Coturnix japonica isolate 7356 chromosome 24, Coturnix japonica 2.1, whole genome shotgun sequence.
type: Entry
definition: Coturnix japonica isolate 7356 chromosome 24, Coturnix japonica 2.1, whole genome shotgun sequence.
sequence version: NC_029539.1
sequence date: 2020-02-18
sequence: sequence
division: CON
label: NC_029539.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA314147
dblink: SAMN03989050
keyword: WGS
keyword: RefSeq
source: Coturnix japonica (Japanese quail)
organism: Coturnix japonica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003804.1.\nAssembly name: Coturnix japonica 2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The International Quail Genome\nConsortium on 2016/03/01. The original whole-genome shotgun project\nhas the accession LSZS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: McDonnell Genome Institute - Washington\n University School of Medicine\nAssembly Method :: ALLPATHS-LG v. 4.7.0\nAssembly Name :: Coturnix japonica 2.1\nGenome Coverage :: 73X\nSequencing Technology :: Illumina GA IIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Coturnix japonica Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5496777
topology: linear
so has quality: SO_0000987
location: 1..5496777
location: region:1-5496777:1
RO_0002162: 93934

NC_029539
type: RefSeq
SIO_000068: refseq

PRJNA314147
type: BioProject
SIO_000068: bioproject

SAMN03989050
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5496777:1
position: 5496777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5496777:1:source
so part of: sequence
organism: Coturnix japonica
mol type: genomic DNA
isolate: 7356
chromosome: 24
sex: male
tissue type: blood
country: France: Tours, INRA PEAT

93934
type: Taxonomy
SIO_000068: taxonomy

LOC116654369
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3476..5042)
location: region:3476-5042:-1
so has part: feature:3476-5042:-1:exon
subclass of: SO_0000011

116654369
type: Gene
SIO_000068: ncbigene

position:3476:-1
position: 3476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042:-1
position: 5042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3476-5042:-1:exon

LOC116654369
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654369
product: uncharacterized LOC116654369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004309566.1
SIO_010081: LOC116654369
subclass of: SO_0000673
so part of: LOC116654369
location: complement(join(3476..3917,4116..4193,4278..5042))
location: region:3476-5042:-1
so has part: feature:4278-5042:-1:exon
so has part: feature:4116-4193:-1:exon
so has part: feature:3476-3917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4278-5042:-1:exon

position:4278:-1
position: 4278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4116-4193:-1:exon

position:4116:-1
position: 4116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193:-1
position: 4193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3476-3917:-1:exon

position:3917:-1
position: 3917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7218..20205)
location: region:7218-20205:-1
so has part: feature:7218-20205:-1:exon
subclass of: SO_0000010

107324109
type: Gene
SIO_000068: ncbigene

position:7218:-1
position: 7218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20205:-1
position: 20205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7218-20205:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: C2CD2L
product: C2CD2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_015883802.2
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(7218..12476,12801..13083,13567..13700,13922..14023,14696..14867,15162..15289,15849..15913,16469..16592,16744..16861,18254..18364,18715..18834,19295..19390,19792..20205))
location: region:7218-20205:-1
so has part: feature:19792-20205:-1:exon
so has part: feature:19295-19390:-1:exon
so has part: feature:18715-18834:-1:exon
so has part: feature:18254-18364:-1:exon
so has part: feature:16744-16861:-1:exon
so has part: feature:16469-16592:-1:exon
so has part: feature:15849-15913:-1:exon
so has part: feature:15162-15289:-1:exon
so has part: feature:14696-14867:-1:exon
so has part: feature:13922-14023:-1:exon
so has part: feature:13567-13700:-1:exon
so has part: feature:12801-13083:-1:exon
so has part: feature:7218-12476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19792-20205:-1:exon

position:19792:-1
position: 19792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19295-19390:-1:exon

position:19295:-1
position: 19295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19390:-1
position: 19390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18715-18834:-1:exon

position:18715:-1
position: 18715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18834:-1
position: 18834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18254-18364:-1:exon

position:18254:-1
position: 18254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18364:-1
position: 18364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16744-16861:-1:exon

position:16744:-1
position: 16744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16861:-1
position: 16861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16469-16592:-1:exon

position:16469:-1
position: 16469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16592:-1
position: 16592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15849-15913:-1:exon

position:15849:-1
position: 15849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15913:-1
position: 15913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15162-15289:-1:exon

position:15162:-1
position: 15162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15289:-1
position: 15289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14696-14867:-1:exon

position:14696:-1
position: 14696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14867:-1
position: 14867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13922-14023:-1:exon

position:13922:-1
position: 13922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14023:-1
position: 14023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13567-13700:-1:exon

position:13567:-1
position: 13567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13700:-1
position: 13700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12801-13083:-1:exon

position:12801:-1
position: 12801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13083:-1
position: 13083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7218-12476:-1:exon

position:12476:-1
position: 12476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: C2CD2L
product: C2CD2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_015883801.2
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(7218..12476,12801..13083,13567..13700,13922..14023,14696..14867,15162..15289,15849..15913,16469..16592,16744..16861,17308..17421,18254..18364,18715..18834,19295..19390,19792..20202))
location: region:7218-20202:-1
so has part: feature:19792-20202:-1:exon
so has part: feature:19295-19390:-1:exon
so has part: feature:18715-18834:-1:exon
so has part: feature:18254-18364:-1:exon
so has part: feature:17308-17421:-1:exon
so has part: feature:16744-16861:-1:exon
so has part: feature:16469-16592:-1:exon
so has part: feature:15849-15913:-1:exon
so has part: feature:15162-15289:-1:exon
so has part: feature:14696-14867:-1:exon
so has part: feature:13922-14023:-1:exon
so has part: feature:13567-13700:-1:exon
so has part: feature:12801-13083:-1:exon
so has part: feature:7218-12476:-1:exon

position:20202:-1
position: 20202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19792-20202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19295-19390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18715-18834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18254-18364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17308-17421:-1:exon

position:17308:-1
position: 17308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17421:-1
position: 17421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16744-16861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16469-16592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15849-15913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15162-15289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14696-14867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13922-14023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13567-13700:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12801-13083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7218-12476:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X2
translation: MGPDPGWAVLVLLFAASLLTVAAWLLQYWRSAALRSSRRRVPVTEEAGARALLAALLSLRSLREQWQRAWVRALNGQARRHGSSVQITFEEGPQLPPAANISGVTCKGQSGHSMVLCCHLSAEAVKFPVSVTQQSAVAVSVDTYHVTLALLQAEVEIHLEEIQNQGLLVSWTFKDRPDLDLTVLPRLQPYEVSSSKVTQESPCSAVEAPLGPKLLLRNLRVLNLCSQRNGGVGEICCVAELDSPPQQKRTRPVRADSAGTAAEMEWNEELLLELGPRSKELKLQVLGNSGKGEGVLLAHTTLLLDSLGKQPSGRQVCSLASGAGQPLAAEATIVLELLYQDSSASLNAQHATSLHTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKVDCKLDSPSRSPSKVEVTEKKTTLLLESSCPHNTMPSSSRDSQMMPNGLDPVAETAIRQLTETNKSAKKTPTKRSTLIISGVSKVPLAQDEMALSLGYAASMEATGYGDTVAVCASDQVHDSTESSQLLEASPSEQRASQELDETTRSDISERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRKSKQKEAGLSQSHDDLSNVITSSATKKKAGSFSHRLIKRFSFKSKSKPKTSDNTTTGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(12256..12476,12801..13083,13567..13700,13922..14023,14696..14867,15162..15289,15849..15913,16469..16592,16744..16861,18254..18364,18715..18834,19295..19390,19792..20037))
location: region:12256-20037:-1
so has part: feature:19792-20037:-1:exon
so has part: feature:19295-19390:-1:exon
so has part: feature:18715-18834:-1:exon
so has part: feature:18254-18364:-1:exon
so has part: feature:16744-16861:-1:exon
so has part: feature:16469-16592:-1:exon
so has part: feature:15849-15913:-1:exon
so has part: feature:15162-15289:-1:exon
so has part: feature:14696-14867:-1:exon
so has part: feature:13922-14023:-1:exon
so has part: feature:13567-13700:-1:exon
so has part: feature:12801-13083:-1:exon
so has part: feature:12256-12476:-1:exon

XP_015739288.1
type: Protein
SIO_000068: ncbiprotein

position:12256:-1
position: 12256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20037:-1
position: 20037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19792-20037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19295-19390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18715-18834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18254-18364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16744-16861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16469-16592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15849-15913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15162-15289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14696-14867:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13922-14023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13567-13700:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12801-13083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12256-12476:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X1
translation: MGPDPGWAVLVLLFAASLLTVAAWLLQYWRSAALRSSRRRVPVTEEAGARALLAALLSLRSLREQWQRAWVRALNGQARRHGSSVQITFEEGPQLPPAANISGVTCKGQSGHSMVLCCHLSAEAVKFPVSVTQQSAVAVSVDTYHVTLALLQAEVEIHLEEIQNQGLLVSWTFKDRPDLDLTVLPRLQPYENEGKADLSTIKDLIEDTIVSTQPAMMVNLKACTAATGAVSSSKVTQESPCSAVEAPLGPKLLLRNLRVLNLCSQRNGGVGEICCVAELDSPPQQKRTRPVRADSAGTAAEMEWNEELLLELGPRSKELKLQVLGNSGKGEGVLLAHTTLLLDSLGKQPSGRQVCSLASGAGQPLAAEATIVLELLYQDSSASLNAQHATSLHTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKVDCKLDSPSRSPSKVEVTEKKTTLLLESSCPHNTMPSSSRDSQMMPNGLDPVAETAIRQLTETNKSAKKTPTKRSTLIISGVSKVPLAQDEMALSLGYAASMEATGYGDTVAVCASDQVHDSTESSQLLEASPSEQRASQELDETTRSDISERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRKSKQKEAGLSQSHDDLSNVITSSATKKKAGSFSHRLIKRFSFKSKSKPKTSDNTTTGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(12256..12476,12801..13083,13567..13700,13922..14023,14696..14867,15162..15289,15849..15913,16469..16592,16744..16861,17308..17421,18254..18364,18715..18834,19295..19390,19792..20037))
location: region:12256-20037:-1
so has part: feature:19792-20037:-1:exon
so has part: feature:19295-19390:-1:exon
so has part: feature:18715-18834:-1:exon
so has part: feature:18254-18364:-1:exon
so has part: feature:17308-17421:-1:exon
so has part: feature:16744-16861:-1:exon
so has part: feature:16469-16592:-1:exon
so has part: feature:15849-15913:-1:exon
so has part: feature:15162-15289:-1:exon
so has part: feature:14696-14867:-1:exon
so has part: feature:13922-14023:-1:exon
so has part: feature:13567-13700:-1:exon
so has part: feature:12801-13083:-1:exon
so has part: feature:12256-12476:-1:exon

XP_015739287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19792-20037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19295-19390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18715-18834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18254-18364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17308-17421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16744-16861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16469-16592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15849-15913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15162-15289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14696-14867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13922-14023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13567-13700:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12801-13083:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12256-12476:-1:exon

DPAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19873..25633
location: region:19873-25633:1
so has part: feature:19873-25633:1:exon
subclass of: SO_0000010

107324112
type: Gene
SIO_000068: ncbigene

position:19873:1
position: 19873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25633:1
position: 25633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19873-25633:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032449068.1
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(19873..19978,20723..21074,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25633)
location: region:19873-25633:1
so has part: feature:19873-19978:1:exon
so has part: feature:20723-21074:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19873-19978:1:exon

position:19978:1
position: 19978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20723-21074:1:exon

position:20723:1
position: 20723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21074:1
position: 21074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21348-21561:1:exon

position:21348:1
position: 21348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21561:1
position: 21561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22124-22270:1:exon

position:22124:1
position: 22124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22270:1
position: 22270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22410-22494:1:exon

position:22410:1
position: 22410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22494:1
position: 22494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22751-22939:1:exon

position:22751:1
position: 22751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22939:1
position: 22939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23594-23681:1:exon

position:23594:1
position: 23594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23681:1
position: 23681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24036-24191:1:exon

position:24036:1
position: 24036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24191:1
position: 24191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25095-25633:1:exon

position:25095:1
position: 25095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032449067.1
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(20667..21074,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25633)
location: region:20667-25633:1
so has part: feature:20667-21074:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25633:1:exon

position:20667:1
position: 20667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20667-21074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21348-21561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22124-22270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22410-22494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22751-22939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23594-23681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24036-24191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25095-25633:1:exon

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X1
translation: MKAQTNADLFLYFRVRGGRRKRRVTAEREERRLPGPKMAPPSRTERKRRARIRSVPLQHPAARTRPEPLRARRGSAQRGHGGVSRRAAPHQRRGVAAGFRGHAHADPGLQRAFLGGAPLRRGPEQSLPAAHFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRAFLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIVFNLVELNGDYQDDHIFSLYIMIPFFFTTLGLFYHNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHIIPCPRHRLPRLNATTGKLEMSYSKFKTKSLSTLGTYILKVVKILHIVDVRSGMDEDGEYSECNNMTLINFVIKLIGPIHERNLTLLLLLIQVLGSMIAFSVRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(20682..21074,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25160)
location: region:20682-25160:1
so has part: feature:20682-21074:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25160:1:exon

XP_032304958.1
type: Protein
SIO_000068: ncbiprotein

position:20682:1
position: 20682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25160:1
position: 25160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20682-21074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21348-21561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22124-22270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22410-22494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22751-22939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23594-23681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24036-24191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25095-25160:1:exon

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X2
translation: MAPPSRTERKRRARIRSVPLQHPAARTRPEPLRARRGSAQRGHGGVSRRAAPHQRRGVAAGFRGHAHADPGLQRAFLGGAPLRRGPEQSLPAAHFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRAFLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIVFNLVELNGDYQDDHIFSLYIMIPFFFTTLGLFYHNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHIIPCPRHRLPRLNATTGKLEMSYSKFKTKSLSTLGTYILKVVKILHIVDVRSGMDEDGEYSECNNMTLINFVIKLIGPIHERNLTLLLLLIQVLGSMIAFSVRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(20793..21074,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25160)
location: region:20793-25160:1
so has part: feature:20793-21074:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25160:1:exon

XP_032304959.1
type: Protein
SIO_000068: ncbiprotein

position:20793:1
position: 20793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20793-21074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21348-21561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22124-22270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22410-22494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22751-22939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23594-23681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24036-24191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25095-25160:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 170 samples with support for all annotated introns
transcript id: XM_015883807.2
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(20807..21074,21150..21270,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25631)
location: region:20807-25631:1
so has part: feature:20807-21074:1:exon
so has part: feature:21150-21270:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25631:1:exon

position:20807:1
position: 20807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25631:1
position: 25631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20807-21074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21150-21270:1:exon

position:21150:1
position: 21150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21270:1
position: 21270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21348-21561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22124-22270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22410-22494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22751-22939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23594-23681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24036-24191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25095-25631:1:exon

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X3
translation: MAACPAAPLLINVGGSLLGFVATLTLIPAFKEHFLAARLFGEDLNKVSRRPIPEAQGMISGAVFLIILFCFIPVPFLRCFVEEQCAAFPHDEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRAFLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIVFNLVELNGDYQDDHIFSLYIMIPFFFTTLGLFYHNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHIIPCPRHRLPRLNATTGKLEMSYSKFKTKSLSTLGTYILKVVKILHIVDVRSGMDEDGEYSECNNMTLINFVIKLIGPIHERNLTLLLLLIQVLGSMIAFSVRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(20920..21074,21150..21270,21348..21561,22124..22270,22410..22494,22751..22939,23594..23681,24036..24191,25095..25160)
location: region:20920-25160:1
so has part: feature:20920-21074:1:exon
so has part: feature:21150-21270:1:exon
so has part: feature:21348-21561:1:exon
so has part: feature:22124-22270:1:exon
so has part: feature:22410-22494:1:exon
so has part: feature:22751-22939:1:exon
so has part: feature:23594-23681:1:exon
so has part: feature:24036-24191:1:exon
so has part: feature:25095-25160:1:exon

XP_015739293.1
type: Protein
SIO_000068: ncbiprotein

position:20920:1
position: 20920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20920-21074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21150-21270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21348-21561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22124-22270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22410-22494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22751-22939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23594-23681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24036-24191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25095-25160:1:exon

LOC107324115
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25747..26752
location: region:25747-26752:1
so has part: feature:25747-26752:1:exon
subclass of: SO_0000010

107324115
type: Gene
SIO_000068: ncbigene

position:25747:1
position: 25747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26752:1
position: 26752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25747-26752:1:exon

LOC107324115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324115
product: histone H2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015883812.2
SIO_010081: LOC107324115
subclass of: SO_0000673
so part of: LOC107324115
location: 25747..26752
location: region:25747-26752:1
so has part: feature:25747-26752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25747-26752:1:exon

LOC107324115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A
translation: MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRRGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKAGGAASPAKAGKKGGGQQSQEY
SIO_010081: LOC107324115
subclass of: SO_0000673
so part of: LOC107324115
location: 26029..26457
location: region:26029-26457:1
so has part: feature:26029-26457:1:exon

XP_015739298.1
type: Protein
SIO_000068: ncbiprotein

position:26029:1
position: 26029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26457:1
position: 26457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26029-26457:1:exon

HMBS
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(27165..34842)
location: region:27165-34842:-1
so has part: feature:27165-34842:-1:exon
subclass of: SO_0000010

107324114
type: Gene
SIO_000068: ncbigene

position:27165:-1
position: 27165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34842:-1
position: 34842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27165-34842:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_015883809.2
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27165..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34579..34635,34710..34842))
location: region:27165-34842:-1
so has part: feature:34710-34842:-1:exon
so has part: feature:34579-34635:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27165-27500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34842:-1:exon

position:34710:-1
position: 34710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34579-34635:-1:exon

position:34579:-1
position: 34579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34635:-1
position: 34635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33398-33470:-1:exon

position:33398:-1
position: 33398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33470:-1
position: 33470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32846-32895:-1:exon

position:32846:-1
position: 32846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32895:-1
position: 32895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32676-32731:-1:exon

position:32676:-1
position: 32676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32731:-1
position: 32731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31988-32065:-1:exon

position:31988:-1
position: 31988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32065:-1
position: 32065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:31627-31704:-1:exon

position:31627:-1
position: 31627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31704:-1
position: 31704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31020-31095:-1:exon

position:31020:-1
position: 31020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31095:-1
position: 31095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:30275-30388:-1:exon

position:30275:-1
position: 30275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30388:-1
position: 30388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:30123-30161:-1:exon

position:30123:-1
position: 30123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30161:-1
position: 30161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:28869-28988:-1:exon

position:28869:-1
position: 28869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28988:-1
position: 28988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:28580-28633:-1:exon

position:28580:-1
position: 28580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28633:-1
position: 28633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:28031-28117:-1:exon

position:28031:-1
position: 28031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28117:-1
position: 28117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:27165-27500:-1:exon

position:27500:-1
position: 27500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015883810.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27165..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34710..34745))
location: region:27165-34745:-1
so has part: feature:34710-34745:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27165-27500:-1:exon

position:34745:-1
position: 34745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33398-33470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31988-32065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27165-27500:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_015883811.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27165..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32129,32676..32731,32846..32895,33398..33465))
location: region:27165-33465:-1
so has part: feature:33398-33465:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32129:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27165-27500:-1:exon

position:33465:-1
position: 33465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33398-33465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31988-32129:-1:exon

position:32129:-1
position: 32129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27165-27500:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_032449070.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27190..27526,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34579..34635,34710..34842))
location: region:27190-34842:-1
so has part: feature:34710-34842:-1:exon
so has part: feature:34579-34635:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27190-27526:-1:exon

position:27190:-1
position: 27190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34579-34635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33398-33470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31988-32065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27190-27526:-1:exon

position:27526:-1
position: 27526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X3
translation: MAEQRPALARIQTDSVVEMLQEFYPDLRFEIIAMSTIGDKILDTALSKIGEKNLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSTLHDGETVLCCIAERAFMKRLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSESLKETMQTSVNYPQQNEDGPNDDVQHVGITAKNVPAQAQEAAENLGIELADLLLSKGAKHILCVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27327..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34710..34730))
location: region:27327-34730:-1
so has part: feature:34710-34730:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27327-27500:-1:exon

XP_015739296.1
type: Protein
SIO_000068: ncbiprotein

position:27327:-1
position: 27327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34730:-1
position: 34730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33398-33470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31988-32065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27327-27500:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X1
translation: MAEQRPAGRNGVGGGRAIRVGTRRSQLARIQTDSVVEMLQEFYPDLRFEIIAMSTIGDKILDTALSKIGEKNLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSTLHDGETVLCCIAERAFMKRLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSESLKETMQTSVNYPQQNEDGPNDDVQHVGITAKNVPAQAQEAAENLGIELADLLLSKGAKHILCVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27327..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34579..34635,34710..34730))
location: region:27327-34730:-1
so has part: feature:34710-34730:-1:exon
so has part: feature:34579-34635:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27327-27500:-1:exon

XP_015739295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34579-34635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33398-33470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31988-32065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27327-27500:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X4
translation: MHLKEMSLWHCITQPSAQCCDYCSLIHRVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSTLHDGETVLCCIAERAFMKRLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSESLKETMQTSVNYPQQNEDGPNDDVQHVGITAKNVPAQAQEAAENLGIELADLLLSKGAKHILCVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27327..27500,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32129,32676..32694))
location: region:27327-32694:-1
so has part: feature:32676-32694:-1:exon
so has part: feature:31988-32129:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27327-27500:-1:exon

XP_015739297.1
type: Protein
SIO_000068: ncbiprotein

position:32694:-1
position: 32694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32676-32694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31988-32129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27327-27500:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X2
translation: MAEQRPAGRNGVGGGRAIRVGTRRSQLARIQTDSVVEMLQEFYPDLRFEIIAMSTIGDKILDTALSKIGEKNLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSTLHDGETVLCCIAERAFMKRLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSESLKETMQTSVNYPQQPYFDVCTCRMKMDQMMMCSMLASQPRTSLLRPRKLQRTLALNWLIYC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(27383..27526,28031..28117,28580..28633,28869..28988,30123..30161,30275..30388,31020..31095,31627..31704,31988..32065,32676..32731,32846..32895,33398..33470,34579..34635,34710..34730))
location: region:27383-34730:-1
so has part: feature:34710-34730:-1:exon
so has part: feature:34579-34635:-1:exon
so has part: feature:33398-33470:-1:exon
so has part: feature:32846-32895:-1:exon
so has part: feature:32676-32731:-1:exon
so has part: feature:31988-32065:-1:exon
so has part: feature:31627-31704:-1:exon
so has part: feature:31020-31095:-1:exon
so has part: feature:30275-30388:-1:exon
so has part: feature:30123-30161:-1:exon
so has part: feature:28869-28988:-1:exon
so has part: feature:28580-28633:-1:exon
so has part: feature:28031-28117:-1:exon
so has part: feature:27383-27526:-1:exon

XP_032304961.1
type: Protein
SIO_000068: ncbiprotein

position:27383:-1
position: 27383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34710-34730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34579-34635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33398-33470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32846-32895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32676-32731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31988-32065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31627-31704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31020-31095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30275-30388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30123-30161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28869-28988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28580-28633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28031-28117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27383-27526:-1:exon

VPS11
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(34856..43028)
location: region:34856-43028:-1
so has part: feature:34856-43028:-1:exon
subclass of: SO_0000010

107324107
type: Gene
SIO_000068: ncbigene

position:34856:-1
position: 34856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43028:-1
position: 43028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34856-43028:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032449064.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34856..35112,35551..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42558,42932..43028))
location: region:34856-43028:-1
so has part: feature:42932-43028:-1:exon
so has part: feature:41925-42558:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35551-36044:-1:exon
so has part: feature:34856-35112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42932-43028:-1:exon

position:42932:-1
position: 42932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41925-42558:-1:exon

position:41925:-1
position: 41925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42558:-1
position: 42558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41434-41582:-1:exon

position:41434:-1
position: 41434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41582:-1
position: 41582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41180-41315:-1:exon

position:41180:-1
position: 41180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41315:-1
position: 41315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40775-40938:-1:exon

position:40775:-1
position: 40775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40938:-1
position: 40938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40428-40675:-1:exon

position:40428:-1
position: 40428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40675:-1
position: 40675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40129-40330:-1:exon

position:40129:-1
position: 40129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40330:-1
position: 40330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39706-39857:-1:exon

position:39706:-1
position: 39706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39857:-1
position: 39857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:39314-39500:-1:exon

position:39314:-1
position: 39314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39500:-1
position: 39500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:38773-38916:-1:exon

position:38773:-1
position: 38773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38916:-1
position: 38916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:38101-38289:-1:exon

position:38101:-1
position: 38101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38289:-1
position: 38289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:37637-37798:-1:exon

position:37637:-1
position: 37637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37798:-1
position: 37798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:37061-37200:-1:exon

position:37061:-1
position: 37061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37200:-1
position: 37200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:36566-36768:-1:exon

position:36566:-1
position: 36566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36768:-1
position: 36768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:35551-36044:-1:exon

position:35551:-1
position: 35551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36044:-1
position: 36044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:34856-35112:-1:exon

position:35112:-1
position: 35112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032449065.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34856..35112,35551..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42558,42655..43027))
location: region:34856-43027:-1
so has part: feature:42655-43027:-1:exon
so has part: feature:41925-42558:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35551-36044:-1:exon
so has part: feature:34856-35112:-1:exon

position:43027:-1
position: 43027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42655-43027:-1:exon

position:42655:-1
position: 42655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41925-42558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41434-41582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41180-41315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40775-40938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40428-40675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40129-40330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39706-39857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39314-39500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38773-38916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:38101-38289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37637-37798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:37061-37200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:36566-36768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:35551-36044:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:34856-35112:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_015883798.2
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34856..35112,35551..35773,35873..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42558,42655..43023))
location: region:34856-43023:-1
so has part: feature:42655-43023:-1:exon
so has part: feature:41925-42558:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35873-36044:-1:exon
so has part: feature:35551-35773:-1:exon
so has part: feature:34856-35112:-1:exon

position:43023:-1
position: 43023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42655-43023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41925-42558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41434-41582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41180-41315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40775-40938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40428-40675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40129-40330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39706-39857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39314-39500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38773-38916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:38101-38289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37637-37798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:37061-37200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:36566-36768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:35873-36044:-1:exon

position:35873:-1
position: 35873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:35551-35773:-1:exon

position:35773:-1
position: 35773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:34856-35112:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X2
translation: MAAYLQWRRFVFFDRELVKEPPGLDGGGGKPFALPPGITVCDSGRGSLVFGDMEGRIWFLPRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDTHGCGLHCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSEAQNSDKQVLNIYDLCNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDAQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSTKLEEFIKASESEVRFDVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKILMHHVPKETTELLKNLCTDYRPSGDSEGSGILEGKKANSEEFIPIFANNSRELKAFLEHMTEVQSDSPQGVYDTLLELRLQNWAHELDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQRIQKYREETTRIRKEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLQCSNDGFSVVADYFGRGVFNKLTLITDLPLGKSATTIEAGLQRELLMHAKRNT
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34948..35112,35551..35773,35873..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42078))
location: region:34948-42078:-1
so has part: feature:41925-42078:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35873-36044:-1:exon
so has part: feature:35551-35773:-1:exon
so has part: feature:34948-35112:-1:exon

XP_015739284.1
type: Protein
SIO_000068: ncbiprotein

position:34948:-1
position: 34948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42078:-1
position: 42078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41925-42078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41434-41582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41180-41315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40775-40938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40428-40675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40129-40330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39706-39857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39314-39500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38773-38916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38101-38289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37637-37798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37061-37200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36566-36768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35873-36044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:35551-35773:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:34948-35112:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X1
translation: MAAYLQWRRFVFFDRELVKEPPGLDGGGGKPFALPPGITVCDSGRGSLVFGDMEGRIWFLPRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDTHGCGLHCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSEAQNSDKQVLNIYDLCNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDAQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSTKLEEFIKASESEVRFDVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKILMHHVPKETTELLKNLCTDYRPSGDSEGSGILEGKKANSEEFIPIFANNSRELKAFLEHMTEVQSDSPQGVYDTLLELRLQNWAHELDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQRIQKYREETTRIRKEIEELKARCRTVMSCLILKYYFLTKEKYIFFFPSAFSPCFSPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLQCSNDGFSVVADYFGRGVFNKLTLITDLPLGKSATTIEAGLQRELLMHAKRNT
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34948..35112,35551..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42078))
location: region:34948-42078:-1
so has part: feature:41925-42078:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35551-36044:-1:exon
so has part: feature:34948-35112:-1:exon

XP_032304955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41925-42078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41434-41582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41180-41315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40775-40938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40428-40675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40129-40330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39706-39857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39314-39500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38773-38916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38101-38289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37637-37798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37061-37200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36566-36768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35551-36044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:34948-35112:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X1
translation: MAAYLQWRRFVFFDRELVKEPPGLDGGGGKPFALPPGITVCDSGRGSLVFGDMEGRIWFLPRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDTHGCGLHCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSEAQNSDKQVLNIYDLCNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDAQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSTKLEEFIKASESEVRFDVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKILMHHVPKETTELLKNLCTDYRPSGDSEGSGILEGKKANSEEFIPIFANNSRELKAFLEHMTEVQSDSPQGVYDTLLELRLQNWAHELDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQRIQKYREETTRIRKEIEELKARCRTVMSCLILKYYFLTKEKYIFFFPSAFSPCFSPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLQCSNDGFSVVADYFGRGVFNKLTLITDLPLGKSATTIEAGLQRELLMHAKRNT
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(34948..35112,35551..36044,36566..36768,37061..37200,37637..37798,38101..38289,38773..38916,39314..39500,39706..39857,40129..40330,40428..40675,40775..40938,41180..41315,41434..41582,41925..42078))
location: region:34948-42078:-1
so has part: feature:41925-42078:-1:exon
so has part: feature:41434-41582:-1:exon
so has part: feature:41180-41315:-1:exon
so has part: feature:40775-40938:-1:exon
so has part: feature:40428-40675:-1:exon
so has part: feature:40129-40330:-1:exon
so has part: feature:39706-39857:-1:exon
so has part: feature:39314-39500:-1:exon
so has part: feature:38773-38916:-1:exon
so has part: feature:38101-38289:-1:exon
so has part: feature:37637-37798:-1:exon
so has part: feature:37061-37200:-1:exon
so has part: feature:36566-36768:-1:exon
so has part: feature:35551-36044:-1:exon
so has part: feature:34948-35112:-1:exon

XP_032304956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41925-42078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41434-41582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41180-41315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40775-40938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40428-40675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40129-40330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39706-39857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39314-39500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38773-38916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38101-38289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37637-37798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37061-37200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36566-36768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35551-36044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:34948-35112:-1:exon

SIK2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43105..69549
location: region:43105-69549:1
so has part: feature:43105-69549:1:exon
subclass of: SO_0000010

107324108
type: Gene
SIO_000068: ncbigene

position:43105:1
position: 43105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69549:1
position: 69549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43105-69549:1:exon

SIK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SIK2
product: salt inducible kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_015883800.2
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43105..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63117..63207,63726..63839,64470..64561,65744..66253)
location: region:43105-66253:1
so has part: feature:43105-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63117-63207:1:exon
so has part: feature:63726-63839:1:exon
so has part: feature:64470-64561:1:exon
so has part: feature:65744-66253:1:exon

position:66253:1
position: 66253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43105-43358:1:exon

position:43358:1
position: 43358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

position:47993:1
position: 47993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48109:1
position: 48109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

position:48399:1
position: 48399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48462:1
position: 48462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

position:50286:1
position: 50286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50447:1
position: 50447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

position:54491:1
position: 54491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54615:1
position: 54615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

position:55680:1
position: 55680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55803:1
position: 55803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

position:57378:1
position: 57378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57598:1
position: 57598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

position:58203:1
position: 58203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58355:1
position: 58355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

position:59389:1
position: 59389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59553:1
position: 59553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

position:61365:1
position: 61365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61593:1
position: 61593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

position:62145:1
position: 62145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62411:1
position: 62411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

position:62544:1
position: 62544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62707:1
position: 62707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:63117-63207:1:exon

position:63117:1
position: 63117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63207:1
position: 63207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:63726-63839:1:exon

position:63726:1
position: 63726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63839:1
position: 63839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:64470-64561:1:exon

position:64470:1
position: 64470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64561:1
position: 64561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:65744-66253:1:exon

position:65744:1
position: 65744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SIK2
product: salt inducible kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032449066.1
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43105..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63117..63260,63726..63833)
location: region:43105-63833:1
so has part: feature:43105-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63117-63260:1:exon
so has part: feature:63726-63833:1:exon

position:63833:1
position: 63833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43105-43358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63117-63260:1:exon

position:63260:1
position: 63260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:63726-63833:1:exon

SIK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SIK2
product: salt inducible kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_015883799.2
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43106..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63726..63839,64470..64561,65744..69549)
location: region:43106-69549:1
so has part: feature:43106-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63726-63839:1:exon
so has part: feature:64470-64561:1:exon
so has part: feature:65744-69549:1:exon

position:43106:1
position: 43106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43106-43358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63726-63839:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64470-64561:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65744-69549:1:exon

SIK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK2 isoform X1
translation: MVMAEPRRPPPLLPRGPGPVRVGFYDIEGTLGKGNFAVVKLARHRITRSEVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEFAKNGEIFDYLASHGRLSESEARRKFWQILSAVEYCHSRKVVHRDLKAENLLLDNNMNIKIADFGFGNFYKSGEPLTTWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPAQRSIIYAPGQENQPSIGEYNEQVLRLMHSLGIDQQKTTESLQNKSYNHFAAIYYLLVERLKSHRSSFPVEQRFDARQRRPSTIAEQTVAKAQAVVPSVNLCSENTRLLRSPGLPPTSGAEAFSFPPSNCQTDTTFMEEERVNTPKVNGCLLDPVPPMVMRKGCQSLPSTMMETSIDEGIETEGEAEDDPAQSFAALQAARSGKRRHTLAEVTDQLAAVPGKGKVYSLDENSSLGSSIESEYDMGSVQRNVGLLGDAPPLKDVVPLASPFLGLRPTNPAMQALASQKRETHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLARTKGILELNKVQLLYEQMRSEEEPLLPSAAPQLQDLATNPAQEETPQQQEAAGTFPSGAHTPVLSRRLSLETQYLQHRLQKPTLLSKAPNTCQLYCKELPRSLEQQLQEHRLHQKRLFLQKQSQLQAYFNQMQIAESSYPRSSQMPLSCQEEQQPSAQQQSTQFSLQQALSPVMEPSSEQMQYNLFLSHYQKVQLEPPPPSPITSSSQLSSPIQVQQPAQSLQYSYQTCELPVVTSSEPDYPDQCQYSMDPAQQSGVALPDSQGSLTAHEPQSNYDALALSELPGLFDCEMMETVDPQHSGYVLVN
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43209..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63726..63839,64470..64561,65744..66332)
location: region:43209-66332:1
so has part: feature:43209-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63726-63839:1:exon
so has part: feature:64470-64561:1:exon
so has part: feature:65744-66332:1:exon

XP_015739285.1
type: Protein
SIO_000068: ncbiprotein

position:43209:1
position: 43209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66332:1
position: 66332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43209-43358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63726-63839:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64470-64561:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65744-66332:1:exon

SIK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK2 isoform X2
translation: MVMAEPRRPPPLLPRGPGPVRVGFYDIEGTLGKGNFAVVKLARHRITRSEVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEFAKNGEIFDYLASHGRLSESEARRKFWQILSAVEYCHSRKVVHRDLKAENLLLDNNMNIKIADFGFGNFYKSGEPLTTWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPAQRSIIYAPGQENQPSIGEYNEQVLRLMHSLGIDQQKTTESLQNKSYNHFAAIYYLLVERLKSHRSSFPVEQRFDARQRRPSTIAEQTVAKAQAVVPSVNLCSENTRLLRSPGLPPTSGAEAFSFPPSNCQTDTTFMEEERVNTPKVNGCLLDPVPPMVMRKGCQSLPSTMMETSIDEGIETEGEAEDDPAQSFAALQAARSGKRRHTLAEVTDQLAAVPGKGKVYSLDENSSLGSSIESEYDMGSVQRNVGLLGDAPPLKDVVPLASPFLGLRPTNPAMQALASQKRETHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLARTKGILELNKVQLLYEQMRSEEEPLLPSAAPQLQDLATNPAQVAGNRNVKSLSDSVNETGQQHTCTASTHAPGRNTSAAGGCRHFPQWRTYPSVIPTTELRDTVLAAQAPETHPSIKSSKHLPAVLQRIAPESGTAVAGAQAASEETLSPEAVPAAGLF
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43209..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63117..63207,63726..63839,64470..64561,65744..65800)
location: region:43209-65800:1
so has part: feature:43209-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63117-63207:1:exon
so has part: feature:63726-63839:1:exon
so has part: feature:64470-64561:1:exon
so has part: feature:65744-65800:1:exon

XP_015739286.1
type: Protein
SIO_000068: ncbiprotein

position:65800:1
position: 65800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43209-43358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63117-63207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:63726-63839:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:64470-64561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65744-65800:1:exon

SIK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK2 isoform X3
translation: MVMAEPRRPPPLLPRGPGPVRVGFYDIEGTLGKGNFAVVKLARHRITRSEVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEFAKNGEIFDYLASHGRLSESEARRKFWQILSAVEYCHSRKVVHRDLKAENLLLDNNMNIKIADFGFGNFYKSGEPLTTWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPAQRSIIYAPGQENQPSIGEYNEQVLRLMHSLGIDQQKTTESLQNKSYNHFAAIYYLLVERLKSHRSSFPVEQRFDARQRRPSTIAEQTVAKAQAVVPSVNLCSENTRLLRSPGLPPTSGAEAFSFPPSNCQTDTTFMEEERVNTPKVNGCLLDPVPPMVMRKGCQSLPSTMMETSIDEGIETEGEAEDDPAQSFAALQAARSGKRRHTLAEVTDQLAAVPGKGKVYSLDENSSLGSSIESEYDMGSVQRNVGLLGDAPPLKDVVPLASPFLGLRPTNPAMQALASQKRETHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLARTKGILELNKVQLLYEQMRSEEEPLLPSAAPQLQDLATNPAQVAGNRNVKSLSDSVNETGQQHTCTASTHAPGRACCSFLTAGKLQF
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(43209..43358,47993..48109,48399..48462,50286..50447,54491..54615,55680..55803,57378..57598,58203..58355,59389..59553,61365..61593,62145..62411,62544..62707,63117..63254)
location: region:43209-63254:1
so has part: feature:43209-43358:1:exon
so has part: feature:47993-48109:1:exon
so has part: feature:48399-48462:1:exon
so has part: feature:50286-50447:1:exon
so has part: feature:54491-54615:1:exon
so has part: feature:55680-55803:1:exon
so has part: feature:57378-57598:1:exon
so has part: feature:58203-58355:1:exon
so has part: feature:59389-59553:1:exon
so has part: feature:61365-61593:1:exon
so has part: feature:62145-62411:1:exon
so has part: feature:62544-62707:1:exon
so has part: feature:63117-63254:1:exon

XP_032304957.1
type: Protein
SIO_000068: ncbiprotein

position:63254:1
position: 63254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43209-43358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47993-48109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54491-54615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55680-55803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57378-57598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58203-58355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59389-59553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61365-61593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62145-62411:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62544-62707:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63117-63254:1:exon

PKNOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56476..147541)
location: region:56476-147541:-1
so has part: feature:56476-147541:-1:exon
subclass of: SO_0000010

107324110
type: Gene
SIO_000068: ncbigene

position:56476:-1
position: 56476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147541:-1
position: 147541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56476-147541:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_015883803.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(56476..56896,87559..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107860,113614..113692,114032..114183,145423..145544,147416..147541))
location: region:56476-147541:-1
so has part: feature:147416-147541:-1:exon
so has part: feature:145423-145544:-1:exon
so has part: feature:114032-114183:-1:exon
so has part: feature:113614-113692:-1:exon
so has part: feature:107752-107860:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:87559-89590:-1:exon
so has part: feature:56476-56896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147416-147541:-1:exon

position:147416:-1
position: 147416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145423-145544:-1:exon

position:145423:-1
position: 145423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145544:-1
position: 145544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114032-114183:-1:exon

position:114032:-1
position: 114032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114183:-1
position: 114183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113614-113692:-1:exon

position:113614:-1
position: 113614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113692:-1
position: 113692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107752-107860:-1:exon

position:107752:-1
position: 107752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107860:-1
position: 107860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103264-103400:-1:exon

position:103264:-1
position: 103264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103400:-1
position: 103400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:99449-99620:-1:exon

position:99449:-1
position: 99449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99620:-1
position: 99620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:97150-97338:-1:exon

position:97150:-1
position: 97150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97338:-1
position: 97338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92851-92983:-1:exon

position:92851:-1
position: 92851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92983:-1
position: 92983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92681-92778:-1:exon

position:92681:-1
position: 92681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92778:-1
position: 92778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:91395-91514:-1:exon

position:91395:-1
position: 91395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91514:-1
position: 91514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:90729-90805:-1:exon

position:90729:-1
position: 90729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90805:-1
position: 90805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:90028-90206:-1:exon

position:90028:-1
position: 90028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90206:-1
position: 90206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:87559-89590:-1:exon

position:87559:-1
position: 87559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89590:-1
position: 89590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:56476-56896:-1:exon

position:56896:-1
position: 56896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015883805.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(56476..56896,87559..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107860,111097..111165,113614..113692,114032..114183,145423..145544,147416..147541))
location: region:56476-147541:-1
so has part: feature:147416-147541:-1:exon
so has part: feature:145423-145544:-1:exon
so has part: feature:114032-114183:-1:exon
so has part: feature:113614-113692:-1:exon
so has part: feature:111097-111165:-1:exon
so has part: feature:107752-107860:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:87559-89590:-1:exon
so has part: feature:56476-56896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147416-147541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145423-145544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114032-114183:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113614-113692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111097-111165:-1:exon

position:111097:-1
position: 111097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111165:-1
position: 111165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107752-107860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103264-103400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99449-99620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97150-97338:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92851-92983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92681-92778:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91395-91514:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90729-90805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90028-90206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:87559-89590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:56476-56896:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015883804.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(56476..56896,87559..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107860,113614..113692,114032..114183,145423..145562,147416..147530))
location: region:56476-147530:-1
so has part: feature:147416-147530:-1:exon
so has part: feature:145423-145562:-1:exon
so has part: feature:114032-114183:-1:exon
so has part: feature:113614-113692:-1:exon
so has part: feature:107752-107860:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:87559-89590:-1:exon
so has part: feature:56476-56896:-1:exon

position:147530:-1
position: 147530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147416-147530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145423-145562:-1:exon

position:145562:-1
position: 145562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114032-114183:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113614-113692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107752-107860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103264-103400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99449-99620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97150-97338:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92851-92983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92681-92778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91395-91514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:90729-90805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90028-90206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:87559-89590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:56476-56896:-1:exon

FEZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78451..87132
location: region:78451-87132:1
so has part: feature:78451-87132:1:exon
subclass of: SO_0000010

107324113
type: Gene
SIO_000068: ncbigene

position:78451:1
position: 78451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87132:1
position: 87132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78451-87132:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 61 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_015883808.2
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(78451..78571,79908..80208,81954..82050,82681..82773,82974..83184,84356..84627,84920..85000,85307..85382,86069..86134,86973..87132)
location: region:78451-87132:1
so has part: feature:78451-78571:1:exon
so has part: feature:79908-80208:1:exon
so has part: feature:81954-82050:1:exon
so has part: feature:82681-82773:1:exon
so has part: feature:82974-83184:1:exon
so has part: feature:84356-84627:1:exon
so has part: feature:84920-85000:1:exon
so has part: feature:85307-85382:1:exon
so has part: feature:86069-86134:1:exon
so has part: feature:86973-87132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78451-78571:1:exon

position:78571:1
position: 78571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79908-80208:1:exon

position:79908:1
position: 79908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80208:1
position: 80208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:81954-82050:1:exon

position:81954:1
position: 81954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82050:1
position: 82050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82681-82773:1:exon

position:82681:1
position: 82681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82773:1
position: 82773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82974-83184:1:exon

position:82974:1
position: 82974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83184:1
position: 83184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84356-84627:1:exon

position:84356:1
position: 84356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84627:1
position: 84627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84920-85000:1:exon

position:84920:1
position: 84920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85000:1
position: 85000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85307-85382:1:exon

position:85307:1
position: 85307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85382:1
position: 85382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86069-86134:1:exon

position:86069:1
position: 86069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86134:1
position: 86134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86973-87132:1:exon

position:86973:1
position: 86973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X1
translation: MTSPSPPSPFRACATPPPRPPPVNLLPESGGCGAAAKTAAVARRMEAPLVSLEEEFEEGLGDNGGTPRRTMDPALAELESFSTEMMSFKSMEDLVQEFDEKLTVCFRNYDATTEGLAPVRGRLQAQEEEEHLQDEEVWDALTDGFVPQGSPRPWMHPEAEAPDGTDPQLCEKEDEEEELAERSEHDSGINEEPLLTAEQVIEELEELMQSSPDPEADPEGDEDEEEEEDEEDDAEANAEGDSGSRGMEPIVLRELHTFSPTFNNNCSYEGLEQLTAGELAAAAGRAEAASRALSAELVAQLARRDELAFEKEVKTAFIGALLAVQGEQREQREAARRRRRDRGLSLQGSRPERGGHMPRKRFSMEGISSILHSGLRQTFGPAANEKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEGNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(78466..78571,79908..80208,81954..82050,82681..82773,82974..83184,84356..84627,84920..85000,85307..85382,86069..86134,86973..86989)
location: region:78466-86989:1
so has part: feature:78466-78571:1:exon
so has part: feature:79908-80208:1:exon
so has part: feature:81954-82050:1:exon
so has part: feature:82681-82773:1:exon
so has part: feature:82974-83184:1:exon
so has part: feature:84356-84627:1:exon
so has part: feature:84920-85000:1:exon
so has part: feature:85307-85382:1:exon
so has part: feature:86069-86134:1:exon
so has part: feature:86973-86989:1:exon

XP_015739294.2
type: Protein
SIO_000068: ncbiprotein

position:78466:1
position: 78466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86989:1
position: 86989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78466-78571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79908-80208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81954-82050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82681-82773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82974-83184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84356-84627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84920-85000:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85307-85382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86069-86134:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86973-86989:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032449069.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(78589..78683,79908..80208,81954..82050,82681..82773,82974..83184,84356..84627,84920..85000,85307..85382,86069..86134,86973..87132)
location: region:78589-87132:1
so has part: feature:78589-78683:1:exon
so has part: feature:79908-80208:1:exon
so has part: feature:81954-82050:1:exon
so has part: feature:82681-82773:1:exon
so has part: feature:82974-83184:1:exon
so has part: feature:84356-84627:1:exon
so has part: feature:84920-85000:1:exon
so has part: feature:85307-85382:1:exon
so has part: feature:86069-86134:1:exon
so has part: feature:86973-87132:1:exon

position:78589:1
position: 78589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78589-78683:1:exon

position:78683:1
position: 78683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79908-80208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81954-82050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82681-82773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82974-83184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84356-84627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84920-85000:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85307-85382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86069-86134:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86973-87132:1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X2
translation: MGRDPRGGVGVRETGAAAGGEWVHAKTAAVARRMEAPLVSLEEEFEEGLGDNGGTPRRTMDPALAELESFSTEMMSFKSMEDLVQEFDEKLTVCFRNYDATTEGLAPVRGRLQAQEEEEHLQDEEVWDALTDGFVPQGSPRPWMHPEAEAPDGTDPQLCEKEDEEEELAERSEHDSGINEEPLLTAEQVIEELEELMQSSPDPEADPEGDEDEEEEEDEEDDAEANAEGDSGSRGMEPIVLRELHTFSPTFNNNCSYEGLEQLTAGELAAAAGRAEAASRALSAELVAQLARRDELAFEKEVKTAFIGALLAVQGEQREQREAARRRRRDRGLSLQGSRPERGGHMPRKRFSMEGISSILHSGLRQTFGPAANEKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEGNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(78611..78683,79908..80208,81954..82050,82681..82773,82974..83184,84356..84627,84920..85000,85307..85382,86069..86134,86973..86989)
location: region:78611-86989:1
so has part: feature:78611-78683:1:exon
so has part: feature:79908-80208:1:exon
so has part: feature:81954-82050:1:exon
so has part: feature:82681-82773:1:exon
so has part: feature:82974-83184:1:exon
so has part: feature:84356-84627:1:exon
so has part: feature:84920-85000:1:exon
so has part: feature:85307-85382:1:exon
so has part: feature:86069-86134:1:exon
so has part: feature:86973-86989:1:exon

XP_032304960.1
type: Protein
SIO_000068: ncbiprotein

position:78611:1
position: 78611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78611-78683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79908-80208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81954-82050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82681-82773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82974-83184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84356-84627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84920-85000:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85307-85382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86069-86134:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86973-86989:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDSPQMTATAQQPSKAQPVHLSATPAPTAAVPPAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGSGAGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLAMDNLQPLSSATATMAMQQAMLAAHEDSLDGTEEDDDEEDEDEMEEEEEEEEELEEEPGGLPAAPGTNLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(89346..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107835))
location: region:89346-107835:-1
so has part: feature:107752-107835:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:89346-89590:-1:exon

XP_015739289.1
type: Protein
SIO_000068: ncbiprotein

position:89346:-1
position: 89346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107835:-1
position: 107835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107752-107835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103264-103400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99449-99620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97150-97338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92851-92983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92681-92778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91395-91514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90729-90805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90028-90206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89346-89590:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDSPQMTATAQQPSKAQPVHLSATPAPTAAVPPAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGSGAGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLAMDNLQPLSSATATMAMQQAMLAAHEDSLDGTEEDDDEEDEDEMEEEEEEEEELEEEPGGLPAAPGTNLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(89346..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107835))
location: region:89346-107835:-1
so has part: feature:107752-107835:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:89346-89590:-1:exon

XP_015739290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107752-107835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103264-103400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99449-99620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97150-97338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92851-92983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92681-92778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91395-91514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90729-90805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90028-90206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89346-89590:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDSPQMTATAQQPSKAQPVHLSATPAPTAAVPPAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGSGAGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLAMDNLQPLSSATATMAMQQAMLAAHEDSLDGTEEDDDEEDEDEMEEEEEEEEELEEEPGGLPAAPGTNLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(89346..89590,90028..90206,90729..90805,91395..91514,92681..92778,92851..92983,97150..97338,99449..99620,103264..103400,107752..107835))
location: region:89346-107835:-1
so has part: feature:107752-107835:-1:exon
so has part: feature:103264-103400:-1:exon
so has part: feature:99449-99620:-1:exon
so has part: feature:97150-97338:-1:exon
so has part: feature:92851-92983:-1:exon
so has part: feature:92681-92778:-1:exon
so has part: feature:91395-91514:-1:exon
so has part: feature:90729-90805:-1:exon
so has part: feature:90028-90206:-1:exon
so has part: feature:89346-89590:-1:exon

XP_015739291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107752-107835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103264-103400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99449-99620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97150-97338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92851-92983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92681-92778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91395-91514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90729-90805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90028-90206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89346-89590:-1:exon

TMEM218
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153249..154962
location: region:153249-154962:1
so has part: feature:153249-154962:1:exon
subclass of: SO_0000010

107324252
type: Gene
SIO_000068: ncbigene

position:153249:1
position: 153249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154962:1
position: 154962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153249-154962:1:exon

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMEM218
product: transmembrane protein 218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_015884105.2
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(153249..153389,153639..153741,154384..154962)
location: region:153249-154962:1
so has part: feature:153249-153389:1:exon
so has part: feature:153639-153741:1:exon
so has part: feature:154384-154962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153249-153389:1:exon

position:153389:1
position: 153389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153639-153741:1:exon

position:153639:1
position: 153639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153741:1
position: 153741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154384-154962:1:exon

position:154384:1
position: 154384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218
translation: MAGAVAVGPGAVLLAGLWGAALLLCLLLARAHGATRLWALPVPLCAALLSAALLLYPREDGTAGPGPGPQIVDTFVVGRLVLLVFMALLLVGCVLLLGMHLLEPIHARPLRCWR
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(153283..153389,153639..153741,154384..154518)
location: region:153283-154518:1
so has part: feature:153283-153389:1:exon
so has part: feature:153639-153741:1:exon
so has part: feature:154384-154518:1:exon

XP_015739591.2
type: Protein
SIO_000068: ncbiprotein

position:153283:1
position: 153283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154518:1
position: 154518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153283-153389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153639-153741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154384-154518:1:exon

SLC37A2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156927..164049)
location: region:156927-164049:-1
so has part: feature:156927-164049:-1:exon
subclass of: SO_0000010

107324248
type: Gene
SIO_000068: ncbigene

position:156927:-1
position: 156927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164049:-1
position: 164049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156927-164049:-1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015884102.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(156927..157186,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..164049))
location: region:156927-164049:-1
so has part: feature:163939-164049:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:156927-157186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163939-164049:-1:exon

position:163939:-1
position: 163939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

position:162225:-1
position: 162225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162306:-1
position: 162306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

position:162039:-1
position: 162039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162126:-1
position: 162126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

position:161616:-1
position: 161616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161694:-1
position: 161694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

position:161394:-1
position: 161394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161529:-1
position: 161529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

position:161147:-1
position: 161147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161223:-1
position: 161223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

position:160910:-1
position: 160910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161076:-1
position: 161076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

position:160582:-1
position: 160582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160619:-1
position: 160619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

position:160236:-1
position: 160236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160355:-1
position: 160355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

position:160065:-1
position: 160065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160155:-1
position: 160155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

position:159918:-1
position: 159918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159980:-1
position: 159980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

position:159593:-1
position: 159593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159678:-1
position: 159678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

position:159192:-1
position: 159192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159240:-1
position: 159240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

position:158825:-1
position: 158825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158898:-1
position: 158898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

position:158458:-1
position: 158458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158536:-1
position: 158536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

position:158259:-1
position: 158259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158356:-1
position: 158356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

position:158073:-1
position: 158073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158137:-1
position: 158137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:156927-157186:-1:exon

position:157186:-1
position: 157186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015884100.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(156927..157186,157944..157992,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..164048))
location: region:156927-164048:-1
so has part: feature:163939-164048:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:157944-157992:-1:exon
so has part: feature:156927-157186:-1:exon

position:164048:-1
position: 164048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163939-164048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157944-157992:-1:exon

position:157944:-1
position: 157944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157992:-1
position: 157992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:156927-157186:-1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015884101.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(156927..157186,157438..157464,157944..157992,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..164048))
location: region:156927-164048:-1
so has part: feature:163939-164048:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:157944-157992:-1:exon
so has part: feature:157438-157464:-1:exon
so has part: feature:156927-157186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163939-164048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157944-157992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157438-157464:-1:exon

position:157438:-1
position: 157438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157464:-1
position: 157464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:156927-157186:-1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X2
translation: MRAALAPGVRLLRAVPRDSRYRGLTLVLTFLSYTSYHLSRKPISIVKSQLHLNCSALGSNPHNDSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMLLSGIFTALFGFGYFWNIHVLWYFIIVQVCNGLAQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGAWVSSQWGLSFIVPGIIIAVVGIVCFFFLVEHPEDVGCSPPLQHDTSDEKDPEGVTSEDRSTTDPKELNEELEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYTGGRATTCCVMLVVAAPMLFLYNHVGQNGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRAWYGCMARKRGFQQF
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(157171..157186,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..163997))
location: region:157171-163997:-1
so has part: feature:163939-163997:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:157171-157186:-1:exon

XP_015739588.1
type: Protein
SIO_000068: ncbiprotein

position:157171:-1
position: 157171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163997:-1
position: 163997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163939-163997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157171-157186:-1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X1
translation: MRAALAPGVRLLRAVPRDSRYRGLTLVLTFLSYTSYHLSRKPISIVKSQLHLNCSALGSNPHNDSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMLLSGIFTALFGFGYFWNIHVLWYFIIVQVCNGLAQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGAWVSSQWGLSFIVPGIIIAVVGIVCFFFLVEHPEDVGCSPPLQHDTSDEKDPEGVTSEDRSTTDPKELNEELEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYTGGRATTCCVMLVVAAPMLFLYNHVGQNGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRAWYGCMARKRGSSVQLTESVLDGK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(157950..157992,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..163997))
location: region:157950-163997:-1
so has part: feature:163939-163997:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:157950-157992:-1:exon

XP_015739586.1
type: Protein
SIO_000068: ncbiprotein

position:157950:-1
position: 157950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163939-163997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157950-157992:-1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X1
translation: MRAALAPGVRLLRAVPRDSRYRGLTLVLTFLSYTSYHLSRKPISIVKSQLHLNCSALGSNPHNDSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMLLSGIFTALFGFGYFWNIHVLWYFIIVQVCNGLAQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGAWVSSQWGLSFIVPGIIIAVVGIVCFFFLVEHPEDVGCSPPLQHDTSDEKDPEGVTSEDRSTTDPKELNEELEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYTGGRATTCCVMLVVAAPMLFLYNHVGQNGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRAWYGCMARKRGSSVQLTESVLDGK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(157950..157992,158073..158137,158259..158356,158458..158536,158825..158898,159192..159240,159593..159678,159918..159980,160065..160155,160236..160355,160582..160619,160910..161076,161147..161223,161394..161529,161616..161694,162039..162126,162225..162306,163939..163997))
location: region:157950-163997:-1
so has part: feature:163939-163997:-1:exon
so has part: feature:162225-162306:-1:exon
so has part: feature:162039-162126:-1:exon
so has part: feature:161616-161694:-1:exon
so has part: feature:161394-161529:-1:exon
so has part: feature:161147-161223:-1:exon
so has part: feature:160910-161076:-1:exon
so has part: feature:160582-160619:-1:exon
so has part: feature:160236-160355:-1:exon
so has part: feature:160065-160155:-1:exon
so has part: feature:159918-159980:-1:exon
so has part: feature:159593-159678:-1:exon
so has part: feature:159192-159240:-1:exon
so has part: feature:158825-158898:-1:exon
so has part: feature:158458-158536:-1:exon
so has part: feature:158259-158356:-1:exon
so has part: feature:158073-158137:-1:exon
so has part: feature:157950-157992:-1:exon

XP_015739587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163939-163997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162225-162306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162039-162126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161616-161694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161394-161529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161147-161223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160910-161076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160582-160619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160236-160355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160065-160155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159918-159980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159593-159678:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:159192-159240:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158825-158898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158458-158536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158259-158356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158073-158137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157950-157992:-1:exon

CCDC15
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(165476..178669)
location: region:165476-178669:-1
so has part: feature:165476-178669:-1:exon
subclass of: SO_0000010

107324249
type: Gene
SIO_000068: ncbigene

position:165476:-1
position: 165476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178669:-1
position: 178669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165476-178669:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CCDC15
product: coiled-coil domain containing 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032449074.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(165476..165818,165958..166106,166175..166354,168445..168548,170301..170420,171518..171676,174157..174297,174766..174954,175759..175908,178175..178381,178600..178669))
location: region:165476-178669:-1
so has part: feature:178600-178669:-1:exon
so has part: feature:178175-178381:-1:exon
so has part: feature:175759-175908:-1:exon
so has part: feature:174766-174954:-1:exon
so has part: feature:174157-174297:-1:exon
so has part: feature:171518-171676:-1:exon
so has part: feature:170301-170420:-1:exon
so has part: feature:168445-168548:-1:exon
so has part: feature:166175-166354:-1:exon
so has part: feature:165958-166106:-1:exon
so has part: feature:165476-165818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178600-178669:-1:exon

position:178600:-1
position: 178600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178175-178381:-1:exon

position:178175:-1
position: 178175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178381:-1
position: 178381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175759-175908:-1:exon

position:175759:-1
position: 175759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175908:-1
position: 175908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174766-174954:-1:exon

position:174766:-1
position: 174766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174954:-1
position: 174954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174157-174297:-1:exon

position:174157:-1
position: 174157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174297:-1
position: 174297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171518-171676:-1:exon

position:171518:-1
position: 171518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171676:-1
position: 171676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170301-170420:-1:exon

position:170301:-1
position: 170301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170420:-1
position: 170420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168445-168548:-1:exon

position:168445:-1
position: 168445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168548:-1
position: 168548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166175-166354:-1:exon

position:166175:-1
position: 166175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166354:-1
position: 166354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:165958-166106:-1:exon

position:165958:-1
position: 165958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166106:-1
position: 166106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:165476-165818:-1:exon

position:165818:-1
position: 165818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MLPSCRLRPRATTGRTERPPRAGRALLGERSLRVAPVGAWVESGPREQSPAFVSEGLCPTWASAFQVEEELKEQQRRKAMRLRHFQGEVKRRVNQQIRMRRKQQLQRCWEAVEKESNLAVQCLGSVLHLTPKKNTCVFRSRPAPAICSPSAHAALAQQQEPGVPSEPFQQQAAQLSKAMRQVRRRLASCQAVSKGTEASELPGSTWRLGQRQDVRRAAGQEESVLYAPLPTEGESEELILAGHHDLPAELQDQMTASHQAEQGDDFCIKMEFRKFSDGSAKDLSTPESLQRTTLGCQAPLVLWAGIDQEESKKQHQNEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQEVAKQQKTFLGEGVCEVLAQLELEERRLKKVKQKEQRNKEYTRYVEALRAEVKEKMKLYNIDLPPLCSCSSDFWESHPDTCANNCIFYKNHKAYSHALRSVISSCDLVDGRPKLLLHHLAALFTCPAKL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(165706..165818,165958..166106,166175..166354,168445..168548,170301..170420,171518..171676,174157..174297,174766..174954,175759..175908,178175..178357))
location: region:165706-178357:-1
so has part: feature:178175-178357:-1:exon
so has part: feature:175759-175908:-1:exon
so has part: feature:174766-174954:-1:exon
so has part: feature:174157-174297:-1:exon
so has part: feature:171518-171676:-1:exon
so has part: feature:170301-170420:-1:exon
so has part: feature:168445-168548:-1:exon
so has part: feature:166175-166354:-1:exon
so has part: feature:165958-166106:-1:exon
so has part: feature:165706-165818:-1:exon

XP_032304965.1
type: Protein
SIO_000068: ncbiprotein

position:165706:-1
position: 165706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178357:-1
position: 178357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178175-178357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175759-175908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174766-174954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174157-174297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171518-171676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170301-170420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168445-168548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166175-166354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165958-166106:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165706-165818:-1:exon

HEPACAM
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178873..184304
location: region:178873-184304:1
so has part: feature:178873-184304:1:exon
subclass of: SO_0000010

107324250
type: Gene
SIO_000068: ncbigene

position:178873:1
position: 178873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184304:1
position: 184304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178873-184304:1:exon

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HEPACAM
product: hepatic and glial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_015884104.2
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(178873..179468,181097..181438,181675..181956,182045..182138,182631..182701,182769..182839,182912..184304)
location: region:178873-184304:1
so has part: feature:178873-179468:1:exon
so has part: feature:181097-181438:1:exon
so has part: feature:181675-181956:1:exon
so has part: feature:182045-182138:1:exon
so has part: feature:182631-182701:1:exon
so has part: feature:182769-182839:1:exon
so has part: feature:182912-184304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178873-179468:1:exon

position:179468:1
position: 179468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181097-181438:1:exon

position:181097:1
position: 181097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181438:1
position: 181438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181675-181956:1:exon

position:181675:1
position: 181675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181956:1
position: 181956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182045-182138:1:exon

position:182045:1
position: 182045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182138:1
position: 182138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182631-182701:1:exon

position:182631:1
position: 182631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182701:1
position: 182701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182769-182839:1:exon

position:182769:1
position: 182769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182839:1
position: 182839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:182912-184304:1:exon

position:182912:1
position: 182912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule
translation: MWGAACTPRLLHAAWLLALHAGLLAGVNITSPSALVRGTAGKAALLSVRYASASPDKPVVKWQLKRDKPVTVVQSIGTEIIGNLRPDYRDRIRVLENGSLLISPLQLADEGSYEVEVSITDDTFTGEKTINLTVDIPISKPQVLVASSTVLELSEFFTLNCSHENGTKPTYTWLKDGRPLNNDSRLLLSPDQKILTITRVLMADDDVYSCLVENPISQGRSVPVKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKPKQQAEPPPPDYTEQDEEHPKHEAETIPRGADHDRKTPLALYILKEQDTAAPQEDSSPPAGRSPGRGARRYHRSPAPARPPRSPPGSPARSRSAARLLRAAGVPAIREQEEGSALEISA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(179405..179468,181097..181438,181675..181956,182045..182138,182631..182701,182769..182839,182912..183130)
location: region:179405-183130:1
so has part: feature:179405-179468:1:exon
so has part: feature:181097-181438:1:exon
so has part: feature:181675-181956:1:exon
so has part: feature:182045-182138:1:exon
so has part: feature:182631-182701:1:exon
so has part: feature:182769-182839:1:exon
so has part: feature:182912-183130:1:exon

XP_015739590.1
type: Protein
SIO_000068: ncbiprotein

position:179405:1
position: 179405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183130:1
position: 183130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179405-179468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181097-181438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181675-181956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182045-182138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182631-182701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182769-182839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182912-183130:1:exon

ROBO4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184413..190128
location: region:184413-190128:1
so has part: feature:184413-190128:1:exon
subclass of: SO_0000010

107324247
type: Gene
SIO_000068: ncbigene

position:184413:1
position: 184413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190128:1
position: 190128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184413-190128:1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015884098.2
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(184413..184832,184919..185197,185265..185403,185479..185606,186061..186176,186251..186470,186540..186664,186926..187097,187178..187328,187408..187538,188089..188211,188287..188566,188676..190128)
location: region:184413-190128:1
so has part: feature:184413-184832:1:exon
so has part: feature:184919-185197:1:exon
so has part: feature:185265-185403:1:exon
so has part: feature:185479-185606:1:exon
so has part: feature:186061-186176:1:exon
so has part: feature:186251-186470:1:exon
so has part: feature:186540-186664:1:exon
so has part: feature:186926-187097:1:exon
so has part: feature:187178-187328:1:exon
so has part: feature:187408-187538:1:exon
so has part: feature:188089-188211:1:exon
so has part: feature:188287-188566:1:exon
so has part: feature:188676-190128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184413-184832:1:exon

position:184832:1
position: 184832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184919-185197:1:exon

position:184919:1
position: 184919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185197:1
position: 185197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185265-185403:1:exon

position:185265:1
position: 185265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185403:1
position: 185403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185479-185606:1:exon

position:185479:1
position: 185479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185606:1
position: 185606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186061-186176:1:exon

position:186061:1
position: 186061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186176:1
position: 186176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186251-186470:1:exon

position:186251:1
position: 186251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186470:1
position: 186470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:186540-186664:1:exon

position:186540:1
position: 186540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186664:1
position: 186664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:186926-187097:1:exon

position:186926:1
position: 186926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187097:1
position: 187097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:187178-187328:1:exon

position:187178:1
position: 187178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187328:1
position: 187328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:187408-187538:1:exon

position:187408:1
position: 187408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187538:1
position: 187538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:188089-188211:1:exon

position:188089:1
position: 188089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188211:1
position: 188211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:188287-188566:1:exon

position:188287:1
position: 188287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188566:1
position: 188566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:188676-190128:1:exon

position:188676:1
position: 188676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015884099.2
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(184413..184832,184919..185197,185265..185403,185479..185606,186061..186176,186251..186470,186543..186664,186926..187097,187178..187328,187408..187538,188089..188211,188287..188566,188676..190128)
location: region:184413-190128:1
so has part: feature:184413-184832:1:exon
so has part: feature:184919-185197:1:exon
so has part: feature:185265-185403:1:exon
so has part: feature:185479-185606:1:exon
so has part: feature:186061-186176:1:exon
so has part: feature:186251-186470:1:exon
so has part: feature:186543-186664:1:exon
so has part: feature:186926-187097:1:exon
so has part: feature:187178-187328:1:exon
so has part: feature:187408-187538:1:exon
so has part: feature:188089-188211:1:exon
so has part: feature:188287-188566:1:exon
so has part: feature:188676-190128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184413-184832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184919-185197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185265-185403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185479-185606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186061-186176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186251-186470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186543-186664:1:exon

position:186543:1
position: 186543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:186926-187097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187178-187328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:187408-187538:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188089-188211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188287-188566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188676-190128:1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X1
translation: MRAAMAGGWAMALGLGLWATALHLGGCHPPGGDVESHSTQRPAELRDNFRLQPGDLVVVAGQALELDCVPPAGQPEPKVTWRKDGVTLRLAGGRHQLSRGKLRVALARRSDAGVYVCVAANAAGERHSRGAHVTILEKPVIVRRPSDVTAVAGSTVELSCGAQGDPAPRVQWHKESGELPWGRHEVDQEHTLRLHAVTAADGGAYVCTAQSQLGSAAATARLRVEGQLPASWWEATWRNLLAVKLQLDNGTALPTNATVWLRWRMVTPGPAPEGYVVLYRCLLPTSTAWSQQDVGRKFNTIIPALQRGYQYEFKVRPYAGGTQGLDSNSWHLWIPEEAVPSAAPQHVTVGQAAPGNGTIIVSWEPPPPDAHNGIIRGYQVWSLGEGWLHPTNHTVDGGTRRLETLLHGSGARYCIQVAAFNGAGLGIPSNATCGILEMMAASTGVVQVLQQPAVIAATGSLLWLALLALLLLICQRRTSQDSMAQHGQENGDVPWLSSPWKPVCVPQNLSGSSSLSSRLLGSDSRDPQPSPLTSELPSLSPVTTPSCIHPCREHPKTSSSSLALWERIHKRELDRTHSSPVPVAGLRAMPVTLCGTEWGAHVDSAHRWPQQKGDDGDTTQAGEEPWWPPSVSSPKPRRSSLASVGAGMLVVPEGHPHAWHPTRTRFPAMGCSRDTSPVTGNTSDMSMVTRNHRDMSSVTRSPIDMSPATENRRNRLLTISPSRDVSPVTGCPRGRSPAIGHPKEKSPATRSPRDLSPASSQSLASTVQENMSSVTLHPRDTFPATRSPRDVFPAVRHPDEISMVPQSPRDTSVLPRQPRDVLMVPKDVSAEHGRLSPALSDGVLTPQRVAEDLERVQDALCPTNTPRPEVSPARPHSVPVPRPLSPPHTYGYICGPPTSEMGEGEEEEEEEEEESPKVWSHGDSPGGSLLNGWGSVSEDNVPSTRCSLASSSDGSFLLDASFARALAVAVDSLCFSLEDIDGGGEGAAAPLHCLASSPLCGEVTLGTGMGMGSPWARVGSQWGGLPSRDRRDRSVATPGL
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(184703..184832,184919..185197,185265..185403,185479..185606,186061..186176,186251..186470,186540..186664,186926..187097,187178..187328,187408..187538,188089..188211,188287..188566,188676..189804)
location: region:184703-189804:1
so has part: feature:184703-184832:1:exon
so has part: feature:184919-185197:1:exon
so has part: feature:185265-185403:1:exon
so has part: feature:185479-185606:1:exon
so has part: feature:186061-186176:1:exon
so has part: feature:186251-186470:1:exon
so has part: feature:186540-186664:1:exon
so has part: feature:186926-187097:1:exon
so has part: feature:187178-187328:1:exon
so has part: feature:187408-187538:1:exon
so has part: feature:188089-188211:1:exon
so has part: feature:188287-188566:1:exon
so has part: feature:188676-189804:1:exon

XP_015739584.1
type: Protein
SIO_000068: ncbiprotein

position:184703:1
position: 184703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189804:1
position: 189804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184703-184832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184919-185197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185265-185403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185479-185606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186061-186176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186251-186470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186540-186664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186926-187097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187178-187328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:187408-187538:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188089-188211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188287-188566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188676-189804:1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X2
translation: MRAAMAGGWAMALGLGLWATALHLGGCHPPGGDVESHSTQRPAELRDNFRLQPGDLVVVAGQALELDCVPPAGQPEPKVTWRKDGVTLRLAGGRHQLSRGKLRVALARRSDAGVYVCVAANAAGERHSRGAHVTILEKPVIVRRPSDVTAVAGSTVELSCGAQGDPAPRVQWHKESGELPWGRHEVDQEHTLRLHAVTAADGGAYVCTAQSQLGSAAATARLRVEGQLPASWWEATWRNLLAVKLQLDNGTALPTNATVWLRWRMVTPGPAPEGYVVLYRCLLPTSTAWSQQDVGRKFNTIIPALQRGYQYEFKVRPYAGGTQGLDSNSWHLWIPEEVPSAAPQHVTVGQAAPGNGTIIVSWEPPPPDAHNGIIRGYQVWSLGEGWLHPTNHTVDGGTRRLETLLHGSGARYCIQVAAFNGAGLGIPSNATCGILEMMAASTGVVQVLQQPAVIAATGSLLWLALLALLLLICQRRTSQDSMAQHGQENGDVPWLSSPWKPVCVPQNLSGSSSLSSRLLGSDSRDPQPSPLTSELPSLSPVTTPSCIHPCREHPKTSSSSLALWERIHKRELDRTHSSPVPVAGLRAMPVTLCGTEWGAHVDSAHRWPQQKGDDGDTTQAGEEPWWPPSVSSPKPRRSSLASVGAGMLVVPEGHPHAWHPTRTRFPAMGCSRDTSPVTGNTSDMSMVTRNHRDMSSVTRSPIDMSPATENRRNRLLTISPSRDVSPVTGCPRGRSPAIGHPKEKSPATRSPRDLSPASSQSLASTVQENMSSVTLHPRDTFPATRSPRDVFPAVRHPDEISMVPQSPRDTSVLPRQPRDVLMVPKDVSAEHGRLSPALSDGVLTPQRVAEDLERVQDALCPTNTPRPEVSPARPHSVPVPRPLSPPHTYGYICGPPTSEMGEGEEEEEEEEEESPKVWSHGDSPGGSLLNGWGSVSEDNVPSTRCSLASSSDGSFLLDASFARALAVAVDSLCFSLEDIDGGGEGAAAPLHCLASSPLCGEVTLGTGMGMGSPWARVGSQWGGLPSRDRRDRSVATPGL
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(184703..184832,184919..185197,185265..185403,185479..185606,186061..186176,186251..186470,186543..186664,186926..187097,187178..187328,187408..187538,188089..188211,188287..188566,188676..189804)
location: region:184703-189804:1
so has part: feature:184703-184832:1:exon
so has part: feature:184919-185197:1:exon
so has part: feature:185265-185403:1:exon
so has part: feature:185479-185606:1:exon
so has part: feature:186061-186176:1:exon
so has part: feature:186251-186470:1:exon
so has part: feature:186543-186664:1:exon
so has part: feature:186926-187097:1:exon
so has part: feature:187178-187328:1:exon
so has part: feature:187408-187538:1:exon
so has part: feature:188089-188211:1:exon
so has part: feature:188287-188566:1:exon
so has part: feature:188676-189804:1:exon

XP_015739585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184703-184832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184919-185197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185265-185403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185479-185606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186061-186176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186251-186470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186543-186664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186926-187097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187178-187328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:187408-187538:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188089-188211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188287-188566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188676-189804:1:exon

ROBO3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190067..198816)
location: region:190067-198816:-1
so has part: feature:190067-198816:-1:exon
subclass of: SO_0000010

107324246
type: Gene
SIO_000068: ncbigene

position:190067:-1
position: 190067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198816:-1
position: 198816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190067-198816:-1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ROBO3
product: roundabout guidance receptor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032449073.1
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(190067..190503,190572..190649,190730..190836,191401..191562,191629..191779,191852..192016,192089..192159,192227..192368,192438..192623,192722..192893,193366..193478,193554..193770,193844..193950,194034..194200,194280..194412,194530..194611,194817..195025,195101..195272,195344..195468,195704..195831,196124..196262,196333..196453,196524..196681,196878..197119))
location: region:190067-197119:-1
so has part: feature:196878-197119:-1:exon
so has part: feature:196524-196681:-1:exon
so has part: feature:196333-196453:-1:exon
so has part: feature:196124-196262:-1:exon
so has part: feature:195704-195831:-1:exon
so has part: feature:195344-195468:-1:exon
so has part: feature:195101-195272:-1:exon
so has part: feature:194817-195025:-1:exon
so has part: feature:194530-194611:-1:exon
so has part: feature:194280-194412:-1:exon
so has part: feature:194034-194200:-1:exon
so has part: feature:193844-193950:-1:exon
so has part: feature:193554-193770:-1:exon
so has part: feature:193366-193478:-1:exon
so has part: feature:192722-192893:-1:exon
so has part: feature:192438-192623:-1:exon
so has part: feature:192227-192368:-1:exon
so has part: feature:192089-192159:-1:exon
so has part: feature:191852-192016:-1:exon
so has part: feature:191629-191779:-1:exon
so has part: feature:191401-191562:-1:exon
so has part: feature:190730-190836:-1:exon
so has part: feature:190572-190649:-1:exon
so has part: feature:190067-190503:-1:exon

position:197119:-1
position: 197119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196878-197119:-1:exon

position:196878:-1
position: 196878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196524-196681:-1:exon

position:196524:-1
position: 196524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196681:-1
position: 196681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196333-196453:-1:exon

position:196333:-1
position: 196333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196453:-1
position: 196453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196124-196262:-1:exon

position:196124:-1
position: 196124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196262:-1
position: 196262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195704-195831:-1:exon

position:195704:-1
position: 195704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195831:-1
position: 195831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195344-195468:-1:exon

position:195344:-1
position: 195344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195468:-1
position: 195468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195101-195272:-1:exon

position:195101:-1
position: 195101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195272:-1
position: 195272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194817-195025:-1:exon

position:194817:-1
position: 194817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195025:-1
position: 195025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194530-194611:-1:exon

position:194530:-1
position: 194530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194611:-1
position: 194611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194280-194412:-1:exon

position:194280:-1
position: 194280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194412:-1
position: 194412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:194034-194200:-1:exon

position:194034:-1
position: 194034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194200:-1
position: 194200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193844-193950:-1:exon

position:193844:-1
position: 193844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193950:-1
position: 193950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:193554-193770:-1:exon

position:193554:-1
position: 193554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193770:-1
position: 193770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:193366-193478:-1:exon

position:193366:-1
position: 193366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193478:-1
position: 193478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:192722-192893:-1:exon

position:192722:-1
position: 192722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192893:-1
position: 192893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:192438-192623:-1:exon

position:192438:-1
position: 192438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192623:-1
position: 192623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:192227-192368:-1:exon

position:192227:-1
position: 192227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192368:-1
position: 192368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:192089-192159:-1:exon

position:192089:-1
position: 192089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192159:-1
position: 192159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:191852-192016:-1:exon

position:191852:-1
position: 191852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192016:-1
position: 192016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:191629-191779:-1:exon

position:191629:-1
position: 191629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191779:-1
position: 191779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:191401-191562:-1:exon

position:191401:-1
position: 191401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191562:-1
position: 191562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:190730-190836:-1:exon

position:190730:-1
position: 190730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190836:-1
position: 190836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:190572-190649:-1:exon

position:190572:-1
position: 190572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190649:-1
position: 190649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:190067-190503:-1:exon

position:190503:-1
position: 190503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 3 isoform X1
translation: MLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEATSRNASLEVAVLRDDFRQSPGDVVVAAGEPAVLECVPPRGHPEPTVSWKKDGARLSDKDERITIRGGKLMMATTRKSDAGIYVCVATNMVGERDSEPAELVVFERPAFGRRPQNQAVLEDQAAEFPCEALGDPPPTARWRREDGELPAGRWELLADNTLRISRVRAEDEGTYTCMAENSVGRSEASGTLIVRVPPQLITRPRNQTVSPGQSVTFQCETTGNPPPAVFWQKEGSQTLLFPGQSPPPAGRISVAPSGAMTITDVQPTDAGYYLCQAISVAGSVLAKALLEVQAVPAEPRAPVIRWGPANLTLLPVGATVQLPCWAEGEPPPQVGWLKDGSTVPGSERRTILLENGTLQISSLQVTDSGQYECVATSLMGEMRWSGSLQVQDPGILPGPPSTPVVTNVTKSSVTLTWKGSEQSGGTAVTYIVEAFSEAMGGPWRTVAANVEGETHTVQGLVPDTVYLFLVRALNAHGLSDPSGISEPIRTQEDTSPTTQVPPELARVAVHLQEPVVLPPGAVRLAWTVEPPSPSVQGYQVLYRRRGGRWEAWDVRAPGERGALLTGLRRGQDYEVKVRPFYMHLHGPDSAVRALRVPEAAPSAPPRAVSVAGNGTSVRISWQPPPPAEQNGVILDYRIWCLGNESRFHINQSVEGTVLATVLRGLVPGVPYRAEVAAATGAGVGARSAPISIRIAPPVEQDVGLVGWGSVAERMAAVARRPAFIAGVSGAVWLILAGFAAWLYSRRRRRKELSHFTASFAFAPTSASMGAVGPRHGPTASSLPPPALSTLTFPHTPAPAHSSPRNAHPWLADAWRAGGLDATERYYNEAGISRYIAQTEPFGNAEGPIYSSIEAGGEELRTFHRPCSQHGPETLYGHPAPGHGKNLGKAVQTPVLSWTELLPPPPSASELSQYTEEEEEMEEEEEMSKEKDGISGLEEHCPSTEDAPRHAASSPATPTGCWAPAATVPIPHEDTRSLQRFDSPHSPRRPPRGTAPSPSPPLSPRSPDTYKGPMPRSHRPHGSGKTRSETPKSHPKPKGGRYPREQWMGDLPPPPLPPPGETPSPSREPSGAERRAAHRPPRQGERGSGRGAKPRAVPPISAVPPRQETPSPTADPPSWLGAAPPPAAPLPAAPPAPVGAAQGAAPARTPWPPARRRRSDEAARGQRHRDGDTGMGLRGGLVHFCL
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(190091..190503,190572..190649,190730..190836,191401..191562,191629..191779,191852..192016,192089..192159,192227..192368,192438..192623,192722..192893,193366..193478,193554..193770,193844..193950,194034..194200,194280..194412,194530..194611,194817..195025,195101..195272,195344..195468,195704..195831,196124..196262,196333..196453,196524..196681,196878..197019))
location: region:190091-197019:-1
so has part: feature:196878-197019:-1:exon
so has part: feature:196524-196681:-1:exon
so has part: feature:196333-196453:-1:exon
so has part: feature:196124-196262:-1:exon
so has part: feature:195704-195831:-1:exon
so has part: feature:195344-195468:-1:exon
so has part: feature:195101-195272:-1:exon
so has part: feature:194817-195025:-1:exon
so has part: feature:194530-194611:-1:exon
so has part: feature:194280-194412:-1:exon
so has part: feature:194034-194200:-1:exon
so has part: feature:193844-193950:-1:exon
so has part: feature:193554-193770:-1:exon
so has part: feature:193366-193478:-1:exon
so has part: feature:192722-192893:-1:exon
so has part: feature:192438-192623:-1:exon
so has part: feature:192227-192368:-1:exon
so has part: feature:192089-192159:-1:exon
so has part: feature:191852-192016:-1:exon
so has part: feature:191629-191779:-1:exon
so has part: feature:191401-191562:-1:exon
so has part: feature:190730-190836:-1:exon
so has part: feature:190572-190649:-1:exon
so has part: feature:190091-190503:-1:exon

XP_032304964.1
type: Protein
SIO_000068: ncbiprotein

position:190091:-1
position: 190091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197019:-1
position: 197019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196878-197019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196524-196681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196333-196453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196124-196262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195704-195831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195344-195468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195101-195272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194817-195025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194530-194611:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194280-194412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194034-194200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193844-193950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193554-193770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193366-193478:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192722-192893:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192438-192623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192227-192368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192089-192159:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:191852-192016:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191629-191779:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191401-191562:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:190730-190836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190572-190649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190091-190503:-1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ROBO3
product: roundabout guidance receptor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015884097.2
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(190147..190330,190402..190503,190572..190649,190730..190836,191401..191562,191629..191779,191852..192016,192089..192159,192227..192368,192438..192623,192722..192893,193366..193478,193554..193770,193844..193950,194034..194200,194280..194445,194530..194611,194817..195025,195101..195272,195344..195468,195704..195831,196124..196262,196333..196453,196524..196681,196878..197204,198459..198816))
location: region:190147-198816:-1
so has part: feature:198459-198816:-1:exon
so has part: feature:196878-197204:-1:exon
so has part: feature:196524-196681:-1:exon
so has part: feature:196333-196453:-1:exon
so has part: feature:196124-196262:-1:exon
so has part: feature:195704-195831:-1:exon
so has part: feature:195344-195468:-1:exon
so has part: feature:195101-195272:-1:exon
so has part: feature:194817-195025:-1:exon
so has part: feature:194530-194611:-1:exon
so has part: feature:194280-194445:-1:exon
so has part: feature:194034-194200:-1:exon
so has part: feature:193844-193950:-1:exon
so has part: feature:193554-193770:-1:exon
so has part: feature:193366-193478:-1:exon
so has part: feature:192722-192893:-1:exon
so has part: feature:192438-192623:-1:exon
so has part: feature:192227-192368:-1:exon
so has part: feature:192089-192159:-1:exon
so has part: feature:191852-192016:-1:exon
so has part: feature:191629-191779:-1:exon
so has part: feature:191401-191562:-1:exon
so has part: feature:190730-190836:-1:exon
so has part: feature:190572-190649:-1:exon
so has part: feature:190402-190503:-1:exon
so has part: feature:190147-190330:-1:exon

position:190147:-1
position: 190147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198459-198816:-1:exon

position:198459:-1
position: 198459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196878-197204:-1:exon

position:197204:-1
position: 197204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196524-196681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196333-196453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196124-196262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195704-195831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195344-195468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195101-195272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194817-195025:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194530-194611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194280-194445:-1:exon

position:194445:-1
position: 194445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:194034-194200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193844-193950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193554-193770:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193366-193478:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192722-192893:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192438-192623:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192227-192368:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192089-192159:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191852-192016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191629-191779:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191401-191562:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190730-190836:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190572-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190402-190503:-1:exon

position:190402:-1
position: 190402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:190147-190330:-1:exon

position:190330:-1
position: 190330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 3 isoform X2
translation: MLRYLLKTLLQMNLFADSLAAEMSNSSELLLGINGSEAALDLRNLTAGNGSHPRLEDSAPRIVEHPSDLLVSRGEPATLSCRAEGRPSPTVEWYKDGERVETDHEDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEATSRNASLEVAVLRDDFRQSPGDVVVAAGEPAVLECVPPRGHPEPTVSWKKDGARLSDKDERITIRGGKLMMATTRKSDAGIYVCVATNMVGERDSEPAELVVFERPAFGRRPQNQAVLEDQAAEFPCEALGDPPPTARWRREDGELPAGRWELLADNTLRISRVRAEDEGTYTCMAENSVGRSEASGTLIVRVPPQLITRPRNQTVSPGQSVTFQCETTGNPPPAVFWQKEGSQTLLFPGQSPPPAGRISVAPSGAMTITDVQPTDAGYYLCQAISVAGSVLAKALLEVQAVPAEPRAPVIRWGPANLTLLPVGATVQLPCWAEGEPPPQVGWLKDGSTVPGSERRTILLENGTLQISSLQVTDSGQYECVATSLMGEMRWSGSLQVQGDGSHLSPPSPDPGILPGPPSTPVVTNVTKSSVTLTWKGSEQSGGTAVTYIVEAFSEAMGGPWRTVAANVEGETHTVQGLVPDTVYLFLVRALNAHGLSDPSGISEPIRTQEDTSPTTQVPPELARVAVHLQEPVVLPPGAVRLAWTVEPPSPSVQGYQVLYRRRGGRWEAWDVRAPGERGALLTGLRRGQDYEVKVRPFYMHLHGPDSAVRALRVPEAAPSAPPRAVSVAGNGTSVRISWQPPPPAEQNGVILDYRIWCLGNESRFHINQSVEGTVLATVLRGLVPGVPYRAEVAAATGAGVGARSAPISIRIAPPVEQDVGLVGWGSVAERMAAVARRPAFIAGVSGAVWLILAGFAAWLYSRRRRRKELSHFTASFAFAPTSASMGAVGPRHGPTASSLPPPALSTLTFPHTPAPAHSSPRNAHPWLADAWRAGGLDATERYYNEAGISRYIAQTEPFGNAEGPIYSSIEAGGEELRTFHRPCSQHGPETLYGHPAPGHGKNLGKAVQTPVLSWTELLPPPPSASELSQYTEEEEEMEEEEEMSKEKDGISGLEEHCPSTEDAPRHAASSPATPTGCWAPAATVPIPHEDTRSLQRFDSPHSPRRPPRGTAPSPSPPLSPRSPDTYKGPMPRSHRPHGSGKTRSETPKSHPKPKGGRYPREQWMGDLPPPPLPPPGETPSPSREPSGAERRAAHRPPRQGDAVPYSRPSFLARGCSTAGSASSCGSSGSRGRGSGRSPRPDPLAPRPPQEER
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(190170..190330,190402..190503,190572..190649,190730..190836,191401..191562,191629..191779,191852..192016,192089..192159,192227..192368,192438..192623,192722..192893,193366..193478,193554..193770,193844..193950,194034..194200,194280..194445,194530..194611,194817..195025,195101..195272,195344..195468,195704..195831,196124..196262,196333..196453,196524..196681,196878..197204,198459..198606))
location: region:190170-198606:-1
so has part: feature:198459-198606:-1:exon
so has part: feature:196878-197204:-1:exon
so has part: feature:196524-196681:-1:exon
so has part: feature:196333-196453:-1:exon
so has part: feature:196124-196262:-1:exon
so has part: feature:195704-195831:-1:exon
so has part: feature:195344-195468:-1:exon
so has part: feature:195101-195272:-1:exon
so has part: feature:194817-195025:-1:exon
so has part: feature:194530-194611:-1:exon
so has part: feature:194280-194445:-1:exon
so has part: feature:194034-194200:-1:exon
so has part: feature:193844-193950:-1:exon
so has part: feature:193554-193770:-1:exon
so has part: feature:193366-193478:-1:exon
so has part: feature:192722-192893:-1:exon
so has part: feature:192438-192623:-1:exon
so has part: feature:192227-192368:-1:exon
so has part: feature:192089-192159:-1:exon
so has part: feature:191852-192016:-1:exon
so has part: feature:191629-191779:-1:exon
so has part: feature:191401-191562:-1:exon
so has part: feature:190730-190836:-1:exon
so has part: feature:190572-190649:-1:exon
so has part: feature:190402-190503:-1:exon
so has part: feature:190170-190330:-1:exon

XP_015739583.1
type: Protein
SIO_000068: ncbiprotein

position:190170:-1
position: 190170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198606:-1
position: 198606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198459-198606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196878-197204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196524-196681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196333-196453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196124-196262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195704-195831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195344-195468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195101-195272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194817-195025:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194530-194611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194280-194445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194034-194200:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193844-193950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193554-193770:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193366-193478:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192722-192893:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192438-192623:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192227-192368:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192089-192159:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191852-192016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191629-191779:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191401-191562:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190730-190836:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190572-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190402-190503:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:190170-190330:-1:exon

MSANTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205325..220101
location: region:205325-220101:1
so has part: feature:205325-220101:1:exon
subclass of: SO_0000010

107324275
type: Gene
SIO_000068: ncbigene

position:205325:1
position: 205325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220101:1
position: 220101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205325-220101:1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001559463.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(205325..205853,209552..210299,210391..210513,213166..213277)
location: region:205325-213277:1
so has part: feature:205325-205853:1:exon
so has part: feature:209552-210299:1:exon
so has part: feature:210391-210513:1:exon
so has part: feature:213166-213277:1:exon

position:213277:1
position: 213277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205325-205853:1:exon

position:205853:1
position: 205853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209552-210299:1:exon

position:209552:1
position: 209552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210299:1
position: 210299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210391-210513:1:exon

position:210391:1
position: 210391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210513:1
position: 210513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213166-213277:1:exon

position:213166:1
position: 213166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001559464.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(205325..205853,210391..210513,213166..213277)
location: region:205325-213277:1
so has part: feature:205325-205853:1:exon
so has part: feature:210391-210513:1:exon
so has part: feature:213166-213277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205325-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210391-210513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213277:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032449084.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205325..205853,209552..210384)
location: region:205325-210384:1
so has part: feature:205325-205853:1:exon
so has part: feature:209552-210384:1:exon

position:210384:1
position: 210384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205325-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209552-210384:1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001559461.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(205327..205853,212539..212583,213166..213424,214316..214376,214584..215270,218399..218512)
location: region:205327-218512:1
so has part: feature:205327-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214584-215270:1:exon
so has part: feature:218399-218512:1:exon

position:205327:1
position: 205327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218512:1
position: 218512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205327-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

position:212539:1
position: 212539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212583:1
position: 212583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

position:213424:1
position: 213424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

position:214316:1
position: 214316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214376:1
position: 214376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214584-215270:1:exon

position:214584:1
position: 214584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215270:1
position: 215270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218399-218512:1:exon

position:218399:1
position: 218399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004309578.1
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(205327..205853,212539..212583,213166..213424,214316..214376,214584..218060,218399..218507)
location: region:205327-218507:1
so has part: feature:205327-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214584-218060:1:exon
so has part: feature:218399-218507:1:exon

position:218507:1
position: 218507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205327-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214584-218060:1:exon

position:218060:1
position: 218060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218399-218507:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015884163.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205327..205853,212539..212583,213166..213424,214316..214376,214584..214781,215080..216162)
location: region:205327-216162:1
so has part: feature:205327-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214584-214781:1:exon
so has part: feature:215080-216162:1:exon

position:216162:1
position: 216162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205327-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214584-214781:1:exon

position:214781:1
position: 214781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215080-216162:1:exon

position:215080:1
position: 215080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015884168.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205327..205853,212539..212583,213166..213424,214316..214376,215080..216162)
location: region:205327-216162:1
so has part: feature:205327-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:215080-216162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205327-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215080-216162:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015884167.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205327..205853,212539..212583,213166..213424,214316..214376,214525..214742)
location: region:205327-214742:1
so has part: feature:205327-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214525-214742:1:exon

position:214742:1
position: 214742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205327-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214525-214742:1:exon

position:214525:1
position: 214525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015884158.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205335..205853,212539..212583,213166..213424,214316..214376,218399..220101)
location: region:205335-220101:1
so has part: feature:205335-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

position:205335:1
position: 205335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205335-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015884160.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205335..205853,212542..212583,213166..213424,214316..214376,218399..220101)
location: region:205335-220101:1
so has part: feature:205335-205853:1:exon
so has part: feature:212542-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205335-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212542-212583:1:exon

position:212542:1
position: 212542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_015884161.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205336..205853,213166..213424,214316..214376,218399..220101)
location: region:205336-220101:1
so has part: feature:205336-205853:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

position:205336:1
position: 205336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205336-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X1
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,212539..212583,213166..213424,214316..214376,218399..219251)
location: region:205374-219251:1
so has part: feature:205374-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739644.1
type: Protein
SIO_000068: ncbiprotein

position:205374:1
position: 205374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219251:1
position: 219251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X2
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,212542..212583,213166..213424,214316..214376,218399..219251)
location: region:205374-219251:1
so has part: feature:205374-205853:1:exon
so has part: feature:212542-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212542-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X3
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,213166..213424,214316..214376,218399..219251)
location: region:205374-219251:1
so has part: feature:205374-205853:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X4
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAHKQNDSPHECKDLTCGSDPHQDCLGCVWAACGYHGMSPGSRSCLKSVFSICLKLPKFCPFGYKEKNRADL
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,212539..212583,213166..213424,214316..214376,214584..214781,215080..215092)
location: region:205374-215092:1
so has part: feature:205374-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214584-214781:1:exon
so has part: feature:215080-215092:1:exon

XP_015739649.1
type: Protein
SIO_000068: ncbiprotein

position:215092:1
position: 215092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214584-214781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215080-215092:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X7
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQADL
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,212539..212583,213166..213424,214316..214376,215080..215092)
location: region:205374-215092:1
so has part: feature:205374-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:215080-215092:1:exon

XP_015739654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215080-215092:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X6
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAHYLRTFEKLHNFVLSWLHHTANKTTHHMNART
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,212539..212583,213166..213424,214316..214376,214525..214621)
location: region:205374-214621:1
so has part: feature:205374-205853:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:214525-214621:1:exon

XP_015739653.1
type: Protein
SIO_000068: ncbiprotein

position:214621:1
position: 214621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214525-214621:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X8
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAVLGARGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKAELLVPVTPPSAMCTGSVQVTS
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205374..205853,209552..209620)
location: region:205374-209620:1
so has part: feature:205374-205853:1:exon
so has part: feature:209552-209620:1:exon

XP_032304975.1
type: Protein
SIO_000068: ncbiprotein

position:209620:1
position: 209620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205374-205853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209552-209620:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015884165.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205946..209744,210180..210299,210391..210513,213166..213424,214316..214376,218399..220101)
location: region:205946-220101:1
so has part: feature:205946-209744:1:exon
so has part: feature:210180-210299:1:exon
so has part: feature:210391-210513:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

position:205946:1
position: 205946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205946-209744:1:exon

position:209744:1
position: 209744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210180-210299:1:exon

position:210180:1
position: 210180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210391-210513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015884166.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205946..209744,210391..210513,213166..213424,214316..214376,218399..220101)
location: region:205946-220101:1
so has part: feature:205946-209744:1:exon
so has part: feature:210391-210513:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205946-209744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210391-210513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015884164.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(205946..209442,209552..210299,210391..210513,213166..213424,214316..214376,218399..220101)
location: region:205946-220101:1
so has part: feature:205946-209442:1:exon
so has part: feature:209552-210299:1:exon
so has part: feature:210391-210513:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205946-209442:1:exon

position:209442:1
position: 209442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209552-210299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210391-210513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015884169.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(210409..210513,212539..212583,213166..213424,214316..214376,218399..220101)
location: region:210409-220101:1
so has part: feature:210409-210513:1:exon
so has part: feature:212539-212583:1:exon
so has part: feature:213166-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-220101:1:exon

position:210409:1
position: 210409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210409-210513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212539-212583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213166-213424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218399-220101:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X5
translation: MEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(213346..213424,214316..214376,218399..219251)
location: region:213346-219251:1
so has part: feature:213346-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739650.1
type: Protein
SIO_000068: ncbiprotein

position:213346:1
position: 213346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213346-213424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X5
translation: MEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(213346..213424,214316..214376,218399..219251)
location: region:213346-219251:1
so has part: feature:213346-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213346-213424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X5
translation: MEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(213346..213424,214316..214376,218399..219251)
location: region:213346-219251:1
so has part: feature:213346-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213346-213424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218399-219251:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X5
translation: MEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLAEPRGPDASNETPGELEAPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(213346..213424,214316..214376,218399..219251)
location: region:213346-219251:1
so has part: feature:213346-213424:1:exon
so has part: feature:214316-214376:1:exon
so has part: feature:218399-219251:1:exon

XP_015739655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213346-213424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214316-214376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218399-219251:1:exon

ESAM
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220608..227279
location: region:220608-227279:1
so has part: feature:220608-227279:1:exon
subclass of: SO_0000010

107324300
type: Gene
SIO_000068: ncbigene

position:220608:1
position: 220608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227279:1
position: 227279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220608-227279:1:exon

ESAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ESAM
product: endothelial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_015884228.2
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(220608..220689,224870..225027,225526..225739,225814..225969,226215..226337,226430..226568,226828..227279)
location: region:220608-227279:1
so has part: feature:220608-220689:1:exon
so has part: feature:224870-225027:1:exon
so has part: feature:225526-225739:1:exon
so has part: feature:225814-225969:1:exon
so has part: feature:226215-226337:1:exon
so has part: feature:226430-226568:1:exon
so has part: feature:226828-227279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220608-220689:1:exon

position:220689:1
position: 220689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224870-225027:1:exon

position:224870:1
position: 224870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225027:1
position: 225027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225526-225739:1:exon

position:225526:1
position: 225526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225739:1
position: 225739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225814-225969:1:exon

position:225814:1
position: 225814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225969:1
position: 225969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226215-226337:1:exon

position:226215:1
position: 226215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226337:1
position: 226337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226430-226568:1:exon

position:226430:1
position: 226430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226568:1
position: 226568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:226828-227279:1:exon

position:226828:1
position: 226828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ESAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-selective adhesion molecule
translation: MVALPPGALLLCALLGVCSAVLEVHVGTGSVYSVEGEGAVLPAWYTSSSQKKPYISWILKKGADEHFQILTYLDGEVKVEETELKPRVGFVHPVLSHNISLFINATREHDSGQYICSVNVVDDIINPIRNVAIINLTVLVPPAPPVCRLKGSPTVGANVTLSCASQKGKPSPLYRWQRQEPTKQVFFPPAQDRARGTLKLTNLSLDMSGLYECEAENRAGSAKCSIILEVHSTSEGAVIAGAVLGSVGALATVAFFAQRLLGYRRKKRDGQEEMANEIKEDAVAPKTPTWTRTRPADTISKTSTLSSIVGSRDRPYGASPPSYTASVLTAAGSYQGPPRAGANPPATNGAPWRPPQPVTPPAGLTPSSLARAGAVPVMVPAQSRAGSLV
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(220644..220689,224870..225027,225526..225739,225814..225969,226215..226337,226430..226568,226828..227161)
location: region:220644-227161:1
so has part: feature:220644-220689:1:exon
so has part: feature:224870-225027:1:exon
so has part: feature:225526-225739:1:exon
so has part: feature:225814-225969:1:exon
so has part: feature:226215-226337:1:exon
so has part: feature:226430-226568:1:exon
so has part: feature:226828-227161:1:exon

XP_015739714.1
type: Protein
SIO_000068: ncbiprotein

position:220644:1
position: 220644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227161:1
position: 227161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220644-220689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224870-225027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225526-225739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225814-225969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226215-226337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226430-226568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226828-227161:1:exon

NRGN
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227943..231404)
location: region:227943-231404:-1
so has part: feature:227943-231404:-1:exon
subclass of: SO_0000010

107324301
type: Gene
SIO_000068: ncbigene

position:227943:-1
position: 227943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231404:-1
position: 231404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227943-231404:-1:exon

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NRGN
product: neurogranin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_015884229.2
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: complement(join(227943..228090,229462..229668,231119..231404))
location: region:227943-231404:-1
so has part: feature:231119-231404:-1:exon
so has part: feature:229462-229668:-1:exon
so has part: feature:227943-228090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231119-231404:-1:exon

position:231119:-1
position: 231119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229462-229668:-1:exon

position:229462:-1
position: 229462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229668:-1
position: 229668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227943-228090:-1:exon

position:228090:-1
position: 228090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDILDIPLDDPDANAAAAKIQASFRGHMTRKKIKGGEMDRKAKDAECANSTRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: complement(join(229462..229668,231119..231133))
location: region:229462-231133:-1
so has part: feature:231119-231133:-1:exon
so has part: feature:229462-229668:-1:exon

XP_015739715.1
type: Protein
SIO_000068: ncbiprotein

position:231133:-1
position: 231133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231119-231133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229462-229668:-1:exon

SPA17
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234060..235374)
location: region:234060-235374:-1
so has part: feature:234060-235374:-1:exon
subclass of: SO_0000010

107324281
type: Gene
SIO_000068: ncbigene

position:234060:-1
position: 234060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235374:-1
position: 235374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234060-235374:-1:exon

SPA17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SPA17
product: sperm autoantigenic protein 17
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_015884179.2
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(234060..234374,234553..234620,234739..234897,235270..235374))
location: region:234060-235374:-1
so has part: feature:235270-235374:-1:exon
so has part: feature:234739-234897:-1:exon
so has part: feature:234553-234620:-1:exon
so has part: feature:234060-234374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235270-235374:-1:exon

position:235270:-1
position: 235270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234739-234897:-1:exon

position:234739:-1
position: 234739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234897:-1
position: 234897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234553-234620:-1:exon

position:234553:-1
position: 234553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234620:-1
position: 234620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234060-234374:-1:exon

position:234374:-1
position: 234374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPA17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SPA17
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sperm surface protein Sp17
translation: MSFPDPRTSLRLPSGFEEILYAMAREVLRAQPDDVLGFITRYFQALLAERERNSAARRTGQNEVPPSGAVMEQQEAATKIQAAFRGYSTRKDLRGVRRAHSDPPXPSVGPPGLPVTGTAPAGRGPSGRLVLHLETS
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(234187..234374,234553..234620,234739..234892))
location: region:234187-234892:-1
so has part: feature:234739-234892:-1:exon
so has part: feature:234553-234620:-1:exon
so has part: feature:234187-234374:-1:exon

XP_015739665.1
type: Protein
SIO_000068: ncbiprotein

position:234187:-1
position: 234187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234892:-1
position: 234892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234739-234892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234553-234620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234187-234374:-1:exon

PANX3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(235470..239444)
location: region:235470-239444:-1
so has part: feature:235470-239444:-1:exon
subclass of: SO_0000010

107324278
type: Gene
SIO_000068: ncbigene

position:235470:-1
position: 235470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239444:-1
position: 239444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235470-239444:-1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PANX3
product: pannexin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_015884175.2
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(235470..235571,236404..237047,237172..237386,237552..237694,238108..239444))
location: region:235470-239444:-1
so has part: feature:238108-239444:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:236404-237047:-1:exon
so has part: feature:235470-235571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238108-239444:-1:exon

position:238108:-1
position: 238108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

position:237552:-1
position: 237552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237694:-1
position: 237694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

position:237172:-1
position: 237172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237386:-1
position: 237386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236404-237047:-1:exon

position:236404:-1
position: 236404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237047:-1
position: 237047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235470-235571:-1:exon

position:235571:-1
position: 235571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PANX3
product: pannexin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015884176.2
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(235470..236194,236400..237047,237172..237386,237552..237694,238108..239444))
location: region:235470-239444:-1
so has part: feature:238108-239444:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:236400-237047:-1:exon
so has part: feature:235470-236194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238108-239444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236400-237047:-1:exon

position:236400:-1
position: 236400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235470-236194:-1:exon

position:236194:-1
position: 236194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PANX3
product: pannexin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_015884174.2
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(235470..237047,237172..237386,237552..237694,238108..239444))
location: region:235470-239444:-1
so has part: feature:238108-239444:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:235470-237047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238108-239444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235470-237047:-1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X2
translation: MSLSHTAAEYMLSDALLPDPSSSRAKGLRLELPSDRVLKFVAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWVLKVFPYSLLVVAVLMYLPYLLWRYAAAPTLHSDLLFIIDELDKSYNRSVRLVQHMRKVQQESDDSEQFWEEYERARRERYFEFPLLERYLACKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPQLIPCKLVFFSIFQLISLTVGGVYVLLMPVVIFSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPINDLNVILLFLRANISELTSFSRLNAVSALREAAAEKQDIDTVVDFMTLLAGLEATKPKHQACVPPANGEAIEMKEVEDKDDAAPDS
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(235525..235571,236404..237047,237172..237386,237552..237694,238108..238288))
location: region:235525-238288:-1
so has part: feature:238108-238288:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:236404-237047:-1:exon
so has part: feature:235525-235571:-1:exon

XP_015739661.1
type: Protein
SIO_000068: ncbiprotein

position:235525:-1
position: 235525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238288:-1
position: 238288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238108-238288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236404-237047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235525-235571:-1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X3
translation: MSLSHTAAEYMLSDALLPDPSSSRAKGLRLELPSDRVLKFVAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWVLKVFPYSLLVVAVLMYLPYLLWRYAAAPTLHSDLLFIIDELDKSYNRSVRLVQHMRKVQQESDDSEQFWEEYERARRERYFEFPLLERYLACKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPQLIPCKLVFFSIFQLISLTVGGVYVLLMPVVIFSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPINDLNVILLFLRANISELTSFSRLNAVSALREAAAEKQDIDTVVDFMTLLAGLEATKPKHQACVPPANGEAIGRVCAGSQGRDAATSPCVGRSCYRNSSAEKVAELKAQTQTRG
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(236071..236194,236400..237047,237172..237386,237552..237694,238108..238288))
location: region:236071-238288:-1
so has part: feature:238108-238288:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:236400-237047:-1:exon
so has part: feature:236071-236194:-1:exon

XP_015739662.1
type: Protein
SIO_000068: ncbiprotein

position:236071:-1
position: 236071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238108-238288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236400-237047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236071-236194:-1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X1
translation: MSLSHTAAEYMLSDALLPDPSSSRAKGLRLELPSDRVLKFVAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWVLKVFPYSLLVVAVLMYLPYLLWRYAAAPTLHSDLLFIIDELDKSYNRSVRLVQHMRKVQQESDDSEQFWEEYERARRERYFEFPLLERYLACKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPQLIPCKLVFFSIFQLISLTVGGVYVLLMPVVIFSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPINDLNVILLFLRANISELTSFSRLNAVSALREAAAEKQDIDTVVDFMTLLAGLEATKPKHQACVPPANGEAIGRFLGVSGVEMTSLLSFQRPNCCTPPWG
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(236318..237047,237172..237386,237552..237694,238108..238288))
location: region:236318-238288:-1
so has part: feature:238108-238288:-1:exon
so has part: feature:237552-237694:-1:exon
so has part: feature:237172-237386:-1:exon
so has part: feature:236318-237047:-1:exon

XP_015739660.1
type: Protein
SIO_000068: ncbiprotein

position:236318:-1
position: 236318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238108-238288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237552-237694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237172-237386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236318-237047:-1:exon

RPUSD4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(239454..241955)
location: region:239454-241955:-1
so has part: feature:239454-241955:-1:exon
subclass of: SO_0000010

107324279
type: Gene
SIO_000068: ncbigene

position:239454:-1
position: 239454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241955:-1
position: 241955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239454-241955:-1:exon

RPUSD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: RPUSD4
product: RNA pseudouridine synthase D4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_015884177.2
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: complement(join(239454..239988,240149..240246,240522..240672,240750..240843,241336..241537,241628..241955))
location: region:239454-241955:-1
so has part: feature:241628-241955:-1:exon
so has part: feature:241336-241537:-1:exon
so has part: feature:240750-240843:-1:exon
so has part: feature:240522-240672:-1:exon
so has part: feature:240149-240246:-1:exon
so has part: feature:239454-239988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241628-241955:-1:exon

position:241628:-1
position: 241628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241336-241537:-1:exon

position:241336:-1
position: 241336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241537:-1
position: 241537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240750-240843:-1:exon

position:240750:-1
position: 240750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240843:-1
position: 240843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240522-240672:-1:exon

position:240522:-1
position: 240522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240672:-1
position: 240672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240149-240246:-1:exon

position:240149:-1
position: 240149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240246:-1
position: 240246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239454-239988:-1:exon

position:239988:-1
position: 239988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPUSD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4
translation: MAALSARLWRRGEALGRRAMAAVRAQELAERVRAERDGKDNKDKEQQRVCAERGRARQLLALQRVHHNVLAKALLQRAVHRDSEMVVLNKPYGLPVHGGPGVKNCIADVLPIMAKMLRDTRAEPLQLCHRLDKETTGLMVLARSRDAADRIRLLFKTRQVEKIYWAICVGNPDPAEGIVEIPMVEREVQSHQPHYKMTLAPNYRVSPEDGKVVKIRKNRSAESAVTQYRVLATSSACSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYSHWSKLAPQKLPEITLKRLKLQQSKSRHLPLHLHAYRLSLPLGTNGSKQIDLVCEPPSFFHRTLRKLELDIDKE
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: complement(join(239791..239988,240149..240246,240522..240672,240750..240843,241336..241537,241628..241919))
location: region:239791-241919:-1
so has part: feature:241628-241919:-1:exon
so has part: feature:241336-241537:-1:exon
so has part: feature:240750-240843:-1:exon
so has part: feature:240522-240672:-1:exon
so has part: feature:240149-240246:-1:exon
so has part: feature:239791-239988:-1:exon

XP_015739663.1
type: Protein
SIO_000068: ncbiprotein

position:239791:-1
position: 239791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241919:-1
position: 241919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241628-241919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241336-241537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240750-240843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240522-240672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240149-240246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239791-239988:-1:exon

PUS3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242462..247261)
location: region:242462-247261:-1
so has part: feature:242462-247261:-1:exon
subclass of: SO_0000010

107324277
type: Gene
SIO_000068: ncbigene

position:242462:-1
position: 242462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247261:-1
position: 247261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242462-247261:-1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PUS3
product: pseudouridine synthase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_015884171.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(242462..242774,243302..243492,243782..244350,244939..246279))
location: region:242462-246279:-1
so has part: feature:244939-246279:-1:exon
so has part: feature:243782-244350:-1:exon
so has part: feature:243302-243492:-1:exon
so has part: feature:242462-242774:-1:exon

position:246279:-1
position: 246279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244939-246279:-1:exon

position:244939:-1
position: 244939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243782-244350:-1:exon

position:243782:-1
position: 243782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244350:-1
position: 244350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243302-243492:-1:exon

position:243302:-1
position: 243302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243492:-1
position: 243492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242462-242774:-1:exon

position:242774:-1
position: 242774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PUS3
product: pseudouridine synthase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_015884173.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(242542..242774,243302..243492,243782..244350,244939..245353,247171..247261))
location: region:242542-247261:-1
so has part: feature:247171-247261:-1:exon
so has part: feature:244939-245353:-1:exon
so has part: feature:243782-244350:-1:exon
so has part: feature:243302-243492:-1:exon
so has part: feature:242542-242774:-1:exon

position:242542:-1
position: 242542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247171-247261:-1:exon

position:247171:-1
position: 247171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:244939-245353:-1:exon

position:245353:-1
position: 245353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243782-244350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243302-243492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242542-242774:-1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X1
translation: MLLRQKQVETQISSFLCRPGGAASHQLTMANGSWATDREQLLRRVQDLEEQVKQLQEKLSEGREGTAAKDTPPTSRKSKKQQRPFDFSAHGRRHVALRIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVISLDLRSNLSEEKKLNGSTGDSEGRSSKSEEEIRYTHILNRVLPPDIRVLAWAPVEPDFSARFSCLKRTYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVTWVDGGDEGDPRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMEGPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWHYDREVQEFNVTHLQQLWASYAIKTQVLHSMLQGLDAAPVAAGKDPADAVPVPWGSLQPPVLSQAGSLMEGGRARTYKPLLERPRCEGLESRIQLSLRRGRGRAERAAKRLRTGERPGGSS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(242542..242774,243302..243492,243782..244350,244939..245406))
location: region:242542-245406:-1
so has part: feature:244939-245406:-1:exon
so has part: feature:243782-244350:-1:exon
so has part: feature:243302-243492:-1:exon
so has part: feature:242542-242774:-1:exon

XP_015739657.1
type: Protein
SIO_000068: ncbiprotein

position:245406:-1
position: 245406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244939-245406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243782-244350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243302-243492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242542-242774:-1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X2
translation: MANGSWATDREQLLRRVQDLEEQVKQLQEKLSEGREGTAAKDTPPTSRKSKKQQRPFDFSAHGRRHVALRIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVISLDLRSNLSEEKKLNGSTGDSEGRSSKSEEEIRYTHILNRVLPPDIRVLAWAPVEPDFSARFSCLKRTYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVTWVDGGDEGDPRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMEGPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWHYDREVQEFNVTHLQQLWASYAIKTQVLHSMLQGLDAAPVAAGKDPADAVPVPWGSLQPPVLSQAGSLMEGGRARTYKPLLERPRCEGLESRIQLSLRRGRGRAERAAKRLRTGERPGGSS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(242542..242774,243302..243492,243782..244350,244939..245322))
location: region:242542-245322:-1
so has part: feature:244939-245322:-1:exon
so has part: feature:243782-244350:-1:exon
so has part: feature:243302-243492:-1:exon
so has part: feature:242542-242774:-1:exon

XP_015739659.1
type: Protein
SIO_000068: ncbiprotein

position:245322:-1
position: 245322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244939-245322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243782-244350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243302-243492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242542-242774:-1:exon

HYLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 246280..247155
location: region:246280-247155:1
so has part: feature:246280-247155:1:exon
subclass of: SO_0000010

107324280
type: Gene
SIO_000068: ncbigene

position:246280:1
position: 246280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247155:1
position: 247155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246280-247155:1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015884178.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 246280..247155
location: region:246280-247155:1
so has part: feature:246280-247155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246280-247155:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MDGLGAAGHVCAALSDEELEGGSEIHGADGAAGPSAVLCCSEGSRSRVMKRKVLRHRPDGGVEVCDESLSSVLQTMATWRLTQQVLGAADPCDGDTGLGGFYRPDPPPRLQRATRDSPPLLLRVLQNRSPLSSPSAAPAPQPKSFIPPRLDALLQSRHKTDRVAKYLQYKRDWERFPVPGQAPRHELRCCVRCRLGPELHNPPGRAARYRPNGYTAPSDKKRAALTWGVRCDLASGIVPRKSTSLL
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 246303..247043
location: region:246303-247043:1
so has part: feature:246303-247043:1:exon

XP_015739664.1
type: Protein
SIO_000068: ncbiprotein

position:246303:1
position: 246303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247043:1
position: 247043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246303-247043:1:exon

VSIG10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 247711..252206
location: region:247711-252206:1
so has part: feature:247711-252206:1:exon
subclass of: SO_0000010

107324221
type: Gene
SIO_000068: ncbigene

position:247711:1
position: 247711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252206:1
position: 252206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247711-252206:1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015884047.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(247711..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250798,250869..251171,251474..251596,251671..251695,251773..251888,251965..252206)
location: region:247711-252206:1
so has part: feature:247711-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250798:1:exon
so has part: feature:250869-251171:1:exon
so has part: feature:251474-251596:1:exon
so has part: feature:251671-251695:1:exon
so has part: feature:251773-251888:1:exon
so has part: feature:251965-252206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247711-248227:1:exon

position:248227:1
position: 248227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

position:248302:1
position: 248302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248649:1
position: 248649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

position:249025:1
position: 249025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249309:1
position: 249309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

position:249384:1
position: 249384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249659:1
position: 249659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

position:249785:1
position: 249785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250072:1
position: 250072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250798:1:exon

position:250160:1
position: 250160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250798:1
position: 250798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:250869-251171:1:exon

position:250869:1
position: 250869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251171:1
position: 251171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:251474-251596:1:exon

position:251474:1
position: 251474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251596:1
position: 251596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:251671-251695:1:exon

position:251671:1
position: 251671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251695:1
position: 251695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251773-251888:1:exon

position:251773:1
position: 251773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251888:1
position: 251888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:251965-252206:1:exon

position:251965:1
position: 251965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015884049.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(247711..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250420,250505..250798,250869..251171,251474..251596,251671..251695,251773..251888,251965..252206)
location: region:247711-252206:1
so has part: feature:247711-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250420:1:exon
so has part: feature:250505-250798:1:exon
so has part: feature:250869-251171:1:exon
so has part: feature:251474-251596:1:exon
so has part: feature:251671-251695:1:exon
so has part: feature:251773-251888:1:exon
so has part: feature:251965-252206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247711-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250420:1:exon

position:250420:1
position: 250420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:250505-250798:1:exon

position:250505:1
position: 250505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250869-251171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251474-251596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251671-251695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251773-251888:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251965-252206:1:exon

VSIG10L2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001559454.1
SIO_010081: VSIG10L2
so part of: VSIG10L2
location: join(247711..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250798,250869..251596,251671..251695)
location: region:247711-251695:1
so has part: feature:247711-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250798:1:exon
so has part: feature:250869-251596:1:exon
so has part: feature:251671-251695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247711-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250869-251596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251671-251695:1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015884048.2
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(247711..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250798,250869..251626)
location: region:247711-251626:1
so has part: feature:247711-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250798:1:exon
so has part: feature:250869-251626:1:exon

position:251626:1
position: 251626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247711-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250869-251626:1:exon

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2 isoform X1
translation: MWRWGVPWPLWLLPLVAAGQALDAGTAAYEERTVTGIRGRAVELSCGSAAPAVVFWSFTALGSAGPPRAVAVGSGAEAAVAPGAGALGRVTLRNGTLELRELRGNAAGRFLCQGLFPEWGRLRVGYAAVMLRVLVPVSKPFVRLTAAAAAEGTEVALTCTVREGTAPLGFSWQHREPHGRLLAAPVGMGGSGAELLLAPANRSHAGWYSCTARNEVNNRTSEPVYLDIVYGPDEPAISVEPFSPEQGSFSAGEREDVVLSCLAPSNPPSRYIWLHNGSQVHIGQTFVMSAIARGQAGTYTCLAENTHLQTRTQATIVLTVYYPPAGSPSCSALPSADLRDVALRCRWVGGFPAARLRWVGPGEEEQELEEDEEGAAGPSFSMATSIVPGAATRNGSSFTCVATHPALREGAACRTTLWIPAGGPTCAAAATKRDEFVMLRCRWEGGEPPATLRWWDGQGRALGTPTTSTTVLVLSTETQLRGRDFVCVAAHPLRAASTECRLRLGKGGTAPCAAPAIAVPRWDAGINPPPRADVPELEVERSEVAVLEGGEARLACRHRGGTELGAELGWFDPQQREVPGSSTKYRLERGGAWANLTVRDAEWPRDGGSYRCSAANSVGTNSLRVQLRVERYPAPPNVTISKLRYTRARTEVRLQWRTQGAGNLTGFVVQRRPAKKPQRRTGGTWETAAGDIEPSSRDRRLGGLDPRVVYAFRVLAVNHRTAGHPSEVQTPAEPPFEALPAVMGAAVLGMLVAASMSLLAVYLIARHRDRLPRLHELLFRMAGPDAPQLAEDVNVAVSIEDGEGQGQEEPGGPSTAAMEEEPRSAPPGDPADDAPVDVTITGTALP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(248173..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250798,250869..251171,251474..251596,251671..251695,251773..251888,251965..252047)
location: region:248173-252047:1
so has part: feature:248173-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250798:1:exon
so has part: feature:250869-251171:1:exon
so has part: feature:251474-251596:1:exon
so has part: feature:251671-251695:1:exon
so has part: feature:251773-251888:1:exon
so has part: feature:251965-252047:1:exon

XP_015739533.1
type: Protein
SIO_000068: ncbiprotein

position:248173:1
position: 248173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252047:1
position: 252047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248173-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250869-251171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251474-251596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251671-251695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251773-251888:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251965-252047:1:exon

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2 isoform X3
translation: MWRWGVPWPLWLLPLVAAGQALDAGTAAYEERTVTGIRGRAVELSCGSAAPAVVFWSFTALGSAGPPRAVAVGSGAEAAVAPGAGALGRVTLRNGTLELRELRGNAAGRFLCQGLFPEWGRLRVGYAAVMLRVLVPVSKPFVRLTAAAAAEGTEVALTCTVREGTAPLGFSWQHREPHGRLLAAPVGMGGSGAELLLAPANRSHAGWYSCTARNEVNNRTSEPVYLDIVYGPDEPAISVEPFSPEQGSFSAGEREDVVLSCLAPSNPPSRYIWLHNGSQVHIGQTFVMSAIARGQAGTYTCLAENTHLQTRTQATIVLTVYYPPAGSPSCSALPSADLRDVALRCRWVGGFPAARLRWVGPGEEEQELEEDEEGAAGPSFSMATSIVPGAATRNGSSFTCVATHPALREGAACRTTLWIPAGGPTCAAAATKRDEFVMLRCRWEGGEPPATLRWWDGQGRALGTPTTSTTVLVLSTETQLRGRDFVCVAAHPLRAASTECRLRLDVPELEVERSEVAVLEGGEARLACRHRGGTELGAELGWFDPQQREVPGSSTKYRLERGGAWANLTVRDAEWPRDGGSYRCSAANSVGTNSLRVQLRVERYPAPPNVTISKLRYTRARTEVRLQWRTQGAGNLTGFVVQRRPAKKPQRRTGGTWETAAGDIEPSSRDRRLGGLDPRVVYAFRVLAVNHRTAGHPSEVQTPAEPPFEALPAVMGAAVLGMLVAASMSLLAVYLIARHRDRLPRLHELLFRMAGPDAPQLAEDVNVAVSIEDGEGQGQEEPGGPSTAAMEEEPRSAPPGDPADDAPVDVTITGTALP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(248173..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250420,250505..250798,250869..251171,251474..251596,251671..251695,251773..251888,251965..252047)
location: region:248173-252047:1
so has part: feature:248173-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250420:1:exon
so has part: feature:250505-250798:1:exon
so has part: feature:250869-251171:1:exon
so has part: feature:251474-251596:1:exon
so has part: feature:251671-251695:1:exon
so has part: feature:251773-251888:1:exon
so has part: feature:251965-252047:1:exon

XP_015739535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248173-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250505-250798:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250869-251171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251474-251596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251671-251695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251773-251888:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251965-252047:1:exon

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2 isoform X2
translation: MWRWGVPWPLWLLPLVAAGQALDAGTAAYEERTVTGIRGRAVELSCGSAAPAVVFWSFTALGSAGPPRAVAVGSGAEAAVAPGAGALGRVTLRNGTLELRELRGNAAGRFLCQGLFPEWGRLRVGYAAVMLRVLVPVSKPFVRLTAAAAAEGTEVALTCTVREGTAPLGFSWQHREPHGRLLAAPVGMGGSGAELLLAPANRSHAGWYSCTARNEVNNRTSEPVYLDIVYGPDEPAISVEPFSPEQGSFSAGEREDVVLSCLAPSNPPSRYIWLHNGSQVHIGQTFVMSAIARGQAGTYTCLAENTHLQTRTQATIVLTVYYPPAGSPSCSALPSADLRDVALRCRWVGGFPAARLRWVGPGEEEQELEEDEEGAAGPSFSMATSIVPGAATRNGSSFTCVATHPALREGAACRTTLWIPAGGPTCAAAATKRDEFVMLRCRWEGGEPPATLRWWDGQGRALGTPTTSTTVLVLSTETQLRGRDFVCVAAHPLRAASTECRLRLGKGGTAPCAAPAIAVPRWDAGINPPPRADVPELEVERSEVAVLEGGEARLACRHRGGTELGAELGWFDPQQREVPGSSTKYRLERGGAWANLTVRDAEWPRDGGSYRCSAANSVGTNSLRVQLRVERYPAPPNVTISKLRYTRARTEVRLQWRTQGAGNLTGFVVQRRPAKKPQRRTGGTWETAAGDIEPSSRDRRLGGLDPRVVYAFRVLAVNHRTAGHPSEVQTPGEVGTGRHAVLRWHPGWCQAAVGATEQPGAECLMAELGVSGERQSCAPAAAASCRLQSKQAQVPTLLLRLCRRCPVLPSLLSAPSRLLLTSPVPTCAAFFQLSRPSRRCRP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(248173..248227,248302..248649,249025..249309,249384..249659,249785..250072,250160..250798,250869..251506)
location: region:248173-251506:1
so has part: feature:248173-248227:1:exon
so has part: feature:248302-248649:1:exon
so has part: feature:249025-249309:1:exon
so has part: feature:249384-249659:1:exon
so has part: feature:249785-250072:1:exon
so has part: feature:250160-250798:1:exon
so has part: feature:250869-251506:1:exon

XP_015739534.1
type: Protein
SIO_000068: ncbiprotein

position:251506:1
position: 251506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248173-248227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248302-248649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249025-249309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249384-249659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249785-250072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250160-250798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250869-251506:1:exon

CDON
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252358..279938)
location: region:252358-279938:-1
so has part: feature:252358-279938:-1:exon
subclass of: SO_0000010

107324226
type: Gene
SIO_000068: ncbigene

position:252358:-1
position: 252358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279938:-1
position: 279938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252358-279938:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CDON
product: cell adhesion associated, oncogene regulated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449054.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(252358..254124,254539..254792,257311..257390,259451..259710,260303..260527,261271..261393,264058..264163,264941..265122,265722..265928,266984..267112,267563..267737,269105..269388,272958..273227,273418..273705,273832..273975,274213..274359,275111..275383,276820..276917,279685..279938))
location: region:252358-279938:-1
so has part: feature:279685-279938:-1:exon
so has part: feature:276820-276917:-1:exon
so has part: feature:275111-275383:-1:exon
so has part: feature:274213-274359:-1:exon
so has part: feature:273832-273975:-1:exon
so has part: feature:273418-273705:-1:exon
so has part: feature:272958-273227:-1:exon
so has part: feature:269105-269388:-1:exon
so has part: feature:267563-267737:-1:exon
so has part: feature:266984-267112:-1:exon
so has part: feature:265722-265928:-1:exon
so has part: feature:264941-265122:-1:exon
so has part: feature:264058-264163:-1:exon
so has part: feature:261271-261393:-1:exon
so has part: feature:260303-260527:-1:exon
so has part: feature:259451-259710:-1:exon
so has part: feature:257311-257390:-1:exon
so has part: feature:254539-254792:-1:exon
so has part: feature:252358-254124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279685-279938:-1:exon

position:279685:-1
position: 279685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276820-276917:-1:exon

position:276820:-1
position: 276820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276917:-1
position: 276917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275111-275383:-1:exon

position:275111:-1
position: 275111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275383:-1
position: 275383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274213-274359:-1:exon

position:274213:-1
position: 274213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274359:-1
position: 274359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273832-273975:-1:exon

position:273832:-1
position: 273832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273975:-1
position: 273975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273418-273705:-1:exon

position:273418:-1
position: 273418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273705:-1
position: 273705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:272958-273227:-1:exon

position:272958:-1
position: 272958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273227:-1
position: 273227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:269105-269388:-1:exon

position:269105:-1
position: 269105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269388:-1
position: 269388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267563-267737:-1:exon

position:267563:-1
position: 267563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267737:-1
position: 267737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266984-267112:-1:exon

position:266984:-1
position: 266984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267112:-1
position: 267112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:265722-265928:-1:exon

position:265722:-1
position: 265722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265928:-1
position: 265928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:264941-265122:-1:exon

position:264941:-1
position: 264941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265122:-1
position: 265122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264058-264163:-1:exon

position:264058:-1
position: 264058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264163:-1
position: 264163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:261271-261393:-1:exon

position:261271:-1
position: 261271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261393:-1
position: 261393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:260303-260527:-1:exon

position:260303:-1
position: 260303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260527:-1
position: 260527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:259451-259710:-1:exon

position:259451:-1
position: 259451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259710:-1
position: 259710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:257311-257390:-1:exon

position:257311:-1
position: 257311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257390:-1
position: 257390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:254539-254792:-1:exon

position:254539:-1
position: 254539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254792:-1
position: 254792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:252358-254124:-1:exon

position:254124:-1
position: 254124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes
translation: MQSAPACLHALLITAALISACSSDLTPRFTSEPISAVQKPGGPVVLHCSAEPPSAHISWLLDGEPLGSGLQGVEIQHGSLSIASLSPATSGRYQCVANSSAGAVLSRAAVVSIGSLAHFDPSLTPVVVAEEGGTALISCTVPHSNPRAQIRFRVRGKWLLRSADKYLILPSGNLQILNVSMEDRGSYRCAAYNPVTHDLRIEPTGRKLVVTRSSSAQPRILHPQQPQVLSVLQSSPLTLECVAAGLPMAAVRWERDGRDALHGGRWALQHSHLVTDGLQPEDSGNYSCVLESGLGELVYANYSLTVLEPASISQGLQDETVAVGTTVSLQCAAHGTPSPSLSWLHNAAPLHPSPRHFLLGGSLQIHGVTMQDAGVYQCMADNGVGFAQSAGRLRVLPEADPKAEEMALTETAQGDESRSDSGVEEVIPSSPPTELRLDTAATEKPWGSISPPEAPIILSPPQTLSPDMYTLVWRSGRDGGLPINAYFVKYRKLDDGVGSAGGWHTVRVPGSENELRLSELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGVPKLPIVHEGTNNFGVVLPDVPRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYRRVGRSSDWLVAADSISPSKLSVEVRSLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTHRFSSRPIAGPHIAYTEAISDTQIMLKWTYIPASNNNTPIHGFYIYYRPTDSDNDSDYKRDVVEGTKQWHLINHLQPETSYDIKMQCFNEGGESEYSNVMICETKVKRMPGASEYPAKELSTPPSPPERAGGSGGPSSGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMHKYDPPGYLYQGAELSGQMIKYTTLPGTSRVNGSVHSSFLSSSTGSACPHHHKAAAGLDGAVNGGVGLHSSSLPGAHLDCERAQHLVNGAGLCAALPQAEPPECISCRNCHNNNRCFTKTNGTFSSSALPVMPIVAPYQQDSLEMKPLSHIMVAMCLASGVPEHGGRMEEDSVETAEQPPSPQPCCRGSAGPLCLQYSDGDSCVLSETPNHVLSWSPLVLQPVPKDCRDKPGWTATLCGSGQPPLQES
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(253976..254124,254539..254792,257311..257390,259451..259710,260303..260527,261271..261393,264058..264163,264941..265122,265722..265928,266984..267112,267563..267737,269105..269388,272958..273227,273418..273705,273832..273975,274213..274359,275111..275383,276820..276889))
location: region:253976-276889:-1
so has part: feature:276820-276889:-1:exon
so has part: feature:275111-275383:-1:exon
so has part: feature:274213-274359:-1:exon
so has part: feature:273832-273975:-1:exon
so has part: feature:273418-273705:-1:exon
so has part: feature:272958-273227:-1:exon
so has part: feature:269105-269388:-1:exon
so has part: feature:267563-267737:-1:exon
so has part: feature:266984-267112:-1:exon
so has part: feature:265722-265928:-1:exon
so has part: feature:264941-265122:-1:exon
so has part: feature:264058-264163:-1:exon
so has part: feature:261271-261393:-1:exon
so has part: feature:260303-260527:-1:exon
so has part: feature:259451-259710:-1:exon
so has part: feature:257311-257390:-1:exon
so has part: feature:254539-254792:-1:exon
so has part: feature:253976-254124:-1:exon

XP_032304945.1
type: Protein
SIO_000068: ncbiprotein

position:253976:-1
position: 253976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276889:-1
position: 276889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276820-276889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275111-275383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274213-274359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273832-273975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273418-273705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272958-273227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269105-269388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267563-267737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266984-267112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265722-265928:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264941-265122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264163:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261271-261393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260303-260527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259451-259710:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257311-257390:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254539-254792:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253976-254124:-1:exon

CHEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297466..300914)
location: region:297466-300914:-1
so has part: feature:297466-300914:-1:exon
subclass of: SO_0000010

107324224
type: Gene
SIO_000068: ncbigene

position:297466:-1
position: 297466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300914:-1
position: 300914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297466-300914:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CHEK1
product: checkpoint kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_015884052.2
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297466..297708,297836..297937,298015..298146,298599..298776,298913..299021,299106..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300483,300657..300914))
location: region:297466-300914:-1
so has part: feature:300657-300914:-1:exon
so has part: feature:300260-300483:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:299106-299201:-1:exon
so has part: feature:298913-299021:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297466-297708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300657-300914:-1:exon

position:300657:-1
position: 300657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300260-300483:-1:exon

position:300260:-1
position: 300260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300483:-1
position: 300483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300121-300185:-1:exon

position:300121:-1
position: 300121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300185:-1
position: 300185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299819-299888:-1:exon

position:299819:-1
position: 299819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299888:-1
position: 299888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299553-299741:-1:exon

position:299553:-1
position: 299553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299741:-1
position: 299741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299270-299374:-1:exon

position:299270:-1
position: 299270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299374:-1
position: 299374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299106-299201:-1:exon

position:299106:-1
position: 299106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299201:-1
position: 299201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:298913-299021:-1:exon

position:298913:-1
position: 298913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299021:-1
position: 299021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:298599-298776:-1:exon

position:298599:-1
position: 298599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298776:-1
position: 298776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:298015-298146:-1:exon

position:298015:-1
position: 298015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298146:-1
position: 298146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:297836-297937:-1:exon

position:297836:-1
position: 297836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297937:-1
position: 297937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:297466-297708:-1:exon

position:297708:-1
position: 297708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CHEK1
product: checkpoint kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_015884051.2
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297466..297708,297836..297937,298015..298146,298599..298776,298913..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300483,300657..300914))
location: region:297466-300914:-1
so has part: feature:300657-300914:-1:exon
so has part: feature:300260-300483:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:298913-299201:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297466-297708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300657-300914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300260-300483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300121-300185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299819-299888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299553-299741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299270-299374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298913-299201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298599-298776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298015-298146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297836-297937:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297466-297708:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CHEK1
product: checkpoint kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015884054.2
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297466..297708,297836..297937,298015..298146,298599..298776,298913..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300483,300646..300772))
location: region:297466-300772:-1
so has part: feature:300646-300772:-1:exon
so has part: feature:300260-300483:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:298913-299201:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297466-297708:-1:exon

position:300772:-1
position: 300772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300646-300772:-1:exon

position:300646:-1
position: 300646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300260-300483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300121-300185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299819-299888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299553-299741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299270-299374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298913-299201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298599-298776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298015-298146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297836-297937:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297466-297708:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X2
translation: MTGIRVSALGSVPFGSVRFRSRVRWAGLGAGLRCARAVRGVTTWRRREPCLCAGRCVMAVPFVEDWDLVQTLGEGAYGEVQLALNRRTEEAVAVKIVDMKRAADCPENIKKEICINKMLNHDNVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDDRDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDSCQEYSDWKERKTYLSPWRKIDSAPLALLHKILTESPTARITIPDIKKDRWYCRPLKKGTKRSRVSSGGVTESPGALPKHIRSDTDFSPVKSALGEDKVSYSTSQPEPGTGGTLWDGSTGSIDRLVQGISFSQPACPEHMLLNSQLLGTPGSSQSPWQRLVRRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLEMESRILVDFRLSKGDGLEFKRHFLKIKGKLSDVVSTQKVWLPPP
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297613..297708,297836..297937,298015..298146,298599..298776,298913..299021,299106..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300483,300657..300892))
location: region:297613-300892:-1
so has part: feature:300657-300892:-1:exon
so has part: feature:300260-300483:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:299106-299201:-1:exon
so has part: feature:298913-299021:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297613-297708:-1:exon

XP_015739538.1
type: Protein
SIO_000068: ncbiprotein

position:297613:-1
position: 297613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300892:-1
position: 300892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300657-300892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300260-300483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300121-300185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299819-299888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299553-299741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299270-299374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299106-299201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298913-299021:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298599-298776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298015-298146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297836-297937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297613-297708:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X1
translation: MTGIRVSALGSVPFGSVRFRSRVRWAGLGAGLRCARAVRGVTTWRRREPCLCAGRCVMAVPFVEDWDLVQTLGEGAYGEVQLALNRRTEEAVAVKIVDMKRAADCPENIKKEICINKMLNHDNVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDDRDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDSCQEYSDWKERKTYLSPWRKIDSAPLALLHKILTESPTARITIPDIKKDRWYCRPLKKGEGWVRAVGQGSFPARAVHSVGSVLCFAGTKRSRVSSGGVTESPGALPKHIRSDTDFSPVKSALGEDKVSYSTSQPEPGTGGTLWDGSTGSIDRLVQGISFSQPACPEHMLLNSQLLGTPGSSQSPWQRLVRRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLEMESRILVDFRLSKGDGLEFKRHFLKIKGKLSDVVSTQKVWLPPP
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297613..297708,297836..297937,298015..298146,298599..298776,298913..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300483,300657..300892))
location: region:297613-300892:-1
so has part: feature:300657-300892:-1:exon
so has part: feature:300260-300483:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:298913-299201:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297613-297708:-1:exon

XP_015739537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300657-300892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300260-300483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300121-300185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299819-299888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299553-299741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299270-299374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298913-299201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298599-298776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298015-298146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297836-297937:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297613-297708:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X3
translation: MKRAADCPENIKKEICINKMLNHDNVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDDRDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDSCQEYSDWKERKTYLSPWRKIDSAPLALLHKILTESPTARITIPDIKKDRWYCRPLKKGEGWVRAVGQGSFPARAVHSVGSVLCFAGTKRSRVSSGGVTESPGALPKHIRSDTDFSPVKSALGEDKVSYSTSQPEPGTGGTLWDGSTGSIDRLVQGISFSQPACPEHMLLNSQLLGTPGSSQSPWQRLVRRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLEMESRILVDFRLSKGDGLEFKRHFLKIKGKLSDVVSTQKVWLPPP
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(297613..297708,297836..297937,298015..298146,298599..298776,298913..299201,299270..299374,299553..299741,299819..299888,300121..300185,300260..300425))
location: region:297613-300425:-1
so has part: feature:300260-300425:-1:exon
so has part: feature:300121-300185:-1:exon
so has part: feature:299819-299888:-1:exon
so has part: feature:299553-299741:-1:exon
so has part: feature:299270-299374:-1:exon
so has part: feature:298913-299201:-1:exon
so has part: feature:298599-298776:-1:exon
so has part: feature:298015-298146:-1:exon
so has part: feature:297836-297937:-1:exon
so has part: feature:297613-297708:-1:exon

XP_015739540.1
type: Protein
SIO_000068: ncbiprotein

position:300425:-1
position: 300425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300260-300425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300121-300185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299819-299888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299553-299741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299270-299374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298913-299201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298599-298776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298015-298146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297836-297937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297613-297708:-1:exon

STT3A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300883..306743)
location: region:300883-306743:-1
so has part: feature:300883-306743:-1:exon
subclass of: SO_0000010

107324223
type: Gene
SIO_000068: ncbigene

position:300883:-1
position: 300883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306743:-1
position: 306743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300883-306743:-1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_015884050.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(300883..301141,301213..301328,301508..301696,301769..301871,301942..302058,302131..302319,302434..302589,302718..302809,302931..303086,303214..303394,303796..303960,304136..304242,304323..304413,304513..304658,304794..304915,305061..305121,305278..305401,305503..305587,306617..306743))
location: region:300883-306743:-1
so has part: feature:306617-306743:-1:exon
so has part: feature:305503-305587:-1:exon
so has part: feature:305278-305401:-1:exon
so has part: feature:305061-305121:-1:exon
so has part: feature:304794-304915:-1:exon
so has part: feature:304513-304658:-1:exon
so has part: feature:304323-304413:-1:exon
so has part: feature:304136-304242:-1:exon
so has part: feature:303796-303960:-1:exon
so has part: feature:303214-303394:-1:exon
so has part: feature:302931-303086:-1:exon
so has part: feature:302718-302809:-1:exon
so has part: feature:302434-302589:-1:exon
so has part: feature:302131-302319:-1:exon
so has part: feature:301942-302058:-1:exon
so has part: feature:301769-301871:-1:exon
so has part: feature:301508-301696:-1:exon
so has part: feature:301213-301328:-1:exon
so has part: feature:300883-301141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306617-306743:-1:exon

position:306617:-1
position: 306617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305503-305587:-1:exon

position:305503:-1
position: 305503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305587:-1
position: 305587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305278-305401:-1:exon

position:305278:-1
position: 305278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305401:-1
position: 305401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305061-305121:-1:exon

position:305061:-1
position: 305061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305121:-1
position: 305121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304794-304915:-1:exon

position:304794:-1
position: 304794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304915:-1
position: 304915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:304513-304658:-1:exon

position:304513:-1
position: 304513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304658:-1
position: 304658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304323-304413:-1:exon

position:304323:-1
position: 304323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304413:-1
position: 304413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:304136-304242:-1:exon

position:304136:-1
position: 304136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304242:-1
position: 304242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303796-303960:-1:exon

position:303796:-1
position: 303796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303960:-1
position: 303960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:303214-303394:-1:exon

position:303214:-1
position: 303214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303394:-1
position: 303394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:302931-303086:-1:exon

position:302931:-1
position: 302931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303086:-1
position: 303086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302718-302809:-1:exon

position:302718:-1
position: 302718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302809:-1
position: 302809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:302434-302589:-1:exon

position:302434:-1
position: 302434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302589:-1
position: 302589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:302131-302319:-1:exon

position:302131:-1
position: 302131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302319:-1
position: 302319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:301942-302058:-1:exon

position:301942:-1
position: 301942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302058:-1
position: 302058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:301769-301871:-1:exon

position:301769:-1
position: 301769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301871:-1
position: 301871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:301508-301696:-1:exon

position:301508:-1
position: 301508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301696:-1
position: 301696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:301213-301328:-1:exon

position:301213:-1
position: 301213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301328:-1
position: 301328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:300883-301141:-1:exon

position:301141:-1
position: 301141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(301103..301141,301213..301328,301508..301696,301769..301871,301942..302058,302131..302319,302434..302589,302718..302809,302931..303086,303214..303394,303796..303960,304136..304242,304323..304413,304513..304658,304794..304915,305061..305121,305278..305365))
location: region:301103-305365:-1
so has part: feature:305278-305365:-1:exon
so has part: feature:305061-305121:-1:exon
so has part: feature:304794-304915:-1:exon
so has part: feature:304513-304658:-1:exon
so has part: feature:304323-304413:-1:exon
so has part: feature:304136-304242:-1:exon
so has part: feature:303796-303960:-1:exon
so has part: feature:303214-303394:-1:exon
so has part: feature:302931-303086:-1:exon
so has part: feature:302718-302809:-1:exon
so has part: feature:302434-302589:-1:exon
so has part: feature:302131-302319:-1:exon
so has part: feature:301942-302058:-1:exon
so has part: feature:301769-301871:-1:exon
so has part: feature:301508-301696:-1:exon
so has part: feature:301213-301328:-1:exon
so has part: feature:301103-301141:-1:exon

XP_015739536.1
type: Protein
SIO_000068: ncbiprotein

position:301103:-1
position: 301103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305365:-1
position: 305365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305278-305365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305061-305121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304794-304915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304513-304658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304323-304413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304136-304242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303796-303960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303214-303394:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302931-303086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302718-302809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302434-302589:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302131-302319:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301942-302058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301769-301871:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:301508-301696:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:301213-301328:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301103-301141:-1:exon

EI24
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307061..311480)
location: region:307061-311480:-1
so has part: feature:307061-311480:-1:exon
subclass of: SO_0000010

107324225
type: Gene
SIO_000068: ncbigene

position:307061:-1
position: 307061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311480:-1
position: 311480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307061-311480:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: EI24
product: EI24 autophagy associated transmembrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 166 samples with support for all annotated introns
transcript id: XM_015884055.2
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(307061..307990,308238..308312,308478..308589,308797..308908,308988..309107,309254..309378,309520..309586,309794..309854,310045..310190,311029..311161,311379..311480))
location: region:307061-311480:-1
so has part: feature:311379-311480:-1:exon
so has part: feature:311029-311161:-1:exon
so has part: feature:310045-310190:-1:exon
so has part: feature:309794-309854:-1:exon
so has part: feature:309520-309586:-1:exon
so has part: feature:309254-309378:-1:exon
so has part: feature:308988-309107:-1:exon
so has part: feature:308797-308908:-1:exon
so has part: feature:308478-308589:-1:exon
so has part: feature:308238-308312:-1:exon
so has part: feature:307061-307990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311379-311480:-1:exon

position:311379:-1
position: 311379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311029-311161:-1:exon

position:311029:-1
position: 311029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311161:-1
position: 311161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310045-310190:-1:exon

position:310045:-1
position: 310045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310190:-1
position: 310190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309794-309854:-1:exon

position:309794:-1
position: 309794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309854:-1
position: 309854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309520-309586:-1:exon

position:309520:-1
position: 309520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309586:-1
position: 309586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309254-309378:-1:exon

position:309254:-1
position: 309254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309378:-1
position: 309378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:308988-309107:-1:exon

position:308988:-1
position: 308988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309107:-1
position: 309107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:308797-308908:-1:exon

position:308797:-1
position: 308797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308908:-1
position: 308908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:308478-308589:-1:exon

position:308478:-1
position: 308478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308589:-1
position: 308589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:308238-308312:-1:exon

position:308238:-1
position: 308238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308312:-1
position: 308312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:307061-307990:-1:exon

position:307990:-1
position: 307990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog
translation: MADGVRTFLQDLVRGIKDSIWGICTISKLDARIQQKREEQKRRRANSAHAQRRFHMEERKQENEPRIVSRIFQCCAWNGGVFWLSLFLFYRVFIPALQSVTAQIIGDPSLHGDVWSWLEFILTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLISLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKTYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSSSADRLLSPQPSPAKHKAAPGH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(307831..307990,308238..308312,308478..308589,308797..308908,308988..309107,309254..309378,309520..309586,309794..309854,310045..310190,311029..311070))
location: region:307831-311070:-1
so has part: feature:311029-311070:-1:exon
so has part: feature:310045-310190:-1:exon
so has part: feature:309794-309854:-1:exon
so has part: feature:309520-309586:-1:exon
so has part: feature:309254-309378:-1:exon
so has part: feature:308988-309107:-1:exon
so has part: feature:308797-308908:-1:exon
so has part: feature:308478-308589:-1:exon
so has part: feature:308238-308312:-1:exon
so has part: feature:307831-307990:-1:exon

XP_015739541.1
type: Protein
SIO_000068: ncbiprotein

position:307831:-1
position: 307831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311070:-1
position: 311070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311029-311070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310045-310190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309794-309854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309520-309586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309254-309378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:308988-309107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:308797-308908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:308478-308589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308238-308312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307831-307990:-1:exon

FOXRED1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312384..315296)
location: region:312384-315296:-1
so has part: feature:312384-315296:-1:exon
subclass of: SO_0000010

107324311
type: Gene
SIO_000068: ncbigene

position:312384:-1
position: 312384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315296:-1
position: 315296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312384-315296:-1:exon

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_015884250.2
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(312384..312685,312783..312887,312991..313120,313201..313355,313449..313519,313588..313689,313763..313857,313935..314053,314124..314234,314310..314542,315178..315296))
location: region:312384-315296:-1
so has part: feature:315178-315296:-1:exon
so has part: feature:314310-314542:-1:exon
so has part: feature:314124-314234:-1:exon
so has part: feature:313935-314053:-1:exon
so has part: feature:313763-313857:-1:exon
so has part: feature:313588-313689:-1:exon
so has part: feature:313449-313519:-1:exon
so has part: feature:313201-313355:-1:exon
so has part: feature:312991-313120:-1:exon
so has part: feature:312783-312887:-1:exon
so has part: feature:312384-312685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315178-315296:-1:exon

position:315178:-1
position: 315178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314310-314542:-1:exon

position:314310:-1
position: 314310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314542:-1
position: 314542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314124-314234:-1:exon

position:314124:-1
position: 314124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314234:-1
position: 314234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313935-314053:-1:exon

position:313935:-1
position: 313935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314053:-1
position: 314053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313763-313857:-1:exon

position:313763:-1
position: 313763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313857:-1
position: 313857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313588-313689:-1:exon

position:313588:-1
position: 313588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313689:-1
position: 313689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:313449-313519:-1:exon

position:313449:-1
position: 313449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313519:-1
position: 313519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:313201-313355:-1:exon

position:313201:-1
position: 313201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313355:-1
position: 313355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:312991-313120:-1:exon

position:312991:-1
position: 312991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313120:-1
position: 313120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:312783-312887:-1:exon

position:312783:-1
position: 312783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312887:-1
position: 312887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:312384-312685:-1:exon

position:312685:-1
position: 312685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: MWRVVRGGRGVRGVRSNGGKRGRGLRTGTERWTDGFRELGPALSRLAQTLRGHLPDSGGPWSPTQPYHNSPPPPEQADVVVAGGGVLGWSVAYWLKKLENRRHGMRVVVVERDPTYSQASTVLSVGGIRQQFSLRENIRLSLHSAAFLRTINEHLWVPNEPPIDLQFQPSGYLFLASERGAATLEAGVKVQREEGAQVVLLSPDQLKAKFPWINTEDVAVASYGLENEGWFDPWSLLTAFRRKAMSLGVYSCVGEVTSFVTDTADNTPGMPRGVGRVKYVNVRLPDSPEQQPVSCAIVVAAAGAWIGKLLDSATAGLRGSLPLSPIPIEPRKRYVYVWHCPNGPGLETPFLIDTSGAYFRREGIAGNYLGSMSPPEGREPDTGNLDVDHSFFDEEVWPRLAHRVPAFQSLKVKSSWAGYYDYNSFDQNGVLGPHPQLQNVFVLGGFSGHGLQQSPAAGRAAAELLLYGTCTAVDVSRMAPGRLWGNEPLLEAAIV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(312431..312685,312783..312887,312991..313120,313201..313355,313449..313519,313588..313689,313763..313857,313935..314053,314124..314234,314310..314542,315178..315289))
location: region:312431-315289:-1
so has part: feature:315178-315289:-1:exon
so has part: feature:314310-314542:-1:exon
so has part: feature:314124-314234:-1:exon
so has part: feature:313935-314053:-1:exon
so has part: feature:313763-313857:-1:exon
so has part: feature:313588-313689:-1:exon
so has part: feature:313449-313519:-1:exon
so has part: feature:313201-313355:-1:exon
so has part: feature:312991-313120:-1:exon
so has part: feature:312783-312887:-1:exon
so has part: feature:312431-312685:-1:exon

XP_015739736.1
type: Protein
SIO_000068: ncbiprotein

position:312431:-1
position: 312431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315289:-1
position: 315289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315178-315289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314310-314542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314124-314234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313935-314053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313763-313857:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313588-313689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313449-313519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313201-313355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312991-313120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312783-312887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:312431-312685:-1:exon

SRPRA
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315435..321326
location: region:315435-321326:1
so has part: feature:315435-321326:1:exon
subclass of: SO_0000010

107324196
type: Gene
SIO_000068: ncbigene

position:315435:1
position: 315435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321326:1
position: 321326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315435-321326:1:exon

SRPRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SRPRA
product: SRP receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 45 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015883995.2
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(315435..315626,315940..316023,316671..316834,317066..317226,317382..317532,317697..317850,318202..318308,318502..318620,318708..318794,318979..319151,319236..319449,319535..319698,319803..319901,320090..321326)
location: region:315435-321326:1
so has part: feature:315435-315626:1:exon
so has part: feature:315940-316023:1:exon
so has part: feature:316671-316834:1:exon
so has part: feature:317066-317226:1:exon
so has part: feature:317382-317532:1:exon
so has part: feature:317697-317850:1:exon
so has part: feature:318202-318308:1:exon
so has part: feature:318502-318620:1:exon
so has part: feature:318708-318794:1:exon
so has part: feature:318979-319151:1:exon
so has part: feature:319236-319449:1:exon
so has part: feature:319535-319698:1:exon
so has part: feature:319803-319901:1:exon
so has part: feature:320090-321326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315435-315626:1:exon

position:315626:1
position: 315626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315940-316023:1:exon

position:315940:1
position: 315940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316023:1
position: 316023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316671-316834:1:exon

position:316671:1
position: 316671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316834:1
position: 316834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317066-317226:1:exon

position:317066:1
position: 317066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317226:1
position: 317226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317382-317532:1:exon

position:317382:1
position: 317382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317532:1
position: 317532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:317697-317850:1:exon

position:317697:1
position: 317697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317850:1
position: 317850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318202-318308:1:exon

position:318202:1
position: 318202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318308:1
position: 318308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:318502-318620:1:exon

position:318502:1
position: 318502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318620:1
position: 318620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318708-318794:1:exon

position:318708:1
position: 318708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318794:1
position: 318794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:318979-319151:1:exon

position:318979:1
position: 318979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319151:1
position: 319151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:319236-319449:1:exon

position:319236:1
position: 319236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319449:1
position: 319449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:319535-319698:1:exon

position:319535:1
position: 319535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319698:1
position: 319698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:319803-319901:1:exon

position:319803:1
position: 319803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319901:1
position: 319901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:320090-321326:1:exon

position:320090:1
position: 320090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRPRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: MLDFFTIFSKGGLVLWCFQGVRGPAAAATAPVNALIRSVLLQERGGSNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKYRNEFQQKGALGILNGTFDFKDDFLRLLREAEESSKVRAPTVMKTFEQSVKSQKTVKCMIETRGEKPKEKVKNKKNKGSKKEGNEAVTASAKAAPGEKQSAAGDREELTKDEILQKNREEFFKRHMKAGEKSSKSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPMEEFDADMALKDQNREPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTRQDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMKA
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(315501..315626,315940..316023,316671..316834,317066..317226,317382..317532,317697..317850,318202..318308,318502..318620,318708..318794,318979..319151,319236..319449,319535..319698,319803..319901,320090..320218)
location: region:315501-320218:1
so has part: feature:315501-315626:1:exon
so has part: feature:315940-316023:1:exon
so has part: feature:316671-316834:1:exon
so has part: feature:317066-317226:1:exon
so has part: feature:317382-317532:1:exon
so has part: feature:317697-317850:1:exon
so has part: feature:318202-318308:1:exon
so has part: feature:318502-318620:1:exon
so has part: feature:318708-318794:1:exon
so has part: feature:318979-319151:1:exon
so has part: feature:319236-319449:1:exon
so has part: feature:319535-319698:1:exon
so has part: feature:319803-319901:1:exon
so has part: feature:320090-320218:1:exon

XP_015739481.1
type: Protein
SIO_000068: ncbiprotein

position:315501:1
position: 315501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320218:1
position: 320218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315501-315626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315940-316023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316671-316834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317066-317226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317382-317532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:317697-317850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318202-318308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318502-318620:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318708-318794:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318979-319151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319236-319449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319535-319698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319803-319901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320090-320218:1:exon

FAM118B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(321438..326625)
location: region:321438-326625:-1
so has part: feature:321438-326625:-1:exon
subclass of: SO_0000010

107324197
type: Gene
SIO_000068: ncbigene

position:321438:-1
position: 321438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326625:-1
position: 326625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321438-326625:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_015883997.2
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321438..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324669,326193..326241,326562..326625))
location: region:321438-326625:-1
so has part: feature:326562-326625:-1:exon
so has part: feature:326193-326241:-1:exon
so has part: feature:324592-324669:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321438-321848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326562-326625:-1:exon

position:326562:-1
position: 326562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326193-326241:-1:exon

position:326193:-1
position: 326193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326241:-1
position: 326241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324592-324669:-1:exon

position:324592:-1
position: 324592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324669:-1
position: 324669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323855-324107:-1:exon

position:323855:-1
position: 323855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324107:-1
position: 324107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323354-323581:-1:exon

position:323354:-1
position: 323354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323581:-1
position: 323581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322938-323066:-1:exon

position:322938:-1
position: 322938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323066:-1
position: 323066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322199-322484:-1:exon

position:322199:-1
position: 322199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322484:-1
position: 322484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:322035-322094:-1:exon

position:322035:-1
position: 322035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322094:-1
position: 322094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321438-321848:-1:exon

position:321848:-1
position: 321848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015883996.2
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321438..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324669,326562..326581))
location: region:321438-326581:-1
so has part: feature:326562-326581:-1:exon
so has part: feature:324592-324669:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321438-321848:-1:exon

position:326581:-1
position: 326581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326562-326581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324592-324669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321438-321848:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_015883998.2
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321438..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324669,326193..326241,326484..326535))
location: region:321438-326535:-1
so has part: feature:326484-326535:-1:exon
so has part: feature:326193-326241:-1:exon
so has part: feature:324592-324669:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321438-321848:-1:exon

position:326535:-1
position: 326535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326484-326535:-1:exon

position:326484:-1
position: 326484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326193-326241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324592-324669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321438-321848:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_032449138.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321438..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324669,324783..324953))
location: region:321438-324953:-1
so has part: feature:324783-324953:-1:exon
so has part: feature:324592-324669:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321438-321848:-1:exon

position:324953:-1
position: 324953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324783-324953:-1:exon

position:324783:-1
position: 324783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324592-324669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321438-321848:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVPKEGQQLNGSAAAHAEITGRST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321835..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324662))
location: region:321835-324662:-1
so has part: feature:324592-324662:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321835-321848:-1:exon

XP_015739482.1
type: Protein
SIO_000068: ncbiprotein

position:321835:-1
position: 321835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324662:-1
position: 324662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324592-324662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321835-321848:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVPKEGQQLNGSAAAHAEITGRST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321835..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324662))
location: region:321835-324662:-1
so has part: feature:324592-324662:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321835-321848:-1:exon

XP_015739483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324592-324662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321835-321848:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVPKEGQQLNGSAAAHAEITGRST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321835..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324662))
location: region:321835-324662:-1
so has part: feature:324592-324662:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321835-321848:-1:exon

XP_015739484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324592-324662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321835-321848:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVPKEGQQLNGSAAAHAEITGRST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(321835..321848,322035..322094,322199..322484,322938..323066,323354..323581,323855..324107,324592..324662))
location: region:321835-324662:-1
so has part: feature:324592-324662:-1:exon
so has part: feature:323855-324107:-1:exon
so has part: feature:323354-323581:-1:exon
so has part: feature:322938-323066:-1:exon
so has part: feature:322199-322484:-1:exon
so has part: feature:322035-322094:-1:exon
so has part: feature:321835-321848:-1:exon

XP_032305029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324592-324662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323855-324107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323354-323581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322938-323066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322199-322484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322035-322094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321835-321848:-1:exon

TIRAP
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326687..329344
location: region:326687-329344:1
so has part: feature:326687-329344:1:exon
subclass of: SO_0000010

107324201
type: Gene
SIO_000068: ncbigene

position:326687:1
position: 326687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329344:1
position: 329344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326687-329344:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_015884007.2
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(326687..326812,327200..327275,328168..328779,328950..329344)
location: region:326687-329344:1
so has part: feature:326687-326812:1:exon
so has part: feature:327200-327275:1:exon
so has part: feature:328168-328779:1:exon
so has part: feature:328950-329344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326687-326812:1:exon

position:326812:1
position: 326812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327200-327275:1:exon

position:327200:1
position: 327200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327275:1
position: 327275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328168-328779:1:exon

position:328168:1
position: 328168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328779:1
position: 328779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328950-329344:1:exon

position:328950:1
position: 328950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_015884008.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(326755..326812,327200..327275,327908..327962,328168..328779,328950..329344)
location: region:326755-329344:1
so has part: feature:326755-326812:1:exon
so has part: feature:327200-327275:1:exon
so has part: feature:327908-327962:1:exon
so has part: feature:328168-328779:1:exon
so has part: feature:328950-329344:1:exon

position:326755:1
position: 326755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326755-326812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327200-327275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327908-327962:1:exon

position:327908:1
position: 327908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327962:1
position: 327962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328168-328779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328950-329344:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MRGFPALPSRPAGWFRRLLQKPRQSSIHTSSSSHSTASHSLPSSPSSSSSSSAWNSNSSSSTSTAQPDCPAPVDIISSSDARWVKRYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGGAVVTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMAGGRTIPVLKDIDRKDYPKELRNLYYIYTALKENCFRRIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(327239..327275,328168..328779,328950..328993)
location: region:327239-328993:1
so has part: feature:327239-327275:1:exon
so has part: feature:328168-328779:1:exon
so has part: feature:328950-328993:1:exon

XP_015739493.1
type: Protein
SIO_000068: ncbiprotein

position:327239:1
position: 327239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328993:1
position: 328993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327239-327275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328168-328779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328950-328993:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X2
translation: MAGWFRRLLQKPRQSSIHTSSSSHSTASHSLPSSPSSSSSSSAWNSNSSSSTSTAQPDCPAPVDIISSSDARWVKRYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGGAVVTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMAGGRTIPVLKDIDRKDYPKELRNLYYIYTALKENCFRRIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(327956..327962,328168..328779,328950..328993)
location: region:327956-328993:1
so has part: feature:327956-327962:1:exon
so has part: feature:328168-328779:1:exon
so has part: feature:328950-328993:1:exon

XP_015739494.1
type: Protein
SIO_000068: ncbiprotein

position:327956:1
position: 327956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327956-327962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328168-328779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328950-328993:1:exon

DCPS
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329410..343751
location: region:329410-343751:1
so has part: feature:329410-343751:1:exon
subclass of: SO_0000010

107324199
type: Gene
SIO_000068: ncbigene

position:329410:1
position: 329410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343751:1
position: 343751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329410-343751:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCPS
product: decapping enzyme, scavenger, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015884003.2
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329410..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,342876..343056,343227..343751)
location: region:329410-343751:1
so has part: feature:329410-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342876-343056:1:exon
so has part: feature:343227-343751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329410-329776:1:exon

position:329776:1
position: 329776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

position:329850:1
position: 329850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330018:1
position: 330018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

position:334998:1
position: 334998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335143:1
position: 335143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

position:337120:1
position: 337120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337233:1
position: 337233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

position:340405:1
position: 340405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340515:1
position: 340515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

position:342376:1
position: 342376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342636:1
position: 342636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:342876-343056:1:exon

position:342876:1
position: 342876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343056:1
position: 343056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343227-343751:1:exon

position:343227:1
position: 343227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCPS
product: decapping enzyme, scavenger, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015884004.2
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329410..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,342879..343056,343227..343751)
location: region:329410-343751:1
so has part: feature:329410-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342879-343056:1:exon
so has part: feature:343227-343751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329410-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342879-343056:1:exon

position:342879:1
position: 342879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343227-343751:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCPS
product: decapping enzyme, scavenger, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_015884005.2
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329410..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,343227..343751)
location: region:329410-343751:1
so has part: feature:329410-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:343227-343751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329410-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343227-343751:1:exon

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase isoform X3
translation: MGLWVLRPPGGAVAAPAPRCPRAAMADGPAPKRRRDEAEAAPVGSSFPLGSVRLRRLLRDSAREKAAFVHGQVVGAAGEETDAVLILEKTPFQEEKIEELLRRHGKMELQMSNDIYSTYRLQPPPELSEIKVTVVHPATEKHLQKYLRQEVHLIRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIHRRDVKSLRDLTAEHLPLLRNILQEGKEAITKHFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGCSVERAHLLEDVMDNLLLDAQHYQKRALTFPLRADEPLLKRFQEAGRGCCVTERS
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329561..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,343227..343253)
location: region:329561-343253:1
so has part: feature:329561-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:343227-343253:1:exon

XP_015739491.2
type: Protein
SIO_000068: ncbiprotein

position:329561:1
position: 329561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343253:1
position: 343253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329561-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343227-343253:1:exon

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase isoform X1
translation: MGLWVLRPPGGAVAAPAPRCPRAAMADGPAPKRRRDEAEAAPVGSSFPLGSVRLRRLLRDSAREKAAFVHGQVVGAAGEETDAVLILEKTPFQEEKIEELLRRHGKMELQMSNDIYSTYRLQPPPELSEIKVTVVHPATEKHLQKYLRQEVHLIRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIHRRDVKSLRDLTAEHLPLLRNILQEGKEAITKHFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGCSVERAHLLEDVMDNLLLDAQHYQKRALTFPLRADEPLLKRFQEAGRQPGLLRGAAAGGPCAHPPSPSDPHRGVQQSPVCLLPHQGMEPLKAA
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329561..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,342876..343016)
location: region:329561-343016:1
so has part: feature:329561-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342876-343016:1:exon

XP_015739489.2
type: Protein
SIO_000068: ncbiprotein

position:343016:1
position: 343016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329561-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342876-343016:1:exon

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase isoform X2
translation: MGLWVLRPPGGAVAAPAPRCPRAAMADGPAPKRRRDEAEAAPVGSSFPLGSVRLRRLLRDSAREKAAFVHGQVVGAAGEETDAVLILEKTPFQEEKIEELLRRHGKMELQMSNDIYSTYRLQPPPELSEIKVTVVHPATEKHLQKYLRQEVHLIRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIHRRDVKSLRDLTAEHLPLLRNILQEGKEAITKHFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGCSVERAHLLEDVMDNLLLDAQHYQKRALTFPLRADEPLLKRFQEAGRPGLLRGAAAGGPCAHPPSPSDPHRGVQQSPVCLLPHQGMEPLKAA
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329561..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342636,342879..343016)
location: region:329561-343016:1
so has part: feature:329561-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342879-343016:1:exon

XP_015739490.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329561-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342879-343016:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCPS
product: decapping enzyme, scavenger, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_032449139.1
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329574..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342850)
location: region:329574-342850:1
so has part: feature:329574-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342850:1:exon

position:329574:1
position: 329574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342850:1
position: 342850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329574-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342850:1:exon

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase isoform X4
translation: MADGPAPKRRRDEAEAAPVGSSFPLGSVRLRRLLRDSAREKAAFVHGQVVGAAGEETDAVLILEKTPFQEEKIEELLRRHGKMELQMSNDIYSTYRLQPPPELSEIKVTVVHPATEKHLQKYLRQEVHLIRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIHRRDVKSLRDLTAEHLPLLRNILQEGKEAITKHFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGCSVERAHLLEDVMDNLLLDAQHYQKRALTFPLRADEPLLKRFQEAGRV
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(329633..329776,329850..330018,334998..335143,337120..337233,340405..340515,342376..342642)
location: region:329633-342642:1
so has part: feature:329633-329776:1:exon
so has part: feature:329850-330018:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342642:1:exon

XP_032305030.1
type: Protein
SIO_000068: ncbiprotein

position:329633:1
position: 329633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342642:1
position: 342642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329633-329776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329850-330018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342376-342642:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DCPS
product: decapping enzyme, scavenger, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015884006.2
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(334471..334674,334998..335143,337120..337233,340405..340515,342376..342636,342876..343056,343227..343751)
location: region:334471-343751:1
so has part: feature:334471-334674:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342876-343056:1:exon
so has part: feature:343227-343751:1:exon

position:334471:1
position: 334471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334471-334674:1:exon

position:334674:1
position: 334674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342876-343056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343227-343751:1:exon

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase isoform X5
translation: MLLIHLKKIKVTVVHPATEKHLQKYLRQEVHLIRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIHRRDVKSLRDLTAEHLPLLRNILQEGKEAITKHFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGCSVERAHLLEDVMDNLLLDAQHYQKRALTFPLRADEPLLKRFQEAGRQPGLLRGAAAGGPCAHPPSPSDPHRGVQQSPVCLLPHQGMEPLKAA
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(334653..334674,334998..335143,337120..337233,340405..340515,342376..342636,342876..343016)
location: region:334653-343016:1
so has part: feature:334653-334674:1:exon
so has part: feature:334998-335143:1:exon
so has part: feature:337120-337233:1:exon
so has part: feature:340405-340515:1:exon
so has part: feature:342376-342636:1:exon
so has part: feature:342876-343016:1:exon

XP_015739492.1
type: Protein
SIO_000068: ncbiprotein

position:334653:1
position: 334653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334653-334674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334998-335143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337120-337233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340405-340515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342376-342636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342876-343016:1:exon

ST3GAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343777..354138
location: region:343777-354138:1
so has part: feature:343777-354138:1:exon
subclass of: SO_0000010

107324198
type: Gene
SIO_000068: ncbigene

position:343777:1
position: 343777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354138:1
position: 354138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343777-354138:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_015884001.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(343777..343886,346126..346266,347714..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..353635)
location: region:343777-353635:1
so has part: feature:343777-343886:1:exon
so has part: feature:346126-346266:1:exon
so has part: feature:347714-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-353635:1:exon

position:353635:1
position: 353635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343777-343886:1:exon

position:343886:1
position: 343886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346126-346266:1:exon

position:346126:1
position: 346126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346266:1
position: 346266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347714-347792:1:exon

position:347714:1
position: 347714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347792:1
position: 347792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:350624-350702:1:exon

position:350624:1
position: 350624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350702:1
position: 350702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:351280-351349:1:exon

position:351280:1
position: 351280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351349:1
position: 351349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:351531-351611:1:exon

position:351531:1
position: 351531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351611:1
position: 351611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:351696-351793:1:exon

position:351696:1
position: 351696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351793:1
position: 351793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:351994-352054:1:exon

position:351994:1
position: 351994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352054:1
position: 352054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352255-352350:1:exon

position:352255:1
position: 352255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352350:1
position: 352350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:352441-352630:1:exon

position:352441:1
position: 352441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352630:1
position: 352630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:352746-352889:1:exon

position:352746:1
position: 352746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352889:1
position: 352889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:353047-353190:1:exon

position:353047:1
position: 353047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353190:1
position: 353190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:353267-353635:1:exon

position:353267:1
position: 353267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_015884000.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(344168..344289,346126..346266,347714..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..354138)
location: region:344168-354138:1
so has part: feature:344168-344289:1:exon
so has part: feature:346126-346266:1:exon
so has part: feature:347714-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-354138:1:exon

position:344168:1
position: 344168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344168-344289:1:exon

position:344289:1
position: 344289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346126-346266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347714-347792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350624-350702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351280-351349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351531-351611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351696-351793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:351994-352054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352255-352350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352441-352630:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:352746-352889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353047-353190:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353267-354138:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_015884002.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(344168..344289,346126..346266,347717..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..353635)
location: region:344168-353635:1
so has part: feature:344168-344289:1:exon
so has part: feature:346126-346266:1:exon
so has part: feature:347717-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-353635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344168-344289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346126-346266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347717-347792:1:exon

position:347717:1
position: 347717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:350624-350702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351280-351349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351531-351611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351696-351793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:351994-352054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352255-352350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352441-352630:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:352746-352889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353047-353190:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353267-353635:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MSKGKRSHQRDGRGREDGPVAPQPLELLPPLLAPRGRTVSGSGCDESPGPRLMPALLIKMINKSRGKILGVLALFLVMVWYSIYREDSFYFPVQENKTVCPIGEVERKAAQLIGNYTRDRPLFLQLKDFFWVRTPSLYELPYGTKGSEDVLLRLLSITSYSLPESIQSLKCRRCVVVGNGHRLRNSSMGDTINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFDPQVENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLSLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNISHEAVAIKRMLELGLLKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(346232..346266,347714..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..353353)
location: region:346232-353353:1
so has part: feature:346232-346266:1:exon
so has part: feature:347714-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-353353:1:exon

XP_015739486.1
type: Protein
SIO_000068: ncbiprotein

position:346232:1
position: 346232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353353:1
position: 353353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346232-346266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347714-347792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350624-350702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351280-351349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351531-351611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351696-351793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351994-352054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352255-352350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352441-352630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352746-352889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353047-353190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353267-353353:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MSKGKRSHQRDGRGREDGPVAPQPLELLPPLLAPRGRTVSGSGCDESPGPRLMPALLIKMINKSRGKILGVLALFLVMVWYSIYREDSFYFPVQENKTVCPIGEVERKAAQLIGNYTRDRPLFLQLKDFFWVRTPSLYELPYGTKGSEDVLLRLLSITSYSLPESIQSLKCRRCVVVGNGHRLRNSSMGDTINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFDPQVENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLSLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNISHEAVAIKRMLELGLLKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(346232..346266,347714..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..353353)
location: region:346232-353353:1
so has part: feature:346232-346266:1:exon
so has part: feature:347714-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-353353:1:exon

XP_015739487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346232-346266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347714-347792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350624-350702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351280-351349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351531-351611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351696-351793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351994-352054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352255-352350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352441-352630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352746-352889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353047-353190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353267-353353:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
translation: MSKGKRSHQRDGGREDGPVAPQPLELLPPLLAPRGRTVSGSGCDESPGPRLMPALLIKMINKSRGKILGVLALFLVMVWYSIYREDSFYFPVQENKTVCPIGEVERKAAQLIGNYTRDRPLFLQLKDFFWVRTPSLYELPYGTKGSEDVLLRLLSITSYSLPESIQSLKCRRCVVVGNGHRLRNSSMGDTINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFDPQVENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLSLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNISHEAVAIKRMLELGLLKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(346232..346266,347717..347792,350624..350702,351280..351349,351531..351611,351696..351793,351994..352054,352255..352350,352441..352630,352746..352889,353047..353190,353267..353353)
location: region:346232-353353:1
so has part: feature:346232-346266:1:exon
so has part: feature:347717-347792:1:exon
so has part: feature:350624-350702:1:exon
so has part: feature:351280-351349:1:exon
so has part: feature:351531-351611:1:exon
so has part: feature:351696-351793:1:exon
so has part: feature:351994-352054:1:exon
so has part: feature:352255-352350:1:exon
so has part: feature:352441-352630:1:exon
so has part: feature:352746-352889:1:exon
so has part: feature:353047-353190:1:exon
so has part: feature:353267-353353:1:exon

XP_015739488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346232-346266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347717-347792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350624-350702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351280-351349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351531-351611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351696-351793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351994-352054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352255-352350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352441-352630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352746-352889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353047-353190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353267-353353:1:exon

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354693..565972)
location: region:354693-565972:-1
so has part: feature:354693-565972:-1:exon
subclass of: SO_0000010

107324195
type: Gene
SIO_000068: ncbigene

position:354693:-1
position: 354693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565972:-1
position: 565972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354693-565972:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_015883993.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(354693..355493,355725..355811,357402..357511,358354..358461,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565972))
location: region:354693-565972:-1
so has part: feature:565750-565972:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:354693-355493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565972:-1:exon

position:565750:-1
position: 565750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

position:412085:-1
position: 412085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412162:-1
position: 412162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

position:395183:-1
position: 395183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395332:-1
position: 395332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

position:393460:-1
position: 393460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393609:-1
position: 393609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

position:379742:-1
position: 379742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379899:-1
position: 379899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

position:378826:-1
position: 378826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378976:-1
position: 378976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

position:376213:-1
position: 376213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376318:-1
position: 376318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

position:365414:-1
position: 365414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365562:-1
position: 365562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

position:365054:-1
position: 365054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365181:-1
position: 365181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

position:363914:-1
position: 363914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364040:-1
position: 364040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

position:360936:-1
position: 360936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361036:-1
position: 361036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

position:360631:-1
position: 360631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360829:-1
position: 360829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:358354-358461:-1:exon

position:358354:-1
position: 358354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358461:-1
position: 358461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:357402-357511:-1:exon

position:357402:-1
position: 357402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357511:-1
position: 357511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:355725-355811:-1:exon

position:355725:-1
position: 355725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355811:-1
position: 355811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:354693-355493:-1:exon

position:355493:-1
position: 355493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_015883992.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(354693..355493,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565972))
location: region:354693-565972:-1
so has part: feature:565750-565972:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:354693-355493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359867-359902:-1:exon

position:359867:-1
position: 359867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359902:-1
position: 359902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354693-355493:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_015883994.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(354693..355493,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,565750..565971))
location: region:354693-565971:-1
so has part: feature:565750-565971:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:354693-355493:-1:exon

position:565971:-1
position: 565971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:359867-359902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354693-355493:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X3
translation: MSAFQADLLLLLLACFLLSHGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGVVLWIKDGLALGIGRDLSSYPRYLVVGDHQSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGENIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGMQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSGKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(355050..355493,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,565750..565810))
location: region:355050-565810:-1
so has part: feature:565750-565810:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:355050-355493:-1:exon

XP_015739480.1
type: Protein
SIO_000068: ncbiprotein

position:355050:-1
position: 355050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565810:-1
position: 565810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:359867-359902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355050-355493:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X2
translation: MSAFQADLLLLLLACFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGVVLWIKDGLALGIGRDLSSYPRYLVVGDHQSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGENIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSGKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(355050..355493,355725..355811,357402..357511,358354..358461,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565810))
location: region:355050-565810:-1
so has part: feature:565750-565810:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:355050-355493:-1:exon

XP_015739479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355050-355493:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X1
translation: MSAFQADLLLLLLACFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGVVLWIKDGLALGIGRDLSSYPRYLVVGDHQSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGENIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGMQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSGKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(355050..355493,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565810))
location: region:355050-565810:-1
so has part: feature:565750-565810:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:355050-355493:-1:exon

XP_015739478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359867-359902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355050-355493:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032449137.1
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(355216..355510,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565972))
location: region:355216-565972:-1
so has part: feature:565750-565972:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:355216-355510:-1:exon

position:355216:-1
position: 355216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359867-359902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355216-355510:-1:exon

position:355510:-1
position: 355510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X4
translation: MSAFQADLLLLLLACFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGVVLWIKDGLALGIGRDLSSYPRYLVVGDHQSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGENIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGMQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSGKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKPSPAHRTPPTATTASTRSRSTTPLPPSHCRAALQTCGRPASSACPRACPSPTSTAH
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(355340..355510,355725..355811,357402..357511,358354..358461,359867..359902,360631..360829,360936..361036,363914..364040,365054..365181,365414..365562,376213..376318,378826..378976,379742..379899,393460..393609,395183..395332,412085..412162,565750..565810))
location: region:355340-565810:-1
so has part: feature:565750-565810:-1:exon
so has part: feature:412085-412162:-1:exon
so has part: feature:395183-395332:-1:exon
so has part: feature:393460-393609:-1:exon
so has part: feature:379742-379899:-1:exon
so has part: feature:378826-378976:-1:exon
so has part: feature:376213-376318:-1:exon
so has part: feature:365414-365562:-1:exon
so has part: feature:365054-365181:-1:exon
so has part: feature:363914-364040:-1:exon
so has part: feature:360936-361036:-1:exon
so has part: feature:360631-360829:-1:exon
so has part: feature:359867-359902:-1:exon
so has part: feature:358354-358461:-1:exon
so has part: feature:357402-357511:-1:exon
so has part: feature:355725-355811:-1:exon
so has part: feature:355340-355510:-1:exon

XP_032305028.1
type: Protein
SIO_000068: ncbiprotein

position:355340:-1
position: 355340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565750-565810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412085-412162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395183-395332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393460-393609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379742-379899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378826-378976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376213-376318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365414-365562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365054-365181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363914-364040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360936-361036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360631-360829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359867-359902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358354-358461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357402-357511:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355725-355811:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355340-355510:-1:exon

LOC107324132
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704688..708147)
location: region:704688-708147:-1
so has part: feature:704688-708147:-1:exon
subclass of: SO_0000011

107324132
type: Gene
SIO_000068: ncbigene

position:704688:-1
position: 704688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708147:-1
position: 708147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704688-708147:-1:exon

LOC107324132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107324132
product: uncharacterized LOC107324132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_001559418.1
SIO_010081: LOC107324132
subclass of: SO_0000673
so part of: LOC107324132
location: complement(join(704688..705061,707517..707637,708056..708147))
location: region:704688-708147:-1
so has part: feature:708056-708147:-1:exon
so has part: feature:707517-707637:-1:exon
so has part: feature:704688-705061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708056-708147:-1:exon

position:708056:-1
position: 708056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707517-707637:-1:exon

position:707517:-1
position: 707517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707637:-1
position: 707637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704688-705061:-1:exon

position:705061:-1
position: 705061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724872..789951)
location: region:724872-789951:-1
so has part: feature:724872-789951:-1:exon
subclass of: SO_0000010

107324235
type: Gene
SIO_000068: ncbigene

position:724872:-1
position: 724872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789951:-1
position: 789951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724872-789951:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 25 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015884071.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(724872..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,783186..783327,784797..784879,789830..789951))
location: region:724872-789951:-1
so has part: feature:789830-789951:-1:exon
so has part: feature:784797-784879:-1:exon
so has part: feature:783186-783327:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:724872-729573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789830-789951:-1:exon

position:789830:-1
position: 789830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784797-784879:-1:exon

position:784797:-1
position: 784797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784879:-1
position: 784879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783186-783327:-1:exon

position:783186:-1
position: 783186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783327:-1
position: 783327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744489-744608:-1:exon

position:744489:-1
position: 744489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744608:-1
position: 744608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:743614-743814:-1:exon

position:743614:-1
position: 743614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743814:-1
position: 743814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740714-740791:-1:exon

position:740714:-1
position: 740714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740791:-1
position: 740791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:740341-740589:-1:exon

position:740341:-1
position: 740341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740589:-1
position: 740589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:737905-738165:-1:exon

position:737905:-1
position: 737905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738165:-1
position: 738165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:729928-730046:-1:exon

position:729928:-1
position: 729928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730046:-1
position: 730046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:724872-729573:-1:exon

position:729573:-1
position: 729573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_015884070.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(724872..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,783186..783330,784797..784879,789830..789951))
location: region:724872-789951:-1
so has part: feature:789830-789951:-1:exon
so has part: feature:784797-784879:-1:exon
so has part: feature:783186-783330:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:724872-729573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789830-789951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784797-784879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783186-783330:-1:exon

position:783330:-1
position: 783330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744489-744608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:743614-743814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740714-740791:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:740341-740589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:737905-738165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729928-730046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724872-729573:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_015884072.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(729054..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,765291..765606))
location: region:729054-765606:-1
so has part: feature:765291-765606:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:729054-729573:-1:exon

position:729054:-1
position: 729054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765606:-1
position: 765606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765291-765606:-1:exon

position:765291:-1
position: 765291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744489-744608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743614-743814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740714-740791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740341-740589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737905-738165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:729928-730046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:729054-729573:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTTIGSTGPYPLARPGVMQGAGSCCEDPWMPCRLQSACCLPRTCCPPWDEAAIQEVPTGLEHYGTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNTAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTESLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(729358..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,783186..783327,784797..784868))
location: region:729358-784868:-1
so has part: feature:784797-784868:-1:exon
so has part: feature:783186-783327:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:729358-729573:-1:exon

XP_015739557.1
type: Protein
SIO_000068: ncbiprotein

position:729358:-1
position: 729358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784868:-1
position: 784868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784797-784868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783186-783327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744489-744608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743614-743814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740714-740791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740341-740589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737905-738165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:729928-730046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729358-729573:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MMSYYMDTTIGSTGPYPLARPGVMKQGAGSCCEDPWMPCRLQSACCLPRTCCPPWDEAAIQEVPTGLEHYGTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNTAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTESLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(729358..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,783186..783330,784797..784868))
location: region:729358-784868:-1
so has part: feature:784797-784868:-1:exon
so has part: feature:783186-783330:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:729358-729573:-1:exon

XP_015739556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:784797-784868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783186-783330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744489-744608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743614-743814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740714-740791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740341-740589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737905-738165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:729928-730046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729358-729573:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MKAAVDLKPTLTIIKTEKVDIDLFPSPDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNTAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTESLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(729358..729573,729928..730046,737905..738165,740341..740589,740714..740791,743614..743814,744489..744608,765291..765372))
location: region:729358-765372:-1
so has part: feature:765291-765372:-1:exon
so has part: feature:744489-744608:-1:exon
so has part: feature:743614-743814:-1:exon
so has part: feature:740714-740791:-1:exon
so has part: feature:740341-740589:-1:exon
so has part: feature:737905-738165:-1:exon
so has part: feature:729928-730046:-1:exon
so has part: feature:729358-729573:-1:exon

XP_015739558.1
type: Protein
SIO_000068: ncbiprotein

position:765372:-1
position: 765372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765291-765372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744489-744608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743614-743814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740714-740791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740341-740589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737905-738165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:729928-730046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:729358-729573:-1:exon

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 813661..895142
location: region:813661-895142:1
so has part: feature:813661-895142:1:exon
subclass of: SO_0000010

107324254
type: Gene
SIO_000068: ncbigene

position:813661:1
position: 813661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895142:1
position: 895142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813661-895142:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032449080.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(813661..814113,815785..815893,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..895142)
location: region:813661-895142:1
so has part: feature:813661-814113:1:exon
so has part: feature:815785-815893:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-895142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813661-814113:1:exon

position:814113:1
position: 814113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815785-815893:1:exon

position:815785:1
position: 815785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815893:1
position: 815893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854809-855020:1:exon

position:854809:1
position: 854809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855020:1
position: 855020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:862157-862311:1:exon

position:862157:1
position: 862157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862311:1
position: 862311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865008-865211:1:exon

position:865008:1
position: 865008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865211:1
position: 865211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870544-870612:1:exon

position:870544:1
position: 870544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870612:1
position: 870612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890515-890577:1:exon

position:890515:1
position: 890515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890577:1
position: 890577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:891849-891896:1:exon

position:891849:1
position: 891849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891896:1
position: 891896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:892654-895142:1:exon

position:892654:1
position: 892654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_015884111.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(813663..814113,815785..815866,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..895142)
location: region:813663-895142:1
so has part: feature:813663-814113:1:exon
so has part: feature:815785-815866:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-895142:1:exon

position:813663:1
position: 813663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813663-814113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815785-815866:1:exon

position:815866:1
position: 815866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892654-895142:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MFQTVPDTSSYVKVRHDSIFKQEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLAYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(815828..815893,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..893183)
location: region:815828-893183:1
so has part: feature:815828-815893:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-893183:1:exon

XP_032304971.1
type: Protein
SIO_000068: ncbiprotein

position:815828:1
position: 815828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893183:1
position: 893183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815828-815893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-893183:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLAYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(815828..815866,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..893183)
location: region:815828-893183:1
so has part: feature:815828-815866:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-893183:1:exon

XP_015739597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:815828-815866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-893183:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015884114.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(823702..824014,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..895142)
location: region:823702-895142:1
so has part: feature:823702-824014:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-895142:1:exon

position:823702:1
position: 823702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823702-824014:1:exon

position:824014:1
position: 824014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-895142:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015884113.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(825123..825238,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..895142)
location: region:825123-895142:1
so has part: feature:825123-825238:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-895142:1:exon

position:825123:1
position: 825123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825123-825238:1:exon

position:825238:1
position: 825238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-895142:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 31 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_015884112.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(825254..825652,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..895142)
location: region:825254-895142:1
so has part: feature:825254-825652:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-895142:1:exon

position:825254:1
position: 825254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825254-825652:1:exon

position:825652:1
position: 825652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-895142:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MDGTIKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLAYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(825635..825652,854809..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..893183)
location: region:825635-893183:1
so has part: feature:825635-825652:1:exon
so has part: feature:854809-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-893183:1:exon

XP_015739598.1
type: Protein
SIO_000068: ncbiprotein

position:825635:1
position: 825635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825635-825652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854809-855020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892654-893183:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLAYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(854890..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..893183)
location: region:854890-893183:1
so has part: feature:854890-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-893183:1:exon

XP_015739599.1
type: Protein
SIO_000068: ncbiprotein

position:854890:1
position: 854890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854890-855020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892654-893183:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLAYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(854890..855020,862157..862311,865008..865211,870544..870612,890515..890577,891849..891896,892654..893183)
location: region:854890-893183:1
so has part: feature:854890-855020:1:exon
so has part: feature:862157-862311:1:exon
so has part: feature:865008-865211:1:exon
so has part: feature:870544-870612:1:exon
so has part: feature:890515-890577:1:exon
so has part: feature:891849-891896:1:exon
so has part: feature:892654-893183:1:exon

XP_015739600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854890-855020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862157-862311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865008-865211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870544-870612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890515-890577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892654-893183:1:exon

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(897695..907473)
location: region:897695-907473:-1
so has part: feature:897695-907473:-1:exon
subclass of: SO_0000010

107324255
type: Gene
SIO_000068: ncbigene

position:897695:-1
position: 897695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907473:-1
position: 907473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897695-907473:-1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015884116.1
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(join(897695..900735,907386..907473))
location: region:897695-907473:-1
so has part: feature:907386-907473:-1:exon
so has part: feature:897695-900735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907386-907473:-1:exon

position:907386:-1
position: 907386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897695-900735:-1:exon

position:900735:-1
position: 900735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015884117.2
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(join(897695..900735,906961..907294))
location: region:897695-907294:-1
so has part: feature:906961-907294:-1:exon
so has part: feature:897695-900735:-1:exon

position:907294:-1
position: 907294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906961-907294:-1:exon

position:906961:-1
position: 906961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897695-900735:-1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFNYLRKRFASHVTERSRRKARLVSKDGRCNIEFGNVEQSRFVFLIDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFNPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCVTAIFLLIFQSILGVIINSFMCGAILAKISRSKNRAKTITFSRNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIEFIVDAGNENLFFISPLTIYHIIDKNSPFFHMAAETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFQNFSKTVAVEMPHCAFCLYNEKEAKAKEKKGFDNPGFVLAEASEASDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(899601..900716)
location: region:899601-900716:-1
so has part: feature:899601-900716:-1:exon

XP_015739602.1
type: Protein
SIO_000068: ncbiprotein

position:899601:-1
position: 899601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900716:-1
position: 900716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899601-900716:-1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFNYLRKRFASHVTERSRRKARLVSKDGRCNIEFGNVEQSRFVFLIDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFNPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCVTAIFLLIFQSILGVIINSFMCGAILAKISRSKNRAKTITFSRNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIEFIVDAGNENLFFISPLTIYHIIDKNSPFFHMAAETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFQNFSKTVAVEMPHCAFCLYNEKEAKAKEKKGFDNPGFVLAEASEASDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(899601..900716)
location: region:899601-900716:-1
so has part: feature:899601-900716:-1:exon

XP_015739603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:899601-900716:-1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917326..950229
location: region:917326-950229:1
so has part: feature:917326-950229:1:exon
subclass of: SO_0000010

107324305
type: Gene
SIO_000068: ncbigene

position:917326:1
position: 917326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950229:1
position: 950229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917326-950229:1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015884241.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(917326..917687,923881..924827,950109..950229)
location: region:917326-950229:1
so has part: feature:917326-917687:1:exon
so has part: feature:923881-924827:1:exon
so has part: feature:950109-950229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917326-917687:1:exon

position:917687:1
position: 917687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923881-924827:1:exon

position:923881:1
position: 923881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924827:1
position: 924827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950109-950229:1:exon

position:950109:1
position: 950109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_015884239.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(917334..917687,923881..924827,932995..933792)
location: region:917334-933792:1
so has part: feature:917334-917687:1:exon
so has part: feature:923881-924827:1:exon
so has part: feature:932995-933792:1:exon

position:917334:1
position: 917334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933792:1
position: 933792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917334-917687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923881-924827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932995-933792:1:exon

position:932995:1
position: 932995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X2
translation: MARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYVRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATALMLLLSSCNAQSMTSGIPGKAEL
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(923888..924827,950109..950182)
location: region:923888-950182:1
so has part: feature:923888-924827:1:exon
so has part: feature:950109-950182:1:exon

XP_015739727.1
type: Protein
SIO_000068: ncbiprotein

position:923888:1
position: 923888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950182:1
position: 950182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923888-924827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950109-950182:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X1
translation: MARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYVRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSSISSATVLGGVREAKTARGEEEEEEEDREPATFSGANGTAGEMKEDLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(923888..924827,932995..933341)
location: region:923888-933341:1
so has part: feature:923888-924827:1:exon
so has part: feature:932995-933341:1:exon

XP_015739725.1
type: Protein
SIO_000068: ncbiprotein

position:933341:1
position: 933341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923888-924827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932995-933341:1:exon

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960787..>983868)
location: region:960787-983868:-1
so has part: feature:960787-983868:-1:exon
subclass of: SO_0000010

107324098
type: Gene
SIO_000068: ncbigene

position:960787:-1
position: 960787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983868:-1
position: 983868
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960787-983868:-1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ARHGAP32
product: Rho GTPase activating protein 32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032449052.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(960787..967115,967530..968449,969107..969961,970280..970354,970969..971114,971854..972055,972843..972988,973899..974006,975265..975347,975928..976072,977557..977659,983694..>983868))
location: region:960787-983868:-1
so has part: feature:983694-983868:-1:exon
so has part: feature:977557-977659:-1:exon
so has part: feature:975928-976072:-1:exon
so has part: feature:975265-975347:-1:exon
so has part: feature:973899-974006:-1:exon
so has part: feature:972843-972988:-1:exon
so has part: feature:971854-972055:-1:exon
so has part: feature:970969-971114:-1:exon
so has part: feature:970280-970354:-1:exon
so has part: feature:969107-969961:-1:exon
so has part: feature:967530-968449:-1:exon
so has part: feature:960787-967115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983694-983868:-1:exon

position:983694:-1
position: 983694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977557-977659:-1:exon

position:977557:-1
position: 977557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977659:-1
position: 977659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975928-976072:-1:exon

position:975928:-1
position: 975928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976072:-1
position: 976072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:975265-975347:-1:exon

position:975265:-1
position: 975265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975347:-1
position: 975347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:973899-974006:-1:exon

position:973899:-1
position: 973899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974006:-1
position: 974006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:972843-972988:-1:exon

position:972843:-1
position: 972843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972988:-1
position: 972988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971854-972055:-1:exon

position:971854:-1
position: 971854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972055:-1
position: 972055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:970969-971114:-1:exon

position:970969:-1
position: 970969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971114:-1
position: 971114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:970280-970354:-1:exon

position:970280:-1
position: 970280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970354:-1
position: 970354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:969107-969961:-1:exon

position:969107:-1
position: 969107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969961:-1
position: 969961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:967530-968449:-1:exon

position:967530:-1
position: 967530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968449:-1
position: 968449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:960787-967115:-1:exon

position:967115:-1
position: 967115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ARHGAP32
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(969540..969542),aa:OTHER)
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 32
translation: NELVSLFCCAVPKKRGKLIPFLRSLVKARPRRATEPEPKKEGVFGCDLGEHLLRSGRDVPQVLQSCSEFIEQHGVVQGIYRLSGVASKIQRLRHEFDSEQIPDLTKDNYIRDIHSVSSLCKMYFRELPNPLLTTQLYDKFTDAAGAATEEERMVRMKDAIQQLPAPHYRTLEYLMRHLASLAGNSSVTNMDAHNLAIVWAPNLLRSQQSQSACASGEAACMELQTQTAVVEFLISHTDGLFGSKSTSAMGEGAGHSSLSRPKSVWVSPLSTKLLTLQEAQAERRGQSSSPTVTRSSRIQVKEGPAAVLGRFHTVINFSSERPSSPSKRAESPAGSWCSCFCLRRPSPVAEHQLQSSAREPSEAEVVVLAGGRGDSGTLRSAKSEESLTSLHAVDGESSPCEPTRARPSGDVQCVSINGELMGSTNRCNSNDSLPYDISDGEKEVIIVQAIISPSSAEAADLSLPETTDTSLDCDPMPSQCSPAQAQPECPDSSTTMQAQVSVTEEKPSLLEGDLESGLQSQAPGNSTSSEPLSPXQQRMSPIFPPDLSPTEEKTFKPSDTSPQMGKKPIKSPPLTTSEPVSFALPSCTSESIGGMLITTRNSSTSNWSEEIGITEITNRFPTQMSLPLKEIERAAEEEAHQELKHAQIVAAGKPELPEEGERPMSSSQNKTVPSGHAQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASAQSQKKPGDAHSESNSYGETEAATALEKLHLSAGAPDKLHLYTDLPESQLHFQTSAPVEQDFQASSTAREQNHPPGAPGSQDPQPLHTSVPGDMPARRDAEQEQPSYLAGQMENKEQLPAHAEDWEQTRQHAPGALPDWEPPAPDLPMDKPHVRACTSGDKQLTSTCASDDKLETPVTAGEKSTPVPVPYLTTIQTAAAAEPNRAPTCQHAAGPAIIQADVTGTAAQRTPTSSQPTPPQRQDHQSAVGQVPAASAKASSNSSQAWGAAAPEKPPEPAPGFATESTSSTHRSSSVPSSHQSRLEKPRESTRAPLLHLRSESVPAHSSYGFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLASSMLASSVEEVLLPPPAPPPPPLPPPPLAPPPPPPPPPKHASLQSVYVPHPKPESILEPSGPDVYLHHKPTSIHQFRPESVPPHMTYHNKPDQHPAYPPRSETPTSAGTRYNTYANQGRSASAVYSKPRSRMEFVSSVSPTGLRNATYAEDPPPYPTIRRVQSLHVPTPAASAIRSVPISRTEVPPDDEPLFCPRPLYQFKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTSADGNFYDLDPYSTMRVRPFHPLHSRDFTSYEARLHSKGLYRHPSLSAYPRGGLIGHLAGKEHSFISRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKMKGPLMSQYDNVTPLLPEDPGGPDIIHLRSKSDPGKSGLLTVAEGKEGKYPAKAATPDGDERYYMQHPEPDLDRAHYHGAYGNGQPEKPSLPQKQSSIRSRKVHEPTCSASDHRPHLQQEPSHRQPSEPKNGPPYPDYRPKGPEPAEPMGYQHLGRKYFLANQDTLRLNHKEVRLADDRPDLERSRARPSTSIEKHSRDGYKEEEHTASPMAPPPSPERSHSLRVQHRESVEKDPALFYPFQTLGKRQSTMTVMSQYDNVEDYHTMPQHQRGGYAGEGGCVPPAFTHVHSRIYATALGQGAFLPTELCLQRPETEVHVE
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(964815..967115,967530..968449,969107..969961,970280..970354,970969..971114,971854..972055,972843..972988,973899..974006,975265..975347,975928..976072,977557..977659,983694..>983868))
location: region:964815-983868:-1
so has part: feature:983694-983868:-1:exon
so has part: feature:977557-977659:-1:exon
so has part: feature:975928-976072:-1:exon
so has part: feature:975265-975347:-1:exon
so has part: feature:973899-974006:-1:exon
so has part: feature:972843-972988:-1:exon
so has part: feature:971854-972055:-1:exon
so has part: feature:970969-971114:-1:exon
so has part: feature:970280-970354:-1:exon
so has part: feature:969107-969961:-1:exon
so has part: feature:967530-968449:-1:exon
so has part: feature:964815-967115:-1:exon

XP_032304943.1
type: Protein
SIO_000068: ncbiprotein

position:964815:-1
position: 964815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983694-983868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977557-977659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975928-976072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:975265-975347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973899-974006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972843-972988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971854-972055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:970969-971114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970280-970354:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:969107-969961:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:967530-968449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:964815-967115:-1:exon

LOC116654368
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991570..1003358)
location: region:991570-1003358:-1
so has part: feature:991570-1003358:-1:exon
subclass of: SO_0000011

116654368
type: Gene
SIO_000068: ncbigene

position:991570:-1
position: 991570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003358:-1
position: 1003358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991570-1003358:-1:exon

LOC116654368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654368
product: uncharacterized LOC116654368
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004309565.1
SIO_010081: LOC116654368
subclass of: SO_0000673
so part of: LOC116654368
location: complement(join(991570..992888,992975..999452,1003275..1003358))
location: region:991570-1003358:-1
so has part: feature:1003275-1003358:-1:exon
so has part: feature:992975-999452:-1:exon
so has part: feature:991570-992888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003275-1003358:-1:exon

position:1003275:-1
position: 1003275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:992975-999452:-1:exon

position:992975:-1
position: 992975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999452:-1
position: 999452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:991570-992888:-1:exon

position:992888:-1
position: 992888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116654367
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1003952..1006058)
location: region:1003952-1006058:-1
so has part: feature:1003952-1006058:-1:exon
subclass of: SO_0000011

116654367
type: Gene
SIO_000068: ncbigene

position:1003952:-1
position: 1003952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006058:-1
position: 1006058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003952-1006058:-1:exon

LOC116654367
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654367
product: uncharacterized LOC116654367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004309564.1
SIO_010081: LOC116654367
subclass of: SO_0000673
so part of: LOC116654367
location: complement(join(1003952..1004084,1004823..1004915,1005880..1006058))
location: region:1003952-1006058:-1
so has part: feature:1005880-1006058:-1:exon
so has part: feature:1004823-1004915:-1:exon
so has part: feature:1003952-1004084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1005880-1006058:-1:exon

position:1005880:-1
position: 1005880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004823-1004915:-1:exon

position:1004823:-1
position: 1004823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004915:-1
position: 1004915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003952-1004084:-1:exon

position:1004084:-1
position: 1004084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324097
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1027134..1091925)
location: region:1027134-1091925:-1
so has part: feature:1027134-1091925:-1:exon
subclass of: SO_0000010

107324097
type: Gene
SIO_000068: ncbigene

position:1027134:-1
position: 1027134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091925:-1
position: 1091925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027134-1091925:-1:exon

LOC107324097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324097
product: rho GTPase-activating protein 32-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032449063.1
SIO_010081: LOC107324097
subclass of: SO_0000673
so part of: LOC107324097
location: complement(join(1027134..1030730,1035092..1035176,1035545..1035586,1036595..1036686,1045958..1046066,1091843..1091925))
location: region:1027134-1091925:-1
so has part: feature:1091843-1091925:-1:exon
so has part: feature:1045958-1046066:-1:exon
so has part: feature:1036595-1036686:-1:exon
so has part: feature:1035545-1035586:-1:exon
so has part: feature:1035092-1035176:-1:exon
so has part: feature:1027134-1030730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1091843-1091925:-1:exon

position:1091843:-1
position: 1091843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045958-1046066:-1:exon

position:1045958:-1
position: 1045958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046066:-1
position: 1046066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1036595-1036686:-1:exon

position:1036595:-1
position: 1036595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036686:-1
position: 1036686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1035545-1035586:-1:exon

position:1035545:-1
position: 1035545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035586:-1
position: 1035586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1035092-1035176:-1:exon

position:1035092:-1
position: 1035092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035176:-1
position: 1035176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1027134-1030730:-1:exon

position:1030730:-1
position: 1030730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107324097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32-like
translation: MMKSSLHSEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPDITGELPLRTCGSTASMKVKNVKKYINPGLMGCDAFHRLSFTKGHFPKMAECAHFHYENVDFGNIQELKNLQSKPDDLLWDVFLRCETSCSHLKFVLLKYFVSHKELLWGACLDPHPSAQSPIGCSSG
SIO_010081: LOC107324097
subclass of: SO_0000673
so part of: LOC107324097
location: complement(join(1030542..1030730,1035092..1035176,1035545..1035586,1036595..1036686,1045958..1046065))
location: region:1030542-1046065:-1
so has part: feature:1045958-1046065:-1:exon
so has part: feature:1036595-1036686:-1:exon
so has part: feature:1035545-1035586:-1:exon
so has part: feature:1035092-1035176:-1:exon
so has part: feature:1030542-1030730:-1:exon

XP_032304954.1
type: Protein
SIO_000068: ncbiprotein

position:1030542:-1
position: 1030542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046065:-1
position: 1046065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045958-1046065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036595-1036686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1035545-1035586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1035092-1035176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030542-1030730:-1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1113851..1137408
location: region:1113851-1137408:1
so has part: feature:1113851-1137408:1:exon
subclass of: SO_0000010

107324304
type: Gene
SIO_000068: ncbigene

position:1113851:1
position: 1113851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137408:1
position: 1137408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113851-1137408:1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BARX2
product: BARX homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_015884237.2
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1113851..1114356,1132518..1132812,1135294..1135378,1136112..1137408)
location: region:1113851-1137408:1
so has part: feature:1113851-1114356:1:exon
so has part: feature:1132518-1132812:1:exon
so has part: feature:1135294-1135378:1:exon
so has part: feature:1136112-1137408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113851-1114356:1:exon

position:1114356:1
position: 1114356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132518-1132812:1:exon

position:1132518:1
position: 1132518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132812:1
position: 1132812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135294-1135378:1:exon

position:1135294:1
position: 1135294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135378:1
position: 1135378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1136112-1137408:1:exon

position:1136112:1
position: 1136112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2 isoform X1
translation: MHCPPQPRLAKAGRRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLLVRPKPLHSCAGSPSLRAYPLISVITRQPSVVPHLVPAATSSRVLPAQTSATASSETPASETHGSSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQEEGSQAPEEPKVTEEKPEVSLETEESPEHIPEPSSEEATPLS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1114185..1114356,1132518..1132812,1135294..1135378,1136112..1136360)
location: region:1114185-1136360:1
so has part: feature:1114185-1114356:1:exon
so has part: feature:1132518-1132812:1:exon
so has part: feature:1135294-1135378:1:exon
so has part: feature:1136112-1136360:1:exon

XP_015739723.1
type: Protein
SIO_000068: ncbiprotein

position:1114185:1
position: 1114185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136360:1
position: 1136360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114185-1114356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132518-1132812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135294-1135378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136112-1136360:1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BARX2
product: BARX homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_015884238.2
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1121790..1121990,1132518..1132812,1135294..1135378,1136112..1137408)
location: region:1121790-1137408:1
so has part: feature:1121790-1121990:1:exon
so has part: feature:1132518-1132812:1:exon
so has part: feature:1135294-1135378:1:exon
so has part: feature:1136112-1137408:1:exon

position:1121790:1
position: 1121790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121790-1121990:1:exon

position:1121990:1
position: 1121990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132518-1132812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135294-1135378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136112-1137408:1:exon

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2 isoform X2
translation: MWVRDASTIIHHTGSPSLRAYPLISVITRQPSVVPHLVPAATSSRVLPAQTSATASSETPASETHGSSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQEEGSQAPEEPKVTEEKPEVSLETEESPEHIPEPSSEEATPLS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1121951..1121990,1132518..1132812,1135294..1135378,1136112..1136360)
location: region:1121951-1136360:1
so has part: feature:1121951-1121990:1:exon
so has part: feature:1132518-1132812:1:exon
so has part: feature:1135294-1135378:1:exon
so has part: feature:1136112-1136360:1:exon

XP_015739724.1
type: Protein
SIO_000068: ncbiprotein

position:1121951:1
position: 1121951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121951-1121990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132518-1132812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135294-1135378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136112-1136360:1:exon

TMEM45B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1172263..1179504
location: region:1172263-1179504:1
so has part: feature:1172263-1179504:1:exon
subclass of: SO_0000010

107324302
type: Gene
SIO_000068: ncbigene

position:1172263:1
position: 1172263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179504:1
position: 1179504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172263-1179504:1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015884230.2
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1172263..1172440,1176117..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1179504)
location: region:1172263-1179504:1
so has part: feature:1172263-1172440:1:exon
so has part: feature:1176117-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1179504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172263-1172440:1:exon

position:1172440:1
position: 1172440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176117-1176314:1:exon

position:1176117:1
position: 1176117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176314:1
position: 1176314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1176603-1176815:1:exon

position:1176603:1
position: 1176603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176815:1
position: 1176815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1177364-1177548:1:exon

position:1177364:1
position: 1177364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177548:1
position: 1177548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1178431-1178576:1:exon

position:1178431:1
position: 1178431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178576:1
position: 1178576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1178836-1179504:1:exon

position:1178836:1
position: 1178836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X2
translation: MKMFGDPLHYCSTWGMGMMPCAPCSLHRVGDAAIWRRISEDLVSMASFKGHALPGSFFLIFGLWWSVKYPLRYLSQKASKKSQKNYCFQRLDAIEGGVKITFALIGMLAEQFTPSGPHLYLYSGEKRDWVKLMNWQHTTMYLFYGLSGVVDIFTYVCPMVPRGLDRLMLSVAVFVEGCLFYYHVLHRPMLDQHIHSLLLIAIFLGACSTMLEVFLRDNIVLEMFRAGIAIVQGTWFWQVGVVLFRPWGGPVWDESDHSNIMFLTMCFFWHWAAAVVILTVNYSIAYSCVQRCGRGSGEPYISLGVRKQKDNMGSQAAFLNGSDDE
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1172323..1172440,1176117..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1178953)
location: region:1172323-1178953:1
so has part: feature:1172323-1172440:1:exon
so has part: feature:1176117-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1178953:1:exon

XP_015739716.1
type: Protein
SIO_000068: ncbiprotein

position:1172323:1
position: 1172323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178953:1
position: 1178953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172323-1172440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176117-1176314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176603-1176815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177364-1177548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178431-1178576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178836-1178953:1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015884232.2
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1172573..1172670,1176117..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1179504)
location: region:1172573-1179504:1
so has part: feature:1172573-1172670:1:exon
so has part: feature:1176117-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1179504:1:exon

position:1172573:1
position: 1172573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172573-1172670:1:exon

position:1172670:1
position: 1172670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176117-1176314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176603-1176815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177364-1177548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178431-1178576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178836-1179504:1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032449099.1
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1175067..1175157,1176117..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1179504)
location: region:1175067-1179504:1
so has part: feature:1175067-1175157:1:exon
so has part: feature:1176117-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1179504:1:exon

position:1175067:1
position: 1175067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175067-1175157:1:exon

position:1175157:1
position: 1175157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176117-1176314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176603-1176815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177364-1177548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178431-1178576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178836-1179504:1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X1
translation: MASFKGHALPGSFFLIFGLWWSVKYPLRYLSQKASKKSQKNYCFQRLDAIEGGVKITFALIGMLAEQFTPSGPHLYLYSGEKRDWVKLMNWQHTTMYLFYGLSGVVDIFTYVCPMVPRGLDRLMLSVAVFVEGCLFYYHVLHRPMLDQHIHSLLLIAIFLGACSTMLEVFLRDNIVLEMFRAGIAIVQGTWFWQVGVVLFRPWGGPVWDESDHSNIMFLTMCFFWHWAAAVVILTVNYSIAYSCVQRCGRGSGEPYISLGVRKQKDNMGSQAAFLNGSDDE
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1176131..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1178953)
location: region:1176131-1178953:1
so has part: feature:1176131-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1178953:1:exon

XP_015739718.1
type: Protein
SIO_000068: ncbiprotein

position:1176131:1
position: 1176131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176131-1176314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176603-1176815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177364-1177548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178431-1178576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178836-1178953:1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X1
translation: MASFKGHALPGSFFLIFGLWWSVKYPLRYLSQKASKKSQKNYCFQRLDAIEGGVKITFALIGMLAEQFTPSGPHLYLYSGEKRDWVKLMNWQHTTMYLFYGLSGVVDIFTYVCPMVPRGLDRLMLSVAVFVEGCLFYYHVLHRPMLDQHIHSLLLIAIFLGACSTMLEVFLRDNIVLEMFRAGIAIVQGTWFWQVGVVLFRPWGGPVWDESDHSNIMFLTMCFFWHWAAAVVILTVNYSIAYSCVQRCGRGSGEPYISLGVRKQKDNMGSQAAFLNGSDDE
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1176131..1176314,1176603..1176815,1177364..1177548,1178431..1178576,1178836..1178953)
location: region:1176131-1178953:1
so has part: feature:1176131-1176314:1:exon
so has part: feature:1176603-1176815:1:exon
so has part: feature:1177364-1177548:1:exon
so has part: feature:1178431-1178576:1:exon
so has part: feature:1178836-1178953:1:exon

XP_032304990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176131-1176314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176603-1176815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177364-1177548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178431-1178576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178836-1178953:1:exon

LOC107324303
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107324303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1179612..1186927
location: region:1179612-1186927:1
so has part: feature:1179612-1186927:1:exon
subclass of: SO_0000010

107324303
type: Gene
SIO_000068: ncbigene

position:1179612:1
position: 1179612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186927:1
position: 1186927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179612-1186927:1:exon

LOC107324303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324303
product: transmembrane protein 45B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015884233.2
SIO_010081: LOC107324303
subclass of: SO_0000673
so part of: LOC107324303
location: join(1179612..1182659,1184846..1185050,1185265..1185477,1185567..1185751,1186140..1186285,1186434..1186927)
location: region:1179612-1186927:1
so has part: feature:1179612-1182659:1:exon
so has part: feature:1184846-1185050:1:exon
so has part: feature:1185265-1185477:1:exon
so has part: feature:1185567-1185751:1:exon
so has part: feature:1186140-1186285:1:exon
so has part: feature:1186434-1186927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179612-1182659:1:exon

position:1182659:1
position: 1182659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184846-1185050:1:exon

position:1184846:1
position: 1184846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185050:1
position: 1185050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185265-1185477:1:exon

position:1185265:1
position: 1185265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185477:1
position: 1185477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1185567-1185751:1:exon

position:1185567:1
position: 1185567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185751:1
position: 1185751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1186140-1186285:1:exon

position:1186140:1
position: 1186140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186285:1
position: 1186285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1186434-1186927:1:exon

position:1186434:1
position: 1186434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107324303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107324303
product: transmembrane protein 45B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015884234.2
SIO_010081: LOC107324303
subclass of: SO_0000673
so part of: LOC107324303
location: join(1182696..1185050,1185265..1185477,1185567..1185751,1186140..1186285,1186434..1186927)
location: region:1182696-1186927:1
so has part: feature:1182696-1185050:1:exon
so has part: feature:1185265-1185477:1:exon
so has part: feature:1185567-1185751:1:exon
so has part: feature:1186140-1186285:1:exon
so has part: feature:1186434-1186927:1:exon

position:1182696:1
position: 1182696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182696-1185050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185265-1185477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185567-1185751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186140-1186285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186434-1186927:1:exon

LOC107324303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B-like
translation: MPTSFLGCALRGTFFLIFGLWWSVRYPLKYLRRKTNAENQPSYGLQRVEVFEGAIKAFFALAGILVEQFVPSGPHLMLYSPKTHSWTDLTHWHYTTMYLFFLLSGIVDVVSHSPLKLPLGLDRLSLSVALFMEGLLFCFHDYGDAALDQHLHSLMAFAIFAGALCVLLEVFIRDHIILECLRTSTFLLQGSWLWQIGFVLSPPWGGPGWDQTDSSNFSFLTMCFCWHYAGALFTLAANAAASRCCNESCQLRFGDIDVELDCGLCLRKKGSGGALLPEGGTEEK
SIO_010081: LOC107324303
subclass of: SO_0000673
so part of: LOC107324303
location: join(1184864..1185050,1185265..1185477,1185567..1185751,1186140..1186285,1186434..1186557)
location: region:1184864-1186557:1
so has part: feature:1184864-1185050:1:exon
so has part: feature:1185265-1185477:1:exon
so has part: feature:1185567-1185751:1:exon
so has part: feature:1186140-1186285:1:exon
so has part: feature:1186434-1186557:1:exon

XP_015739719.1
type: Protein
SIO_000068: ncbiprotein

position:1184864:1
position: 1184864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186557:1
position: 1186557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184864-1185050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185265-1185477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185567-1185751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186140-1186285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186434-1186557:1:exon

LOC107324303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107324303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B-like
translation: MPTSFLGCALRGTFFLIFGLWWSVRYPLKYLRRKTNAENQPSYGLQRVEVFEGAIKAFFALAGILVEQFVPSGPHLMLYSPKTHSWTDLTHWHYTTMYLFFLLSGIVDVVSHSPLKLPLGLDRLSLSVALFMEGLLFCFHDYGDAALDQHLHSLMAFAIFAGALCVLLEVFIRDHIILECLRTSTFLLQGSWLWQIGFVLSPPWGGPGWDQTDSSNFSFLTMCFCWHYAGALFTLAANAAASRCCNESCQLRFGDIDVELDCGLCLRKKGSGGALLPEGGTEEK
SIO_010081: LOC107324303
subclass of: SO_0000673
so part of: LOC107324303
location: join(1184864..1185050,1185265..1185477,1185567..1185751,1186140..1186285,1186434..1186557)
location: region:1184864-1186557:1
so has part: feature:1184864-1185050:1:exon
so has part: feature:1185265-1185477:1:exon
so has part: feature:1185567-1185751:1:exon
so has part: feature:1186140-1186285:1:exon
so has part: feature:1186434-1186557:1:exon

XP_015739720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1184864-1185050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185265-1185477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185567-1185751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186140-1186285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186434-1186557:1:exon

APLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1188778..1222115)
location: region:1188778-1222115:-1
so has part: feature:1188778-1222115:-1:exon
subclass of: SO_0000010

107324180
type: Gene
SIO_000068: ncbigene

position:1188778:-1
position: 1188778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222115:-1
position: 1222115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188778-1222115:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_015883969.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1188778..1190335,1191102..1191257,1191699..1191773,1192576..1192658,1194745..1194780,1195377..1195547,1196098..1196197,1197423..1197551,1197958..1198116,1198929..1199003,1199211..1199326,1203133..1203350,1203865..1204040,1205530..1205642,1208165..1208294,1209280..1209453,1221957..1222115))
location: region:1188778-1222115:-1
so has part: feature:1221957-1222115:-1:exon
so has part: feature:1209280-1209453:-1:exon
so has part: feature:1208165-1208294:-1:exon
so has part: feature:1205530-1205642:-1:exon
so has part: feature:1203865-1204040:-1:exon
so has part: feature:1203133-1203350:-1:exon
so has part: feature:1199211-1199326:-1:exon
so has part: feature:1198929-1199003:-1:exon
so has part: feature:1197958-1198116:-1:exon
so has part: feature:1197423-1197551:-1:exon
so has part: feature:1196098-1196197:-1:exon
so has part: feature:1195377-1195547:-1:exon
so has part: feature:1194745-1194780:-1:exon
so has part: feature:1192576-1192658:-1:exon
so has part: feature:1191699-1191773:-1:exon
so has part: feature:1191102-1191257:-1:exon
so has part: feature:1188778-1190335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221957-1222115:-1:exon

position:1221957:-1
position: 1221957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209280-1209453:-1:exon

position:1209280:-1
position: 1209280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209453:-1
position: 1209453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208165-1208294:-1:exon

position:1208165:-1
position: 1208165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208294:-1
position: 1208294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205530-1205642:-1:exon

position:1205530:-1
position: 1205530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205642:-1
position: 1205642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1203865-1204040:-1:exon

position:1203865:-1
position: 1203865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204040:-1
position: 1204040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1203133-1203350:-1:exon

position:1203133:-1
position: 1203133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203350:-1
position: 1203350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1199211-1199326:-1:exon

position:1199211:-1
position: 1199211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199326:-1
position: 1199326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1198929-1199003:-1:exon

position:1198929:-1
position: 1198929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199003:-1
position: 1199003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1197958-1198116:-1:exon

position:1197958:-1
position: 1197958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198116:-1
position: 1198116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1197423-1197551:-1:exon

position:1197423:-1
position: 1197423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197551:-1
position: 1197551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1196098-1196197:-1:exon

position:1196098:-1
position: 1196098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196197:-1
position: 1196197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1195377-1195547:-1:exon

position:1195377:-1
position: 1195377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195547:-1
position: 1195547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1194745-1194780:-1:exon