

position:726177:1
position: 726177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717615-717719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720304-720495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721236-721286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721848-721917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726158-726177:1:exon

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B isoform X4
translation: MGLLLLGAVPCQTSLFAQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGAWKQRTEAQCPVSGAHKAGKLKPPFLKVEDQSRQFRPFHHQFKSFPDLNLLAPKGSSPFEPPKNLSNSCRARAVEGSNGEKSPRSTAVPKKRKGFCECCQETFEELQKHLQSPQHRRFALDDSHYALVDRVISQLTSSITGQLPRVPLSCLTDEHSMPQAQRAAGAEVLTAVLGEERQQGAVGLLSADPDPDIEGCSSCLPRDGVSDPTEAEEPMGSCPLELPVGSRAATAAPSEPHRLLHTPPACRKRPLCPTQPTPLGKKPRVELGAIPTPSPVFPHTPPCSTAAPWDFVLSSVSDWDVPLVHTLLQDSGIRSMDKDLLQRTHSSVRDSGYDSQLCLVLRQNSDRSCSVGSRAAFPPVSDLFWQLD
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(721794..721917,722604..722668,722975..723005,724233..724278,724823..724939,725128..725236,725906..726015,726158..726830)
location: region:721794-726830:1
so has part: feature:721794-721917:1:exon
so has part: feature:722604-722668:1:exon
so has part: feature:722975-723005:1:exon
so has part: feature:724233-724278:1:exon
so has part: feature:724823-724939:1:exon
so has part: feature:725128-725236:1:exon
so has part: feature:725906-726015:1:exon
so has part: feature:726158-726830:1:exon

XP_015740968.1
type: Protein
SIO_000068: ncbiprotein

position:721794:1
position: 721794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721794-721917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722604-722668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722975-723005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724233-724278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724823-724939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:725128-725236:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725906-726015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726158-726830:1:exon

ADAM11
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 727730..738471
location: region:727730-738471:1
so has part: feature:727730-738471:1:exon
subclass of: SO_0000010

107325030
type: Gene
SIO_000068: ncbigene

position:727730:1
position: 727730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738471:1
position: 738471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727730-738471:1:exon

ADAM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ADAM11
product: ADAM metallopeptidase domain 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_015885501.2
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: join(727730..727899,729115..729305,729506..729582,729806..729869,730938..731023,731107..731173,731256..731304,731385..731455,731821..731895,731956..732027,732386..732543,732613..732697,732800..732890,732968..733019,733457..733556,733851..733922,733994..734086,734159..734239,734540..734590,734970..735033,735101..735200,735292..735411,735994..736162,736257..736371,736462..736552,736961..738471)
location: region:727730-738471:1
so has part: feature:727730-727899:1:exon
so has part: feature:729115-729305:1:exon
so has part: feature:729506-729582:1:exon
so has part: feature:729806-729869:1:exon
so has part: feature:730938-731023:1:exon
so has part: feature:731107-731173:1:exon
so has part: feature:731256-731304:1:exon
so has part: feature:731385-731455:1:exon
so has part: feature:731821-731895:1:exon
so has part: feature:731956-732027:1:exon
so has part: feature:732386-732543:1:exon
so has part: feature:732613-732697:1:exon
so has part: feature:732800-732890:1:exon
so has part: feature:732968-733019:1:exon
so has part: feature:733457-733556:1:exon
so has part: feature:733851-733922:1:exon
so has part: feature:733994-734086:1:exon
so has part: feature:734159-734239:1:exon
so has part: feature:734540-734590:1:exon
so has part: feature:734970-735033:1:exon
so has part: feature:735101-735200:1:exon
so has part: feature:735292-735411:1:exon
so has part: feature:735994-736162:1:exon
so has part: feature:736257-736371:1:exon
so has part: feature:736462-736552:1:exon
so has part: feature:736961-738471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727730-727899:1:exon

position:727899:1
position: 727899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729115-729305:1:exon

position:729115:1
position: 729115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729305:1
position: 729305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729506-729582:1:exon

position:729506:1
position: 729506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729582:1
position: 729582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:729806-729869:1:exon

position:729806:1
position: 729806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729869:1
position: 729869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730938-731023:1:exon

position:730938:1
position: 730938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731023:1
position: 731023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:731107-731173:1:exon

position:731107:1
position: 731107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731173:1
position: 731173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:731256-731304:1:exon

position:731256:1
position: 731256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731304:1
position: 731304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:731385-731455:1:exon

position:731385:1
position: 731385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731455:1
position: 731455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:731821-731895:1:exon

position:731821:1
position: 731821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731895:1
position: 731895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:731956-732027:1:exon

position:731956:1
position: 731956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732027:1
position: 732027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:732386-732543:1:exon

position:732386:1
position: 732386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732543:1
position: 732543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:732613-732697:1:exon

position:732613:1
position: 732613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732697:1
position: 732697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:732800-732890:1:exon

position:732800:1
position: 732800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732890:1
position: 732890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:732968-733019:1:exon

position:732968:1
position: 732968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733019:1
position: 733019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:733457-733556:1:exon

position:733457:1
position: 733457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733556:1
position: 733556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:733851-733922:1:exon

position:733851:1
position: 733851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733922:1
position: 733922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:733994-734086:1:exon

position:733994:1
position: 733994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734086:1
position: 734086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:734159-734239:1:exon

position:734159:1
position: 734159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734239:1
position: 734239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:734540-734590:1:exon

position:734540:1
position: 734540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734590:1
position: 734590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:734970-735033:1:exon

position:734970:1
position: 734970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735033:1
position: 735033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:735101-735200:1:exon

position:735101:1
position: 735101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735200:1
position: 735200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:735292-735411:1:exon

position:735292:1
position: 735292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735411:1
position: 735411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:735994-736162:1:exon

position:735994:1
position: 735994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736162:1
position: 736162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:736257-736371:1:exon

position:736257:1
position: 736257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736371:1
position: 736371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:736462-736552:1:exon

position:736462:1
position: 736462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736552:1
position: 736552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:736961-738471:1:exon

position:736961:1
position: 736961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 11
translation: MSALRGWGGCWRAAVADPRAGPTGATPQTGAPQRRLPRSVWPEGRALSEVTHPSRLVGHSAGGEVPKHQLDTRVRNESGTGGGPGVHLAQVSFMVRAFGSAFILDLELNHHLLASHYVERHLGTGQNSSSTAVGEHCYYQGRVRGQPRSFAALSSCQGLHGVFSDGRDLFLIEPQEGTEHGEGLQPHLIQRTPSCAQPGCMLGAMGQYSLGSSARLRRRRRQVRRAQHTVHSETKYIELAVVNDHQLFLQLRRSVVLTSNFAKSVVNLADMIYKEQLNTRIVLVAMETWAAGDRIRMEEDSMGILNEFMRHRREEHSDAVHLFSGRTFQSSRSGTAFVGGICSAGRAGGVNEYGNMAAMAVTLAQTLGQNVGMMWNKHRTSAGDCRCPDVWLGCIMEDTGYYLPQKFSRCSIDEYNQFLQDGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSQTECARSGGNCCKKCTLTHDAMCSDGLCCRGCKYEPRGVSCREAVNECDIPETCTGDSSQCPPNLHKLDGYFCDNEQGRCYGGRCKTRDRQCNALWGRGSAERFCYEKLNVEGTERGNCGHEGAGWTQCNKQDVLCGFLLCANISGAPRLGELSGEVATTTFFHQNRYVDCRGGHVQLADGSELSYVEDGTPCGPAMLCLDHKCLPVTAFNFSSCPGSGDGKICFEHGVCSNEGKCICQPEWTGKDCSVYDPIPEPKPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRYDPAQQGV
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: join(727839..727899,729115..729305,729506..729582,729806..729869,730938..731023,731107..731173,731256..731304,731385..731455,731821..731895,731956..732027,732386..732543,732613..732697,732800..732890,732968..733019,733457..733556,733851..733922,733994..734086,734159..734239,734540..734590,734970..735033,735101..735200,735292..735411,735994..736162,736257..736371,736462..736552,736961..737006)
location: region:727839-737006:1
so has part: feature:727839-727899:1:exon
so has part: feature:729115-729305:1:exon
so has part: feature:729506-729582:1:exon
so has part: feature:729806-729869:1:exon
so has part: feature:730938-731023:1:exon
so has part: feature:731107-731173:1:exon
so has part: feature:731256-731304:1:exon
so has part: feature:731385-731455:1:exon
so has part: feature:731821-731895:1:exon
so has part: feature:731956-732027:1:exon
so has part: feature:732386-732543:1:exon
so has part: feature:732613-732697:1:exon
so has part: feature:732800-732890:1:exon
so has part: feature:732968-733019:1:exon
so has part: feature:733457-733556:1:exon
so has part: feature:733851-733922:1:exon
so has part: feature:733994-734086:1:exon
so has part: feature:734159-734239:1:exon
so has part: feature:734540-734590:1:exon
so has part: feature:734970-735033:1:exon
so has part: feature:735101-735200:1:exon
so has part: feature:735292-735411:1:exon
so has part: feature:735994-736162:1:exon
so has part: feature:736257-736371:1:exon
so has part: feature:736462-736552:1:exon
so has part: feature:736961-737006:1:exon

XP_015740987.1
type: Protein
SIO_000068: ncbiprotein

position:727839:1
position: 727839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737006:1
position: 737006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727839-727899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729115-729305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729506-729582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729806-729869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730938-731023:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731107-731173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731256-731304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731385-731455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:731821-731895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:731956-732027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:732386-732543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:732613-732697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732800-732890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732968-733019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:733457-733556:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:733851-733922:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:733994-734086:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:734159-734239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:734540-734590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734970-735033:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:735101-735200:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:735292-735411:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:735994-736162:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:736257-736371:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:736462-736552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:736961-737006:1:exon

GJC1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747548..761640)
location: region:747548-761640:-1
so has part: feature:747548-761640:-1:exon
subclass of: SO_0000010

107325028
type: Gene
SIO_000068: ncbigene

position:747548:-1
position: 747548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761640:-1
position: 761640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747548-761640:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015885498.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,752555..752668,759913..759956,761578..761640))
location: region:747548-761640:-1
so has part: feature:761578-761640:-1:exon
so has part: feature:759913-759956:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:747548-751142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761578-761640:-1:exon

position:761578:-1
position: 761578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759913-759956:-1:exon

position:759913:-1
position: 759913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759956:-1
position: 759956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752555-752668:-1:exon

position:752555:-1
position: 752555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752668:-1
position: 752668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

position:751142:-1
position: 751142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_015885488.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,759913..759956,761578..761640))
location: region:747548-761640:-1
so has part: feature:761578-761640:-1:exon
so has part: feature:759913-759956:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761578-761640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759913-759956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751269-751343:-1:exon

position:751269:-1
position: 751269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751343:-1
position: 751343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015885491.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,759913..759956,761257..761470))
location: region:747548-761470:-1
so has part: feature:761257-761470:-1:exon
so has part: feature:759913-759956:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:761470:-1
position: 761470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761257-761470:-1:exon

position:761257:-1
position: 761257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759913-759956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_015885489.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,759913..760519))
location: region:747548-760519:-1
so has part: feature:759913-760519:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:760519:-1
position: 760519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759913-760519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_015885492.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,759606..759730))
location: region:747548-759730:-1
so has part: feature:759606-759730:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:759730:-1
position: 759730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759606-759730:-1:exon

position:759606:-1
position: 759606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015885493.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,755910..759563))
location: region:747548-759563:-1
so has part: feature:755910-759563:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:759563:-1
position: 759563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755910-759563:-1:exon

position:755910:-1
position: 755910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015885494.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,754200..755889))
location: region:747548-755889:-1
so has part: feature:754200-755889:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:755889:-1
position: 755889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754200-755889:-1:exon

position:754200:-1
position: 754200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015885496.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,753048..754189))
location: region:747548-754189:-1
so has part: feature:753048-754189:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:754189:-1
position: 754189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753048-754189:-1:exon

position:753048:-1
position: 753048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GJC1
product: gap junction protein gamma 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015885495.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(747548..751142,751269..751343,752555..752668,752822..753025))
location: region:747548-753025:-1
so has part: feature:752822-753025:-1:exon
so has part: feature:752555-752668:-1:exon
so has part: feature:751269-751343:-1:exon
so has part: feature:747548-751142:-1:exon

position:753025:-1
position: 753025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752822-753025:-1:exon

position:752822:-1
position: 752822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752555-752668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751269-751343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747548-751142:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740974.1
type: Protein
SIO_000068: ncbiprotein

position:749939:-1
position: 749939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751123:-1
position: 751123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDIDRRFRSKSFSMRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRAMFEIGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNNKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDLAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(749939..751123)
location: region:749939-751123:-1
so has part: feature:749939-751123:-1:exon

XP_015740984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749939-751123:-1:exon

EFTUD2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(763140..778949)
location: region:763140-778949:-1
so has part: feature:763140-778949:-1:exon
subclass of: SO_0000010

107325017
type: Gene
SIO_000068: ncbigene

position:763140:-1
position: 763140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778949:-1
position: 778949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763140-778949:-1:exon

EFTUD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: EFTUD2
product: elongation factor Tu GTP binding domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 58 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 156 samples with support for all annotated introns
transcript id: XM_015885469.2
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: complement(join(763140..763695,763785..763892,764447..764600,764846..764940,765403..765521,765715..765802,766395..766521,766789..766875,767890..767972,768191..768292,768487..768627,768828..768939,769293..769486,769981..770108,770389..770524,770916..771006,771372..771435,773059..773183,773761..773927,774375..774457,774744..774834,775724..775759,775961..776026,776296..776371,777582..777660,777823..777988,778232..778337,778812..778949))
location: region:763140-778949:-1
so has part: feature:778812-778949:-1:exon
so has part: feature:778232-778337:-1:exon
so has part: feature:777823-777988:-1:exon
so has part: feature:777582-777660:-1:exon
so has part: feature:776296-776371:-1:exon
so has part: feature:775961-776026:-1:exon
so has part: feature:775724-775759:-1:exon
so has part: feature:774744-774834:-1:exon
so has part: feature:774375-774457:-1:exon
so has part: feature:773761-773927:-1:exon
so has part: feature:773059-773183:-1:exon
so has part: feature:771372-771435:-1:exon
so has part: feature:770916-771006:-1:exon
so has part: feature:770389-770524:-1:exon
so has part: feature:769981-770108:-1:exon
so has part: feature:769293-769486:-1:exon
so has part: feature:768828-768939:-1:exon
so has part: feature:768487-768627:-1:exon
so has part: feature:768191-768292:-1:exon
so has part: feature:767890-767972:-1:exon
so has part: feature:766789-766875:-1:exon
so has part: feature:766395-766521:-1:exon
so has part: feature:765715-765802:-1:exon
so has part: feature:765403-765521:-1:exon
so has part: feature:764846-764940:-1:exon
so has part: feature:764447-764600:-1:exon
so has part: feature:763785-763892:-1:exon
so has part: feature:763140-763695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778812-778949:-1:exon

position:778812:-1
position: 778812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778232-778337:-1:exon

position:778232:-1
position: 778232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778337:-1
position: 778337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777823-777988:-1:exon

position:777823:-1
position: 777823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777988:-1
position: 777988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777582-777660:-1:exon

position:777582:-1
position: 777582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777660:-1
position: 777660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776296-776371:-1:exon

position:776296:-1
position: 776296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776371:-1
position: 776371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:775961-776026:-1:exon

position:775961:-1
position: 775961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776026:-1
position: 776026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:775724-775759:-1:exon

position:775724:-1
position: 775724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775759:-1
position: 775759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:774744-774834:-1:exon

position:774744:-1
position: 774744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774834:-1
position: 774834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:774375-774457:-1:exon

position:774375:-1
position: 774375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774457:-1
position: 774457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:773761-773927:-1:exon

position:773761:-1
position: 773761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773927:-1
position: 773927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:773059-773183:-1:exon

position:773059:-1
position: 773059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773183:-1
position: 773183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:771372-771435:-1:exon

position:771372:-1
position: 771372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771435:-1
position: 771435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:770916-771006:-1:exon

position:770916:-1
position: 770916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771006:-1
position: 771006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:770389-770524:-1:exon

position:770389:-1
position: 770389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770524:-1
position: 770524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:769981-770108:-1:exon

position:769981:-1
position: 769981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770108:-1
position: 770108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:769293-769486:-1:exon

position:769293:-1
position: 769293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769486:-1
position: 769486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:768828-768939:-1:exon

position:768828:-1
position: 768828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768939:-1
position: 768939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:768487-768627:-1:exon

position:768487:-1
position: 768487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768627:-1
position: 768627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:768191-768292:-1:exon

position:768191:-1
position: 768191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768292:-1
position: 768292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:767890-767972:-1:exon

position:767890:-1
position: 767890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767972:-1
position: 767972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:766789-766875:-1:exon

position:766789:-1
position: 766789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766875:-1
position: 766875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:766395-766521:-1:exon

position:766395:-1
position: 766395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766521:-1
position: 766521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:765715-765802:-1:exon

position:765715:-1
position: 765715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765802:-1
position: 765802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:765403-765521:-1:exon

position:765403:-1
position: 765403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765521:-1
position: 765521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:764846-764940:-1:exon

position:764846:-1
position: 764846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764940:-1
position: 764940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:764447-764600:-1:exon

position:764447:-1
position: 764447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764600:-1
position: 764600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:763785-763892:-1:exon

position:763785:-1
position: 763785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763892:-1
position: 763892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:763140-763695:-1:exon

position:763695:-1
position: 763695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFTUD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 116 kDa U5 small nuclear ribonucleoprotein component
translation: MDTDLYDEFGNYIGPELDSDDEDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKLGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: complement(join(763600..763695,763785..763892,764447..764600,764846..764940,765403..765521,765715..765802,766395..766521,766789..766875,767890..767972,768191..768292,768487..768627,768828..768939,769293..769486,769981..770108,770389..770524,770916..771006,771372..771435,773059..773183,773761..773927,774375..774457,774744..774834,775724..775759,775961..776026,776296..776371,777582..777660,777823..777988,778232..778336))
location: region:763600-778336:-1
so has part: feature:778232-778336:-1:exon
so has part: feature:777823-777988:-1:exon
so has part: feature:777582-777660:-1:exon
so has part: feature:776296-776371:-1:exon
so has part: feature:775961-776026:-1:exon
so has part: feature:775724-775759:-1:exon
so has part: feature:774744-774834:-1:exon
so has part: feature:774375-774457:-1:exon
so has part: feature:773761-773927:-1:exon
so has part: feature:773059-773183:-1:exon
so has part: feature:771372-771435:-1:exon
so has part: feature:770916-771006:-1:exon
so has part: feature:770389-770524:-1:exon
so has part: feature:769981-770108:-1:exon
so has part: feature:769293-769486:-1:exon
so has part: feature:768828-768939:-1:exon
so has part: feature:768487-768627:-1:exon
so has part: feature:768191-768292:-1:exon
so has part: feature:767890-767972:-1:exon
so has part: feature:766789-766875:-1:exon
so has part: feature:766395-766521:-1:exon
so has part: feature:765715-765802:-1:exon
so has part: feature:765403-765521:-1:exon
so has part: feature:764846-764940:-1:exon
so has part: feature:764447-764600:-1:exon
so has part: feature:763785-763892:-1:exon
so has part: feature:763600-763695:-1:exon

XP_015740955.1
type: Protein
SIO_000068: ncbiprotein

position:763600:-1
position: 763600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778336:-1
position: 778336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778232-778336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777823-777988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777582-777660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776296-776371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775961-776026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775724-775759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774744-774834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:774375-774457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:773761-773927:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:773059-773183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771372-771435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:770916-771006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:770389-770524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:769981-770108:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769293-769486:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768828-768939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:768487-768627:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:768191-768292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:767890-767972:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:766789-766875:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:766395-766521:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:765715-765802:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:765403-765521:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:764846-764940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:764447-764600:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:763785-763892:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:763600-763695:-1:exon

CCDC103
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778962..782813
location: region:778962-782813:1
so has part: feature:778962-782813:1:exon
subclass of: SO_0000010

107325020
type: Gene
SIO_000068: ncbigene

position:778962:1
position: 778962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782813:1
position: 782813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778962-782813:1:exon

CCDC103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CCDC103
product: coiled-coil domain containing 103, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_015885473.2
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(778962..779097,779343..779521,780432..780582,782312..782813)
location: region:778962-782813:1
so has part: feature:778962-779097:1:exon
so has part: feature:779343-779521:1:exon
so has part: feature:780432-780582:1:exon
so has part: feature:782312-782813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778962-779097:1:exon

position:779097:1
position: 779097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779343-779521:1:exon

position:779343:1
position: 779343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779521:1
position: 779521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780432-780582:1:exon

position:780432:1
position: 780432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780582:1
position: 780582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782312-782813:1:exon

position:782312:1
position: 782312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CCDC103
product: coiled-coil domain containing 103, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_015885475.2
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(778963..779097,779343..779521,780432..780564,782312..782813)
location: region:778963-782813:1
so has part: feature:778963-779097:1:exon
so has part: feature:779343-779521:1:exon
so has part: feature:780432-780564:1:exon
so has part: feature:782312-782813:1:exon

position:778963:1
position: 778963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778963-779097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779343-779521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780432-780564:1:exon

position:780564:1
position: 780564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782312-782813:1:exon

CCDC103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 103 isoform X1
translation: MDAGGAVDMAALREELRAALEADERHERENNAKLRAVRQRLGSYQEFRDIVLASHLRPLEKKDKMGNKRNVLWNPCAGHMRGQQATKVEIPQVREIAQELEQLPRTSAEFYRDWRRCLQSGKEKYQLLLKLEGKALSRIFQAELGFGLLGEFLTVLAENICHEDRDAVLQILHSLSGTKRFGLNLDLLSTSEKESTRDLFRKLQSMSGGYWSPGHPCGKAEGEAHPTDTSLQKEAKERRVMELMSCYQVS
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(779379..779521,780432..780582,782312..782770)
location: region:779379-782770:1
so has part: feature:779379-779521:1:exon
so has part: feature:780432-780582:1:exon
so has part: feature:782312-782770:1:exon

XP_015740959.1
type: Protein
SIO_000068: ncbiprotein

position:779379:1
position: 779379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782770:1
position: 782770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779379-779521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780432-780582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782312-782770:1:exon

CCDC103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 103 isoform X2
translation: MDAGGAVDMAALREELRAALEADERHERENNAKLRAVRQRLGSYQEFRDIVLASHLRPLEKKDKMGNKRNVLWNPCAGHMRGQQATKVEIPQELEQLPRTSAEFYRDWRRCLQSGKEKYQLLLKLEGKALSRIFQAELGFGLLGEFLTVLAENICHEDRDAVLQILHSLSGTKRFGLNLDLLSTSEKESTRDLFRKLQSMSGGYWSPGHPCGKAEGEAHPTDTSLQKEAKERRVMELMSCYQVS
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(779379..779521,780432..780564,782312..782770)
location: region:779379-782770:1
so has part: feature:779379-779521:1:exon
so has part: feature:780432-780564:1:exon
so has part: feature:782312-782770:1:exon

XP_015740961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:779379-779521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780432-780564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782312-782770:1:exon

FAM187A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FAM187A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 782933..785501
location: region:782933-785501:1
so has part: feature:782933-785501:1:exon
subclass of: SO_0000010

107325019
type: Gene
SIO_000068: ncbigene

position:782933:1
position: 782933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785501:1
position: 785501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782933-785501:1:exon

FAM187A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FAM187A
product: family with sequence similarity 187 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885472.2
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 782933..785501
location: region:782933-785501:1
so has part: feature:782933-785501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782933-785501:1:exon

FAM187A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FAM187A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig-like V-type domain-containing protein FAM187A
translation: MELSAGCPIAQHNTWKGSRAAGRVLEPVSQTTGMETWLLGAVLLYMADVLHSYAVEEKDDVFRRMVCPAFLMFDNAAYLADMTFELPCNCKPEEVSNVVWYFQKSMGGHETTVLTDFSGNMVLDSGHIHVGSDVLKRFTIRMFSLIIFRAQESDSGHYICGTKKGDFFYGYDVDVQPTKRITVAFLDEGQHVQDDYTGKAFSVFTTFWDWTKCDRCGVRGEQRRIGLCYMQSTRLHPRYRTVLHNVTSCGSRAVPPRFQRSGRRWKPEVAIRSCTTPCEQEDNPQEGVQAISNIIHKLGQKPWLPNVPTQYYKHPLGRDLVIACPRARPEHAVAWDWDSVRLYRSRYLVGVNRTMRVFIDHGNHLHIRRVRFSDRGTYFCWREGKLVAGLRLTVSYESKSRRKLTDPETIYILKAISVSYILIGAIFFSIHLSRCCWRMLRSSART
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 783935..785275
location: region:783935-785275:1
so has part: feature:783935-785275:1:exon

XP_015740958.1
type: Protein
SIO_000068: ncbiprotein

position:783935:1
position: 783935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785275:1
position: 785275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783935-785275:1:exon

GFAP
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GFAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(786099..790570)
location: region:786099-790570:-1
so has part: feature:786099-790570:-1:exon
subclass of: SO_0000010

107325021
type: Gene
SIO_000068: ncbigene

position:786099:-1
position: 786099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790570:-1
position: 790570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786099-790570:-1:exon

GFAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GFAP
product: glial fibrillary acidic protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 39 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885476.2
SIO_010081: GFAP
subclass of: SO_0000673
so part of: GFAP
location: complement(join(786099..787209,787361..787446,788106..788149,788281..788501,788617..788742,788864..789025,789094..789189,789354..789414,790108..790570))
location: region:786099-790570:-1
so has part: feature:790108-790570:-1:exon
so has part: feature:789354-789414:-1:exon
so has part: feature:789094-789189:-1:exon
so has part: feature:788864-789025:-1:exon
so has part: feature:788617-788742:-1:exon
so has part: feature:788281-788501:-1:exon
so has part: feature:788106-788149:-1:exon
so has part: feature:787361-787446:-1:exon
so has part: feature:786099-787209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790108-790570:-1:exon

position:790108:-1
position: 790108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789354-789414:-1:exon

position:789354:-1
position: 789354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789414:-1
position: 789414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789094-789189:-1:exon

position:789094:-1
position: 789094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789189:-1
position: 789189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788864-789025:-1:exon

position:788864:-1
position: 788864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789025:-1
position: 789025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:788617-788742:-1:exon

position:788617:-1
position: 788617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788742:-1
position: 788742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:788281-788501:-1:exon

position:788281:-1
position: 788281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788501:-1
position: 788501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788106-788149:-1:exon

position:788106:-1
position: 788106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788149:-1
position: 788149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787361-787446:-1:exon

position:787361:-1
position: 787361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787446:-1
position: 787446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:786099-787209:-1:exon

position:787209:-1
position: 787209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GFAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GFAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glial fibrillary acidic protein
translation: MESRWSSYGRRSSPTVSSWSPTARPRPRSAHPTPHTSSRMDFSMANLLNSEFRETRTNEKVEMMELNDRFASYIEKVRLLEQRNKVLVLELNRVREQEPTRLADVYQEELRELRRRVELLGTAKARAEVQRDGLAEELGSLRDKLQQEVTLRLEAESTLAAYRQDVDAAALARLDLERRVGTLQDEVAFLQKVHEEELRELQEQLAQHRVHVEVDASKPDLTAALRDIRTQYESITVTNLQEAEEWYKSKFADLTDAAARHAEALRAAKHEANEYRRQLQALTCDLEALRGSNESLERQLRELEERYALETSAYQDTVGRLEEDIRGLKEEMARQLREYQELMNVKLALDIEIATYRKLLEGEESRITVPVQSFSNLQIRETSLDTKSVSEAHLKRSIVVKTVETRDGEVIKESKQEHKEVV
SIO_010081: GFAP
subclass of: SO_0000673
so part of: GFAP
location: complement(join(787168..787209,787361..787446,788106..788149,788281..788501,788617..788742,788864..789025,789094..789189,789354..789414,790108..790538))
location: region:787168-790538:-1
so has part: feature:790108-790538:-1:exon
so has part: feature:789354-789414:-1:exon
so has part: feature:789094-789189:-1:exon
so has part: feature:788864-789025:-1:exon
so has part: feature:788617-788742:-1:exon
so has part: feature:788281-788501:-1:exon
so has part: feature:788106-788149:-1:exon
so has part: feature:787361-787446:-1:exon
so has part: feature:787168-787209:-1:exon

XP_015740962.1
type: Protein
SIO_000068: ncbiprotein

position:787168:-1
position: 787168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790538:-1
position: 790538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790108-790538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789354-789414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789094-789189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788864-789025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:788617-788742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:788281-788501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788106-788149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787361-787446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787168-787209:-1:exon

KIF18B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(791521..798974)
location: region:791521-798974:-1
so has part: feature:791521-798974:-1:exon
subclass of: SO_0000010

107325018
type: Gene
SIO_000068: ncbigene

position:791521:-1
position: 791521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798974:-1
position: 798974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791521-798974:-1:exon

KIF18B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KIF18B
product: kinesin family member 18B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_015885470.2
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: complement(join(791521..792222,792459..792544,792664..792759,792865..793363,793725..793918,794038..794153,794350..794461,794614..794702,794853..794927,795257..795433,795508..795705,796400..796510,796701..796805,797223..797380,798347..798974))
location: region:791521-798974:-1
so has part: feature:798347-798974:-1:exon
so has part: feature:797223-797380:-1:exon
so has part: feature:796701-796805:-1:exon
so has part: feature:796400-796510:-1:exon
so has part: feature:795508-795705:-1:exon
so has part: feature:795257-795433:-1:exon
so has part: feature:794853-794927:-1:exon
so has part: feature:794614-794702:-1:exon
so has part: feature:794350-794461:-1:exon
so has part: feature:794038-794153:-1:exon
so has part: feature:793725-793918:-1:exon
so has part: feature:792865-793363:-1:exon
so has part: feature:792664-792759:-1:exon
so has part: feature:792459-792544:-1:exon
so has part: feature:791521-792222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798347-798974:-1:exon

position:798347:-1
position: 798347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:797223-797380:-1:exon

position:797223:-1
position: 797223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797380:-1
position: 797380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796701-796805:-1:exon

position:796701:-1
position: 796701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796805:-1
position: 796805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796400-796510:-1:exon

position:796400:-1
position: 796400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796510:-1
position: 796510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:795508-795705:-1:exon

position:795508:-1
position: 795508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795705:-1
position: 795705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:795257-795433:-1:exon

position:795257:-1
position: 795257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795433:-1
position: 795433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:794853-794927:-1:exon

position:794853:-1
position: 794853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794927:-1
position: 794927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:794614-794702:-1:exon

position:794614:-1
position: 794614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794702:-1
position: 794702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:794350-794461:-1:exon

position:794350:-1
position: 794350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794461:-1
position: 794461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:794038-794153:-1:exon

position:794038:-1
position: 794038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794153:-1
position: 794153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:793725-793918:-1:exon

position:793725:-1
position: 793725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793918:-1
position: 793918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:792865-793363:-1:exon

position:792865:-1
position: 792865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793363:-1
position: 793363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:792664-792759:-1:exon

position:792664:-1
position: 792664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792759:-1
position: 792759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:792459-792544:-1:exon

position:792459:-1
position: 792459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792544:-1
position: 792544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:791521-792222:-1:exon

position:792222:-1
position: 792222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF18B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18B
translation: MDPPAEGGTVAVMVRVRPPAPNEREGAAHSVLHVVDQHILVFDPDEPGGPHGTALHPLPTRGSKQRGKDIKFVFDRVFGEGATQQEVFQHTTRDVLDGVLNGYNCSVFAYGATGAGKTYTMLGSEQSPGIMYLTMAELYRRIEARKDEKSCEVLVSYQEVYNEQIHDLLEPKGPLAIREDPEKGVVVQGLSFHQPRSAEQLLEMLANGNKNRTQHPTDANATSSRSHAVFQIYVKQQDRVVGLAQDLQVAKMSLIDLAGSERASVSKTKGERLREGANINRSLLALINVINALADAKSKKTHIPYRDSKLTRLLKDSIGGNCRTIMIAAVSPSSLAYEDTYNTLKYANRAKEIKLLLKSNVLSLDCHISKYATICEQLKTEVADLQAKLRAYEDAARDAGKQIPVLLPSPRMEGAVPKSCSAPSVRRESDGEQQELGAGQDAQGAVEEVLEAMPPSSSSPSQQADLQLGMKKPNLLPQHLSRSHTDRLIAAVLSVAQKQYSLLKAANLLTPAMVTEFEELQLLVQQEAAVSPQPTDTSGATPALRTQPGCDASPSVLSTESTIPMTRAALRRLQQLTSLPSPKVAVKKRRRSEMSSTSSLETPRSLNTRAKRQRKSSPLSNGDEAEAPWSPHTPCVKQPQSTQLLPSCTPKICPLTVTKGRAPLRTSAAQNCCTPTVCDLNVTYSLSEDVSKPGALSLPSWESAPCALKKQEGPFVPRTSIPVFSMKGSSIPKPSSISKGSVRKRRGAVSTASHSLGGVQSCISSSSSWRSVQPQSIPEHPPPGLTWKGRSGPRDGAPRAPTSQAMKLLC
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: complement(join(792125..792222,792459..792544,792664..792759,792865..793363,793725..793918,794038..794153,794350..794461,794614..794702,794853..794927,795257..795433,795508..795705,796400..796510,796701..796805,797223..797380,798347..798665))
location: region:792125-798665:-1
so has part: feature:798347-798665:-1:exon
so has part: feature:797223-797380:-1:exon
so has part: feature:796701-796805:-1:exon
so has part: feature:796400-796510:-1:exon
so has part: feature:795508-795705:-1:exon
so has part: feature:795257-795433:-1:exon
so has part: feature:794853-794927:-1:exon
so has part: feature:794614-794702:-1:exon
so has part: feature:794350-794461:-1:exon
so has part: feature:794038-794153:-1:exon
so has part: feature:793725-793918:-1:exon
so has part: feature:792865-793363:-1:exon
so has part: feature:792664-792759:-1:exon
so has part: feature:792459-792544:-1:exon
so has part: feature:792125-792222:-1:exon

XP_015740956.1
type: Protein
SIO_000068: ncbiprotein

position:792125:-1
position: 792125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798665:-1
position: 798665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798347-798665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:797223-797380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796701-796805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796400-796510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795508-795705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:795257-795433:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794853-794927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:794614-794702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:794350-794461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794038-794153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:793725-793918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792865-793363:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792664-792759:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:792459-792544:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:792125-792222:-1:exon

C1QL1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799967..807447)
location: region:799967-807447:-1
so has part: feature:799967-807447:-1:exon
subclass of: SO_0000010

107325009
type: Gene
SIO_000068: ncbigene

position:799967:-1
position: 799967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807447:-1
position: 807447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799967-807447:-1:exon

C1QL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: C1QL1
product: complement C1q like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_015885451.2
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: complement(join(799967..800428,803566..807447))
location: region:799967-807447:-1
so has part: feature:803566-807447:-1:exon
so has part: feature:799967-800428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803566-807447:-1:exon

position:803566:-1
position: 803566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799967-800428:-1:exon

position:800428:-1
position: 800428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C1q-related factor
translation: MAAPGGGVPTRWAWLRAARTALRTNQRAEGAWPGGKWACLYWDWAWLHRRWAWPQRQWAWPGAGWACPGSERPELSGADRSGAAPPNPEHSAPNRPRTGTIPAQRAAPAGRRLSLGRKTLLAAAAGVVMVLLLVVLIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTAPGGGPLPPPSTLVQGPQGKAGKPGKPGPPGPPGEPGPPGAAGPPGVRGEAGKPGPPGLPGLGGTGAVSTATYSTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNSYDAASGKFTCPIPGIYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNNNKYSTFSGFIIYSD
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: complement(join(800249..800428,803566..804507))
location: region:800249-804507:-1
so has part: feature:803566-804507:-1:exon
so has part: feature:800249-800428:-1:exon

XP_015740937.1
type: Protein
SIO_000068: ncbiprotein

position:800249:-1
position: 800249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804507:-1
position: 804507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803566-804507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800249-800428:-1:exon

DCAKD
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(807568..816638)
location: region:807568-816638:-1
so has part: feature:807568-816638:-1:exon
subclass of: SO_0000010

107325010
type: Gene
SIO_000068: ncbigene

position:807568:-1
position: 807568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816638:-1
position: 816638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807568-816638:-1:exon

DCAKD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCAKD
product: dephospho-CoA kinase domain containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_015885453.1
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(807568..807666,810910..811069,811151..811238,812746..812949,814420..814537,814846..814956,816310..816505))
location: region:807568-816505:-1
so has part: feature:816310-816505:-1:exon
so has part: feature:814846-814956:-1:exon
so has part: feature:814420-814537:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810910-811069:-1:exon
so has part: feature:807568-807666:-1:exon

position:816505:-1
position: 816505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816310-816505:-1:exon

position:816310:-1
position: 816310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814846-814956:-1:exon

position:814846:-1
position: 814846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814956:-1
position: 814956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:814420-814537:-1:exon

position:814420:-1
position: 814420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814537:-1
position: 814537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:812746-812949:-1:exon

position:812746:-1
position: 812746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812949:-1
position: 812949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811151-811238:-1:exon

position:811151:-1
position: 811151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811238:-1
position: 811238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810910-811069:-1:exon

position:810910:-1
position: 810910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811069:-1
position: 811069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:807568-807666:-1:exon

position:807666:-1
position: 807666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAKD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dephospho-CoA kinase domain-containing protein isoform X2
translation: MFLVGLSGGIASGKSTVVAVLRELGCAVIDADVIAREVVQPRLKAYQQIVHYFGPEILLESGEINREALGNIIFSHPEKRRLLNSITHPEIQKEMLKQVLKYFVLGYRYVILDIPLLFETKRLTKFMKHTVLVYCDPQTQLARLMKRNGLSQAEAEARIASQLPLDEKRRMAAHIIDNSGDRESTRQQLHVAVTVPRHYSTSSLDWKTPH
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(807598..807666,810910..811069,811151..811238,812746..812949,814420..814531))
location: region:807598-814531:-1
so has part: feature:814420-814531:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810910-811069:-1:exon
so has part: feature:807598-807666:-1:exon

XP_015740939.1
type: Protein
SIO_000068: ncbiprotein

position:807598:-1
position: 807598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814531:-1
position: 814531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814420-814531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812746-812949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811151-811238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810910-811069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807598-807666:-1:exon

DCAKD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCAKD
product: dephospho-CoA kinase domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_032449391.1
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(810068..811069,811151..811238,812746..812949,814420..814537,814846..814956,816512..816638))
location: region:810068-816638:-1
so has part: feature:816512-816638:-1:exon
so has part: feature:814846-814956:-1:exon
so has part: feature:814420-814537:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810068-811069:-1:exon

position:810068:-1
position: 810068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816512-816638:-1:exon

position:816512:-1
position: 816512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814846-814956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:814420-814537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812746-812949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811151-811238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810068-811069:-1:exon

DCAKD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCAKD
product: dephospho-CoA kinase domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_015885452.1
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(810068..811069,811151..811238,812746..812949,814420..814537,814846..814956,816310..816505))
location: region:810068-816505:-1
so has part: feature:816310-816505:-1:exon
so has part: feature:814846-814956:-1:exon
so has part: feature:814420-814537:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810068-811069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816310-816505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814846-814956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:814420-814537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812746-812949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811151-811238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810068-811069:-1:exon

DCAKD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dephospho-CoA kinase domain-containing protein isoform X1
translation: MFLVGLSGGIASGKSTVVAVLRELGCAVIDADVIAREVVQPRLKAYQQIVHYFGPEILLESGEINREALGNIIFSHPEKRRLLNSITHPEIQKEMLKQVLKYFVLGYRYVILDIPLLFETKRLTKFMKHTVLVYCDPQTQLARLMKRNGLSQAEAEARIASQLPLDEKRRMAAHIIDNSGDRESTRQQVLRLHARLEGSLDFLWARLVVGTAVAALGGLLYILLQHFIS
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(810784..811069,811151..811238,812746..812949,814420..814531))
location: region:810784-814531:-1
so has part: feature:814420-814531:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810784-811069:-1:exon

XP_015740938.1
type: Protein
SIO_000068: ncbiprotein

position:810784:-1
position: 810784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814420-814531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812746-812949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811151-811238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810784-811069:-1:exon

DCAKD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dephospho-CoA kinase domain-containing protein isoform X1
translation: MFLVGLSGGIASGKSTVVAVLRELGCAVIDADVIAREVVQPRLKAYQQIVHYFGPEILLESGEINREALGNIIFSHPEKRRLLNSITHPEIQKEMLKQVLKYFVLGYRYVILDIPLLFETKRLTKFMKHTVLVYCDPQTQLARLMKRNGLSQAEAEARIASQLPLDEKRRMAAHIIDNSGDRESTRQQVLRLHARLEGSLDFLWARLVVGTAVAALGGLLYILLQHFIS
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(810784..811069,811151..811238,812746..812949,814420..814531))
location: region:810784-814531:-1
so has part: feature:814420-814531:-1:exon
so has part: feature:812746-812949:-1:exon
so has part: feature:811151-811238:-1:exon
so has part: feature:810784-811069:-1:exon

XP_032305282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:814420-814531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812746-812949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811151-811238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810784-811069:-1:exon

NMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 816752..827521
location: region:816752-827521:1
so has part: feature:816752-827521:1:exon
subclass of: SO_0000010

107325008
type: Gene
SIO_000068: ncbigene

position:816752:1
position: 816752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827521:1
position: 827521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816752-827521:1:exon

NMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NMT1
product: N-myristoyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015885450.2
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: join(816752..816932,821121..821229,821765..821909,822781..822899,823086..823177,823600..823716,824115..824285,824655..824763,825328..825498,826058..826225,826360..826497,827243..827521)
location: region:816752-827521:1
so has part: feature:816752-816932:1:exon
so has part: feature:821121-821229:1:exon
so has part: feature:821765-821909:1:exon
so has part: feature:822781-822899:1:exon
so has part: feature:823086-823177:1:exon
so has part: feature:823600-823716:1:exon
so has part: feature:824115-824285:1:exon
so has part: feature:824655-824763:1:exon
so has part: feature:825328-825498:1:exon
so has part: feature:826058-826225:1:exon
so has part: feature:826360-826497:1:exon
so has part: feature:827243-827521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816752-816932:1:exon

position:816932:1
position: 816932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821121-821229:1:exon

position:821121:1
position: 821121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821229:1
position: 821229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:821765-821909:1:exon

position:821765:1
position: 821765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821909:1
position: 821909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822781-822899:1:exon

position:822781:1
position: 822781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822899:1
position: 822899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:823086-823177:1:exon

position:823086:1
position: 823086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823177:1
position: 823177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:823600-823716:1:exon

position:823600:1
position: 823600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823716:1
position: 823716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:824115-824285:1:exon

position:824115:1
position: 824115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824285:1
position: 824285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:824655-824763:1:exon

position:824655:1
position: 824655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824763:1
position: 824763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:825328-825498:1:exon

position:825328:1
position: 825328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825498:1
position: 825498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:826058-826225:1:exon

position:826058:1
position: 826058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826225:1
position: 826225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:826360-826497:1:exon

position:826360:1
position: 826360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826497:1
position: 826497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:827243-827521:1:exon

position:827243:1
position: 827243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 1
translation: MADDSETAARRPPAKPHRPSAEENEHEHCSDCENEAERGSKRGGLSPANDSGAKKKKKKPKRKKEKGDQPDQAQDQPMKVNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSKKLVGFISAIPATIHIYETEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTPGLRPMEHKDIPAVHKLLTEYLKHFHLTPVMSREEVEHWFLPQENIIDTFVVESAPGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTKTPLIDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMAPEKVGLVLQ
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: join(816805..816932,821121..821229,821765..821909,822781..822899,823086..823177,823600..823716,824115..824285,824655..824763,825328..825498,826058..826225,826360..826497,827243..827263)
location: region:816805-827263:1
so has part: feature:816805-816932:1:exon
so has part: feature:821121-821229:1:exon
so has part: feature:821765-821909:1:exon
so has part: feature:822781-822899:1:exon
so has part: feature:823086-823177:1:exon
so has part: feature:823600-823716:1:exon
so has part: feature:824115-824285:1:exon
so has part: feature:824655-824763:1:exon
so has part: feature:825328-825498:1:exon
so has part: feature:826058-826225:1:exon
so has part: feature:826360-826497:1:exon
so has part: feature:827243-827263:1:exon

XP_015740936.1
type: Protein
SIO_000068: ncbiprotein

position:816805:1
position: 816805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827263:1
position: 827263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816805-816932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821121-821229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:821765-821909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822781-822899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823086-823177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823600-823716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:824115-824285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824655-824763:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825328-825498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:826058-826225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826360-826497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827243-827263:1:exon

PLCD3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(828305..837783)
location: region:828305-837783:-1
so has part: feature:828305-837783:-1:exon
subclass of: SO_0000010

107325007
type: Gene
SIO_000068: ncbigene

position:828305:-1
position: 828305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837783:-1
position: 837783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828305-837783:-1:exon

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PLCD3
product: phospholipase C delta 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_015885445.1
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828305..828854,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830866,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837783))
location: region:828305-837783:-1
so has part: feature:837651-837783:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830866:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828305-828854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837783:-1:exon

position:837651:-1
position: 837651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

position:835307:-1
position: 835307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835465:-1
position: 835465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

position:833518:-1
position: 833518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833746:-1
position: 833746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

position:832904:-1
position: 832904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833033:-1
position: 833033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

position:832294:-1
position: 832294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832519:-1
position: 832519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

position:831442:-1
position: 831442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831643:-1
position: 831643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

position:831163:-1
position: 831163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831307:-1
position: 831307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

position:830937:-1
position: 830937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831089:-1
position: 831089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830866:-1:exon

position:830744:-1
position: 830744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830866:-1
position: 830866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

position:830338:-1
position: 830338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830497:-1
position: 830497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

position:829840:-1
position: 829840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829956:-1
position: 829956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

position:829620:-1
position: 829620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829768:-1
position: 829768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

position:829305:-1
position: 829305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829476:-1
position: 829476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

position:828905:-1
position: 828905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829054:-1
position: 829054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:828305-828854:-1:exon

position:828854:-1
position: 828854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PLCD3
product: phospholipase C delta 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_015885447.1
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828305..828854,828905..829054,829341..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837783))
location: region:828305-837783:-1
so has part: feature:837651-837783:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829341-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828305-828854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

position:830869:-1
position: 830869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829341-829476:-1:exon

position:829341:-1
position: 829341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828305-828854:-1:exon

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PLCD3
product: phospholipase C delta 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_015885446.1
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828305..828836,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837783))
location: region:828305-837783:-1
so has part: feature:837651-837783:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828305-828836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828305-828836:-1:exon

position:828836:-1
position: 828836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PLCD3
product: phospholipase C delta 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_015885444.1
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828305..828854,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837783))
location: region:828305-837783:-1
so has part: feature:837651-837783:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828305-828854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828305-828854:-1:exon

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PLCD3
product: phospholipase C delta 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_015885448.2
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828305..828836,828905..829054,829341..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837782))
location: region:828305-837782:-1
so has part: feature:837651-837782:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829341-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828305-828836:-1:exon

position:837782:-1
position: 837782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829341-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828305-828836:-1:exon

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 isoform X2
translation: MICGRRARRRPEQSGGVLKKLGLYEDKDLQLMLQGSLLCKVRSRRAKERLYRLQEDGITVVSERRFGRVPSKHSFSVAHITSVRRGHHSEGLRRYGRAIPEQNCFTITFEGGRRSLDLGARDEDVVLSWVRGLRTLRGRLQGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDRELEDFCRRLLRRPELEELFGRYSGEDCVLSAEELRDFLKDQGEEGTLHQACAIICAHELNEKARQQELMTLDGFTMYLLSAAGDILNQEHTQVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPLICHGHAFTSKILFRDVIEAIRDHAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPSVLPSPELKGKVLVKGKKLLELQREPCGVISILDEEEEEETEDEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQHPRPYEMSSFSERKARKLIKEAGPSFVRYTSQQLSRVYPLGLKMTSSNYNPQEMWNVGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSCSPRPLMLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGDPIVVPIPHSAGFNPRWEETLTFQLQVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREVSALSPGYRHVHLLSKDGASLSPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828748..828854,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830866,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837714))
location: region:828748-837714:-1
so has part: feature:837651-837714:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830866:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828748-828854:-1:exon

XP_015740931.1
type: Protein
SIO_000068: ncbiprotein

position:828748:-1
position: 828748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837714:-1
position: 837714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830866:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828748-828854:-1:exon

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 isoform X5
translation: MICGRRARRRPEQSGGVLKKLGLYEDKDLQLMLQGSLLCKVRSRRAKERLYRLQEDGITVVSERRFGRVPSKHSFSVAHITSVRRGHHSEGLRRYGRAIPEQNCFTITFEGGRRSLDLGARDEDVVLSWVRGLRTLRGRLQGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDRELEDFCRRLLRRPELEELFGRYSGEDCVLSAEELRDFLKDQGEEGTLHQACAIICAHELNEKARQQELMTLDGFTMYLLSAAGDILNQEHTQVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPLICHGHAFTSKILFRDVIEAIRDHAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPSVLPSPEQLKGKVLVKGKKLLELQREPCGVISILDEEEEEETEDEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQHPRPYEMSSFSERKARKLIKEAGPSFVRYTSQQLSRVYPLGLKMTSSNYNPQEMWNVGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSCSPRPLMLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGFNPRWEETLTFQLQVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREGYRHVHLLSKDGASLSPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828748..828836,828905..829054,829341..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837714))
location: region:828748-837714:-1
so has part: feature:837651-837714:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829341-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828748-828836:-1:exon

XP_015740934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829341-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828748-828836:-1:exon

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 isoform X4
translation: MICGRRARRRPEQSGGVLKKLGLYEDKDLQLMLQGSLLCKVRSRRAKERLYRLQEDGITVVSERRFGRVPSKHSFSVAHITSVRRGHHSEGLRRYGRAIPEQNCFTITFEGGRRSLDLGARDEDVVLSWVRGLRTLRGRLQGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDRELEDFCRRLLRRPELEELFGRYSGEDCVLSAEELRDFLKDQGEEGTLHQACAIICAHELNEKARQQELMTLDGFTMYLLSAAGDILNQEHTQVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPLICHGHAFTSKILFRDVIEAIRDHAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPSVLPSPEQLKGKVLVKGKKLLELQREPCGVISILDEEEEEETEDEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQHPRPYEMSSFSERKARKLIKEAGPSFVRYTSQQLSRVYPLGLKMTSSNYNPQEMWNVGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSCSPRPLMLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGFNPRWEETLTFQLQVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREVSALSPGYRHVHLLSKDGASLSPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828748..828854,828905..829054,829341..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837714))
location: region:828748-837714:-1
so has part: feature:837651-837714:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829341-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828748-828854:-1:exon

XP_015740933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829341-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828748-828854:-1:exon

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 isoform X3
translation: MICGRRARRRPEQSGGVLKKLGLYEDKDLQLMLQGSLLCKVRSRRAKERLYRLQEDGITVVSERRFGRVPSKHSFSVAHITSVRRGHHSEGLRRYGRAIPEQNCFTITFEGGRRSLDLGARDEDVVLSWVRGLRTLRGRLQGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDRELEDFCRRLLRRPELEELFGRYSGEDCVLSAEELRDFLKDQGEEGTLHQACAIICAHELNEKARQQELMTLDGFTMYLLSAAGDILNQEHTQVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPLICHGHAFTSKILFRDVIEAIRDHAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPSVLPSPEQLKGKVLVKGKKLLELQREPCGVISILDEEEEEETEDEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQHPRPYEMSSFSERKARKLIKEAGPSFVRYTSQQLSRVYPLGLKMTSSNYNPQEMWNVGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSCSPRPLMLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGDPIVVPIPHSAGFNPRWEETLTFQLQVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREGYRHVHLLSKDGASLSPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828748..828836,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837714))
location: region:828748-837714:-1
so has part: feature:837651-837714:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828748-828836:-1:exon

XP_015740932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828748-828836:-1:exon

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 isoform X1
translation: MICGRRARRRPEQSGGVLKKLGLYEDKDLQLMLQGSLLCKVRSRRAKERLYRLQEDGITVVSERRFGRVPSKHSFSVAHITSVRRGHHSEGLRRYGRAIPEQNCFTITFEGGRRSLDLGARDEDVVLSWVRGLRTLRGRLQGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDRELEDFCRRLLRRPELEELFGRYSGEDCVLSAEELRDFLKDQGEEGTLHQACAIICAHELNEKARQQELMTLDGFTMYLLSAAGDILNQEHTQVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPLICHGHAFTSKILFRDVIEAIRDHAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPSVLPSPEQLKGKVLVKGKKLLELQREPCGVISILDEEEEEETEDEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQHPRPYEMSSFSERKARKLIKEAGPSFVRYTSQQLSRVYPLGLKMTSSNYNPQEMWNVGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSCSPRPLMLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGDPIVVPIPHSAGFNPRWEETLTFQLQVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREVSALSPGYRHVHLLSKDGASLSPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(828748..828854,828905..829054,829305..829476,829620..829768,829840..829956,830338..830497,830744..830869,830937..831089,831163..831307,831442..831643,832294..832519,832904..833033,833518..833746,835307..835465,837651..837714))
location: region:828748-837714:-1
so has part: feature:837651-837714:-1:exon
so has part: feature:835307-835465:-1:exon
so has part: feature:833518-833746:-1:exon
so has part: feature:832904-833033:-1:exon
so has part: feature:832294-832519:-1:exon
so has part: feature:831442-831643:-1:exon
so has part: feature:831163-831307:-1:exon
so has part: feature:830937-831089:-1:exon
so has part: feature:830744-830869:-1:exon
so has part: feature:830338-830497:-1:exon
so has part: feature:829840-829956:-1:exon
so has part: feature:829620-829768:-1:exon
so has part: feature:829305-829476:-1:exon
so has part: feature:828905-829054:-1:exon
so has part: feature:828748-828854:-1:exon

XP_015740930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837651-837714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835307-835465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833518-833746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832904-833033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832294-832519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831442-831643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831163-831307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830937-831089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830744-830869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830338-830497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829840-829956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829620-829768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829305-829476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828905-829054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828748-828854:-1:exon

ACBD4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 839412..845384
location: region:839412-845384:1
so has part: feature:839412-845384:1:exon
subclass of: SO_0000010

107324989
type: Gene
SIO_000068: ncbigene

position:839412:1
position: 839412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845384:1
position: 845384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839412-845384:1:exon

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ACBD4
product: acyl-CoA binding domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449348.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: join(839412..839546,839649..839769,839849..840035,842281..842407,842998..843104,843286..843427,844196..844365,844781..844819,845069..845384)
location: region:839412-845384:1
so has part: feature:839412-839546:1:exon
so has part: feature:839649-839769:1:exon
so has part: feature:839849-840035:1:exon
so has part: feature:842281-842407:1:exon
so has part: feature:842998-843104:1:exon
so has part: feature:843286-843427:1:exon
so has part: feature:844196-844365:1:exon
so has part: feature:844781-844819:1:exon
so has part: feature:845069-845384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839412-839546:1:exon

position:839546:1
position: 839546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:839649-839769:1:exon

position:839649:1
position: 839649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839769:1
position: 839769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839849-840035:1:exon

position:839849:1
position: 839849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840035:1
position: 840035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842281-842407:1:exon

position:842281:1
position: 842281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842407:1
position: 842407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:842998-843104:1:exon

position:842998:1
position: 842998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843104:1
position: 843104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:843286-843427:1:exon

position:843286:1
position: 843286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843427:1
position: 843427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844196-844365:1:exon

position:844196:1
position: 844196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844365:1
position: 844365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:844781-844819:1:exon

position:844781:1
position: 844781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844819:1
position: 844819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:845069-845384:1:exon

position:845069:1
position: 845069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4
translation: MADPGCGAQFQAAVRVIQGLPRSGSYRPSYEEMLRFYSYYKQATAGRCQEPRPGFWDPIGRYKWDAWHSLGRMSREEAMAAYVAEMKKVAQKVTGAAGGAHTGHTHTDTHTDTHTHTHTHRHTHTDLCCLSLPADEQQQQQQPAEQGQEERESQESLQDELPQEQQEPGAGPAPAADTHQGSQGTSDSEGEVFSDPMEQMEHQQAGRLLAERGPVPKSGPAGCEAGRAERGEGRRREGSGGADLAARGADGERLVEDDAGSPAEPRAAEQLPLPELDAHVAVTVRALQDDMKRVLERLSELELLASTQDPAGADPEELLVQAESPWPLPASPHTLLFLVAWPFVTQWLLRRWRGRKR
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: join(839477..839546,839649..839769,839849..840035,842281..842407,842998..843104,843286..843427,844196..844365,844781..844819,845069..845179)
location: region:839477-845179:1
so has part: feature:839477-839546:1:exon
so has part: feature:839649-839769:1:exon
so has part: feature:839849-840035:1:exon
so has part: feature:842281-842407:1:exon
so has part: feature:842998-843104:1:exon
so has part: feature:843286-843427:1:exon
so has part: feature:844196-844365:1:exon
so has part: feature:844781-844819:1:exon
so has part: feature:845069-845179:1:exon

XP_032305239.1
type: Protein
SIO_000068: ncbiprotein

position:839477:1
position: 839477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845179:1
position: 845179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839477-839546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839649-839769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839849-840035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842281-842407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842998-843104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843286-843427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844196-844365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844781-844819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845069-845179:1:exon

HEXIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: HEXIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 846269..847576
location: region:846269-847576:1
so has part: feature:846269-847576:1:exon
subclass of: SO_0000010

107325029
type: Gene
SIO_000068: ncbigene

position:846269:1
position: 846269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847576:1
position: 847576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846269-847576:1:exon

HEXIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HEXIM1
product: HEXIM P-TEFb complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885499.1
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: 846269..847576
location: region:846269-847576:1
so has part: feature:846269-847576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846269-847576:1:exon

HEXIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HEXIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein HEXIM1
translation: MADAERAPEAAPADPERGEAQPDGDGDGGRLQHRQDAAEAAGDAGDHEARPAEGGEGQPGLRPRYRAAVGRAQEWPAKKKHRRRPSKNKRRWKPYSKLSWEEKQQFDERQSLRASRLRAEMFAKGQPVAPYNTTQFLMEDHDQEEPDLKTGLYPRRNAAKSDDTSEEDFLEEAAEEDGGSDGMGGDGSEFLQRDFSETYERYHVESLQNMSKQELVKEYLELEKCLSRMEDENNRLRMESKKHGEAAEAARLLELEVDRLRAENLQLLRERDVRAAEAAPE
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: 846451..847296
location: region:846451-847296:1
so has part: feature:846451-847296:1:exon

XP_015740985.1
type: Protein
SIO_000068: ncbiprotein

position:846451:1
position: 846451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847296:1
position: 847296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846451-847296:1:exon

LOC107324990
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(847545..850810)
location: region:847545-850810:-1
so has part: feature:847545-850810:-1:exon
subclass of: SO_0000010

107324990
type: Gene
SIO_000068: ncbigene

position:847545:-1
position: 847545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850810:-1
position: 850810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847545-850810:-1:exon

LOC107324990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324990
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449349.1
SIO_010081: LOC107324990
subclass of: SO_0000673
so part of: LOC107324990
location: complement(join(847545..847806,847917..848043,848393..848559,850465..850670,850774..850810))
location: region:847545-850810:-1
so has part: feature:850774-850810:-1:exon
so has part: feature:850465-850670:-1:exon
so has part: feature:848393-848559:-1:exon
so has part: feature:847917-848043:-1:exon
so has part: feature:847545-847806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850774-850810:-1:exon

position:850774:-1
position: 850774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850465-850670:-1:exon

position:850465:-1
position: 850465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850670:-1
position: 850670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:848393-848559:-1:exon

position:848393:-1
position: 848393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848559:-1
position: 848559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847917-848043:-1:exon

position:847917:-1
position: 847917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848043:-1
position: 848043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:847545-847806:-1:exon

position:847806:-1
position: 847806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: METHSAQAQSRTAQPFPFLYTSPSYWLRRHIRQQYGGARLVGRRAGRGGGNGGRAGGVRARPPFCVCGGSRPASLPVTTGPVPGAVGAARARTLRCTGRSRVRPVRRCGAPGGAGASAGRCAAAAAAAAPRAMAANECGAASSASCSIAPILPSVTQQRLSPFAVPIPPSAPRPVPPPQERLWGAPEEEEAGKRVEPLDERIAAASKALREV
SIO_010081: LOC107324990
subclass of: SO_0000673
so part of: LOC107324990
location: complement(join(847705..847806,847917..848043,848393..848559,850465..850670,850774..850810))
location: region:847705-850810:-1
so has part: feature:850774-850810:-1:exon
so has part: feature:850465-850670:-1:exon
so has part: feature:848393-848559:-1:exon
so has part: feature:847917-848043:-1:exon
so has part: feature:847705-847806:-1:exon

XP_032305240.1
type: Protein
SIO_000068: ncbiprotein

position:847705:-1
position: 847705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850774-850810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850465-850670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:848393-848559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847917-848043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847705-847806:-1:exon

LOC107325036
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 852717..857128
location: region:852717-857128:1
so has part: feature:852717-857128:1:exon
subclass of: SO_0000010

107325036
type: Gene
SIO_000068: ncbigene

position:852717:1
position: 852717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857128:1
position: 857128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852717-857128:1:exon

LOC107325036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325036
product: myosin light chain kinase, smooth muscle-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032449377.1
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(852717..852979,853122..853377,853854..853954,854360..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..857128)
location: region:852717-857128:1
so has part: feature:852717-852979:1:exon
so has part: feature:853122-853377:1:exon
so has part: feature:853854-853954:1:exon
so has part: feature:854360-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-857128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852717-852979:1:exon

position:852979:1
position: 852979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853122-853377:1:exon

position:853122:1
position: 853122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853377:1
position: 853377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853854-853954:1:exon

position:853854:1
position: 853854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853954:1
position: 853954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854360-854477:1:exon

position:854360:1
position: 854360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854477:1
position: 854477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:854632-854719:1:exon

position:854632:1
position: 854632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854719:1
position: 854719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854837-855040:1:exon

position:854837:1
position: 854837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855040:1
position: 855040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:855154-855371:1:exon

position:855154:1
position: 855154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855371:1
position: 855371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:855501-855624:1:exon

position:855501:1
position: 855501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855624:1
position: 855624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855701-855853:1:exon

position:855701:1
position: 855701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855853:1
position: 855853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:856060-856180:1:exon

position:856060:1
position: 856060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856180:1
position: 856180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:856264-856354:1:exon

position:856264:1
position: 856264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856354:1
position: 856354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:856736-857128:1:exon

position:856736:1
position: 856736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325036
product: myosin light chain kinase, smooth muscle-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015885515.2
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(852717..852979,853125..853379,853854..853954,854360..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..857128)
location: region:852717-857128:1
so has part: feature:852717-852979:1:exon
so has part: feature:853125-853379:1:exon
so has part: feature:853854-853954:1:exon
so has part: feature:854360-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-857128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852717-852979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853125-853379:1:exon

position:853125:1
position: 853125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853379:1
position: 853379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853854-853954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854360-854477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:856736-857128:1:exon

LOC107325036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325036
product: myosin light chain kinase, smooth muscle-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015885516.2
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(852717..852979,853280..853379,853854..853954,854360..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..857128)
location: region:852717-857128:1
so has part: feature:852717-852979:1:exon
so has part: feature:853280-853379:1:exon
so has part: feature:853854-853954:1:exon
so has part: feature:854360-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-857128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852717-852979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853280-853379:1:exon

position:853280:1
position: 853280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853854-853954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854360-854477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:856736-857128:1:exon

LOC107325036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325036
product: myosin light chain kinase, smooth muscle-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015885513.2
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(853445..853513,853854..853954,854360..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..857128)
location: region:853445-857128:1
so has part: feature:853445-853513:1:exon
so has part: feature:853854-853954:1:exon
so has part: feature:854360-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-857128:1:exon

position:853445:1
position: 853445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853445-853513:1:exon

position:853513:1
position: 853513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853854-853954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854360-854477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:856736-857128:1:exon

LOC107325036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325036
product: myosin light chain kinase, smooth muscle-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015885517.2
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(853482..853508,853854..853954,854360..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..857128)
location: region:853482-857128:1
so has part: feature:853482-853508:1:exon
so has part: feature:853854-853954:1:exon
so has part: feature:854360-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-857128:1:exon

position:853482:1
position: 853482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853482-853508:1:exon

position:853508:1
position: 853508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853854-853954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854360-854477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:856736-857128:1:exon

LOC107325036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAEGEEDFECCDVVINSQDKVSDVYIQLEKLGEGKFGTVYRLQEKTTGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPGSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGFATDMWSVGVICYILLSGESPFQGDNDMETLSNITAAQWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQSQDRRASETQDEEDSCCSAEEDQACGALPQRDPSSSEPPTGEEGNGSMKAAGKA
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(854462..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..856860)
location: region:854462-856860:1
so has part: feature:854462-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-856860:1:exon

XP_015740999.1
type: Protein
SIO_000068: ncbiprotein

position:854462:1
position: 854462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856860:1
position: 856860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854462-854477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856736-856860:1:exon

LOC107325036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAEGEEDFECCDVVINSQDKVSDVYIQLEKLGEGKFGTVYRLQEKTTGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPGSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGFATDMWSVGVICYILLSGESPFQGDNDMETLSNITAAQWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQSQDRRASETQDEEDSCCSAEEDQACGALPQRDPSSSEPPTGEEGNGSMKAAGKA
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(854462..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..856860)
location: region:854462-856860:1
so has part: feature:854462-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-856860:1:exon

XP_015741001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854462-854477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856736-856860:1:exon

LOC107325036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAEGEEDFECCDVVINSQDKVSDVYIQLEKLGEGKFGTVYRLQEKTTGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPGSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGFATDMWSVGVICYILLSGESPFQGDNDMETLSNITAAQWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQSQDRRASETQDEEDSCCSAEEDQACGALPQRDPSSSEPPTGEEGNGSMKAAGKA
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(854462..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..856860)
location: region:854462-856860:1
so has part: feature:854462-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-856860:1:exon

XP_015741002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854462-854477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856736-856860:1:exon

LOC107325036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAEGEEDFECCDVVINSQDKVSDVYIQLEKLGEGKFGTVYRLQEKTTGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPGSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGFATDMWSVGVICYILLSGESPFQGDNDMETLSNITAAQWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQSQDRRASETQDEEDSCCSAEEDQACGALPQRDPSSSEPPTGEEGNGSMKAAGKA
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(854462..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..856860)
location: region:854462-856860:1
so has part: feature:854462-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-856860:1:exon

XP_015741003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854462-854477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856736-856860:1:exon

LOC107325036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAEGEEDFECCDVVINSQDKVSDVYIQLEKLGEGKFGTVYRLQEKTTGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPGSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGFATDMWSVGVICYILLSGESPFQGDNDMETLSNITAAQWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQSQDRRASETQDEEDSCCSAEEDQACGALPQRDPSSSEPPTGEEGNGSMKAAGKA
SIO_010081: LOC107325036
subclass of: SO_0000673
so part of: LOC107325036
location: join(854462..854477,854632..854719,854837..855040,855154..855371,855501..855624,855701..855853,856060..856180,856264..856354,856736..856860)
location: region:854462-856860:1
so has part: feature:854462-854477:1:exon
so has part: feature:854632-854719:1:exon
so has part: feature:854837-855040:1:exon
so has part: feature:855154-855371:1:exon
so has part: feature:855501-855624:1:exon
so has part: feature:855701-855853:1:exon
so has part: feature:856060-856180:1:exon
so has part: feature:856264-856354:1:exon
so has part: feature:856736-856860:1:exon

XP_032305268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854462-854477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854632-854719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854837-855040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855154-855371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855501-855624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855701-855853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856264-856354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856736-856860:1:exon

FMNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FMNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 863260..880859
location: region:863260-880859:1
so has part: feature:863260-880859:1:exon
subclass of: SO_0000010

107324991
type: Gene
SIO_000068: ncbigene

position:863260:1
position: 863260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880859:1
position: 880859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863260-880859:1:exon

FMNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FMNL1
product: formin like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449350.1
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: join(863260..863538,863728..864002,870901..870984,871278..871361,871453..871526,872120..872203,872432..872572,874045..874153,874434..874510,874583..874676,875009..875083,875463..875573,875684..875833,875935..876036,876137..876542,876579..876857,876943..877064,877617..877819,877908..878142,878231..878299,878384..878464,878914..879043,879155..879318,879444..879545,879779..879877,880083..880206,880502..880601,880747..880859)
location: region:863260-880859:1
so has part: feature:863260-863538:1:exon
so has part: feature:863728-864002:1:exon
so has part: feature:870901-870984:1:exon
so has part: feature:871278-871361:1:exon
so has part: feature:871453-871526:1:exon
so has part: feature:872120-872203:1:exon
so has part: feature:872432-872572:1:exon
so has part: feature:874045-874153:1:exon
so has part: feature:874434-874510:1:exon
so has part: feature:874583-874676:1:exon
so has part: feature:875009-875083:1:exon
so has part: feature:875463-875573:1:exon
so has part: feature:875684-875833:1:exon
so has part: feature:875935-876036:1:exon
so has part: feature:876137-876542:1:exon
so has part: feature:876579-876857:1:exon
so has part: feature:876943-877064:1:exon
so has part: feature:877617-877819:1:exon
so has part: feature:877908-878142:1:exon
so has part: feature:878231-878299:1:exon
so has part: feature:878384-878464:1:exon
so has part: feature:878914-879043:1:exon
so has part: feature:879155-879318:1:exon
so has part: feature:879444-879545:1:exon
so has part: feature:879779-879877:1:exon
so has part: feature:880083-880206:1:exon
so has part: feature:880502-880601:1:exon
so has part: feature:880747-880859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863260-863538:1:exon

position:863538:1
position: 863538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863728-864002:1:exon

position:863728:1
position: 863728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864002:1
position: 864002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870901-870984:1:exon

position:870901:1
position: 870901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870984:1
position: 870984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:871278-871361:1:exon

position:871278:1
position: 871278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871361:1
position: 871361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:871453-871526:1:exon

position:871453:1
position: 871453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871526:1
position: 871526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872120-872203:1:exon

position:872120:1
position: 872120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872203:1
position: 872203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872432-872572:1:exon

position:872432:1
position: 872432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872572:1
position: 872572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:874045-874153:1:exon

position:874045:1
position: 874045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874153:1
position: 874153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:874434-874510:1:exon

position:874434:1
position: 874434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874510:1
position: 874510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:874583-874676:1:exon

position:874583:1
position: 874583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874676:1
position: 874676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:875009-875083:1:exon

position:875009:1
position: 875009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875083:1
position: 875083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:875463-875573:1:exon

position:875463:1
position: 875463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875573:1
position: 875573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:875684-875833:1:exon

position:875684:1
position: 875684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875833:1
position: 875833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:875935-876036:1:exon

position:875935:1
position: 875935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876036:1
position: 876036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:876137-876542:1:exon

position:876137:1
position: 876137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876542:1
position: 876542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:876579-876857:1:exon

position:876579:1
position: 876579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876857:1
position: 876857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:876943-877064:1:exon

position:876943:1
position: 876943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877064:1
position: 877064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:877617-877819:1:exon

position:877617:1
position: 877617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877819:1
position: 877819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:877908-878142:1:exon

position:877908:1
position: 877908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878142:1
position: 878142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:878231-878299:1:exon

position:878231:1
position: 878231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878299:1
position: 878299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:878384-878464:1:exon

position:878384:1
position: 878384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878464:1
position: 878464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:878914-879043:1:exon

position:878914:1
position: 878914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879043:1
position: 879043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:879155-879318:1:exon

position:879155:1
position: 879155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879318:1
position: 879318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:879444-879545:1:exon

position:879444:1
position: 879444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879545:1
position: 879545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:879779-879877:1:exon

position:879779:1
position: 879779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879877:1
position: 879877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:880083-880206:1:exon

position:880083:1
position: 880083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880206:1
position: 880206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:880502-880601:1:exon

position:880502:1
position: 880502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880601:1
position: 880601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:880747-880859:1:exon

position:880747:1
position: 880747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FMNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FMNL1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: formin-like protein 1
translation: MLRGAMSLLSLSSPSFGCRGQKRKRGGLPAVPVALPIPIRLPPSLPYRNIIKTKPNPRRSPAPRSRGLWDPGAGLRQRAAAPLPAQPSSLQRDRSAPLHPRHPGHPGPGGSAMGNAAGGMEGAAARENRDPRAPGPAAVAASTAATPPRPPPPARQPMPAADELEERFSRVLSSMNLPPDKMKLLSQYDNEKKWELICDQERFQVKNPPSAYIQKLKSYLDTGGVSRKFKRRVQESTQVLRELEISLRTNYIGWVQEFLNEENKGLDVLLEYLAFAQCSVAYDMESTENGSPGSEKGKPLERSVEDLSKSNSSSPTHGISKVRHLTVRLNPSHSRKALRNSRIVNQKDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEITLSLNNRNARTKALVLELLAAVCLVRGGHDIILAAFDNFKEVCGEKNRFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDSLRLTESDKLQVQIQAYLDNVFDVGAMLEDSETKTAVLEHMEELEEHISQLTEKLQDAENDSMAKIAELEKQLSQARRELEALREQLSPPQPPSPPAPQPQECYRLALERRLAELEEKGLVQILRGPDGDVAIEIVPVVIETTAAPVVTGEATATSTGTAGAGKWRPPAVSPVSPSCLGQVAQRRGGGVFGAQQRRGDVPRGHPMAVGSWQWPRVLLRCSPAPAPAPAAPPPPPPPPPPLPGAEPGPPIPPPPLPXQTSPPPSPPLPGAQVXPPPPPPLPGGPEGSVPPPPPPPPLGGPPHAGPGAPPTANGSVKVKKPIQTKFRMPVFNWVALKPSQIDGTVFTELNDEKVLQELDMSDFEEQFKTKAQGPGLDISALKVKATQKAPSKVTLMESNRAKNLAITLRKGGRSIQDICTAIETYDQQALSLDFLELLLRFLPTEYERTLIGKFEREQQPLEELSEEDQFMIRFSKIPRLAERMNVMIFLGNFSDTAQLLMPQLNAIIAASMSLKSSSKLRNILEIVLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVRVITDKYPELTGFHTELHFLDKAGSVSLDGVLQDVRSLQQGMELTCKEFMRQDDSLVLKEFLKANTELMEKLQADSKTAKEAYESAVEYFGENPKTCPPTTFFPMFMRFIRAYKKAEQDIELWKKQEAAAKEAESGPPGSEEQPDMKSPFQKAKRQQMDMIAELKKKQMVKEPLIYEGKDGAIEDIISALKTVPFTARTGKRSSRLFCDVSFSEESPL
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: join(863298..863538,863728..864002,870901..870984,871278..871361,871453..871526,872120..872203,872432..872572,874045..874153,874434..874510,874583..874676,875009..875083,875463..875573,875684..875833,875935..876036,876137..876542,876579..876857,876943..877064,877617..877819,877908..878142,878231..878299,878384..878464,878914..879043,879155..879318,879444..879545,879779..879877,880083..880206,880502..880593)
location: region:863298-880593:1
so has part: feature:863298-863538:1:exon
so has part: feature:863728-864002:1:exon
so has part: feature:870901-870984:1:exon
so has part: feature:871278-871361:1:exon
so has part: feature:871453-871526:1:exon
so has part: feature:872120-872203:1:exon
so has part: feature:872432-872572:1:exon
so has part: feature:874045-874153:1:exon
so has part: feature:874434-874510:1:exon
so has part: feature:874583-874676:1:exon
so has part: feature:875009-875083:1:exon
so has part: feature:875463-875573:1:exon
so has part: feature:875684-875833:1:exon
so has part: feature:875935-876036:1:exon
so has part: feature:876137-876542:1:exon
so has part: feature:876579-876857:1:exon
so has part: feature:876943-877064:1:exon
so has part: feature:877617-877819:1:exon
so has part: feature:877908-878142:1:exon
so has part: feature:878231-878299:1:exon
so has part: feature:878384-878464:1:exon
so has part: feature:878914-879043:1:exon
so has part: feature:879155-879318:1:exon
so has part: feature:879444-879545:1:exon
so has part: feature:879779-879877:1:exon
so has part: feature:880083-880206:1:exon
so has part: feature:880502-880593:1:exon

XP_032305241.1
type: Protein
SIO_000068: ncbiprotein

position:863298:1
position: 863298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880593:1
position: 880593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863298-863538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863728-864002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870901-870984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871278-871361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871453-871526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872120-872203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872432-872572:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874045-874153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874434-874510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874583-874676:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:875009-875083:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875463-875573:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:875684-875833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:875935-876036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:876137-876542:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:876579-876857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:876943-877064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:877617-877819:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:877908-878142:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:878231-878299:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:878384-878464:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:878914-879043:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:879155-879318:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879444-879545:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:879779-879877:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:880083-880206:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:880502-880593:1:exon

MAP3K14
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(880744..895115)
location: region:880744-895115:-1
so has part: feature:880744-895115:-1:exon
subclass of: SO_0000010

107325016
type: Gene
SIO_000068: ncbigene

position:880744:-1
position: 880744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895115:-1
position: 895115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880744-895115:-1:exon

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_015885466.2
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(880744..883211,883726..883826,884327..884471,885152..885258,885475..885819,886393..886543,886887..887050,887680..887784,888160..888291,888905..889034,889521..889658,890060..890668,890784..890994,891333..891402,891880..892150,894994..895115))
location: region:880744-895115:-1
so has part: feature:894994-895115:-1:exon
so has part: feature:891880-892150:-1:exon
so has part: feature:891333-891402:-1:exon
so has part: feature:890784-890994:-1:exon
so has part: feature:890060-890668:-1:exon
so has part: feature:889521-889658:-1:exon
so has part: feature:888905-889034:-1:exon
so has part: feature:888160-888291:-1:exon
so has part: feature:887680-887784:-1:exon
so has part: feature:886887-887050:-1:exon
so has part: feature:886393-886543:-1:exon
so has part: feature:885475-885819:-1:exon
so has part: feature:885152-885258:-1:exon
so has part: feature:884327-884471:-1:exon
so has part: feature:883726-883826:-1:exon
so has part: feature:880744-883211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894994-895115:-1:exon

position:894994:-1
position: 894994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891880-892150:-1:exon

position:891880:-1
position: 891880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892150:-1
position: 892150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891333-891402:-1:exon

position:891333:-1
position: 891333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891402:-1
position: 891402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890784-890994:-1:exon

position:890784:-1
position: 890784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890994:-1
position: 890994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890060-890668:-1:exon

position:890060:-1
position: 890060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890668:-1
position: 890668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889521-889658:-1:exon

position:889521:-1
position: 889521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889658:-1
position: 889658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:888905-889034:-1:exon

position:888905:-1
position: 888905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889034:-1
position: 889034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:888160-888291:-1:exon

position:888160:-1
position: 888160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888291:-1
position: 888291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:887680-887784:-1:exon

position:887680:-1
position: 887680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887784:-1
position: 887784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:886887-887050:-1:exon

position:886887:-1
position: 886887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887050:-1
position: 887050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:886393-886543:-1:exon

position:886393:-1
position: 886393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886543:-1
position: 886543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:885475-885819:-1:exon

position:885475:-1
position: 885475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885819:-1
position: 885819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:885152-885258:-1:exon

position:885152:-1
position: 885152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885258:-1
position: 885258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:884327-884471:-1:exon

position:884327:-1
position: 884327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884471:-1
position: 884471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:883726-883826:-1:exon

position:883726:-1
position: 883726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883826:-1
position: 883826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:880744-883211:-1:exon

position:883211:-1
position: 883211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015885467.2
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(880744..883211,883726..883826,884327..884471,885152..885258,885475..885819,886393..886543,886887..887050,887680..887784,888160..888291,888905..889034,889521..889658,890060..890668,890784..890994,891333..891402,891880..892150,893017..894745))
location: region:880744-894745:-1
so has part: feature:893017-894745:-1:exon
so has part: feature:891880-892150:-1:exon
so has part: feature:891333-891402:-1:exon
so has part: feature:890784-890994:-1:exon
so has part: feature:890060-890668:-1:exon
so has part: feature:889521-889658:-1:exon
so has part: feature:888905-889034:-1:exon
so has part: feature:888160-888291:-1:exon
so has part: feature:887680-887784:-1:exon
so has part: feature:886887-887050:-1:exon
so has part: feature:886393-886543:-1:exon
so has part: feature:885475-885819:-1:exon
so has part: feature:885152-885258:-1:exon
so has part: feature:884327-884471:-1:exon
so has part: feature:883726-883826:-1:exon
so has part: feature:880744-883211:-1:exon

position:894745:-1
position: 894745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893017-894745:-1:exon

position:893017:-1
position: 893017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891880-892150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891333-891402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890784-890994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890060-890668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889521-889658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888905-889034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888160-888291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887680-887784:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:886887-887050:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886393-886543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885475-885819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885152-885258:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884327-884471:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883726-883826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:880744-883211:-1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14
translation: MAVMGIVCHGAPAPPTKQQQELSATKGLHEAASEKQSSVCKVEDSKKAIFHSQWKILNDVITKGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSRSDSLDQIPNNVAHATEGRMAPTCWRGRHRGKARKKRHKKRSKLKIQTVAAGRRGPRTPEQESCTPIPVQEDETHHSALYRNSFWLSELNKNWLYDPPPFQKPEKVLSAGKLNSVGSQHKTDLHKLISPVQCLNHVWKLHYQRDNVPQPETVRPFPYNILPPPFPHLDSPIHPMKLNALETYFHHDLNYPDSEHRLSGLNLGFSFPKCVSQSMKSSLDKVSVEEYLVDALKGSVSLGEPQNLASLAKTWRGGGLDLKEQLQKADENEGVLLTEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKVEDKQTGFQCAAKKVQVEHFRAEELTTCAVITSPKVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQVLEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVLGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKMGLQKEPVQRASASELRTKASTALQEVGGVTSPWKGEYREPRRLALHKESNPQTSLPPAVSPASAAPDPDPAARGCCASPAPPPAPERTQQREGTRCNPSRELPRIWDPPPLSSPPLPLKSCSHTERTTTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPSVSDASEKNSMKASLSLRDTMSSGIHSWSSQTDGQSFSWNNVLSRSRHTDTPSCFNGVKIQIRLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKDGHPVHYDMEVPDSGIELQCTLAPDCSVSWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(883047..883211,883726..883826,884327..884471,885152..885258,885475..885819,886393..886543,886887..887050,887680..887784,888160..888291,888905..889034,889521..889658,890060..890668,890784..890994,891333..891402,891880..892132))
location: region:883047-892132:-1
so has part: feature:891880-892132:-1:exon
so has part: feature:891333-891402:-1:exon
so has part: feature:890784-890994:-1:exon
so has part: feature:890060-890668:-1:exon
so has part: feature:889521-889658:-1:exon
so has part: feature:888905-889034:-1:exon
so has part: feature:888160-888291:-1:exon
so has part: feature:887680-887784:-1:exon
so has part: feature:886887-887050:-1:exon
so has part: feature:886393-886543:-1:exon
so has part: feature:885475-885819:-1:exon
so has part: feature:885152-885258:-1:exon
so has part: feature:884327-884471:-1:exon
so has part: feature:883726-883826:-1:exon
so has part: feature:883047-883211:-1:exon

XP_015740952.1
type: Protein
SIO_000068: ncbiprotein

position:883047:-1
position: 883047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892132:-1
position: 892132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891880-892132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891333-891402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890784-890994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890060-890668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889521-889658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888905-889034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888160-888291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887680-887784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:886887-887050:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:886393-886543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885475-885819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885152-885258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884327-884471:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883726-883826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883047-883211:-1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14
translation: MAVMGIVCHGAPAPPTKQQQELSATKGLHEAASEKQSSVCKVEDSKKAIFHSQWKILNDVITKGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSRSDSLDQIPNNVAHATEGRMAPTCWRGRHRGKARKKRHKKRSKLKIQTVAAGRRGPRTPEQESCTPIPVQEDETHHSALYRNSFWLSELNKNWLYDPPPFQKPEKVLSAGKLNSVGSQHKTDLHKLISPVQCLNHVWKLHYQRDNVPQPETVRPFPYNILPPPFPHLDSPIHPMKLNALETYFHHDLNYPDSEHRLSGLNLGFSFPKCVSQSMKSSLDKVSVEEYLVDALKGSVSLGEPQNLASLAKTWRGGGLDLKEQLQKADENEGVLLTEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKVEDKQTGFQCAAKKVQVEHFRAEELTTCAVITSPKVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQVLEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVLGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKMGLQKEPVQRASASELRTKASTALQEVGGVTSPWKGEYREPRRLALHKESNPQTSLPPAVSPASAAPDPDPAARGCCASPAPPPAPERTQQREGTRCNPSRELPRIWDPPPLSSPPLPLKSCSHTERTTTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPSVSDASEKNSMKASLSLRDTMSSGIHSWSSQTDGQSFSWNNVLSRSRHTDTPSCFNGVKIQIRLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKDGHPVHYDMEVPDSGIELQCTLAPDCSVSWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(883047..883211,883726..883826,884327..884471,885152..885258,885475..885819,886393..886543,886887..887050,887680..887784,888160..888291,888905..889034,889521..889658,890060..890668,890784..890994,891333..891402,891880..892132))
location: region:883047-892132:-1
so has part: feature:891880-892132:-1:exon
so has part: feature:891333-891402:-1:exon
so has part: feature:890784-890994:-1:exon
so has part: feature:890060-890668:-1:exon
so has part: feature:889521-889658:-1:exon
so has part: feature:888905-889034:-1:exon
so has part: feature:888160-888291:-1:exon
so has part: feature:887680-887784:-1:exon
so has part: feature:886887-887050:-1:exon
so has part: feature:886393-886543:-1:exon
so has part: feature:885475-885819:-1:exon
so has part: feature:885152-885258:-1:exon
so has part: feature:884327-884471:-1:exon
so has part: feature:883726-883826:-1:exon
so has part: feature:883047-883211:-1:exon

XP_015740953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891880-892132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891333-891402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890784-890994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890060-890668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889521-889658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888905-889034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888160-888291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887680-887784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:886887-887050:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:886393-886543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885475-885819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885152-885258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884327-884471:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883726-883826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883047-883211:-1:exon

MYO1D
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902872..970043
location: region:902872-970043:1
so has part: feature:902872-970043:1:exon
subclass of: SO_0000010

107325005
type: Gene
SIO_000068: ncbigene

position:902872:1
position: 902872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970043:1
position: 970043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902872-970043:1:exon

MYO1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MYO1D
product: myosin ID, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015885442.2
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(902872..903112,918777..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,942076..942156,943249..943359)
location: region:902872-943359:1
so has part: feature:902872-903112:1:exon
so has part: feature:918777-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:942076-942156:1:exon
so has part: feature:943249-943359:1:exon

position:943359:1
position: 943359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902872-903112:1:exon

position:903112:1
position: 903112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918777-918985:1:exon

position:918777:1
position: 918777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918985:1
position: 918985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919633-919726:1:exon

position:919633:1
position: 919633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919726:1
position: 919726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:920441-920606:1:exon

position:920441:1
position: 920441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920606:1
position: 920606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:920819-920872:1:exon

position:920819:1
position: 920819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920872:1
position: 920872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:921493-921588:1:exon

position:921493:1
position: 921493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921588:1
position: 921588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:922274-922390:1:exon

position:922274:1
position: 922274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922390:1
position: 922390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:922717-922920:1:exon

position:922717:1
position: 922717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922920:1
position: 922920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:923314-923459:1:exon

position:923314:1
position: 923314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923459:1
position: 923459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:923545-923659:1:exon

position:923545:1
position: 923545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923659:1
position: 923659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:923937-924107:1:exon

position:923937:1
position: 923937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924107:1
position: 924107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:926946-927016:1:exon

position:926946:1
position: 926946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927016:1
position: 927016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:927889-927963:1:exon

position:927889:1
position: 927889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927963:1
position: 927963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:928821-928953:1:exon

position:928821:1
position: 928821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928953:1
position: 928953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:933247-933413:1:exon

position:933247:1
position: 933247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933413:1
position: 933413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:936275-936482:1:exon

position:936275:1
position: 936275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936482:1
position: 936482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:942076-942156:1:exon

position:942076:1
position: 942076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942156:1
position: 942156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:943249-943359:1:exon

position:943249:1
position: 943249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MYO1D
product: myosin ID, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_015885440.2
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(902873..903112,918777..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,943249..943472,944598..944742,945240..945344,949748..949861,952547..952701,968237..970043)
location: region:902873-970043:1
so has part: feature:902873-903112:1:exon
so has part: feature:918777-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:943249-943472:1:exon
so has part: feature:944598-944742:1:exon
so has part: feature:945240-945344:1:exon
so has part: feature:949748-949861:1:exon
so has part: feature:952547-952701:1:exon
so has part: feature:968237-970043:1:exon

position:902873:1
position: 902873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902873-903112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918777-918985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919633-919726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920441-920606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920819-920872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921493-921588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922274-922390:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922717-922920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923314-923459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:923545-923659:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923937-924107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:926946-927016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:927889-927963:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928821-928953:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:933247-933413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:936275-936482:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943249-943472:1:exon

position:943472:1
position: 943472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:944598-944742:1:exon

position:944598:1
position: 944598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944742:1
position: 944742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:945240-945344:1:exon

position:945240:1
position: 945240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945344:1
position: 945344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:949748-949861:1:exon

position:949748:1
position: 949748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949861:1
position: 949861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:952547-952701:1:exon

position:952547:1
position: 952547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952701:1
position: 952701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:968237-970043:1:exon

position:968237:1
position: 968237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MYO1D
product: myosin ID, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_015885441.2
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(903000..903112,914866..915020,918777..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,943249..943472,944598..944742,945240..945344,949748..949861,952547..952701,968237..970043)
location: region:903000-970043:1
so has part: feature:903000-903112:1:exon
so has part: feature:914866-915020:1:exon
so has part: feature:918777-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:943249-943472:1:exon
so has part: feature:944598-944742:1:exon
so has part: feature:945240-945344:1:exon
so has part: feature:949748-949861:1:exon
so has part: feature:952547-952701:1:exon
so has part: feature:968237-970043:1:exon

position:903000:1
position: 903000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903000-903112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914866-915020:1:exon

position:914866:1
position: 914866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915020:1
position: 915020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918777-918985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919633-919726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920441-920606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:920819-920872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921493-921588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922274-922390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922717-922920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:923314-923459:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923545-923659:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923937-924107:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:926946-927016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:927889-927963:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:928821-928953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:933247-933413:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:936275-936482:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:943249-943472:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:944598-944742:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:945240-945344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:949748-949861:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:952547-952701:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:968237-970043:1:exon

MYO1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Id isoform X1
translation: MAEQESLEFGKADFVLLDSVTMSEFMGNLRLRFEKGRIYTFIGEVVVSMNPYKNLNIYGRDMIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPGQRAEVERVKNILLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSDQMLRSLHLQKDASAYSYISPGAQLKCSINDGAEFKAVADAMKVIGFKQEEIQTVYKIVAAILHLGNLKFSVDGDTPLIENSKVVSIIADLLSTKSEMVEKALLFRTVATGRDVIDKQHTEQEATYGRDAFAKAIYERLFCWIVTHINDVIEVKNYDTTVHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQVIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCATDKTLEFDRDFRIKHYAGDVIYSVSGFIDKNKDTLFQDFKRLMYNSSNPVLKMMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQLFDEERCRHQVEYLGLLENVRVRRAGFAYRQTYQKFLHRYKMISEFTWPNHDLPSDKDAVKKLIECHGFQHDVAYGKTKIFIRTPRTLFTLEELHAKMLVRIVLFLQKVWRGTLARLRYKRTRAALTILRHYRRYKVKSYIHEVAQRFRNVRSMKDYGKHVQWPTPPKVLHRFEEALQAIYHRWRAGELIRSIPPKDLPQLRAKVAAMEVLKGHRADLGLQRAWEGDYIALRPDHPQSTAAFLPVATELKRKDKYMNVLFSCHVRKVNRFNKVEDRAIFITDRHLYKMDPMKQYKVMKTIPLYNLVGLSVSNGKDQLVVFHTKDNKDLIVCLSSKEPSNDSRVGELVGVLASHFKSEKRSLRVTVTHPVQCSLHGRKCSVSVETRIDQSQPDFTKHRSGFVLSVPGK
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(903018..903112,918777..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,943249..943472,944598..944742,945240..945344,949748..949861,952547..952701,968237..968393)
location: region:903018-968393:1
so has part: feature:903018-903112:1:exon
so has part: feature:918777-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:943249-943472:1:exon
so has part: feature:944598-944742:1:exon
so has part: feature:945240-945344:1:exon
so has part: feature:949748-949861:1:exon
so has part: feature:952547-952701:1:exon
so has part: feature:968237-968393:1:exon

XP_015740926.1
type: Protein
SIO_000068: ncbiprotein

position:903018:1
position: 903018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968393:1
position: 968393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903018-903112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918777-918985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919633-919726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920441-920606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920819-920872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921493-921588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922274-922390:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922717-922920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923314-923459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:923545-923659:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923937-924107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:926946-927016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:927889-927963:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928821-928953:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:933247-933413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:936275-936482:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943249-943472:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:944598-944742:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:945240-945344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:949748-949861:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:952547-952701:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:968237-968393:1:exon

MYO1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Id isoform X3
translation: MAEQESLEFGKADFVLLDSVTMSEFMGNLRLRFEKGRIYTFIGEVVVSMNPYKNLNIYGRDMIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPGQRAEVERVKNILLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSDQMLRSLHLQKDASAYSYISPGAQLKCSINDGAEFKAVADAMKVIGFKQEEIQTVYKIVAAILHLGNLKFSVDGDTPLIENSKVVSIIADLLSTKSEMVEKALLFRTVATGRDVIDKQHTEQEATYGRDAFAKAIYERLFCWIVTHINDVIEVKNYDTTVHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQVIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCATDKTLEFDRDFRIKHYAGDVIYSVSGFIDKNKDTLFQDFKRLMYNSSNPVLKMMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQLFDEERCRHQVEYLGLLENVRVRRAGFAYRQTYQKFLHRYKMISEFTWPNHDLPSDKDAVKKLIECHGFQHDVAYGKTKIFIRTPRTLFTLEELHAKMLVRIVLFLQKFGLLHVLLNG
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(903018..903112,918777..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,942076..942108)
location: region:903018-942108:1
so has part: feature:903018-903112:1:exon
so has part: feature:918777-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:942076-942108:1:exon

XP_015740928.1
type: Protein
SIO_000068: ncbiprotein

position:942108:1
position: 942108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903018-903112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918777-918985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919633-919726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920441-920606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920819-920872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921493-921588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922274-922390:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922717-922920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923314-923459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:923545-923659:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923937-924107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:926946-927016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:927889-927963:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928821-928953:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:933247-933413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:936275-936482:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:942076-942108:1:exon

MYO1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Id isoform X2
translation: MNPYKNLNIYGRDMIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPGQRAEVERVKNILLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSDQMLRSLHLQKDASAYSYISPGAQLKCSINDGAEFKAVADAMKVIGFKQEEIQTVYKIVAAILHLGNLKFSVDGDTPLIENSKVVSIIADLLSTKSEMVEKALLFRTVATGRDVIDKQHTEQEATYGRDAFAKAIYERLFCWIVTHINDVIEVKNYDTTVHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQVIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCATDKTLEFDRDFRIKHYAGDVIYSVSGFIDKNKDTLFQDFKRLMYNSSNPVLKMMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQLFDEERCRHQVEYLGLLENVRVRRAGFAYRQTYQKFLHRYKMISEFTWPNHDLPSDKDAVKKLIECHGFQHDVAYGKTKIFIRTPRTLFTLEELHAKMLVRIVLFLQKVWRGTLARLRYKRTRAALTILRHYRRYKVKSYIHEVAQRFRNVRSMKDYGKHVQWPTPPKVLHRFEEALQAIYHRWRAGELIRSIPPKDLPQLRAKVAAMEVLKGHRADLGLQRAWEGDYIALRPDHPQSTAAFLPVATELKRKDKYMNVLFSCHVRKVNRFNKVEDRAIFITDRHLYKMDPMKQYKVMKTIPLYNLVGLSVSNGKDQLVVFHTKDNKDLIVCLSSKEPSNDSRVGELVGVLASHFKSEKRSLRVTVTHPVQCSLHGRKCSVSVETRIDQSQPDFTKHRSGFVLSVPGK
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(918826..918985,919633..919726,920441..920606,920819..920872,921493..921588,922274..922390,922717..922920,923314..923459,923545..923659,923937..924107,926946..927016,927889..927963,928821..928953,933247..933413,936275..936482,943249..943472,944598..944742,945240..945344,949748..949861,952547..952701,968237..968393)
location: region:918826-968393:1
so has part: feature:918826-918985:1:exon
so has part: feature:919633-919726:1:exon
so has part: feature:920441-920606:1:exon
so has part: feature:920819-920872:1:exon
so has part: feature:921493-921588:1:exon
so has part: feature:922274-922390:1:exon
so has part: feature:922717-922920:1:exon
so has part: feature:923314-923459:1:exon
so has part: feature:923545-923659:1:exon
so has part: feature:923937-924107:1:exon
so has part: feature:926946-927016:1:exon
so has part: feature:927889-927963:1:exon
so has part: feature:928821-928953:1:exon
so has part: feature:933247-933413:1:exon
so has part: feature:936275-936482:1:exon
so has part: feature:943249-943472:1:exon
so has part: feature:944598-944742:1:exon
so has part: feature:945240-945344:1:exon
so has part: feature:949748-949861:1:exon
so has part: feature:952547-952701:1:exon
so has part: feature:968237-968393:1:exon

XP_015740927.1
type: Protein
SIO_000068: ncbiprotein

position:918826:1
position: 918826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918826-918985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919633-919726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:920441-920606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920819-920872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921493-921588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922274-922390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922717-922920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923314-923459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923545-923659:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:923937-924107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:926946-927016:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:927889-927963:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928821-928953:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:933247-933413:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:936275-936482:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:943249-943472:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:944598-944742:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:945240-945344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:949748-949861:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:952547-952701:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:968237-968393:1:exon

CDK5R1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CDK5R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970351..972183)
location: region:970351-972183:-1
so has part: feature:970351-972183:-1:exon
subclass of: SO_0000010

107325006
type: Gene
SIO_000068: ncbigene

position:970351:-1
position: 970351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972183:-1
position: 972183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970351-972183:-1:exon

CDK5R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CDK5R1
product: cyclin dependent kinase 5 regulatory subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885443.2
SIO_010081: CDK5R1
subclass of: SO_0000673
so part of: CDK5R1
location: complement(970351..972183)
location: region:970351-972183:-1
so has part: feature:970351-972183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970351-972183:-1:exon

CDK5R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CDK5R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 5 activator 1
translation: MGTVLSLSPSYRKAPLFEEGTGTVGHYTAVQNSKNAKEKGLKRHSLISVLPWKRIAAVSAKKKSSKKVQPNGGYQSNVTHLNNENLKKSLSCANLATFAPPPPSSSSSSSAAALPPPQKNPPGAPNAANAAAATATPRRVVVQASTSELLRCLGEFLCRRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISAEVGSDHELQAVLLTCLYLAYSYMGNEISYPLKPFLVESCKEAFWDRCLSIIDLMSPKMLQVNADPHFFTQVFADLKKESGAEEKGRLLIGLDR
SIO_010081: CDK5R1
subclass of: SO_0000673
so part of: CDK5R1
location: complement(971158..972075)
location: region:971158-972075:-1
so has part: feature:971158-972075:-1:exon

XP_015740929.1
type: Protein
SIO_000068: ncbiprotein

position:971158:-1
position: 971158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972075:-1
position: 972075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:971158-972075:-1:exon

PSMD11
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PSMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972698..979722)
location: region:972698-979722:-1
so has part: feature:972698-979722:-1:exon
subclass of: SO_0000010

107325034
type: Gene
SIO_000068: ncbigene

position:972698:-1
position: 972698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979722:-1
position: 979722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972698-979722:-1:exon

PSMD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PSMD11
product: proteasome 26S subunit, non-ATPase 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_015885511.2
SIO_010081: PSMD11
subclass of: SO_0000673
so part of: PSMD11
location: complement(join(972698..973204,973776..973827,973930..973965,974190..974315,974403..974465,974559..974619,974826..974970,975079..975273,975541..975598,975753..975824,976276..976400,976656..976757,979586..979722))
location: region:972698-979722:-1
so has part: feature:979586-979722:-1:exon
so has part: feature:976656-976757:-1:exon
so has part: feature:976276-976400:-1:exon
so has part: feature:975753-975824:-1:exon
so has part: feature:975541-975598:-1:exon
so has part: feature:975079-975273:-1:exon
so has part: feature:974826-974970:-1:exon
so has part: feature:974559-974619:-1:exon
so has part: feature:974403-974465:-1:exon
so has part: feature:974190-974315:-1:exon
so has part: feature:973930-973965:-1:exon
so has part: feature:973776-973827:-1:exon
so has part: feature:972698-973204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979586-979722:-1:exon

position:979586:-1
position: 979586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976656-976757:-1:exon

position:976656:-1
position: 976656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976757:-1
position: 976757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976276-976400:-1:exon

position:976276:-1
position: 976276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976400:-1
position: 976400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:975753-975824:-1:exon

position:975753:-1
position: 975753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975824:-1
position: 975824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975541-975598:-1:exon

position:975541:-1
position: 975541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975598:-1
position: 975598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975079-975273:-1:exon

position:975079:-1
position: 975079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975273:-1
position: 975273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:974826-974970:-1:exon

position:974826:-1
position: 974826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974970:-1
position: 974970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:974559-974619:-1:exon

position:974559:-1
position: 974559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974619:-1
position: 974619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:974403-974465:-1:exon

position:974403:-1
position: 974403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974465:-1
position: 974465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974190-974315:-1:exon

position:974190:-1
position: 974190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974315:-1
position: 974315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:973930-973965:-1:exon

position:973930:-1
position: 973930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973965:-1
position: 973965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:973776-973827:-1:exon

position:973776:-1
position: 973776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973827:-1
position: 973827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:972698-973204:-1:exon

position:973204:-1
position: 973204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PSMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 11
translation: MAAAAVLEFQRAQSLLSTDREASIGILHSIVKRDVQENDEEAVQVKEQSILELGSLLAKTGQAEELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVDLCLECIEWAKSEKRTFLRQALEARLVSLYFDTRRYQEALQLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDNPKAITALKYMLLCKIMLNAPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYKVELRDDPIINTHLAKLYDNLLEQNLIRVIEPFSRVQMEHISGLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT
SIO_010081: PSMD11
subclass of: SO_0000673
so part of: PSMD11
location: complement(join(973062..973204,973776..973827,973930..973965,974190..974315,974403..974465,974559..974619,974826..974970,975079..975273,975541..975598,975753..975824,976276..976400,976656..976757,979586..979676))
location: region:973062-979676:-1
so has part: feature:979586-979676:-1:exon
so has part: feature:976656-976757:-1:exon
so has part: feature:976276-976400:-1:exon
so has part: feature:975753-975824:-1:exon
so has part: feature:975541-975598:-1:exon
so has part: feature:975079-975273:-1:exon
so has part: feature:974826-974970:-1:exon
so has part: feature:974559-974619:-1:exon
so has part: feature:974403-974465:-1:exon
so has part: feature:974190-974315:-1:exon
so has part: feature:973930-973965:-1:exon
so has part: feature:973776-973827:-1:exon
so has part: feature:973062-973204:-1:exon

XP_015740997.1
type: Protein
SIO_000068: ncbiprotein

position:973062:-1
position: 973062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979676:-1
position: 979676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979586-979676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976656-976757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976276-976400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:975753-975824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975541-975598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975079-975273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974826-974970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974559-974619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974403-974465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974190-974315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:973930-973965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973776-973827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973062-973204:-1:exon

FZD2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FZD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(986035..988263)
location: region:986035-988263:-1
so has part: feature:986035-988263:-1:exon
subclass of: SO_0000010

107325035
type: Gene
SIO_000068: ncbigene

position:986035:-1
position: 986035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988263:-1
position: 988263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986035-988263:-1:exon

FZD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FZD2
product: frizzled class receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 47 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885512.1
SIO_010081: FZD2
subclass of: SO_0000673
so part of: FZD2
location: complement(986035..988263)
location: region:986035-988263:-1
so has part: feature:986035-988263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986035-988263:-1:exon

FZD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FZD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-2
translation: MRAPPGALPALAVLLAGLSAAPSRGQPHGEKGISVPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSLELKFFLCSMYAPVCTVLEQALPPCRSLCERARQGCEALMNKFGFQWPERLRCENFPRHGAEQICVGQNHSEDGGSSASLLTSIAPPAAHGTPGAPRYATPERPFHCPRALKVPGYLNYKFLGEKDCAAPCEPSRPDGHMFFNEDEIRFARVWILVWSVLCCASTFFTVTTYLVDMQRFSYPERPIIFLSGCYTMVSVAYIAGFVLQERVVCNERFQEDGYRTVVQGTKKEGCTILFMMLYFFGMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNGIDPLRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHGGTKTEKLERLMVRIGVFSVLYTVPATIVIACYFYEQAFRQHWERSWISQHCKSLAIPCPLHFTPRMTPDFTVYMIKYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSRQGETTV
SIO_010081: FZD2
subclass of: SO_0000673
so part of: FZD2
location: complement(986417..988093)
location: region:986417-988093:-1
so has part: feature:986417-988093:-1:exon

XP_015740998.1
type: Protein
SIO_000068: ncbiprotein

position:986417:-1
position: 986417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988093:-1
position: 988093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986417-988093:-1:exon

GPATCH8
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1004863..1028830
location: region:1004863-1028830:1
so has part: feature:1004863-1028830:1:exon
subclass of: SO_0000010

107325014
type: Gene
SIO_000068: ncbigene

position:1004863:1
position: 1004863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028830:1
position: 1028830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004863-1028830:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015885460.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1004863..1005041,1006128..1006162,1009070..1009087,1010073..1010145,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1004863-1028370:1
so has part: feature:1004863-1005041:1:exon
so has part: feature:1006128-1006162:1:exon
so has part: feature:1009070-1009087:1:exon
so has part: feature:1010073-1010145:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

position:1028370:1
position: 1028370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004863-1005041:1:exon

position:1005041:1
position: 1005041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006128-1006162:1:exon

position:1006128:1
position: 1006128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006162:1
position: 1006162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009070-1009087:1:exon

position:1009070:1
position: 1009070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009087:1
position: 1009087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010073-1010145:1:exon

position:1010073:1
position: 1010073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010145:1
position: 1010145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1015704-1015771:1:exon

position:1015704:1
position: 1015704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015771:1
position: 1015771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1015887-1015973:1:exon

position:1015887:1
position: 1015887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015973:1
position: 1015973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1017115-1017258:1:exon

position:1017115:1
position: 1017115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017258:1
position: 1017258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1023950-1024080:1:exon

position:1023950:1
position: 1023950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024080:1
position: 1024080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024704-1028370:1:exon

position:1024704:1
position: 1024704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_015885462.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1004863..1005041,1009070..1009087,1010073..1010145,1013181..1013225,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1004863-1028370:1
so has part: feature:1004863-1005041:1:exon
so has part: feature:1009070-1009087:1:exon
so has part: feature:1010073-1010145:1:exon
so has part: feature:1013181-1013225:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004863-1005041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009070-1009087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010073-1010145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013181-1013225:1:exon

position:1013181:1
position: 1013181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013225:1
position: 1013225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1015704-1015771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015885464.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1004863..1005041,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1004863-1028370:1
so has part: feature:1004863-1005041:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004863-1005041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015704-1015771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_015885461.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1004864..1005041,1009070..1009087,1010073..1010145,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028830)
location: region:1004864-1028830:1
so has part: feature:1004864-1005041:1:exon
so has part: feature:1009070-1009087:1:exon
so has part: feature:1010073-1010145:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028830:1:exon

position:1004864:1
position: 1004864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004864-1005041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009070-1009087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010073-1010145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015704-1015771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024704-1028830:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_015885465.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1004923..1005041,1010073..1010145,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1004923-1028370:1
so has part: feature:1004923-1005041:1:exon
so has part: feature:1010073-1010145:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

position:1004923:1
position: 1004923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004923-1005041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010073-1010145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015704-1015771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPATCH8
product: G-patch domain containing 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_015885463.2
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1005018..1005041,1010073..1010145,1013181..1013225,1015704..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1005018-1028370:1
so has part: feature:1005018-1005041:1:exon
so has part: feature:1010073-1010145:1:exon
so has part: feature:1013181-1013225:1:exon
so has part: feature:1015704-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

position:1005018:1
position: 1005018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005018-1005041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010073-1010145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1013181-1013225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015704-1015771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740946.1
type: Protein
SIO_000068: ncbiprotein

position:1015745:1
position: 1015745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEELRANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTPSWGAGGEMGTDRGFLNVGQVGGSTVPGQAPLQAAQAVSFGMKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKGEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNANEMRKGNSPKPKPSKHAEKAAESAAQPKEQSAPESSVQQGKAEQKEEIEDVSAQENKDLAESSLPEPGVPGDAAQPAPSCRDVPEGPRPPPGPFIPVLSKDESTTLQWPSELMIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKCKDTGGMCRENIQSAELGEGSKAKEPDSVTDGSGGAESRSMCQGRQEGSLQDRDEEEGEGDESGRSGSGRGKTGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRRTDMGEEKPRKRRRHRHKKVKSSLCSESGRALRAELPEDCGHGLKKQQRSSQDSQRKSLSAEEGSSSGRKDDSGASCPERGPKKRRAARRRCLQRRSRRSSADEEDSDEGSGGKRSRDSDDYGSGSERSRSRSASGRGHSSRRSYSSSSDASSERSRYSRRRSYSDSYSDYSQRSRCSKRSQDSEDDSDYNRSKRRKYSSSEDYSSSRSRSRSRSRRSRTRSRGRTRSSSCSRSRSKRRSRSMTGRSWKRSRSYSRGRSTRSHSQRSVSRKGSRGHDSPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKAEESRGSQNSSSGTSRTSEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVTDEVLPGAGKVGIKLKDPPQGYFGPKLPPSLGNKPMLPLIGKLPTVRKPNARRYEESAERGEELSDSDGAEDAVPGGQPLPGDPTVEEPKREEELPAVPMEAPALPECFGSGDLVLPHAFLAAPGDAEALEPMDGSGQPVPVEAAMMPLVPDVEHFPGYVPQGAEPGMEGERDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPASAALAPAAPALQPIHIPQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLAPISLSHLTHSIIPGHPATFLTSHPIHIIPASAIHPAPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(1015745..1015771,1015887..1015973,1017115..1017258,1023950..1024080,1024704..1028370)
location: region:1015745-1028370:1
so has part: feature:1015745-1015771:1:exon
so has part: feature:1015887-1015973:1:exon
so has part: feature:1017115-1017258:1:exon
so has part: feature:1023950-1024080:1:exon
so has part: feature:1024704-1028370:1:exon

XP_015740951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015745-1015771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015887-1015973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017115-1017258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023950-1024080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024704-1028370:1:exon

ITGA2B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ITGA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1029593..1049869
location: region:1029593-1049869:1
so has part: feature:1029593-1049869:1:exon
subclass of: SO_0000010

107325000
type: Gene
SIO_000068: ncbigene

position:1029593:1
position: 1029593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049869:1
position: 1049869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029593-1049869:1:exon

ITGA2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ITGA2B
product: integrin subunit alpha 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885436.2
SIO_010081: ITGA2B
subclass of: SO_0000673
so part of: ITGA2B
location: join(1029593..1029654,1030018..1030215,1030552..1030679,1031216..1031313,1038568..1038687,1038781..1038833,1039576..1039784,1041015..1041188,1041277..1041322,1041390..1041494,1042221..1042248,1045910..1046007,1046087..1046189,1046267..1046413,1046487..1046636,1046736..1046894,1049638..1049869)
location: region:1029593-1049869:1
so has part: feature:1029593-1029654:1:exon
so has part: feature:1030018-1030215:1:exon
so has part: feature:1030552-1030679:1:exon
so has part: feature:1031216-1031313:1:exon
so has part: feature:1038568-1038687:1:exon
so has part: feature:1038781-1038833:1:exon
so has part: feature:1039576-1039784:1:exon
so has part: feature:1041015-1041188:1:exon
so has part: feature:1041277-1041322:1:exon
so has part: feature:1041390-1041494:1:exon
so has part: feature:1042221-1042248:1:exon
so has part: feature:1045910-1046007:1:exon
so has part: feature:1046087-1046189:1:exon
so has part: feature:1046267-1046413:1:exon
so has part: feature:1046487-1046636:1:exon
so has part: feature:1046736-1046894:1:exon
so has part: feature:1049638-1049869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029593-1029654:1:exon

position:1029654:1
position: 1029654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1030018-1030215:1:exon

position:1030018:1
position: 1030018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030215:1
position: 1030215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030552-1030679:1:exon

position:1030552:1
position: 1030552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030679:1
position: 1030679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1031216-1031313:1:exon

position:1031216:1
position: 1031216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031313:1
position: 1031313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1038568-1038687:1:exon

position:1038568:1
position: 1038568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038687:1
position: 1038687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1038781-1038833:1:exon

position:1038781:1
position: 1038781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038833:1
position: 1038833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1039576-1039784:1:exon

position:1039576:1
position: 1039576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039784:1
position: 1039784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1041015-1041188:1:exon

position:1041015:1
position: 1041015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041188:1
position: 1041188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1041277-1041322:1:exon

position:1041277:1
position: 1041277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041322:1
position: 1041322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1041390-1041494:1:exon

position:1041390:1
position: 1041390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041494:1
position: 1041494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1042221-1042248:1:exon

position:1042221:1
position: 1042221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042248:1
position: 1042248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1045910-1046007:1:exon

position:1045910:1
position: 1045910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046007:1
position: 1046007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1046087-1046189:1:exon

position:1046087:1
position: 1046087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046189:1
position: 1046189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1046267-1046413:1:exon

position:1046267:1
position: 1046267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046413:1
position: 1046413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1046487-1046636:1:exon

position:1046487:1
position: 1046487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046636:1
position: 1046636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1046736-1046894:1:exon

position:1046736:1
position: 1046736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046894:1
position: 1046894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1049638-1049869:1:exon

position:1049638:1
position: 1049638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGA2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ITGA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-IIb
translation: MELLVKEKLLWGAGKGERGGNGLGASGQRCGSRCLYELFFLGTYFFLGANASGPPDLNLLHPQPTPTTAERELLRYSPWDFHEEGGRVSVAVGAPRANTSQPVREPGAVFLCRYPPGHGACRVMEFDSDGDQQELHPGLELRLHKAGQWMGAALLSRAGTLLILGIMGVIWGWCGTDAAMGQVEIFSAGLSLRRLHGIPGEQVASYFGHTVAVTDINGDGRDDVLVGAPLFVERRSAGKQREVGRLYVYMGGSGRWWQRPLQVVTGTEPYGRFAAAIAPMGDLDGDGCGDVAVGVPFGGSGSVLIFLGRGSGLTPIPSQRLLSPFPGPAAFGFSLRAGSDIDGNGHPDLLVGAYGVSKLAVYRTRPVVMVRAQLNVPTAMDPQVTECSLNGTHSRVTWDSTMGTRYGTHSLLIPRSQNSRPITVAVSVPVEAHAELELRGMSLPATALLPTEWSQDGDDNQTEHRGVRVEHVYQLHNKGPGTVTNVTMNIRVPVVVGGRVWIHVVEIGTEGGIECGTNPEPDNEEGTQPEPEPEPEPEPEPEPEPEPEPEPEPHDVGRHNGTQRWDEEGSVSVHCGNTSCVAVRCHAGIMAQGQRVLVAVHVLLRMDPERQVTAPRGHGDTMGSPPGMGAVGSPRPLLQVGFFKRTRPPAEGEIGEGAAGQGQSPEQGGEQG
SIO_010081: ITGA2B
subclass of: SO_0000673
so part of: ITGA2B
location: join(1029593..1029654,1030018..1030215,1030552..1030679,1031216..1031313,1038568..1038687,1038781..1038833,1039576..1039784,1041015..1041188,1041277..1041322,1041390..1041494,1042221..1042248,1045910..1046007,1046087..1046189,1046267..1046413,1046487..1046636,1046736..1046894,1049638..1049778)
location: region:1029593-1049778:1
so has part: feature:1029593-1029654:1:exon
so has part: feature:1030018-1030215:1:exon
so has part: feature:1030552-1030679:1:exon
so has part: feature:1031216-1031313:1:exon
so has part: feature:1038568-1038687:1:exon
so has part: feature:1038781-1038833:1:exon
so has part: feature:1039576-1039784:1:exon
so has part: feature:1041015-1041188:1:exon
so has part: feature:1041277-1041322:1:exon
so has part: feature:1041390-1041494:1:exon
so has part: feature:1042221-1042248:1:exon
so has part: feature:1045910-1046007:1:exon
so has part: feature:1046087-1046189:1:exon
so has part: feature:1046267-1046413:1:exon
so has part: feature:1046487-1046636:1:exon
so has part: feature:1046736-1046894:1:exon
so has part: feature:1049638-1049778:1:exon

XP_015740922.2
type: Protein
SIO_000068: ncbiprotein

position:1049778:1
position: 1049778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029593-1029654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030018-1030215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030552-1030679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031216-1031313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038568-1038687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038781-1038833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1039576-1039784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041015-1041188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041277-1041322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041390-1041494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042221-1042248:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045910-1046007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1046087-1046189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1046267-1046413:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1046487-1046636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1046736-1046894:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1049638-1049778:1:exon

LOC107324992
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1055153..1064632
location: region:1055153-1064632:1
so has part: feature:1055153-1064632:1:exon
subclass of: SO_0000010

107324992
type: Gene
SIO_000068: ncbigene

position:1055153:1
position: 1055153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064632:1
position: 1064632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055153-1064632:1:exon

LOC107324992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324992
product: protein FAM171A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449351.1
SIO_010081: LOC107324992
subclass of: SO_0000673
so part of: LOC107324992
location: join(1055153..1056171,1057569..1057709,1057867..1058094,1059491..1059583,1061046..1061181,1063383..1063806,1063855..1064632)
location: region:1055153-1064632:1
so has part: feature:1055153-1056171:1:exon
so has part: feature:1057569-1057709:1:exon
so has part: feature:1057867-1058094:1:exon
so has part: feature:1059491-1059583:1:exon
so has part: feature:1061046-1061181:1:exon
so has part: feature:1063383-1063806:1:exon
so has part: feature:1063855-1064632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055153-1056171:1:exon

position:1056171:1
position: 1056171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057569-1057709:1:exon

position:1057569:1
position: 1057569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057709:1
position: 1057709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057867-1058094:1:exon

position:1057867:1
position: 1057867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058094:1
position: 1058094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1059491-1059583:1:exon

position:1059491:1
position: 1059491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059583:1
position: 1059583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061046-1061181:1:exon

position:1061046:1
position: 1061046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061181:1
position: 1061181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1063383-1063806:1:exon

position:1063383:1
position: 1063383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063806:1
position: 1063806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1063855-1064632:1:exon

position:1063855:1
position: 1063855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A2-like
translation: MALQGRSPPPSCTPLHCMGWSPQPHSVVTLQGCVPPQPPPVPTDVLLKVHVYEGGSLTPLPQTSLEVLGPRGSLASGSTDPDGSGVLPLSYSLGTWVLVTATRRGFVTATVPWRVTKLPLYASISLYLQPERPATLILYEDLVQILLGPPGEWGPKGPTGTCGVSSXVLLKVHVYEGGSLTPLPQTSLEVLGPRGSLASGSTDPDGSGVLPLSYSLGTWVLVTATRRGFVTATVPWRVTKLPLYASISLYLQPERPATLILYEDLVQILLGPPGPAALLPVAAGMKDITAYHTIFLLTILGALALLVLTLLCLLIYYCRRRCLKPRQQHRKLPLSGTLDASKRDQATSMSQLNLICSHMETASSGGDTAAHSPVLKFDGSREDFFAPVPSSAPPSSSNAAPRRCHQREDFTPNEGPPAAPHGAEVPPSDPLPPPPPPPPRPPSLGAPMGPTMGPSMGPSMGPSMGPSMGPPGPLILCGALEGPQEDSVYRGVVPTLLIPARYMRLDGAAEGSPQLEAPNAAAAGGAPQAGPPPQGGGGGPVAIPVLLNESAVAQLNGELQALAEQKLVAPRAWFVSLDGRASHVRHSYIDLQGGERGPPPPRARPPPPRGPPSPEDSALAPLLGGPPVGRRGAGGGGSGCSSASEPPRDSPSSPEDEVGDGGEGGDDGGDRKSPWQRREERPLMVFNVK
SIO_010081: LOC107324992
subclass of: SO_0000673
so part of: LOC107324992
location: join(1055814..1056171,1057569..1057709,1057867..1058094,1059491..1059583,1061046..1061181,1063383..1063806,1063855..1064544)
location: region:1055814-1064544:1
so has part: feature:1055814-1056171:1:exon
so has part: feature:1057569-1057709:1:exon
so has part: feature:1057867-1058094:1:exon
so has part: feature:1059491-1059583:1:exon
so has part: feature:1061046-1061181:1:exon
so has part: feature:1063383-1063806:1:exon
so has part: feature:1063855-1064544:1:exon

XP_032305242.1
type: Protein
SIO_000068: ncbiprotein

position:1055814:1
position: 1055814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064544:1
position: 1064544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055814-1056171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057569-1057709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057867-1058094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059491-1059583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061046-1061181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063383-1063806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063855-1064544:1:exon

LOC107325037
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057716..1060449
location: region:1057716-1060449:1
so has part: feature:1057716-1060449:1:exon
subclass of: SO_0000010

107325037
type: Gene
SIO_000068: ncbigene

position:1057716:1
position: 1057716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060449:1
position: 1060449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057716-1060449:1:exon

LOC107325037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325037
product: protein FAM171A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_015885519.2
SIO_010081: LOC107325037
subclass of: SO_0000673
so part of: LOC107325037
location: join(1057716..1058094,1059491..1060449)
location: region:1057716-1060449:1
so has part: feature:1057716-1058094:1:exon
so has part: feature:1059491-1060449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057716-1058094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059491-1060449:1:exon

LOC107325037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A2-like
translation: MALQGRSPPPSCTPLHCMGWSPQPHSVVTLQGCVPPQPPPVPTDVLLKVHVYEGGSLTPLPQTSLEVLGPRGSLASGSTDPDGSGVLPLSYSLGTWVLVTATRRGFVTATVPWRVTKLPLYASISLYLQPERPATLILYEDLVQILLGPPGEWGPKGPTGTCGVSSLL
SIO_010081: LOC107325037
subclass of: SO_0000673
so part of: LOC107325037
location: join(1057737..1058094,1059491..1059639)
location: region:1057737-1059639:1
so has part: feature:1057737-1058094:1:exon
so has part: feature:1059491-1059639:1:exon

XP_015741005.1
type: Protein
SIO_000068: ncbiprotein

position:1057737:1
position: 1057737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059639:1
position: 1059639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057737-1058094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059491-1059639:1:exon

GRN
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1065748..1067767)
location: region:1065748-1067767:-1
so has part: feature:1065748-1067767:-1:exon
subclass of: SO_0000010

107324993
type: Gene
SIO_000068: ncbigene

position:1065748:-1
position: 1065748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067767:-1
position: 1067767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065748-1067767:-1:exon

GRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GRN
product: granulin precursor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015885430.1
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: complement(join(1065748..1065777,1066343..1066480,1067226..1067510,1067604..1067767))
location: region:1065748-1067767:-1
so has part: feature:1067604-1067767:-1:exon
so has part: feature:1067226-1067510:-1:exon
so has part: feature:1066343-1066480:-1:exon
so has part: feature:1065748-1065777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1067604-1067767:-1:exon

position:1067604:-1
position: 1067604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067226-1067510:-1:exon

position:1067226:-1
position: 1067226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067510:-1
position: 1067510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066343-1066480:-1:exon

position:1066343:-1
position: 1066343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066480:-1
position: 1066480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065748-1065777:-1:exon

position:1065777:-1
position: 1065777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: progranulin
translation: MSPMSPWGDTAPHPTALHRVPCPDNSSSCPDGATCCRLPSGPYGCCPLQNAVCCSDGLHCCPQGTTCDLQSSTCTSGGDRTHGVGTPGAPRPQMGMDAMKGTSAAAVKVSASVGDVKCDDEMSCPDGDTCCRLSTGQWGCCPLEQAVCWPDHSTACPRATFCDRPRGDVACRGGFRQPWLEKSPAMGAGGGERAARTTQH
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: complement(join(1065748..1065777,1066343..1066480,1067226..1067510,1067604..1067753))
location: region:1065748-1067753:-1
so has part: feature:1067604-1067753:-1:exon
so has part: feature:1067226-1067510:-1:exon
so has part: feature:1066343-1066480:-1:exon
so has part: feature:1065748-1065777:-1:exon

XP_015740916.1
type: Protein
SIO_000068: ncbiprotein

position:1067753:-1
position: 1067753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067604-1067753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067226-1067510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066343-1066480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065748-1065777:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 93934
estimated length: 100
gap type: between scaffolds
so part of: sequence
location: 1068216..1068315
location: region:1068216-1068315:1
so has part: feature:1068216-1068315:1:region

position:1068216:1
position: 1068216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068315:1
position: 1068315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068216-1068315:1:region

LOC107325041
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1068964..1075796)
location: region:1068964-1075796:-1
so has part: feature:1068964-1075796:-1:exon
subclass of: SO_0000010

107325041
type: Gene
SIO_000068: ncbigene

position:1068964:-1
position: 1068964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075796:-1
position: 1075796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068964-1075796:-1:exon

LOC107325041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325041
product: probable ATP-dependent RNA helicase DHX34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015885523.2
SIO_010081: LOC107325041
subclass of: SO_0000673
so part of: LOC107325041
location: complement(join(1068964..1069257,1074987..1075796))
location: region:1068964-1075796:-1
so has part: feature:1074987-1075796:-1:exon
so has part: feature:1068964-1069257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074987-1075796:-1:exon

position:1074987:-1
position: 1074987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068964-1069257:-1:exon

position:1069257:-1
position: 1069257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DHX34
translation: MAIVEPETLQGDPIHGDPIQSTNRAQSQPQTPYSDQSIPYGDQSKPHKTQALYDDQSRPYNPQTPYSDQSKPHRPQTLQDDPIQTQYGDISRPYKPQTPYRDPYIPHNLYDDLYIPYKHHIELHSALLHYITFTQQRSFNKLTQIHRDRSNLPIAPYRAAILDALDQNRVVLVSGDPGCGKSTQVPQFLLEGGYKHVACTQPRRIACIALANRVAYESLQQYGQQVIYNPIPKEESEFTPTKWDRLDPRPYLRVLESIDRRFPQEECGDLLVFLSGVPEIGVVMEAVRGYVETSGRWVLLPLHSALPVAEQDKVIMGGYRAG
SIO_010081: LOC107325041
subclass of: SO_0000673
so part of: LOC107325041
location: complement(join(1068964..1069257,1074987..1075661))
location: region:1068964-1075661:-1
so has part: feature:1074987-1075661:-1:exon
so has part: feature:1068964-1069257:-1:exon

XP_015741009.2
type: Protein
SIO_000068: ncbiprotein

position:1075661:-1
position: 1075661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074987-1075661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068964-1069257:-1:exon

OPA3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1078402..1087559
location: region:1078402-1087559:1
so has part: feature:1078402-1087559:1:exon
subclass of: SO_0000010

107325056
type: Gene
SIO_000068: ncbigene

position:1078402:1
position: 1078402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087559:1
position: 1087559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078402-1087559:1:exon

OPA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: OPA3
product: outer mitochondrial membrane lipid metabolism regulator OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 170 samples with support for all annotated introns
transcript id: XM_015885550.2
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(1078402..1078593,1087101..1087559)
location: region:1078402-1087559:1
so has part: feature:1078402-1078593:1:exon
so has part: feature:1087101-1087559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078402-1078593:1:exon

position:1078593:1
position: 1078593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087101-1087559:1:exon