Coturnix japonica isolate 7356 chromosome 16, Coturnix japonica 2.1, whole genome shotgun sequence.
type: Entry
definition: Coturnix japonica isolate 7356 chromosome 16, Coturnix japonica 2.1, whole genome shotgun sequence.
sequence version: NC_029531.1
sequence date: 2020-02-18
sequence: sequence
division: CON
label: NC_029531.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA314147
dblink: SAMN03989050
keyword: WGS
keyword: RefSeq
source: Coturnix japonica (Japanese quail)
organism: Coturnix japonica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003796.1.\nAssembly name: Coturnix japonica 2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The International Quail Genome\nConsortium on 2016/03/01. The original whole-genome shotgun project\nhas the accession LSZS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: McDonnell Genome Institute - Washington\n University School of Medicine\nAssembly Method :: ALLPATHS-LG v. 4.7.0\nAssembly Name :: Coturnix japonica 2.1\nGenome Coverage :: 73X\nSequencing Technology :: Illumina GA IIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Coturnix japonica Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 344938
topology: linear
so has quality: SO_0000987
location: 1..344938
location: region:1-344938:1
RO_0002162: 93934

NC_029531
type: RefSeq
SIO_000068: refseq

PRJNA314147
type: BioProject
SIO_000068: bioproject

SAMN03989050
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344938:1
position: 344938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-344938:1:source
so part of: sequence
organism: Coturnix japonica
mol type: genomic DNA
isolate: 7356
chromosome: 16
sex: male
tissue type: blood
country: France: Tours, INRA PEAT

93934
type: Taxonomy
SIO_000068: taxonomy

LOC107321528
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <52..1157
location: region:52-1157:1
so has part: feature:52-1157:1:exon
subclass of: SO_0000010

107321528
type: Gene
SIO_000068: ncbigene

position:52:1
position: 52
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1157:1
position: 1157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52-1157:1:exon

LOC107321528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321528
product: outer dense fiber protein 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_015878525.1
SIO_010081: LOC107321528
subclass of: SO_0000673
so part of: LOC107321528
location: join(<52..152,332..453,621..760,915..1157)
location: region:52-1157:1
so has part: feature:52-152:1:exon
so has part: feature:332-453:1:exon
so has part: feature:621-760:1:exon
so has part: feature:915-1157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52-152:1:exon

position:152:1
position: 152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:332-453:1:exon

position:332:1
position: 332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453:1
position: 453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621-760:1:exon

position:621:1
position: 621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760:1
position: 760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:915-1157:1:exon

position:915:1
position: 915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321528
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: LOW QUALITY PROTEIN: outer dense fiber protein 3-like
translation: GDYRTEAANKHVFKCPRAVHGLPAEPLRTDRPPGPGTYTLPRLMGPNTAYTSASPCYSMRGRSQRGRFDEDLAKTPGPAALPXVAVDVYKKRAPAYTMAARPKHGEGKAVKPGPADYNVGQVTLIKPQAPASTFGIRHSLYTTPLIVE
SIO_010081: LOC107321528
subclass of: SO_0000673
so part of: LOC107321528
location: join(<52..152,332..453,621..760,915..998)
location: region:52-998:1
so has part: feature:52-152:1:exon
so has part: feature:332-453:1:exon
so has part: feature:621-760:1:exon
so has part: feature:915-998:1:exon

XP_015734011.1
type: Protein
SIO_000068: ncbiprotein

position:998:1
position: 998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52-152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332-453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621-760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915-998:1:exon

LOC107321561
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2513..5673
location: region:2513-5673:1
so has part: feature:2513-5673:1:exon
subclass of: SO_0000010

107321561
type: Gene
SIO_000068: ncbigene

position:2513:1
position: 2513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5673:1
position: 5673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2513-5673:1:exon

LOC107321561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321561
product: antigen-presenting glycoprotein CD1d-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032447980.1
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2513..3032,3219..3467,4323..5137,5212..5673)
location: region:2513-5673:1
so has part: feature:2513-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-5137:1:exon
so has part: feature:5212-5673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2513-3032:1:exon

position:3032:1
position: 3032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

position:3219:1
position: 3219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3467:1
position: 3467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4323-5137:1:exon

position:4323:1
position: 4323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5137:1
position: 5137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5212-5673:1:exon

position:5212:1
position: 5212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321561
product: antigen-presenting glycoprotein CD1d-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015878581.2
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2513..3032,3219..3467,4323..4604,4686..5137,5212..5673)
location: region:2513-5673:1
so has part: feature:2513-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4604:1:exon
so has part: feature:4686-5137:1:exon
so has part: feature:5212-5673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2513-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4604:1:exon

position:4604:1
position: 4604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4686-5137:1:exon

position:4686:1
position: 4686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5212-5673:1:exon

LOC107321561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321561
product: antigen-presenting glycoprotein CD1d-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032447981.1
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2513..3032,3219..3467,4323..4958,5047..5137,5212..5424)
location: region:2513-5424:1
so has part: feature:2513-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4958:1:exon
so has part: feature:5047-5137:1:exon
so has part: feature:5212-5424:1:exon

position:5424:1
position: 5424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2513-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4958:1:exon

position:4958:1
position: 4958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5047-5137:1:exon

position:5047:1
position: 5047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5212-5424:1:exon

LOC107321561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321561
product: antigen-presenting glycoprotein CD1d-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015878582.2
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2513..3032,3219..3467,4323..4604,4686..4958,5047..5137,5212..5424)
location: region:2513-5424:1
so has part: feature:2513-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4604:1:exon
so has part: feature:4686-4958:1:exon
so has part: feature:5047-5137:1:exon
so has part: feature:5212-5424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2513-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686-4958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5047-5137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5212-5424:1:exon

LOC107321561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X1
translation: MQPHAILLLLFFFFPGNWAEPEGSYMLKLLHFATFQNSTSVLVGGVGLLGDMELGSLDISTGNIHYYRAWLRPALPKEDWDVIESSIKSYIRDFNRLVEMYATMPYPFVFQTSVGCELQSNRTVRTFFNIAYEGQNFIRFCLDTGTWEQMQHNQLSATAEQLMANASTLNEVIQVLLNYTCVDVLRLFIRAGKADLERQGELTHISSRRRGGLSGAALQSPHIHPSVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGQELPPNTSTVLPNADLTYQLRSTLLVSPRDGHSYACRVQHRSLGDRSLLVPWGRLSPSGDAAPEPRFLGTRSRRADGLFVVRALQEGTECGDRGRPAAGRGRHGRTVGTEIQEAAADGRGAQRPTGGDHGGAIRGMRPRNSRGGEGARLSASQNPPVLVAAPPAPIKEPTCPRVTNRDLPSAPSAFYRPTTAFINPLPEIFVQIFVQTLPPATPTDGAGCAELH
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2966..3032,3219..3467,4323..5137,5212..5550)
location: region:2966-5550:1
so has part: feature:2966-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-5137:1:exon
so has part: feature:5212-5550:1:exon

XP_032303871.1
type: Protein
SIO_000068: ncbiprotein

position:2966:1
position: 2966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550:1
position: 5550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2966-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-5137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5212-5550:1:exon

LOC107321561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X2
translation: MQPHAILLLLFFFFPGNWAEPEGSYMLKLLHFATFQNSTSVLVGGVGLLGDMELGSLDISTGNIHYYRAWLRPALPKEDWDVIESSIKSYIRDFNRLVEMYATMPYPFVFQTSVGCELQSNRTVRTFFNIAYEGQNFIRFCLDTGTWEQMQHNQLSATAEQLMANASTLNEVIQVLLNYTCVDVLRLFIRAGKADLERQVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGQELPPNTSTVLPNADLTYQLRSTLLVSPRDGHSYACRVQHRSLGDRSLLVPWGRLSPSGDAAPEPRFLGTRSRRADGLFVVRALQEGTECGDRGRPAAGRGRHGRTVGTEIQEAAADGRGAQRPTGGDHGGAIRGMRPRNSRGGEGARLSASQNPPVLVAAPPAPIKEPTCPRVTNRDLPSAPSAFYRPTTAFINPLPEIFVQIFVQTLPPATPTDGAGCAELH
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2966..3032,3219..3467,4323..4604,4686..5137,5212..5550)
location: region:2966-5550:1
so has part: feature:2966-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4604:1:exon
so has part: feature:4686-5137:1:exon
so has part: feature:5212-5550:1:exon

XP_015734067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2966-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686-5137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5212-5550:1:exon

LOC107321561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X3
translation: MQPHAILLLLFFFFPGNWAEPEGSYMLKLLHFATFQNSTSVLVGGVGLLGDMELGSLDISTGNIHYYRAWLRPALPKEDWDVIESSIKSYIRDFNRLVEMYATMPYPFVFQTSVGCELQSNRTVRTFFNIAYEGQNFIRFCLDTGTWEQMQHNQLSATAEQLMANASTLNEVIQVLLNYTCVDVLRLFIRAGKADLERQGELTHISSRRRGGLSGAALQSPHIHPSVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGQELPPNTSTVLPNADLTYQLRSTLLVSPRDGHSYACRVQHRSLGDRSLLVPWERSKRGLSAGIGAVLLLAAAAMAALLVRRYRKRQRMDEGRSVPLAETTAGRYGGCGRGTAGEGRGHV
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2966..3032,3219..3467,4323..4958,5047..5137,5212..5323)
location: region:2966-5323:1
so has part: feature:2966-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4958:1:exon
so has part: feature:5047-5137:1:exon
so has part: feature:5212-5323:1:exon

XP_032303872.1
type: Protein
SIO_000068: ncbiprotein

position:5323:1
position: 5323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2966-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5047-5137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5212-5323:1:exon

LOC107321561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X4
translation: MQPHAILLLLFFFFPGNWAEPEGSYMLKLLHFATFQNSTSVLVGGVGLLGDMELGSLDISTGNIHYYRAWLRPALPKEDWDVIESSIKSYIRDFNRLVEMYATMPYPFVFQTSVGCELQSNRTVRTFFNIAYEGQNFIRFCLDTGTWEQMQHNQLSATAEQLMANASTLNEVIQVLLNYTCVDVLRLFIRAGKADLERQVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGQELPPNTSTVLPNADLTYQLRSTLLVSPRDGHSYACRVQHRSLGDRSLLVPWERSKRGLSAGIGAVLLLAAAAMAALLVRRYRKRQRMDEGRSVPLAETTAGRYGGCGRGTAGEGRGHV
SIO_010081: LOC107321561
subclass of: SO_0000673
so part of: LOC107321561
location: join(2966..3032,3219..3467,4323..4604,4686..4958,5047..5137,5212..5323)
location: region:2966-5323:1
so has part: feature:2966-3032:1:exon
so has part: feature:3219-3467:1:exon
so has part: feature:4323-4604:1:exon
so has part: feature:4686-4958:1:exon
so has part: feature:5047-5137:1:exon
so has part: feature:5212-5323:1:exon

XP_015734068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2966-3032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3219-3467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323-4604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686-4958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5047-5137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5212-5323:1:exon

LOC107321564
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6329..9179
location: region:6329-9179:1
so has part: feature:6329-9179:1:exon
subclass of: SO_0000010

107321564
type: Gene
SIO_000068: ncbigene

position:6329:1
position: 6329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9179:1
position: 9179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6329-9179:1:exon

LOC107321564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321564
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032447983.1
SIO_010081: LOC107321564
subclass of: SO_0000673
so part of: LOC107321564
location: join(6329..6609,6924..7202,7673..7954,8043..8327,8408..8505)
location: region:6329-8505:1
so has part: feature:6329-6609:1:exon
so has part: feature:6924-7202:1:exon
so has part: feature:7673-7954:1:exon
so has part: feature:8043-8327:1:exon
so has part: feature:8408-8505:1:exon

position:8505:1
position: 8505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6329-6609:1:exon

position:6609:1
position: 6609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6924-7202:1:exon

position:6924:1
position: 6924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7202:1
position: 7202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7673-7954:1:exon

position:7673:1
position: 7673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7954:1
position: 7954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8043-8327:1:exon

position:8043:1
position: 8043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8327:1
position: 8327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8408-8505:1:exon

position:8408:1
position: 8408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X2
translation: MLHGDPKGNKFSLVPSYASAALSLDPPRNLTSISPIGGAWPLGPHGSSSSHHPRCAAFAAGTMWPHCLFLFLLFHKTWAEAETSCFPSEETQFFQFFFTMLLDNISSTELTGMATLADLPIIVLDPHTWSLNICWPWVQEVTADSEVKKLLSFSMIVIRNAIRFLHEMVTKAGLDYPLIFQIHAGCKLYANGTRWSFVNAGEGGRDLVTYKINRELWLPQTSTPLAKLISKTLTDNRAVSGLLEDILSSPIPNFILMLHQKGRKDLERQVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGRELPPSPALSTSTVLPNADLTYQLRSTLLVSPQDGHSYACRVQHCSLGDRSLLVPWENPSGSSAVGVTITVLFLIAIIIGGVWWWRRR
SIO_010081: LOC107321564
subclass of: SO_0000673
so part of: LOC107321564
location: join(6363..6609,6924..7202,7673..7954,8043..8327,8408..8505)
location: region:6363-8505:1
so has part: feature:6363-6609:1:exon
so has part: feature:6924-7202:1:exon
so has part: feature:7673-7954:1:exon
so has part: feature:8043-8327:1:exon
so has part: feature:8408-8505:1:exon

XP_032303874.1
type: Protein
SIO_000068: ncbiprotein

position:6363:1
position: 6363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6363-6609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6924-7202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7673-7954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8043-8327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8408-8505:1:exon

LOC107321564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321564
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_015878586.2
SIO_010081: LOC107321564
subclass of: SO_0000673
so part of: LOC107321564
location: join(6471..6609,6924..7202,7673..7954,8043..8327,8408..8501,8574..9179)
location: region:6471-9179:1
so has part: feature:6471-6609:1:exon
so has part: feature:6924-7202:1:exon
so has part: feature:7673-7954:1:exon
so has part: feature:8043-8327:1:exon
so has part: feature:8408-8501:1:exon
so has part: feature:8574-9179:1:exon

position:6471:1
position: 6471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6471-6609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6924-7202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7673-7954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8043-8327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8408-8501:1:exon

position:8501:1
position: 8501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8574-9179:1:exon

position:8574:1
position: 8574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X1
translation: MWPHCLFLFLLFHKTWAEAETSCFPSEETQFFQFFFTMLLDNISSTELTGMATLADLPIIVLDPHTWSLNICWPWVQEVTADSEVKKLLSFSMIVIRNAIRFLHEMVTKAGLDYPLIFQIHAGCKLYANGTRWSFVNAGEGGRDLVTYKINRELWLPQTSTPLAKLISKTLTDNRAVSGLLEDILSSPIPNFILMLHQKGRKDLERQVPPIAVVFARTAGPAQLLLVCRVTSFYPRPITVTWLRDGRELPPSPALSTSTVLPNADLTYQLRSTLLVSPQDGHSYACRVQHCSLGDRSLLVPWENPSGSSAVGVTITVLFLIAIIIGGVWWWRRRKLTGSGRDSRMFLI
SIO_010081: LOC107321564
subclass of: SO_0000673
so part of: LOC107321564
location: join(6549..6609,6924..7202,7673..7954,8043..8327,8408..8501,8574..8619)
location: region:6549-8619:1
so has part: feature:6549-6609:1:exon
so has part: feature:6924-7202:1:exon
so has part: feature:7673-7954:1:exon
so has part: feature:8043-8327:1:exon
so has part: feature:8408-8501:1:exon
so has part: feature:8574-8619:1:exon

XP_015734072.1
type: Protein
SIO_000068: ncbiprotein

position:6549:1
position: 6549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8619:1
position: 8619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6549-6609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6924-7202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7673-7954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8043-8327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8408-8501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8574-8619:1:exon

LOC107321562
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9633..13642)
location: region:9633-13642:-1
so has part: feature:9633-13642:-1:exon
subclass of: SO_0000010

107321562
type: Gene
SIO_000068: ncbigene

position:9633:-1
position: 9633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13642:-1
position: 13642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9633-13642:-1:exon

LOC107321562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321562
product: leukotriene B4 receptor 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015878584.2
SIO_010081: LOC107321562
subclass of: SO_0000673
so part of: LOC107321562
location: complement(join(9633..10880,12683..13642))
location: region:9633-13642:-1
so has part: feature:12683-13642:-1:exon
so has part: feature:9633-10880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12683-13642:-1:exon

position:12683:-1
position: 12683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9633-10880:-1:exon

position:10880:-1
position: 10880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321562
product: leukotriene B4 receptor 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032447984.1
SIO_010081: LOC107321562
subclass of: SO_0000673
so part of: LOC107321562
location: complement(join(9633..10880,11316..12659))
location: region:9633-12659:-1
so has part: feature:11316-12659:-1:exon
so has part: feature:9633-10880:-1:exon

position:12659:-1
position: 12659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11316-12659:-1:exon

position:11316:-1
position: 11316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9633-10880:-1:exon

LOC107321562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like isoform X1
translation: MSPAMPTPPSNATVSAIPNSALGLTLLSLAMVVGLPGNAFVLWSWVVTRRRSIPMLLVAHLALADVATLLTGPVYIRFLSTGRWDLGPAACRGCNYICAAAMYTSIFLIALLGLHRCLVVSRPSTAVLTGDRATHLAHGAAAITWLVALVLATPSIAFRHVENGMCKRNHNSTAWLVTHNLLETGLGWAVPLTAVAVGYGLLLRRLRRTRLARRGRTLRLVAAVVVAFAVTWGPYHVGSLLEVVVELKSCTGTLRKVAKAIRPPATALAFLSSALNPLLYACAGRGLCRTAGAALLPRLLEGSTASSSARRTVTHRARSSRGQQENGGKEVAGEDMGTGDGRTVAEGTVTTDEGTVVESTVMGDSGRA
SIO_010081: LOC107321562
subclass of: SO_0000673
so part of: LOC107321562
location: complement(join(9776..10880,11316..11317))
location: region:9776-11317:-1
so has part: feature:11316-11317:-1:exon
so has part: feature:9776-10880:-1:exon

XP_032303875.1
type: Protein
SIO_000068: ncbiprotein

position:9776:-1
position: 9776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11317:-1
position: 11317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11316-11317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9776-10880:-1:exon

LOC107321562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like isoform X2
translation: MPTPPSNATVSAIPNSALGLTLLSLAMVVGLPGNAFVLWSWVVTRRRSIPMLLVAHLALADVATLLTGPVYIRFLSTGRWDLGPAACRGCNYICAAAMYTSIFLIALLGLHRCLVVSRPSTAVLTGDRATHLAHGAAAITWLVALVLATPSIAFRHVENGMCKRNHNSTAWLVTHNLLETGLGWAVPLTAVAVGYGLLLRRLRRTRLARRGRTLRLVAAVVVAFAVTWGPYHVGSLLEVVVELKSCTGTLRKVAKAIRPPATALAFLSSALNPLLYACAGRGLCRTAGAALLPRLLEGSTASSSARRTVTHRARSSRGQQENGGKEVAGEDMGTGDGRTVAEGTVTTDEGTVVESTVMGDSGRA
SIO_010081: LOC107321562
subclass of: SO_0000673
so part of: LOC107321562
location: complement(9776..10870)
location: region:9776-10870:-1
so has part: feature:9776-10870:-1:exon

XP_015734070.1
type: Protein
SIO_000068: ncbiprotein

position:10870:-1
position: 10870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9776-10870:-1:exon

LOC116654150
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15264..23296
location: region:15264-23296:1
so has part: feature:15264-23296:1:exon
subclass of: SO_0000010

116654150
type: Gene
SIO_000068: ncbigene

position:15264:1
position: 15264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23296:1
position: 23296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15264-23296:1:exon

LOC116654150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654150
product: tenascin-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448005.1
SIO_010081: LOC116654150
subclass of: SO_0000673
so part of: LOC116654150
location: join(15264..15607,16503..16723,17221..17454,17924..18036,18307..18460,19380..20216,20294..20383,20584..20874,21415..21708,22536..22832,23271..23296)
location: region:15264-23296:1
so has part: feature:15264-15607:1:exon
so has part: feature:16503-16723:1:exon
so has part: feature:17221-17454:1:exon
so has part: feature:17924-18036:1:exon
so has part: feature:18307-18460:1:exon
so has part: feature:19380-20216:1:exon
so has part: feature:20294-20383:1:exon
so has part: feature:20584-20874:1:exon
so has part: feature:21415-21708:1:exon
so has part: feature:22536-22832:1:exon
so has part: feature:23271-23296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15264-15607:1:exon

position:15607:1
position: 15607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16503-16723:1:exon

position:16503:1
position: 16503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16723:1
position: 16723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17221-17454:1:exon

position:17221:1
position: 17221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17454:1
position: 17454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17924-18036:1:exon

position:17924:1
position: 17924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18036:1
position: 18036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18307-18460:1:exon

position:18307:1
position: 18307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18460:1
position: 18460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19380-20216:1:exon

position:19380:1
position: 19380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20216:1
position: 20216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20294-20383:1:exon

position:20294:1
position: 20294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20383:1
position: 20383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:20584-20874:1:exon

position:20584:1
position: 20584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20874:1
position: 20874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21415-21708:1:exon

position:21415:1
position: 21415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21708:1
position: 21708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22536-22832:1:exon

position:22536:1
position: 22536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22832:1
position: 22832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:23271-23296:1:exon

position:23271:1
position: 23271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like
translation: MTPGLPLLLLALALRRAQGNPGASPGPPPASPELSCGAEVLEAVLGRLRALEGEVRALQGQCGDSLGPQAGTGSTAAWKLCDTPGAGGCCGCRPGEAGNGLPCPAPRCPLDCSDQGRCRAGRCHCFEGFTGPFCATPVCPPGRGGPHCTLEIPSVTLRLAARNQTSFRVTWPRPAKPVDGYEVAVIPMDEPTALTTHELPGSAVTFEVTGLTPGQAFEIFIQAQRDQHLGAPGTLRVRTLLAPSQPTHGGSRKTPTFLAPPVAPASPSARGSPASPRSPMSPASPGSPGSLGSPASSTSPKSPASLRSPVSPESSAAPTSLESPWSPESPVSPRSPTSPWPPASPQSPLSPASPVSPVLPNVPSLHELGVKLSSYNGSLLQRLESHLRATNYPLRGNQTVPAVARAILSYLLRRSPASLRYQFLRHLQQSPHPKPQVLPGAAGEALVDLDGLRGHAETVVIRYRLLEEPEGEEGEMRVPGDTTVARVPGLVPGATYRVEVHGVVRGRVSKSYTSVVTAGLGDTSEPPPEWKNLYEVEVTEPQGAMAKAAPSEEEPPQRPRLGTLTVSHVTPSSIQLEWSVLEGTFDSFTVQYRDAQGQPQALAVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRIGLISTDAVTTASAKPNEEPPSPPRLGELTTSHVSPDSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVQGLAPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEIGEEEPPSQPHLGELTASHVSPDSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRLGPISTDAVTEKWLDISS
SIO_010081: LOC116654150
subclass of: SO_0000673
so part of: LOC116654150
location: join(16507..16723,17221..17454,17924..18036,18307..18460,19380..20216,20294..20383,20584..20874,21415..21708,22536..22832,23271..23296)
location: region:16507-23296:1
so has part: feature:16507-16723:1:exon
so has part: feature:17221-17454:1:exon
so has part: feature:17924-18036:1:exon
so has part: feature:18307-18460:1:exon
so has part: feature:19380-20216:1:exon
so has part: feature:20294-20383:1:exon
so has part: feature:20584-20874:1:exon
so has part: feature:21415-21708:1:exon
so has part: feature:22536-22832:1:exon
so has part: feature:23271-23296:1:exon

XP_032303896.1
type: Protein
SIO_000068: ncbiprotein

position:16507:1
position: 16507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16507-16723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17221-17454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17924-18036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18307-18460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19380-20216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20294-20383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20584-20874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21415-21708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22536-22832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23271-23296:1:exon

LOC107321567
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22726..47061
location: region:22726-47061:1
so has part: feature:22726-47061:1:exon
subclass of: SO_0000010

107321567
type: Gene
SIO_000068: ncbigene

position:22726:1
position: 22726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47061:1
position: 47061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22726-47061:1:exon

LOC107321567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321567
product: tenascin-X
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448003.1
SIO_010081: LOC107321567
subclass of: SO_0000673
so part of: LOC107321567
location: join(22726..22832,23491..23787,24143..24436,25062..25358,25688..25981,26348..26641,27248..27544,28203..28499,29140..29436,29703..29996,31433..31729,32106..32399,33060..33356,33684..33977,35383..35679,36309..36605,37268..37559,37891..38188,39379..39666,40307..40608,40945..41238,41875..42171,42509..42802,43812..43936,44471..44591,44929..45080,45634..45730,45969..46130,46487..46650,46915..47061)
location: region:22726-47061:1
so has part: feature:22726-22832:1:exon
so has part: feature:23491-23787:1:exon
so has part: feature:24143-24436:1:exon
so has part: feature:25062-25358:1:exon
so has part: feature:25688-25981:1:exon
so has part: feature:26348-26641:1:exon
so has part: feature:27248-27544:1:exon
so has part: feature:28203-28499:1:exon
so has part: feature:29140-29436:1:exon
so has part: feature:29703-29996:1:exon
so has part: feature:31433-31729:1:exon
so has part: feature:32106-32399:1:exon
so has part: feature:33060-33356:1:exon
so has part: feature:33684-33977:1:exon
so has part: feature:35383-35679:1:exon
so has part: feature:36309-36605:1:exon
so has part: feature:37268-37559:1:exon
so has part: feature:37891-38188:1:exon
so has part: feature:39379-39666:1:exon
so has part: feature:40307-40608:1:exon
so has part: feature:40945-41238:1:exon
so has part: feature:41875-42171:1:exon
so has part: feature:42509-42802:1:exon
so has part: feature:43812-43936:1:exon
so has part: feature:44471-44591:1:exon
so has part: feature:44929-45080:1:exon
so has part: feature:45634-45730:1:exon
so has part: feature:45969-46130:1:exon
so has part: feature:46487-46650:1:exon
so has part: feature:46915-47061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22726-22832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23491-23787:1:exon

position:23491:1
position: 23491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23787:1
position: 23787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24143-24436:1:exon

position:24143:1
position: 24143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24436:1
position: 24436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25062-25358:1:exon

position:25062:1
position: 25062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25358:1
position: 25358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25688-25981:1:exon

position:25688:1
position: 25688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25981:1
position: 25981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26348-26641:1:exon

position:26348:1
position: 26348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26641:1
position: 26641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27248-27544:1:exon

position:27248:1
position: 27248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27544:1
position: 27544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:28203-28499:1:exon

position:28203:1
position: 28203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28499:1
position: 28499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:29140-29436:1:exon

position:29140:1
position: 29140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29436:1
position: 29436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:29703-29996:1:exon

position:29703:1
position: 29703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29996:1
position: 29996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31433-31729:1:exon

position:31433:1
position: 31433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31729:1
position: 31729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:32106-32399:1:exon

position:32106:1
position: 32106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32399:1
position: 32399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:33060-33356:1:exon

position:33060:1
position: 33060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33356:1
position: 33356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:33684-33977:1:exon

position:33684:1
position: 33684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33977:1
position: 33977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:35383-35679:1:exon

position:35383:1
position: 35383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35679:1
position: 35679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:36309-36605:1:exon

position:36309:1
position: 36309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36605:1
position: 36605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:37268-37559:1:exon

position:37268:1
position: 37268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37559:1
position: 37559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:37891-38188:1:exon

position:37891:1
position: 37891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38188:1
position: 38188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:39379-39666:1:exon

position:39379:1
position: 39379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39666:1
position: 39666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:40307-40608:1:exon

position:40307:1
position: 40307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40608:1
position: 40608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:40945-41238:1:exon

position:40945:1
position: 40945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41238:1
position: 41238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:41875-42171:1:exon

position:41875:1
position: 41875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42171:1
position: 42171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:42509-42802:1:exon

position:42509:1
position: 42509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42802:1
position: 42802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:43812-43936:1:exon

position:43812:1
position: 43812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43936:1
position: 43936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:44471-44591:1:exon

position:44471:1
position: 44471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44591:1
position: 44591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:44929-45080:1:exon

position:44929:1
position: 44929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45080:1
position: 45080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:45634-45730:1:exon

position:45634:1
position: 45634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45730:1
position: 45730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:45969-46130:1:exon

position:45969:1
position: 45969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46130:1
position: 46130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:46487-46650:1:exon

position:46487:1
position: 46487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46650:1
position: 46650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:46915-47061:1:exon

position:46915:1
position: 46915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321567
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tenascin-X
translation: MEEEEPPSQPSLGELTAFHVSPDSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGVWGRKRLGPISTDAVTAVSPAKDVQPTQPRLGELTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEMEEEEPPSQPRLGELTASHVSPNSVQLEWSIPEGSFDSFTVQYEDAQGQTQELHLDSGSRTATVSGLLPSHPYQFNLYGMWGQTRLGPISTDTITAAAPAQEEPPSPPRLGELTASHVSPKSVQLEWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLSPSRRYKFNLYGVWGRKRLGPISTDAVTAAAPAQEEPPSQPRLGELTASHVSHNSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEIGEEEPPSQPHLGELTASHVSPDSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEMEEEEPPSQPSLGELTASHVSPNSIQLQWSVPEGSFDSFTVQYKDAQGQPQMLPVDGGSRTVTVPGLAPSRHYKFNLYGVWGRKRLGPISTDAVTAAEETEEEEPPSQPRLGELTASHVSPNSVQLEWSVPEGSFDSFTMQYMDEHGQPQELHLDSGSRTATVSGLLPSHPYKFNLYGVWGQTRLGPISTDTITAAAPAQEEPPSPPRLGELTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRLGPISTDAVTATEEMEEEESPSQPRLGELTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGVWGRKRLGPISTDAVTAASPAKDVQPPQPHLGELTASHVSPDSIQLEWSVPKGSFDSFTVQYKDAQGQPQMLPVDGGSRTVTVPGLAPSRRYKFNLYGVWGRKRLGPISTDAITAAEEVEEEEPPSQPRLGELTASHVSPNSVQLQWSIPEGSFDSFTVQYMDEHGQPQELHLDSGARTATVSGLLPSHPYQFNLYGVWGQTRLGPISTDTITAAAPAKEEPPSPPRLGELTASHVSPDSIQLEWSIPEGSFNSFTVQYKDAQGQPQVLPVDGGSRTVTVPWLAPSRRYKFNLYGLWGRKRLGPISTDAVTAAEEMEEEEPPSQPSLGELTAFHVSPDSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEMEEEEPPSQPHLGELTASNVSPNSVQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLSPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEMEEEEPPSQPHLGELTASHVSPNSVQLDWSVPEGSFDSFTVQYMDAQGQTQELHLDSGSRTATVSGLLPSHPYQFNLYGVWGQTRLGPISTDTIAAAAPAQEEPPSPPRLGELTASHVXPDTVQLQWSXPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGLWGRKRLGPISTDAITARKDEDSPSKPRLGELTASHISPNSIQLQWSVPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLAPSRRYKFNLYGMWGRKRLGPISTDAITAATEEMEEEEPPSQPRLGELTASHVSPNSVQLEWSIPEGSFDSFTLQYMDEHGQPQKLHFDSGSRTATVSGLLPSHPYQFNLYGGVGRDTSGPHSTDTITAAAPAKEEPPSPPRLGELTASHVSPDTVQXEWSRPEGSFDSFTVQYKDAQGQPQVLPVDGGSRTVTVPGLVPSRRYKFNLYGVSGRKRLGPISTDAITAAEETEEEEPPSQPRLGELTASHVSPNSVQLEWS…
SIO_010081: LOC107321567
subclass of: SO_0000673
so part of: LOC107321567
location: join(23502..23787,24143..24436,25062..25358,25688..25981,26348..26641,27248..27544,28203..28499,29140..29436,29703..29996,31433..31729,32106..32399,33060..33356,33684..33977,35383..35679,36309..36605,37268..37559,37891..38188,39379..39666,40307..40608,40945..41238,41875..42171,42509..42802,43812..43936,44471..44591,44929..45080,45634..45730,45969..46130,46487..46650,46915..46995)
location: region:23502-46995:1
so has part: feature:23502-23787:1:exon
so has part: feature:24143-24436:1:exon
so has part: feature:25062-25358:1:exon
so has part: feature:25688-25981:1:exon
so has part: feature:26348-26641:1:exon
so has part: feature:27248-27544:1:exon
so has part: feature:28203-28499:1:exon
so has part: feature:29140-29436:1:exon
so has part: feature:29703-29996:1:exon
so has part: feature:31433-31729:1:exon
so has part: feature:32106-32399:1:exon
so has part: feature:33060-33356:1:exon
so has part: feature:33684-33977:1:exon
so has part: feature:35383-35679:1:exon
so has part: feature:36309-36605:1:exon
so has part: feature:37268-37559:1:exon
so has part: feature:37891-38188:1:exon
so has part: feature:39379-39666:1:exon
so has part: feature:40307-40608:1:exon
so has part: feature:40945-41238:1:exon
so has part: feature:41875-42171:1:exon
so has part: feature:42509-42802:1:exon
so has part: feature:43812-43936:1:exon
so has part: feature:44471-44591:1:exon
so has part: feature:44929-45080:1:exon
so has part: feature:45634-45730:1:exon
so has part: feature:45969-46130:1:exon
so has part: feature:46487-46650:1:exon
so has part: feature:46915-46995:1:exon

XP_032303894.1
type: Protein
SIO_000068: ncbiprotein

position:23502:1
position: 23502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46995:1
position: 46995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23502-23787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24143-24436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25062-25358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25688-25981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26348-26641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27248-27544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28203-28499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29140-29436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29703-29996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31433-31729:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:32106-32399:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:33060-33356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:33684-33977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35383-35679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:36309-36605:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:37268-37559:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:37891-38188:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:39379-39666:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40307-40608:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40945-41238:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:41875-42171:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:42509-42802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:43812-43936:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:44471-44591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:44929-45080:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:45634-45730:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:45969-46130:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:46487-46650:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:46915-46995:1:exon

LOC107321560
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47013..51146)
location: region:47013-51146:-1
so has part: feature:47013-51146:-1:exon
subclass of: SO_0000010

107321560
type: Gene
SIO_000068: ncbigene

position:47013:-1
position: 47013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51146:-1
position: 51146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47013-51146:-1:exon

LOC107321560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321560
product: steroid 21-hydroxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_015878579.2
SIO_010081: LOC107321560
subclass of: SO_0000673
so part of: LOC107321560
location: complement(join(47013..47339,47434..47537,47844..48013,48302..48487,48559..48645,49006..49113,49459..49554,49697..49848,50324..50413,50742..51142))
location: region:47013-51142:-1
so has part: feature:50742-51142:-1:exon
so has part: feature:50324-50413:-1:exon
so has part: feature:49697-49848:-1:exon
so has part: feature:49459-49554:-1:exon
so has part: feature:49006-49113:-1:exon
so has part: feature:48559-48645:-1:exon
so has part: feature:48302-48487:-1:exon
so has part: feature:47844-48013:-1:exon
so has part: feature:47434-47537:-1:exon
so has part: feature:47013-47339:-1:exon

position:51142:-1
position: 51142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50742-51142:-1:exon

position:50742:-1
position: 50742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50324-50413:-1:exon

position:50324:-1
position: 50324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50413:-1
position: 50413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49697-49848:-1:exon

position:49697:-1
position: 49697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49848:-1
position: 49848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49459-49554:-1:exon

position:49459:-1
position: 49459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49554:-1
position: 49554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:49006-49113:-1:exon

position:49006:-1
position: 49006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49113:-1
position: 49113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48559-48645:-1:exon

position:48559:-1
position: 48559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48645:-1
position: 48645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:48302-48487:-1:exon

position:48302:-1
position: 48302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48487:-1
position: 48487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47844-48013:-1:exon

position:47844:-1
position: 47844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48013:-1
position: 48013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:47434-47537:-1:exon

position:47434:-1
position: 47434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47537:-1
position: 47537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:47013-47339:-1:exon

position:47339:-1
position: 47339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid 21-hydroxylase isoform X1
translation: MNFGGGRGVATRCPCSGRRVLGVGGVELLGSLPFIRCYRGRAGPPPHTPHRAMVAVMLLLLLLLALIWGGSARRGGAPWWGVFHLLHPEGPQHLHILTRTYGDPLCLRLGGREVVVLSSAAAIREALARRWGDFVGRPHSYLASLVSRGGQDLALGDASPEWRRQRGATRGALARAVRHLEPILELQGWALCRELSSYGAAPVDLFEAFAFHTCSTICRLAFGDLMPPEAEVRSFTRCVVELLEVWGRASVRALDVLPPLRVLPNPGLRELLRLVKSRDAFVETQIRWHQGCASPPADTVLGALLGGDPTVPMGPLGGDRLHMALVDLFIGGTETTAAALLWAVAFLLHHPQVQDRVRAELRQVLGPTGTPKPGDMGRLPLLRATITETLRLRPTAPLALPHCARRHSSIAGMLVPAGSIIIPNLFAAHHDPKVWDRPDEFLPERFLQPGAPWRALLPFGCGARSCVGEALARAELFVFLGHILQRFRLEPPSDGALPHLGVTAGTVLRCAPFRVRLVPCPPHSS
SIO_010081: LOC107321560
subclass of: SO_0000673
so part of: LOC107321560
location: complement(join(47092..47339,47434..47537,47844..48013,48302..48487,48559..48645,49006..49113,49459..49554,49697..49848,50324..50413,50742..51078))
location: region:47092-51078:-1
so has part: feature:50742-51078:-1:exon
so has part: feature:50324-50413:-1:exon
so has part: feature:49697-49848:-1:exon
so has part: feature:49459-49554:-1:exon
so has part: feature:49006-49113:-1:exon
so has part: feature:48559-48645:-1:exon
so has part: feature:48302-48487:-1:exon
so has part: feature:47844-48013:-1:exon
so has part: feature:47434-47537:-1:exon
so has part: feature:47092-47339:-1:exon

XP_015734065.1
type: Protein
SIO_000068: ncbiprotein

position:47092:-1
position: 47092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51078:-1
position: 51078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50742-51078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50324-50413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49697-49848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49459-49554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49006-49113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48559-48645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48302-48487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47844-48013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47434-47537:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47092-47339:-1:exon

LOC107321560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321560
product: steroid 21-hydroxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_015878580.2
SIO_010081: LOC107321560
subclass of: SO_0000673
so part of: LOC107321560
location: complement(join(47434..47537,47640..47716,47844..48013,48302..48487,48559..48645,49006..49113,49459..49554,49697..49848,50324..50413,50742..51146))
location: region:47434-51146:-1
so has part: feature:50742-51146:-1:exon
so has part: feature:50324-50413:-1:exon
so has part: feature:49697-49848:-1:exon
so has part: feature:49459-49554:-1:exon
so has part: feature:49006-49113:-1:exon
so has part: feature:48559-48645:-1:exon
so has part: feature:48302-48487:-1:exon
so has part: feature:47844-48013:-1:exon
so has part: feature:47640-47716:-1:exon
so has part: feature:47434-47537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50742-51146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50324-50413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49697-49848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49459-49554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49006-49113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48559-48645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48302-48487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47844-48013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47640-47716:-1:exon

position:47640:-1
position: 47640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47716:-1
position: 47716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:47434-47537:-1:exon

LOC107321560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid 21-hydroxylase isoform X2
translation: MNFGGGRGVATRCPCSGRRVLGVGGVELLGSLPFIRCYRGRAGPPPHTPHRAMVAVMLLLLLLLALIWGGSARRGGAPWWGVFHLLHPEGPQHLHILTRTYGDPLCLRLGGREVVVLSSAAAIREALARRWGDFVGRPHSYLASLVSRGGQDLALGDASPEWRRQRGATRGALARAVRHLEPILELQGWALCRELSSYGAAPVDLFEAFAFHTCSTICRLAFGDLMPPEAEVRSFTRCVVELLEVWGRASVRALDVLPPLRVLPNPGLRELLRLVKSRDAFVETQIRWHQGCASPPADTVLGALLGGDPTVPMGPLGGDRLHMALVDLFIGGTETTAAALLWAVAFLLHHPQVQDRVRAELRQVLGPTGTPKPGDMGRLPLLRATITETLRLRPTAPLALPHCARRHSRMNHCTPLQTSMDLPVGWPQ
SIO_010081: LOC107321560
subclass of: SO_0000673
so part of: LOC107321560
location: complement(join(47656..47716,47844..48013,48302..48487,48559..48645,49006..49113,49459..49554,49697..49848,50324..50413,50742..51078))
location: region:47656-51078:-1
so has part: feature:50742-51078:-1:exon
so has part: feature:50324-50413:-1:exon
so has part: feature:49697-49848:-1:exon
so has part: feature:49459-49554:-1:exon
so has part: feature:49006-49113:-1:exon
so has part: feature:48559-48645:-1:exon
so has part: feature:48302-48487:-1:exon
so has part: feature:47844-48013:-1:exon
so has part: feature:47656-47716:-1:exon

XP_015734066.1
type: Protein
SIO_000068: ncbiprotein

position:47656:-1
position: 47656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50742-51078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50324-50413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49697-49848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49459-49554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49006-49113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48559-48645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48302-48487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47844-48013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47656-47716:-1:exon

CENPA
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CENPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51219..55865)
location: region:51219-55865:-1
so has part: feature:51219-55865:-1:exon
subclass of: SO_0000010

107321566
type: Gene
SIO_000068: ncbigene

position:51219:-1
position: 51219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55865:-1
position: 55865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51219-55865:-1:exon

CENPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CENPA
product: centromere protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_015878589.2
SIO_010081: CENPA
subclass of: SO_0000673
so part of: CENPA
location: complement(join(51219..51391,51809..51886,55554..55651,55736..55865))
location: region:51219-55865:-1
so has part: feature:55736-55865:-1:exon
so has part: feature:55554-55651:-1:exon
so has part: feature:51809-51886:-1:exon
so has part: feature:51219-51391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55736-55865:-1:exon

position:55736:-1
position: 55736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55554-55651:-1:exon

position:55554:-1
position: 55554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55651:-1
position: 55651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51809-51886:-1:exon

position:51809:-1
position: 51809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51886:-1
position: 51886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51219-51391:-1:exon

position:51391:-1
position: 51391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CENPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A
translation: MPRPKPHSPRRRSRPPTAPPPTPRRPRVRRYRPGQRALKEIRRYQSSTALLLRRRPFARVVREICLLFTRGVDYKWQAMALLALQEAAEAFLVHLLEDAYLCSLHARRVTLFPKDLQLARRLRGLQGEGF
SIO_010081: CENPA
subclass of: SO_0000673
so part of: CENPA
location: complement(join(51257..51391,51809..51886,55554..55651,55736..55817))
location: region:51257-55817:-1
so has part: feature:55736-55817:-1:exon
so has part: feature:55554-55651:-1:exon
so has part: feature:51809-51886:-1:exon
so has part: feature:51257-51391:-1:exon

XP_015734075.1
type: Protein
SIO_000068: ncbiprotein

position:51257:-1
position: 51257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55817:-1
position: 55817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55736-55817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55554-55651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51809-51886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51257-51391:-1:exon

LOC107321557
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(58348..76146)
location: region:58348-76146:-1
so has part: feature:58348-76146:-1:exon
subclass of: SO_0000010

107321557
type: Gene
SIO_000068: ncbigene

position:58348:-1
position: 58348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76146:-1
position: 76146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58348-76146:-1:exon

LOC107321557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321557
product: complement C4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015878576.1
SIO_010081: LOC107321557
subclass of: SO_0000673
so part of: LOC107321557
location: complement(join(58348..58777,58908..59040,59340..59423,59729..59818,60037..60126,60231..60333,60477..60551,60946..61036,61121..61325,61418..61511,62341..62400,62599..62769,62882..63048,63329..63494,63853..63969,64073..64229,64364..64439,64678..64875,65497..65586,65662..65713,65997..66197,66640..66779,66941..67011,67115..67229,67462..67656,67949..68020,68184..68310,68560..68715,69971..70156,70653..70838,70926..71096,71659..71771,72925..73048,73144..73252,73879..73975,74045..74127,74643..74731,74829..74899,75186..75363,75522..75711,76017..76146))
location: region:58348-76146:-1
so has part: feature:76017-76146:-1:exon
so has part: feature:75522-75711:-1:exon
so has part: feature:75186-75363:-1:exon
so has part: feature:74829-74899:-1:exon
so has part: feature:74643-74731:-1:exon
so has part: feature:74045-74127:-1:exon
so has part: feature:73879-73975:-1:exon
so has part: feature:73144-73252:-1:exon
so has part: feature:72925-73048:-1:exon
so has part: feature:71659-71771:-1:exon
so has part: feature:70926-71096:-1:exon
so has part: feature:70653-70838:-1:exon
so has part: feature:69971-70156:-1:exon
so has part: feature:68560-68715:-1:exon
so has part: feature:68184-68310:-1:exon
so has part: feature:67949-68020:-1:exon
so has part: feature:67462-67656:-1:exon
so has part: feature:67115-67229:-1:exon
so has part: feature:66941-67011:-1:exon
so has part: feature:66640-66779:-1:exon
so has part: feature:65997-66197:-1:exon
so has part: feature:65662-65713:-1:exon
so has part: feature:65497-65586:-1:exon
so has part: feature:64678-64875:-1:exon
so has part: feature:64364-64439:-1:exon
so has part: feature:64073-64229:-1:exon
so has part: feature:63853-63969:-1:exon
so has part: feature:63329-63494:-1:exon
so has part: feature:62882-63048:-1:exon
so has part: feature:62599-62769:-1:exon
so has part: feature:62341-62400:-1:exon
so has part: feature:61418-61511:-1:exon
so has part: feature:61121-61325:-1:exon
so has part: feature:60946-61036:-1:exon
so has part: feature:60477-60551:-1:exon
so has part: feature:60231-60333:-1:exon
so has part: feature:60037-60126:-1:exon
so has part: feature:59729-59818:-1:exon
so has part: feature:59340-59423:-1:exon
so has part: feature:58908-59040:-1:exon
so has part: feature:58348-58777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76017-76146:-1:exon

position:76017:-1
position: 76017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75522-75711:-1:exon

position:75522:-1
position: 75522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75711:-1
position: 75711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75186-75363:-1:exon

position:75186:-1
position: 75186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75363:-1
position: 75363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74829-74899:-1:exon

position:74829:-1
position: 74829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74899:-1
position: 74899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74643-74731:-1:exon

position:74643:-1
position: 74643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74731:-1
position: 74731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74045-74127:-1:exon

position:74045:-1
position: 74045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74127:-1
position: 74127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:73879-73975:-1:exon

position:73879:-1
position: 73879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73975:-1
position: 73975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73144-73252:-1:exon

position:73144:-1
position: 73144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73252:-1
position: 73252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:72925-73048:-1:exon

position:72925:-1
position: 72925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73048:-1
position: 73048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:71659-71771:-1:exon

position:71659:-1
position: 71659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71771:-1
position: 71771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:70926-71096:-1:exon

position:70926:-1
position: 70926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71096:-1
position: 71096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70653-70838:-1:exon

position:70653:-1
position: 70653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70838:-1
position: 70838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69971-70156:-1:exon

position:69971:-1
position: 69971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70156:-1
position: 70156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:68560-68715:-1:exon

position:68560:-1
position: 68560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68715:-1
position: 68715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:68184-68310:-1:exon

position:68184:-1
position: 68184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68310:-1
position: 68310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:67949-68020:-1:exon

position:67949:-1
position: 67949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68020:-1
position: 68020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:67462-67656:-1:exon

position:67462:-1
position: 67462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67656:-1
position: 67656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:67115-67229:-1:exon

position:67115:-1
position: 67115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67229:-1
position: 67229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:66941-67011:-1:exon

position:66941:-1
position: 66941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67011:-1
position: 67011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:66640-66779:-1:exon

position:66640:-1
position: 66640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66779:-1
position: 66779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:65997-66197:-1:exon

position:65997:-1
position: 65997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66197:-1
position: 66197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:65662-65713:-1:exon

position:65662:-1
position: 65662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65713:-1
position: 65713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:65497-65586:-1:exon

position:65497:-1
position: 65497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65586:-1
position: 65586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:64678-64875:-1:exon

position:64678:-1
position: 64678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64875:-1
position: 64875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:64364-64439:-1:exon

position:64364:-1
position: 64364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64439:-1
position: 64439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:64073-64229:-1:exon

position:64073:-1
position: 64073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64229:-1
position: 64229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:63853-63969:-1:exon

position:63853:-1
position: 63853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63969:-1
position: 63969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:63329-63494:-1:exon

position:63329:-1
position: 63329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63494:-1
position: 63494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:62882-63048:-1:exon

position:62882:-1
position: 62882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63048:-1
position: 63048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:62599-62769:-1:exon

position:62599:-1
position: 62599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62769:-1
position: 62769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:62341-62400:-1:exon

position:62341:-1
position: 62341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62400:-1
position: 62400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:61418-61511:-1:exon

position:61418:-1
position: 61418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61511:-1
position: 61511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:61121-61325:-1:exon

position:61121:-1
position: 61121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61325:-1
position: 61325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:60946-61036:-1:exon

position:60946:-1
position: 60946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61036:-1
position: 61036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:60477-60551:-1:exon

position:60477:-1
position: 60477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60551:-1
position: 60551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:60231-60333:-1:exon

position:60231:-1
position: 60231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60333:-1
position: 60333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:60037-60126:-1:exon

position:60037:-1
position: 60037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60126:-1
position: 60126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:59729-59818:-1:exon

position:59729:-1
position: 59729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59818:-1
position: 59818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:59340-59423:-1:exon

position:59340:-1
position: 59340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59423:-1
position: 59423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:58908-59040:-1:exon

position:58908:-1
position: 58908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59040:-1
position: 59040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:58348-58777:-1:exon

position:58777:-1
position: 58777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321557
product: complement C4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015878575.1
SIO_010081: LOC107321557
subclass of: SO_0000673
so part of: LOC107321557
location: complement(join(58348..58777,58908..59040,59340..59423,59729..59818,60037..60126,60231..60333,60477..60551,60946..61036,61121..61328,61418..61511,62341..62400,62599..62769,62882..63048,63329..63494,63853..63969,64073..64229,64364..64439,64678..64875,65497..65586,65662..65713,65997..66197,66640..66779,66941..67011,67115..67229,67462..67656,67949..68020,68184..68310,68560..68715,69971..70156,70653..70838,70926..71096,71659..71771,72925..73048,73144..73252,73879..73975,74045..74127,74643..74731,74829..74899,75186..75363,75522..75711,76017..76146))
location: region:58348-76146:-1
so has part: feature:76017-76146:-1:exon
so has part: feature:75522-75711:-1:exon
so has part: feature:75186-75363:-1:exon
so has part: feature:74829-74899:-1:exon
so has part: feature:74643-74731:-1:exon
so has part: feature:74045-74127:-1:exon
so has part: feature:73879-73975:-1:exon
so has part: feature:73144-73252:-1:exon
so has part: feature:72925-73048:-1:exon
so has part: feature:71659-71771:-1:exon
so has part: feature:70926-71096:-1:exon
so has part: feature:70653-70838:-1:exon
so has part: feature:69971-70156:-1:exon
so has part: feature:68560-68715:-1:exon
so has part: feature:68184-68310:-1:exon
so has part: feature:67949-68020:-1:exon
so has part: feature:67462-67656:-1:exon
so has part: feature:67115-67229:-1:exon
so has part: feature:66941-67011:-1:exon
so has part: feature:66640-66779:-1:exon
so has part: feature:65997-66197:-1:exon
so has part: feature:65662-65713:-1:exon
so has part: feature:65497-65586:-1:exon
so has part: feature:64678-64875:-1:exon
so has part: feature:64364-64439:-1:exon
so has part: feature:64073-64229:-1:exon
so has part: feature:63853-63969:-1:exon
so has part: feature:63329-63494:-1:exon
so has part: feature:62882-63048:-1:exon
so has part: feature:62599-62769:-1:exon
so has part: feature:62341-62400:-1:exon
so has part: feature:61418-61511:-1:exon
so has part: feature:61121-61328:-1:exon
so has part: feature:60946-61036:-1:exon
so has part: feature:60477-60551:-1:exon
so has part: feature:60231-60333:-1:exon
so has part: feature:60037-60126:-1:exon
so has part: feature:59729-59818:-1:exon
so has part: feature:59340-59423:-1:exon
so has part: feature:58908-59040:-1:exon
so has part: feature:58348-58777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76017-76146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75522-75711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75186-75363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74829-74899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74643-74731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74045-74127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73879-73975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73144-73252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72925-73048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71659-71771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70926-71096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70653-70838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69971-70156:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68560-68715:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68184-68310:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67949-68020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67462-67656:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67115-67229:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:66941-67011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:66640-66779:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:65997-66197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65662-65713:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65497-65586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64678-64875:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64364-64439:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:64073-64229:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:63853-63969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:63329-63494:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:62882-63048:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:62599-62769:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:62341-62400:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:61418-61511:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:61121-61328:-1:exon

position:61328:-1
position: 61328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:60946-61036:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:60477-60551:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:60231-60333:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:60037-60126:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:59729-59818:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:59340-59423:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:58908-59040:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:58348-58777:-1:exon

LOC107321557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C4-like isoform X2
translation: MGPPWAFSLFLLLFLTKLMEGSSQDPELVLVAPRRVALGTPMGLLVASVGPVTGTVTAWAEGDRGAGPCALPVPFALTAHNNFNQLLQIEVTPVQAERCGALWGRGLLLEAHSPRLPPPGTQSLRVALGGPRGHLIVQTDKPLYAPRQTVRFRVFSMDPNLQPNPEPVLVTITNPLGARVREVQRVPLDTVLSDQLVLPDIALPGTWHIRAQLAASPNTNSSTAFEVRKYVLPGFEVSIRPERGFIVLSDPEPAPLRVHLHVQFPDGAPVWGRAQLRVGLRDAGGQGGRFLRGLEQQCQVTEGHASMEVSPVGVAKAAGVALTDLQGALLRLTVGVVESAGGELVERELLVPLVLSQWMLQLQKSARFFVPGAPYTLLGRVLQAGGVTAPGVPVKVTVGVTGAPSPPLIELRADNSGDIIVPINVPKGANRMELSVEAGQPGATPARAQLMVTPMTAVSGQFLVLGGPRGSVRPGEELRLQLHHMGPPPTPKRFHLLAMARGRVVAAHTVASQVTLTEVALPVTADMAPYLHVVAFFLSGGNVVAAAWGGAVQGGCDEQVQVKVPPRGTTLRPQDPMMVTVTTGTPVTVAIGAIDTTVLNLEPRHRLNAAKVEAVLGSSDLGCSHRGGPDAVGVFGAAGLVLGWRGGSPTAQVAPHCPLAPTRQRRSLELLKLLEEKAGPWRNNTVMWRCCRDGATVLPIRATCQQRGQRVTKVGGCQDAFLQCCEVAQNLRRKGQSRGLGRVLEAQLAEQLLDDDEDVPTRSFFPESWLWRRIRVTGTKRLSVLLPDSITTWEIQAVAIVPGHGLCVAEPQRVTVTQDVRVALRLPPSIRPREQLQLQPLIHSRLPRSINVTVSLSAVEGVCAALEGVPQMLELPPGRAVAAPLTLVALHPGDIPITITARGPWGLGDRITRVLHVEPEGELHLEESTYVLDTDDKRSRSLKLPGDVPAEIVPDGDFSMSIRVSGRVPGWALQGALGVGDTLLRSPRGCGEQSLMSMAPTAAALRFLDESEGWGQLPPGHRQRGLRTLQQGFERVQSFRKSDGSYGAWLHRDSSTWLTALVLRVLALSRTYLPVAASGPAESLRWVLEQQRPDGAFLEHRAVIHREMQGGVADPGPEATVSLTAFVVVALHGARALLPQDSPELPLLDKSLSRASTFLRGRVEQLGTYGTAITSYALTLVDTTPPGPHPAVERLRGMARSAHGGRATFWPSGGPAATVEATGYALLALLQSRNIAGAGRAARWLRQQSNYGGGFHSTQDTVVALEALAQMWLHWGRGSSSEMNLGLSWPGSARGKAGGTRVTLKPGLEPLEQELQVPLGSPVTVQVEGHGEGTLTVLRQFRLLSPPNATCQALHLEVAITGPILYHDEDYEGYDYEEAEPKEGEEPMEGAGPIEGEGAADDPTPFSPISSWDARKRHRRSTQSSAHEVAFLVCFWRSPEVVLTGMVVVEISLLSGFSPHRTDLDKLRDVVDHWISHYELDGNQLVLYLDEVPSERQCLSFGATQDVAVGHMQPAMAAIYDYYEPGQRCTIFYNAPQRSSTIATLCSPKICECAQGGCPHAQRKTQDVTADDRHDFACYSPRVDYALVVRVLSQSEIGAFVAFETEIKEVLFGGQDTTAAPGERRRLLVRKSCPLRLQPHNIYLVMGGSGGTRDPEGRPQFLLGPNSWVEEVPSPGHCRATRLRGHCTQLQEFITRLSQLGCQL
SIO_010081: LOC107321557
subclass of: SO_0000673
so part of: LOC107321557
location: complement(join(58636..58777,58908..59040,59340..59423,59729..59818,60037..60126,60231..60333,60477..60551,60946..61036,61121..61325,61418..61511,62341..62400,62599..62769,62882..63048,63329..63494,63853..63969,64073..64229,64364..64439,64678..64875,65497..65586,65662..65713,65997..66197,66640..66779,66941..67011,67115..67229,67462..67656,67949..68020,68184..68310,68560..68715,69971..70156,70653..70838,70926..71096,71659..71771,72925..73048,73144..73252,73879..73975,74045..74127,74643..74731,74829..74899,75186..75363,75522..75711,76017..76096))
location: region:58636-76096:-1
so has part: feature:76017-76096:-1:exon
so has part: feature:75522-75711:-1:exon
so has part: feature:75186-75363:-1:exon
so has part: feature:74829-74899:-1:exon
so has part: feature:74643-74731:-1:exon
so has part: feature:74045-74127:-1:exon
so has part: feature:73879-73975:-1:exon
so has part: feature:73144-73252:-1:exon
so has part: feature:72925-73048:-1:exon
so has part: feature:71659-71771:-1:exon
so has part: feature:70926-71096:-1:exon
so has part: feature:70653-70838:-1:exon
so has part: feature:69971-70156:-1:exon
so has part: feature:68560-68715:-1:exon
so has part: feature:68184-68310:-1:exon
so has part: feature:67949-68020:-1:exon
so has part: feature:67462-67656:-1:exon
so has part: feature:67115-67229:-1:exon
so has part: feature:66941-67011:-1:exon
so has part: feature:66640-66779:-1:exon
so has part: feature:65997-66197:-1:exon
so has part: feature:65662-65713:-1:exon
so has part: feature:65497-65586:-1:exon
so has part: feature:64678-64875:-1:exon
so has part: feature:64364-64439:-1:exon
so has part: feature:64073-64229:-1:exon
so has part: feature:63853-63969:-1:exon
so has part: feature:63329-63494:-1:exon
so has part: feature:62882-63048:-1:exon
so has part: feature:62599-62769:-1:exon
so has part: feature:62341-62400:-1:exon
so has part: feature:61418-61511:-1:exon
so has part: feature:61121-61325:-1:exon
so has part: feature:60946-61036:-1:exon
so has part: feature:60477-60551:-1:exon
so has part: feature:60231-60333:-1:exon
so has part: feature:60037-60126:-1:exon
so has part: feature:59729-59818:-1:exon
so has part: feature:59340-59423:-1:exon
so has part: feature:58908-59040:-1:exon
so has part: feature:58636-58777:-1:exon

XP_015734062.1
type: Protein
SIO_000068: ncbiprotein

position:58636:-1
position: 58636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76096:-1
position: 76096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76017-76096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75522-75711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75186-75363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74829-74899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74643-74731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74045-74127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73879-73975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73144-73252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72925-73048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71659-71771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70926-71096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70653-70838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69971-70156:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68560-68715:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68184-68310:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67949-68020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67462-67656:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67115-67229:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:66941-67011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:66640-66779:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:65997-66197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65662-65713:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65497-65586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64678-64875:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64364-64439:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:64073-64229:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:63853-63969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:63329-63494:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:62882-63048:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:62599-62769:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:62341-62400:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:61418-61511:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:61121-61325:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:60946-61036:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:60477-60551:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:60231-60333:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:60037-60126:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:59729-59818:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:59340-59423:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:58908-59040:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:58636-58777:-1:exon

LOC107321557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C4-like isoform X1
translation: MGPPWAFSLFLLLFLTKLMEGSSQDPELVLVAPRRVALGTPMGLLVASVGPVTGTVTAWAEGDRGAGPCALPVPFALTAHNNFNQLLQIEVTPVQAERCGALWGRGLLLEAHSPRLPPPGTQSLRVALGGPRGHLIVQTDKPLYAPRQTVRFRVFSMDPNLQPNPEPVLVTITNPLGARVREVQRVPLDTVLSDQLVLPDIALPGTWHIRAQLAASPNTNSSTAFEVRKYVLPGFEVSIRPERGFIVLSDPEPAPLRVHLHVQFPDGAPVWGRAQLRVGLRDAGGQGGRFLRGLEQQCQVTEGHASMEVSPVGVAKAAGVALTDLQGALLRLTVGVVESAGGELVERELLVPLVLSQWMLQLQKSARFFVPGAPYTLLGRVLQAGGVTAPGVPVKVTVGVTGAPSPPLIELRADNSGDIIVPINVPKGANRMELSVEAGQPGATPARAQLMVTPMTAVSGQFLVLGGPRGSVRPGEELRLQLHHMGPPPTPKRFHLLAMARGRVVAAHTVASQVTLTEVALPVTADMAPYLHVVAFFLSGGNVVAAAWGGAVQGGCDEQVQVKVPPRGTTLRPQDPMMVTVTTGTPVTVAIGAIDTTVLNLEPRHRLNAAKVEAVLGSSDLGCSHRGGPDAVGVFGAAGLVLGWRGGSPTAQVAPHCPLAPTRQRRSLELLKLLEEKAGPWRNNTVMWRCCRDGATVLPIRATCQQRGQRVTKVGGCQDAFLQCCEVAQNLRRKGQSRGLGRVLEAQLAEQLLDDDEDVPTRSFFPESWLWRRIRVTGTKRLSVLLPDSITTWEIQAVAIVPGHGLCVAEPQRVTVTQDVRVALRLPPSIRPREQLQLQPLIHSRLPRSINVTVSLSAVEGVCAALEGVPQMLELPPGRAVAAPLTLVALHPGDIPITITARGPWGLGDRITRVLHVEPEGELHLEESTYVLDTDDKRSRSLKLPGDVPAEIVPDGDFSMSIRVSGRVPGWALQGALGVGDTLLRSPRGCGEQSLMSMAPTAAALRFLDESEGWGQLPPGHRQRGLRTLQQGFERVQSFRKSDGSYGAWLHRDSSTWLTALVLRVLALSRTYLPVAASGPAESLRWVLEQQRPDGAFLEHRAVIHREMQGGVADPGPEATVSLTAFVVVALHGARALLPQDSPELPLLDKSLSRASTFLRGRVEQLGTYGTAITSYALTLVDTTPPGPHPAVERLRGMARSAHGGRATFWPSGGPAATVEATGYALLALLQSRNIAGAGRAARWLRQQSNYGGGFHSTQDTVVALEALAQMWLHWGRGSSSEMNLGLSWPGSARGKAGGTRVTLKPGLEPLEQELQVPLGSPVTVQVEGHGEGTLTVLRQFRLLSPPNATCQALHLEVAITGPILYHADEDYEGYDYEEAEPKEGEEPMEGAGPIEGEGAADDPTPFSPISSWDARKRHRRSTQSSAHEVAFLVCFWRSPEVVLTGMVVVEISLLSGFSPHRTDLDKLRDVVDHWISHYELDGNQLVLYLDEVPSERQCLSFGATQDVAVGHMQPAMAAIYDYYEPGQRCTIFYNAPQRSSTIATLCSPKICECAQGGCPHAQRKTQDVTADDRHDFACYSPRVDYALVVRVLSQSEIGAFVAFETEIKEVLFGGQDTTAAPGERRRLLVRKSCPLRLQPHNIYLVMGGSGGTRDPEGRPQFLLGPNSWVEEVPSPGHCRATRLRGHCTQLQEFITRLSQLGCQL
SIO_010081: LOC107321557
subclass of: SO_0000673
so part of: LOC107321557
location: complement(join(58636..58777,58908..59040,59340..59423,59729..59818,60037..60126,60231..60333,60477..60551,60946..61036,61121..61328,61418..61511,62341..62400,62599..62769,62882..63048,63329..63494,63853..63969,64073..64229,64364..64439,64678..64875,65497..65586,65662..65713,65997..66197,66640..66779,66941..67011,67115..67229,67462..67656,67949..68020,68184..68310,68560..68715,69971..70156,70653..70838,70926..71096,71659..71771,72925..73048,73144..73252,73879..73975,74045..74127,74643..74731,74829..74899,75186..75363,75522..75711,76017..76096))
location: region:58636-76096:-1
so has part: feature:76017-76096:-1:exon
so has part: feature:75522-75711:-1:exon
so has part: feature:75186-75363:-1:exon
so has part: feature:74829-74899:-1:exon
so has part: feature:74643-74731:-1:exon
so has part: feature:74045-74127:-1:exon
so has part: feature:73879-73975:-1:exon
so has part: feature:73144-73252:-1:exon
so has part: feature:72925-73048:-1:exon
so has part: feature:71659-71771:-1:exon
so has part: feature:70926-71096:-1:exon
so has part: feature:70653-70838:-1:exon
so has part: feature:69971-70156:-1:exon
so has part: feature:68560-68715:-1:exon
so has part: feature:68184-68310:-1:exon
so has part: feature:67949-68020:-1:exon
so has part: feature:67462-67656:-1:exon
so has part: feature:67115-67229:-1:exon
so has part: feature:66941-67011:-1:exon
so has part: feature:66640-66779:-1:exon
so has part: feature:65997-66197:-1:exon
so has part: feature:65662-65713:-1:exon
so has part: feature:65497-65586:-1:exon
so has part: feature:64678-64875:-1:exon
so has part: feature:64364-64439:-1:exon
so has part: feature:64073-64229:-1:exon
so has part: feature:63853-63969:-1:exon
so has part: feature:63329-63494:-1:exon
so has part: feature:62882-63048:-1:exon
so has part: feature:62599-62769:-1:exon
so has part: feature:62341-62400:-1:exon
so has part: feature:61418-61511:-1:exon
so has part: feature:61121-61328:-1:exon
so has part: feature:60946-61036:-1:exon
so has part: feature:60477-60551:-1:exon
so has part: feature:60231-60333:-1:exon
so has part: feature:60037-60126:-1:exon
so has part: feature:59729-59818:-1:exon
so has part: feature:59340-59423:-1:exon
so has part: feature:58908-59040:-1:exon
so has part: feature:58636-58777:-1:exon

XP_015734061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76017-76096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75522-75711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75186-75363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74829-74899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74643-74731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74045-74127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73879-73975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73144-73252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72925-73048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71659-71771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70926-71096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70653-70838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69971-70156:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68560-68715:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68184-68310:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67949-68020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67462-67656:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67115-67229:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:66941-67011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:66640-66779:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:65997-66197:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65662-65713:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65497-65586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64678-64875:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64364-64439:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:64073-64229:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:63853-63969:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:63329-63494:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:62882-63048:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:62599-62769:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:62341-62400:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:61418-61511:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:61121-61328:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:60946-61036:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:60477-60551:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:60231-60333:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:60037-60126:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:59729-59818:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:59340-59423:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:58908-59040:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:58636-58777:-1:exon

LOC116654147
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79801..80459
location: region:79801-80459:1
so has part: feature:79801-80459:1:exon
subclass of: SO_0000010

116654147
type: Gene
SIO_000068: ncbigene

position:79801:1
position: 79801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80459:1
position: 80459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79801-80459:1:exon

LOC116654147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654147
product: class I histocompatibility antigen, F10 alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_032448002.1
SIO_010081: LOC116654147
subclass of: SO_0000673
so part of: LOC116654147
location: join(79801..80105,80215..80459)
location: region:79801-80459:1
so has part: feature:79801-80105:1:exon
so has part: feature:80215-80459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79801-80105:1:exon

position:80105:1
position: 80105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80215-80459:1:exon

position:80215:1
position: 80215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like
translation: MGSWGALELGLLLCAVCGAAGELHTLRYFQTAMTDPGPELPWFFEVGYVDGEIFMHYNSTGRRYVPRTEWIKAPGAVDP
SIO_010081: LOC116654147
subclass of: SO_0000673
so part of: LOC116654147
location: join(80042..80105,80215..80390)
location: region:80042-80390:1
so has part: feature:80042-80105:1:exon
so has part: feature:80215-80390:1:exon

XP_032303893.1
type: Protein
SIO_000068: ncbiprotein

position:80042:1
position: 80042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80390:1
position: 80390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80042-80105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80215-80390:1:exon

LOC107321565
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81310..84401
location: region:81310-84401:1
so has part: feature:81310-84401:1:exon
subclass of: SO_0000010

107321565
type: Gene
SIO_000068: ncbigene

position:81310:1
position: 81310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84401:1
position: 84401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81310-84401:1:exon

LOC107321565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004309084.1
SIO_010081: LOC107321565
so part of: LOC107321565
location: join(81310..81322,81410..81586,82108..82712,83112..83983,84072..84401)
location: region:81310-84401:1
so has part: feature:81310-81322:1:exon
so has part: feature:81410-81586:1:exon
so has part: feature:82108-82712:1:exon
so has part: feature:83112-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81310-81322:1:exon

position:81322:1
position: 81322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81410-81586:1:exon

position:81410:1
position: 81410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81586:1
position: 81586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82108-82712:1:exon

position:82108:1
position: 82108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82712:1
position: 82712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83112-83983:1:exon

position:83112:1
position: 83112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83983:1
position: 83983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

position:84072:1
position: 84072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004309085.1
SIO_010081: LOC107321565
so part of: LOC107321565
location: join(81311..81586,82108..82712,83112..83737,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82712:1:exon
so has part: feature:83112-83737:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

position:81311:1
position: 81311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83112-83737:1:exon

position:83737:1
position: 83737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83921-83983:1:exon

position:83921:1
position: 83921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_004309083.1
SIO_010081: LOC107321565
so part of: LOC107321565
location: join(81311..81586,82108..82514,82632..82712,83112..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82514:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83112-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82514:1:exon

position:82514:1
position: 82514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

position:82632:1
position: 82632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83112-83983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004309087.1
SIO_010081: LOC107321565
so part of: LOC107321565
location: join(81311..81586,82108..82514,82632..82712,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82514:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032447994.1
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81311..81586,82108..82224,82367..82437,82632..82712,83112..83246,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83112-83246:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

position:82224:1
position: 82224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

position:82367:1
position: 82367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82437:1
position: 82437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83112-83246:1:exon

position:83246:1
position: 83246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032447996.1
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81311..81586,82108..82224,82367..82437,82632..82712,83139..83246,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83139-83246:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83139-83246:1:exon

position:83139:1
position: 83139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032447997.1
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81311..81586,82108..82224,82367..82437,82632..82712,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032447993.1
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81311..81586,82108..82224,82632..82712,83112..83246,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83112-83246:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83112-83246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004309086.1
SIO_010081: LOC107321565
so part of: LOC107321565
location: join(81311..81586,82108..82224,82632..82712,83139..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83139-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83139-83983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321565
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032447995.1
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81311..81586,82108..82224,82632..82712,83921..83983,84072..84401)
location: region:81311-84401:1
so has part: feature:81311-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81311-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84401:1:exon

LOC107321565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A-like isoform X1
translation: MEVENSENVPSPTHPPAVINAADDDELFPQEGKETKPPVQQPAEGNHHGLRIISTRKSNAETKQDHSLNFGMKTLEEIKVKKQKDKTRKQSTLSVCSLGSEGPSGVPAHPPQSRTVPVPEENMQTVVRAVTLSAKQGEEPVIRWNTTEKPGKRKSSVAWNCSWEAKQTVWSSWRTRVQLLPNQWPKRSS
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81511..81586,82108..82224,82632..82712,83112..83246,83921..83983,84072..84169)
location: region:81511-84169:1
so has part: feature:81511-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83112-83246:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84169:1:exon

XP_032303884.1
type: Protein
SIO_000068: ncbiprotein

position:81511:1
position: 81511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84169:1
position: 84169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81511-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83112-83246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84072-84169:1:exon

LOC107321565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A-like isoform X3
translation: MEVENSENVPSPTHPPAVINAADDDELFPQEGKETKPPVQQPAEGNHHGLRIISTRKSNAETKQDHSLNFGMKTLEEIKVKKQKDKTRKQSREEPVIRWNTTEKPGKRKSSVAWNCSWEAKQTVWSSWRTRVQLLPNQWPKRSS
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81511..81586,82108..82224,82632..82712,83921..83983,84072..84169)
location: region:81511-84169:1
so has part: feature:81511-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83921-83983:1:exon
so has part: feature:84072-84169:1:exon

XP_032303886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81511-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83921-83983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84072-84169:1:exon

LOC107321565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321565 isoform X2
translation: MLRMMMSCFLRREKKQNHLSSNQLKETIMDCGSFPLGNLMLRPNKIRKDNSFVYIIKARRGHRTEFKRLSQFEFWNENTRRNQSEETKGQNKKTKHTVCLFTWIRRSFRSSCSSAPISDCSCARGEYADSGQSCDAVCKAGGGARDSMEYY
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81569..81586,82108..82224,82367..82437,82632..82712,83112..83246,83921..83954)
location: region:81569-83954:1
so has part: feature:81569-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83112-83246:1:exon
so has part: feature:83921-83954:1:exon

XP_032303885.1
type: Protein
SIO_000068: ncbiprotein

position:81569:1
position: 81569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83954:1
position: 83954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81569-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83112-83246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83921-83954:1:exon

LOC107321565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321565 isoform X4
translation: MLRMMMSCFLRREKKQNHLSSNQLKETIMDCGSFPLGNLMLRPNKIRKDNSFVYIIKARRGHRTEFKRLSQFEFWNENTRRNQSEETKGQNKKTKQRSFRSSCSSAPISDCSCARGEYADSGQSCDAVCKAGGGARDSMEYY
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81569..81586,82108..82224,82367..82437,82632..82712,83139..83246,83921..83954)
location: region:81569-83954:1
so has part: feature:81569-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83139-83246:1:exon
so has part: feature:83921-83954:1:exon

XP_032303887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81569-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83139-83246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83921-83954:1:exon

LOC107321565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321565 isoform X5
translation: MLRMMMSCFLRREKKQNHLSSNQLKETIMDCGSFPLGNLMLRPNKIRKDNSFVYIIKARRGHRTEFKRLSQFEFWNENTRRNQSEETKGQNKKTKQGGARDSMEYY
SIO_010081: LOC107321565
subclass of: SO_0000673
so part of: LOC107321565
location: join(81569..81586,82108..82224,82367..82437,82632..82712,83921..83954)
location: region:81569-83954:1
so has part: feature:81569-81586:1:exon
so has part: feature:82108-82224:1:exon
so has part: feature:82367-82437:1:exon
so has part: feature:82632-82712:1:exon
so has part: feature:83921-83954:1:exon

XP_032303888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81569-81586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82108-82224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82367-82437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82632-82712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83921-83954:1:exon

LOC107321569
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89031..90013
location: region:89031-90013:1
so has part: feature:89031-90013:1:exon
subclass of: SO_0000011

107321569
type: Gene
SIO_000068: ncbigene

position:89031:1
position: 89031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90013:1
position: 90013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89031-90013:1:exon

LOC107321569
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107321569
product: uncharacterized LOC107321569
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XR_004309088.1
SIO_010081: LOC107321569
subclass of: SO_0000673
so part of: LOC107321569
location: join(89031..89063,89223..89255,89398..90013)
location: region:89031-90013:1
so has part: feature:89031-89063:1:exon
so has part: feature:89223-89255:1:exon
so has part: feature:89398-90013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89031-89063:1:exon

position:89063:1
position: 89063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89223-89255:1:exon

position:89223:1
position: 89223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89255:1
position: 89255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89398-90013:1:exon

position:89398:1
position: 89398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321563
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90618..99152
location: region:90618-99152:1
so has part: feature:90618-99152:1:exon
subclass of: SO_0000010

107321563
type: Gene
SIO_000068: ncbigene

position:90618:1
position: 90618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99152:1
position: 99152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90618-99152:1:exon

LOC107321563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321563
product: class I histocompatibility antigen, F10 alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 170 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448006.1
SIO_010081: LOC107321563
subclass of: SO_0000673
so part of: LOC107321563
location: join(90618..90730,97270..97364,97474..97743,97974..98246,98337..98609,98683..98784,98902..99152)
location: region:90618-99152:1
so has part: feature:90618-90730:1:exon
so has part: feature:97270-97364:1:exon
so has part: feature:97474-97743:1:exon
so has part: feature:97974-98246:1:exon
so has part: feature:98337-98609:1:exon
so has part: feature:98683-98784:1:exon
so has part: feature:98902-99152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90618-90730:1:exon

position:90730:1
position: 90730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97270-97364:1:exon

position:97270:1
position: 97270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97364:1
position: 97364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97474-97743:1:exon

position:97474:1
position: 97474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97743:1
position: 97743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97974-98246:1:exon

position:97974:1
position: 97974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98246:1
position: 98246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98337-98609:1:exon

position:98337:1
position: 98337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98609:1
position: 98609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98683-98784:1:exon

position:98683:1
position: 98683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98784:1
position: 98784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:98902-99152:1:exon

position:98902:1
position: 98902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321563
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:98351..98353,aa:OTHER)
transl except: (pos:98940..98942,aa:OTHER)
product: LOW QUALITY PROTEIN: class I histocompatibility antigen, F10 alpha chain-like
translation: MGSWGALELGLLLCAVCGAAGGECGRTGTPPSPSGAGCVGSRSAAMGLCGMLGLLLCAVCGAAGELHSMRYIETAMTDPGPGLPWFYEVGYVDGEIFVHYDSTTRREVPRTEWMKAPGAVDPEYWDRNTQRALSNEQNSRVSLVNAARRHNQSGGSHTWQRMLGCDILEDGTTRGYDQVAYNGRDFIAFDKDTMMFTAAVPEAVPTKRAWEEPGYAERRKHYLEQTCVQWLRRYVEHGKAELGRTEQPEVXVWGKKADGILTLSCHAHGFYPQPIAVSWMKDSMVLGQDTHSGGIVPNSDGTYHTWITIDALPGDADKYQCRVEHASLPQPGLYSWERPQSYVLPIVVGVVVALVAIMAGIGFIIYRRHAGKKEKGYNTAPSEXLGQHCPPPLPGARAVLGSSLSPRVPLPVFWGCSMPHSEHRAGAHGSSSLTGQDGGSSSSCTGVVWGWVL
SIO_010081: LOC107321563
subclass of: SO_0000673
so part of: LOC107321563
location: join(90633..90730,97270..97364,97474..97743,97974..98246,98337..98609,98683..98784,98902..99152)
location: region:90633-99152:1
so has part: feature:90633-90730:1:exon
so has part: feature:97270-97364:1:exon
so has part: feature:97474-97743:1:exon
so has part: feature:97974-98246:1:exon
so has part: feature:98337-98609:1:exon
so has part: feature:98683-98784:1:exon
so has part: feature:98902-99152:1:exon

XP_032303897.1
type: Protein
SIO_000068: ncbiprotein

position:90633:1
position: 90633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90633-90730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97270-97364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97474-97743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97974-98246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98337-98609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98683-98784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98902-99152:1:exon

LOC116654146
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92584..97291
location: region:92584-97291:1
so has part: feature:92584-97291:1:exon
subclass of: SO_0000010

116654146
type: Gene
SIO_000068: ncbigene

position:92584:1
position: 92584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97291:1
position: 97291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92584-97291:1:exon

LOC116654146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654146
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447999.1
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(92584..92804,93007..93183,93704..93820,93958..94028,94223..94303,94703..94837,94993..95059,95519..95581,95670..97291)
location: region:92584-97291:1
so has part: feature:92584-92804:1:exon
so has part: feature:93007-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:93958-94028:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:94993-95059:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-97291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92584-92804:1:exon

position:92804:1
position: 92804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93007-93183:1:exon

position:93007:1
position: 93007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93183:1
position: 93183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93704-93820:1:exon

position:93704:1
position: 93704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93820:1
position: 93820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93958-94028:1:exon

position:93958:1
position: 93958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94028:1
position: 94028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94223-94303:1:exon

position:94223:1
position: 94223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94303:1
position: 94303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94703-94837:1:exon

position:94703:1
position: 94703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94837:1
position: 94837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94993-95059:1:exon

position:94993:1
position: 94993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95059:1
position: 95059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95519-95581:1:exon

position:95519:1
position: 95519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95581:1
position: 95581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95670-97291:1:exon

position:95670:1
position: 95670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654146
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032448000.1
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(92584..92804,93007..93183,93704..93820,93958..94028,94223..94303,94703..94837,95519..95581,95670..97288)
location: region:92584-97288:1
so has part: feature:92584-92804:1:exon
so has part: feature:93007-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:93958-94028:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-97288:1:exon

position:97288:1
position: 97288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92584-92804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93007-93183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93958-94028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94703-94837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95519-95581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95670-97288:1:exon

LOC116654146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654146
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032448001.1
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(92584..92804,93007..93183,93704..93820,94223..94303,95519..95581,95670..97284)
location: region:92584-97284:1
so has part: feature:92584-92804:1:exon
so has part: feature:93007-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-97284:1:exon

position:97284:1
position: 97284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92584-92804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93007-93183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95519-95581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95670-97284:1:exon

LOC116654146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654146
product: zinc finger CCCH domain-containing protein 11A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032447998.1
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(92584..92804,93007..93183,93704..93820,94223..94303,94703..94837,95519..95581,95670..97282)
location: region:92584-97282:1
so has part: feature:92584-92804:1:exon
so has part: feature:93007-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-97282:1:exon

position:97282:1
position: 97282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92584-92804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93007-93183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94703-94837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95519-95581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95670-97282:1:exon

LOC116654146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A-like isoform X1
translation: MEVENSENVPSPTHPPAVINAADDDEQLPEEGEETKTPVQQPAEGNHHGLWVISTRKSNAETKQDHSLNFGMKTLEEIKVKKQKDKTRKQSTLSVCSLGSEGPSGLPAHPPQSRTVPVPEENMQTVVRAVTLSAKQGEEPVIRWNTAEKPGKRKSSVAWNCSWEAKQTVWSSQRT
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(93108..93183,93704..93820,94223..94303,94703..94837,95519..95581,95670..95725)
location: region:93108-95725:1
so has part: feature:93108-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-95725:1:exon

XP_032303889.1
type: Protein
SIO_000068: ncbiprotein

position:93108:1
position: 93108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95725:1
position: 95725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93108-93183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94703-94837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95519-95581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95670-95725:1:exon

LOC116654146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A-like isoform X4
translation: MEVENSENVPSPTHPPAVINAADDDEQLPEEGEETKTPVQQPAEGNHHGLWVISTRKSNAETKQDHSLNFGMKTLEEIKVKKQKDKTRKQSREEPVIRWNTAEKPGKRKSSVAWNCSWEAKQTVWSSQRT
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(93108..93183,93704..93820,94223..94303,95519..95581,95670..95725)
location: region:93108-95725:1
so has part: feature:93108-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:95519-95581:1:exon
so has part: feature:95670-95725:1:exon

XP_032303892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93108-93183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95519-95581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95670-95725:1:exon

LOC116654146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116654146 isoform X3
translation: MLRMMMSSFLRREKKQKHLSSNQLKETIMDCGSFPLGNLMLRPNKIRKVNSFVYIIKARRGHRTEFKRLSQFEFWNENTRRNQSEETKGQNKKTKHTVCLFTWIRRSFRTSCSSAPISDCSCARGEYADSGQSCDAVCKAGGGARDSMEYC
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(93166..93183,93704..93820,93958..94028,94223..94303,94703..94837,95519..95552)
location: region:93166-95552:1
so has part: feature:93166-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:93958-94028:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:95519-95552:1:exon

XP_032303891.1
type: Protein
SIO_000068: ncbiprotein

position:93166:1
position: 93166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95552:1
position: 95552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93166-93183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93958-94028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94703-94837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95519-95552:1:exon

LOC116654146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116654146 isoform X2
translation: MLRMMMSSFLRREKKQKHLSSNQLKETIMDCGSFPLGNLMLRPNKIRKVNSFVYIIKARRGHRTEFKRLSQFEFWNENTRRNQSEETKGQNKKTKHTVCLFTWIRRSFRTSCSSAPISDCSCARGEYADSGQSCDAVCKAGLSLAGALFCCHKGSRNNFYEPLGRSP
SIO_010081: LOC116654146
subclass of: SO_0000673
so part of: LOC116654146
location: join(93166..93183,93704..93820,93958..94028,94223..94303,94703..94837,94993..95059,95519..95533)
location: region:93166-95533:1
so has part: feature:93166-93183:1:exon
so has part: feature:93704-93820:1:exon
so has part: feature:93958-94028:1:exon
so has part: feature:94223-94303:1:exon
so has part: feature:94703-94837:1:exon
so has part: feature:94993-95059:1:exon
so has part: feature:95519-95533:1:exon

XP_032303890.1
type: Protein
SIO_000068: ncbiprotein

position:95533:1
position: 95533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93166-93183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93704-93820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93958-94028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94223-94303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94703-94837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94993-95059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95519-95533:1:exon

TAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100035..104617)
location: region:100035-104617:-1
so has part: feature:100035-104617:-1:exon
subclass of: SO_0000010

107321559
type: Gene
SIO_000068: ncbigene

position:100035:-1
position: 100035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104617:-1
position: 104617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100035-104617:-1:exon

TAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TAP1
product: transporter 1, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_015878578.2
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(100035..100518,100666..100802,100874..101033,101238..101411,101808..101993,102085..102213,102668..102865,103224..103429,103513..103643,103726..103828,104428..104617))
location: region:100035-104617:-1
so has part: feature:104428-104617:-1:exon
so has part: feature:103726-103828:-1:exon
so has part: feature:103513-103643:-1:exon
so has part: feature:103224-103429:-1:exon
so has part: feature:102668-102865:-1:exon
so has part: feature:102085-102213:-1:exon
so has part: feature:101808-101993:-1:exon
so has part: feature:101238-101411:-1:exon
so has part: feature:100874-101033:-1:exon
so has part: feature:100666-100802:-1:exon
so has part: feature:100035-100518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104428-104617:-1:exon

position:104428:-1
position: 104428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103726-103828:-1:exon

position:103726:-1
position: 103726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103828:-1
position: 103828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103513-103643:-1:exon

position:103513:-1
position: 103513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103643:-1
position: 103643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103224-103429:-1:exon

position:103224:-1
position: 103224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103429:-1
position: 103429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102668-102865:-1:exon

position:102668:-1
position: 102668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102865:-1
position: 102865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102085-102213:-1:exon

position:102085:-1
position: 102085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102213:-1
position: 102213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101808-101993:-1:exon

position:101808:-1
position: 101808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101993:-1
position: 101993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:101238-101411:-1:exon

position:101238:-1
position: 101238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101411:-1
position: 101411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:100874-101033:-1:exon

position:100874:-1
position: 100874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101033:-1
position: 101033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:100666-100802:-1:exon

position:100666:-1
position: 100666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100802:-1
position: 100802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:100035-100518:-1:exon

position:100518:-1
position: 100518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 1
translation: MSDSPVSEKLRPLPGIGIGVGVGSGAAMGTMGAGRRLLLSLSPESRRCAAGMGLMAASALGEMAVPYYMGRASDWVAREDELAAILPMVLLGLSSAVTELVCDVIFVGTLSRTQSRLQRRVFAAVLRQDIAELRADGAGDVATRVTRDAEDVREELGEALSLLLWYLARGICLFATMAWLSPRMALLTMLLLPLLLALPRAMGRFRQGLAPQMQKAHARASEVAVETFQAMATVRSFANEDGVAACYRQRLQQSHSLEKKDVAFYIVNLWTSGFSALALKMGILYYGGQLVAAGTVSTGDLVTFLLYQMQFTDVIEVLLCYYPTLTKAVGSSEKIFEFLDREPKVAPSGTMAPSELQGHLQLEDVWFSYPGRQEPVLKGVSLELHPGEVLALLGPPGAGKSTLVALVSRLHQPTAGRLLLDGHPLPTYQHSYLCRQVAVVPQEPLLFARSLHDNISYGSGGCSRDQVTAAARRVGAHNFITRLPQGYDTEVGELGGQLSGGQRQAVAIARALLRDPRILILDEHTSALDAESQQQVEQEMLAARGKGRAVLMVTGRAALAARAQRVAVLEGGEVRQQGPPDEVLRPGSRTWHLLQDWGQKGATGEGDRGSRGEG
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(100279..100518,100666..100802,100874..101033,101238..101411,101808..101993,102085..102213,102668..102865,103224..103429,103513..103643,103726..103828,104428..104608))
location: region:100279-104608:-1
so has part: feature:104428-104608:-1:exon
so has part: feature:103726-103828:-1:exon
so has part: feature:103513-103643:-1:exon
so has part: feature:103224-103429:-1:exon
so has part: feature:102668-102865:-1:exon
so has part: feature:102085-102213:-1:exon
so has part: feature:101808-101993:-1:exon
so has part: feature:101238-101411:-1:exon
so has part: feature:100874-101033:-1:exon
so has part: feature:100666-100802:-1:exon
so has part: feature:100279-100518:-1:exon

XP_015734064.2
type: Protein
SIO_000068: ncbiprotein

position:100279:-1
position: 100279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104608:-1
position: 104608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104428-104608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103726-103828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103513-103643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103224-103429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102668-102865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102085-102213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101808-101993:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101238-101411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100874-101033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100666-100802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100279-100518:-1:exon

TAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 105694..109384
location: region:105694-109384:1
so has part: feature:105694-109384:1:exon
subclass of: SO_0000010

107321558
type: Gene
SIO_000068: ncbigene

position:105694:1
position: 105694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109384:1
position: 109384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105694-109384:1:exon

TAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TAP2
product: transporter 2, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 13 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_032447977.1
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(105694..106404,106958..107088,107158..107363,107653..107850,107925..108053,108184..108546,108622..108781,108855..108991,109071..109384)
location: region:105694-109384:1
so has part: feature:105694-106404:1:exon
so has part: feature:106958-107088:1:exon
so has part: feature:107158-107363:1:exon
so has part: feature:107653-107850:1:exon
so has part: feature:107925-108053:1:exon
so has part: feature:108184-108546:1:exon
so has part: feature:108622-108781:1:exon
so has part: feature:108855-108991:1:exon
so has part: feature:109071-109384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105694-106404:1:exon

position:106404:1
position: 106404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106958-107088:1:exon

position:106958:1
position: 106958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107088:1
position: 107088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107158-107363:1:exon

position:107158:1
position: 107158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107363:1
position: 107363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107653-107850:1:exon

position:107653:1
position: 107653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107850:1
position: 107850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107925-108053:1:exon

position:107925:1
position: 107925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108053:1
position: 108053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108184-108546:1:exon

position:108184:1
position: 108184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108546:1
position: 108546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108622-108781:1:exon

position:108622:1
position: 108622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108781:1
position: 108781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108855-108991:1:exon

position:108855:1
position: 108855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108991:1
position: 108991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109071-109384:1:exon

position:109071:1
position: 109071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2
translation: MAVPPHILRLSCTLLLADLALMLVLTHFFPALAQLGQMSSWLEAVLRLLVLGGAKQLLAPKGPHGAAVLLSLTPAIFLTLRGYMGLPGAAPVLLATATPSWLVLTHGTALVALLTWSLLAPTVAVGAKDAETWVPLKRLLALAWPEWPLLSCAFFFLALAALGETSVPYFTGRALDVLRQGDGLTTFTAAVGLMCLASASSSLFAGCRGGLFTFIGYRFVLRTRDQLFSSLVYRDLAFFQKTTAAELSSRLTTDVTLASKVLTLNINVMLRTLGQVLGLCAFMLGLSPRLTLLALLEVPLAVAARKVYDSRHQMLQRAVLDAAANTGTAVQESISSIETVRVFNGEEEEERRYRQALDRTLRLRDQRDTEKAIFVLIQRALQLAVQALVLYCGHQQLHDGTLTAGSLVAFILYQTNAGSCVQALAYCYGDLLSNAAAACKVFDYLDRERAVGTGGTYVPTKLQGHITFHRVSFAYPTRPEHLVLQDVTFELRPGEVTALAGLNGSGKSTCVALLERFYEPKAGEVLLDGVPLRDYEHCYLHRQVALVGQEPVLFSGSIRDNIAYGMEDCEEEEIIAAARAAGALGFISALEQGFGTDVGERGGQLSAGQKQRIAIARALVRHPTVLILDEATSALDEDGDVMLQQWVRNGGDQSMLLISHQPQMLEKADHVVVLEHDTMAEMGTPTELRTRSGSYSRLLQH
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(105803..106404,106958..107088,107158..107363,107653..107850,107925..108053,108184..108546,108622..108781,108855..108991,109071..109250)
location: region:105803-109250:1
so has part: feature:105803-106404:1:exon
so has part: feature:106958-107088:1:exon
so has part: feature:107158-107363:1:exon
so has part: feature:107653-107850:1:exon
so has part: feature:107925-108053:1:exon
so has part: feature:108184-108546:1:exon
so has part: feature:108622-108781:1:exon
so has part: feature:108855-108991:1:exon
so has part: feature:109071-109250:1:exon

XP_032303868.1
type: Protein
SIO_000068: ncbiprotein

position:105803:1
position: 105803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109250:1
position: 109250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105803-106404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106958-107088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107158-107363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107653-107850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107925-108053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108184-108546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108622-108781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108855-108991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109071-109250:1:exon

LOC107321530
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109710..124326)
location: region:109710-124326:-1
so has part: feature:109710-124326:-1:exon
subclass of: SO_0000010

107321530
type: Gene
SIO_000068: ncbigene

position:109710:-1
position: 109710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124326:-1
position: 124326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109710-124326:-1:exon

LOC107321530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321530
product: class I histocompatibility antigen, F10 alpha chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 127 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015878526.2
SIO_010081: LOC107321530
subclass of: SO_0000673
so part of: LOC107321530
location: complement(join(109710..110082,110242..110274,110392..110497,110577..110845,110945..111217,111398..111660,111769..111930,114916..114948,115695..115868,116104..116367,123642..124326))
location: region:109710-124326:-1
so has part: feature:123642-124326:-1:exon
so has part: feature:116104-116367:-1:exon
so has part: feature:115695-115868:-1:exon
so has part: feature:114916-114948:-1:exon
so has part: feature:111769-111930:-1:exon
so has part: feature:111398-111660:-1:exon
so has part: feature:110945-111217:-1:exon
so has part: feature:110577-110845:-1:exon
so has part: feature:110392-110497:-1:exon
so has part: feature:110242-110274:-1:exon
so has part: feature:109710-110082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123642-124326:-1:exon

position:123642:-1
position: 123642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116104-116367:-1:exon

position:116104:-1
position: 116104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116367:-1
position: 116367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115695-115868:-1:exon

position:115695:-1
position: 115695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115868:-1
position: 115868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114916-114948:-1:exon

position:114916:-1
position: 114916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114948:-1
position: 114948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111769-111930:-1:exon

position:111769:-1
position: 111769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111930:-1
position: 111930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111398-111660:-1:exon

position:111398:-1
position: 111398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111660:-1
position: 111660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110945-111217:-1:exon

position:110945:-1
position: 110945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111217:-1
position: 111217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:110577-110845:-1:exon

position:110577:-1
position: 110577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110845:-1
position: 110845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:110392-110497:-1:exon

position:110392:-1
position: 110392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110497:-1
position: 110497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:110242-110274:-1:exon

position:110242:-1
position: 110242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110274:-1
position: 110274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:109710-110082:-1:exon

position:110082:-1
position: 110082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321530
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(110742..110744),aa:OTHER)
product: LOW QUALITY PROTEIN: class I histocompatibility antigen, F10 alpha chain-like
translation: MGLCGMLGLLLCAVCGAAGEHHKLRFFTTAMTDPGPGLPWFVSVGYVDGEIFVHYDSTTRRTVPRTEWMAASMDQQYWDGQTEIGHISEPINRENLVTAARLYNRTGGSHTVQRMSGCDILEDNIIRGYYQIAYDGRDFIAFDKDTMTFTAAVPEAVPSKRALQEGMNENGYNVVRPRSPSSNWWSCGGGTNGIAGGSRNEDVRSGAERWGRGGLWRLGLLLCAVCGAAGELHTLRYFQTAMTDPGPELPWFFEVGXVDGEIFMHYNSTARRYVPRTEWMAASMDQQYWDGQTEIAQSNEQKDRVSLVNLARLYNQSGGSHTWQRMLGCDILEDGTTRGYHQYGYDGRDFIAFDKDTMTFTAAVPEAVPTKRKWEEGGDAERQKHYLEEICPQWLWRYVEHGKAELGRTEQPEVRVWGKEADGILTLSCRAHGFYPRPTLSAGXRDGAVLGQDTHSGGIVPNSYGTYHTLVTIDAVPGDGDKYQCCVEHASLPQPSLYSWPQPSLVPIIVRVVIPIVVIAITAGIGFTIYRRHAGKKEKGYNAAPSQDGGSSSSCTGVVCGWGGVPVLFVVLHQC
SIO_010081: LOC107321530
subclass of: SO_0000673
so part of: LOC107321530
location: complement(join(109991..110082,110242..110274,110392..110497,110577..110845,110945..111217,111398..111660,111769..111930,114916..114948,115695..115868,116104..116367,123642..123699))
location: region:109991-123699:-1
so has part: feature:123642-123699:-1:exon
so has part: feature:116104-116367:-1:exon
so has part: feature:115695-115868:-1:exon
so has part: feature:114916-114948:-1:exon
so has part: feature:111769-111930:-1:exon
so has part: feature:111398-111660:-1:exon
so has part: feature:110945-111217:-1:exon
so has part: feature:110577-110845:-1:exon
so has part: feature:110392-110497:-1:exon
so has part: feature:110242-110274:-1:exon
so has part: feature:109991-110082:-1:exon

XP_015734012.1
type: Protein
SIO_000068: ncbiprotein

position:109991:-1
position: 109991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123699:-1
position: 123699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123642-123699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116104-116367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115695-115868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114916-114948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111769-111930:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111398-111660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110945-111217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110577-110845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:110392-110497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:110242-110274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109991-110082:-1:exon

LOC107321531
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127190..131088)
location: region:127190-131088:-1
so has part: feature:127190-131088:-1:exon
subclass of: SO_0000010

107321531
type: Gene
SIO_000068: ncbigene

position:127190:-1
position: 127190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131088:-1
position: 131088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127190-131088:-1:exon

LOC107321531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321531
product: class I histocompatibility antigen, F10 alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015878527.1
SIO_010081: LOC107321531
subclass of: SO_0000673
so part of: LOC107321531
location: complement(join(127190..128984,129127..129159,129319..129351,129469..129576,129650..129686,131056..131088))
location: region:127190-131088:-1
so has part: feature:131056-131088:-1:exon
so has part: feature:129650-129686:-1:exon
so has part: feature:129469-129576:-1:exon
so has part: feature:129319-129351:-1:exon
so has part: feature:129127-129159:-1:exon
so has part: feature:127190-128984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131056-131088:-1:exon

position:131056:-1
position: 131056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129650-129686:-1:exon

position:129650:-1
position: 129650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129686:-1
position: 129686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129469-129576:-1:exon

position:129469:-1
position: 129469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129576:-1
position: 129576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129319-129351:-1:exon

position:129319:-1
position: 129319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129351:-1
position: 129351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129127-129159:-1:exon

position:129127:-1
position: 129127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129159:-1
position: 129159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127190-128984:-1:exon

position:128984:-1
position: 128984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like
translation: MKWRLCGSETQHASLPQPRLYSWERPQSNVLSIVAGVVGAILAIAILAGIGFIIYRCHAGKKEKGYNTAPSQDGGSSSSCTGSNQTI
SIO_010081: LOC107321531
subclass of: SO_0000673
so part of: LOC107321531
location: complement(join(128965..128984,129127..129159,129319..129351,129469..129576,129650..129686,131056..131088))
location: region:128965-131088:-1
so has part: feature:131056-131088:-1:exon
so has part: feature:129650-129686:-1:exon
so has part: feature:129469-129576:-1:exon
so has part: feature:129319-129351:-1:exon
so has part: feature:129127-129159:-1:exon
so has part: feature:128965-128984:-1:exon

XP_015734013.1
type: Protein
SIO_000068: ncbiprotein

position:128965:-1
position: 128965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131056-131088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129650-129686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129469-129576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129319-129351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129127-129159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128965-128984:-1:exon

LOC107321549
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132794..135972)
location: region:132794-135972:-1
so has part: feature:132794-135972:-1:exon
subclass of: SO_0000010

107321549
type: Gene
SIO_000068: ncbigene

position:132794:-1
position: 132794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135972:-1
position: 135972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132794-135972:-1:exon

LOC107321549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321549
product: HLA class II histocompatibility antigen, DM beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_015878564.2
SIO_010081: LOC107321549
subclass of: SO_0000673
so part of: LOC107321549
location: complement(join(132794..132892,132976..133011,133274..133393,133470..133754,134716..134997,135798..135972))
location: region:132794-135972:-1
so has part: feature:135798-135972:-1:exon
so has part: feature:134716-134997:-1:exon
so has part: feature:133470-133754:-1:exon
so has part: feature:133274-133393:-1:exon
so has part: feature:132976-133011:-1:exon
so has part: feature:132794-132892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135798-135972:-1:exon

position:135798:-1
position: 135798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134716-134997:-1:exon

position:134716:-1
position: 134716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134997:-1
position: 134997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133470-133754:-1:exon

position:133470:-1
position: 133470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133754:-1
position: 133754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133274-133393:-1:exon

position:133274:-1
position: 133274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133393:-1
position: 133393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132976-133011:-1:exon

position:132976:-1
position: 132976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133011:-1
position: 133011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132794-132892:-1:exon

position:132892:-1
position: 132892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain-like
translation: MLLLLGLLLGARGAGAFVMHVASSCPLAANGSLLDFELTVAFNKNPLVCYDPDVQRFNACDWKLLQGAAEQIAIALNNDSTWVKRAEARRQACSKLAAQFWAQTALRRTQPQVRIIPSQTGNPSTPIRLTCHVWGFYPPEVTIVWFHNGDMVGPGDHSPVSSIPNGNWTYQTQVTLSVAPKVGDIYTCSVQHDSLEEPLLEDWRPGLTLEVTLMVAVATVVMLLGLSLLLVGVHYWRAQPPAPGYTPLPGHNYPSGSI
SIO_010081: LOC107321549
subclass of: SO_0000673
so part of: LOC107321549
location: complement(join(132882..132892,132976..133011,133274..133393,133470..133754,134716..134997,135798..135840))
location: region:132882-135840:-1
so has part: feature:135798-135840:-1:exon
so has part: feature:134716-134997:-1:exon
so has part: feature:133470-133754:-1:exon
so has part: feature:133274-133393:-1:exon
so has part: feature:132976-133011:-1:exon
so has part: feature:132882-132892:-1:exon

XP_015734050.1
type: Protein
SIO_000068: ncbiprotein

position:132882:-1
position: 132882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135840:-1
position: 135840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135798-135840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134716-134997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133470-133754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133274-133393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132976-133011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132882-132892:-1:exon

LOC107321545
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136116..139573)
location: region:136116-139573:-1
so has part: feature:136116-139573:-1:exon
subclass of: SO_0000010

107321545
type: Gene
SIO_000068: ncbigene

position:136116:-1
position: 136116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139573:-1
position: 139573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136116-139573:-1:exon

LOC107321545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321545
product: HLA class II histocompatibility antigen, DM beta chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015878557.2
SIO_010081: LOC107321545
subclass of: SO_0000673
so part of: LOC107321545
location: complement(join(136116..136590,136690..136803,136876..137151,138091..138372,139208..139371,139466..139573))
location: region:136116-139573:-1
so has part: feature:139466-139573:-1:exon
so has part: feature:139208-139371:-1:exon
so has part: feature:138091-138372:-1:exon
so has part: feature:136876-137151:-1:exon
so has part: feature:136690-136803:-1:exon
so has part: feature:136116-136590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139466-139573:-1:exon

position:139466:-1
position: 139466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139208-139371:-1:exon

position:139208:-1
position: 139208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139371:-1
position: 139371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138091-138372:-1:exon

position:138091:-1
position: 138091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138372:-1
position: 138372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136876-137151:-1:exon

position:136876:-1
position: 136876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137151:-1
position: 137151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136690-136803:-1:exon

position:136690:-1
position: 136690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136803:-1
position: 136803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136116-136590:-1:exon

position:136590:-1
position: 136590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321545
product: HLA class II histocompatibility antigen, DM beta chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015878558.1
SIO_010081: LOC107321545
subclass of: SO_0000673
so part of: LOC107321545
location: complement(join(136116..136590,136690..136803,136876..137151,138091..138372,139466..139546))
location: region:136116-139546:-1
so has part: feature:139466-139546:-1:exon
so has part: feature:138091-138372:-1:exon
so has part: feature:136876-137151:-1:exon
so has part: feature:136690-136803:-1:exon
so has part: feature:136116-136590:-1:exon

position:139546:-1
position: 139546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139466-139546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138091-138372:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136876-137151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136690-136803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136116-136590:-1:exon

LOC107321545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain isoform X1
translation: MTAILRWQSLIPLYLPWGDVGGGGRDGTKRMKAATLPMGPTGFGVLGAMALVLNCGAAGAFVLHMASSCPLLANGSLGGYEFTVAFNKNPLLCYDPDVQRFIACDWGLLHEFAIFLAATINDYTTLVQRAEARRQACTELATQFWTHTALRKTPPQVRIVPVPISNNPDTVQLICHVWGFYPPSVTIQWLHNGLVVASGDTKLLPSGDWTYRTQMSLRASTAAGSTYTCSVWHPSLEQPMQEDWSPNLSLRTMAMVAVAAMALTLGLVVLSAGIFSFCQRPRGPGAGPSPQHDAGSDSNPGTQNDPGPSSGPHPGPGPHPGSGPHPSYGPHPGSGPHPGSGPHPSSDPHPSSDPHPGSGPHPSPGPHPGSGPHPSPGPHSGLGPDSAPDSYA
SIO_010081: LOC107321545
subclass of: SO_0000673
so part of: LOC107321545
location: complement(join(136259..136590,136690..136803,136876..137151,138091..138372,139208..139371,139466..139476))
location: region:136259-139476:-1
so has part: feature:139466-139476:-1:exon
so has part: feature:139208-139371:-1:exon
so has part: feature:138091-138372:-1:exon
so has part: feature:136876-137151:-1:exon
so has part: feature:136690-136803:-1:exon
so has part: feature:136259-136590:-1:exon

XP_015734043.1
type: Protein
SIO_000068: ncbiprotein

position:136259:-1
position: 136259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139476:-1
position: 139476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139466-139476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139208-139371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138091-138372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136876-137151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136690-136803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136259-136590:-1:exon

LOC107321545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain isoform X2
translation: MASSCPLLANGSLGGYEFTVAFNKNPLLCYDPDVQRFIACDWGLLHEFAIFLAATINDYTTLVQRAEARRQACTELATQFWTHTALRKTPPQVRIVPVPISNNPDTVQLICHVWGFYPPSVTIQWLHNGLVVASGDTKLLPSGDWTYRTQMSLRASTAAGSTYTCSVWHPSLEQPMQEDWSPNLSLRTMAMVAVAAMALTLGLVVLSAGIFSFCQRPRGPGAGPSPQHDAGSDSNPGTQNDPGPSSGPHPGPGPHPGSGPHPSYGPHPGSGPHPGSGPHPSSDPHPSSDPHPGSGPHPSPGPHPGSGPHPSPGPHSGLGPDSAPDSYA
SIO_010081: LOC107321545
subclass of: SO_0000673
so part of: LOC107321545
location: complement(join(136259..136590,136690..136803,136876..137151,138091..138355))
location: region:136259-138355:-1
so has part: feature:138091-138355:-1:exon
so has part: feature:136876-137151:-1:exon
so has part: feature:136690-136803:-1:exon
so has part: feature:136259-136590:-1:exon

XP_015734044.1
type: Protein
SIO_000068: ncbiprotein

position:138355:-1
position: 138355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138091-138355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136876-137151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136690-136803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136259-136590:-1:exon

LOC107321548
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139443..145173)
location: region:139443-145173:-1
so has part: feature:139443-145173:-1:exon
subclass of: SO_0000010

107321548
type: Gene
SIO_000068: ncbigene

position:139443:-1
position: 139443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145173:-1
position: 145173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139443-145173:-1:exon

LOC107321548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321548
product: class II histocompatibility antigen, M alpha chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015878562.1
SIO_010081: LOC107321548
subclass of: SO_0000673
so part of: LOC107321548
location: complement(join(139443..139684,139785..140066,142532..142792,144999..145173))
location: region:139443-145173:-1
so has part: feature:144999-145173:-1:exon
so has part: feature:142532-142792:-1:exon
so has part: feature:139785-140066:-1:exon
so has part: feature:139443-139684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144999-145173:-1:exon

position:144999:-1
position: 144999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142532-142792:-1:exon

position:142532:-1
position: 142532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142792:-1
position: 142792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139785-140066:-1:exon

position:139785:-1
position: 139785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140066:-1
position: 140066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139443-139684:-1:exon

position:139684:-1
position: 139684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321548
product: class II histocompatibility antigen, M alpha chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_015878563.2
SIO_010081: LOC107321548
subclass of: SO_0000673
so part of: LOC107321548
location: complement(join(139443..139684,139785..140066,142532..142792,143301..144293))
location: region:139443-144293:-1
so has part: feature:143301-144293:-1:exon
so has part: feature:142532-142792:-1:exon
so has part: feature:139785-140066:-1:exon
so has part: feature:139443-139684:-1:exon

position:144293:-1
position: 144293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143301-144293:-1:exon

position:143301:-1
position: 143301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142532-142792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139785-140066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139443-139684:-1:exon

LOC107321548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, M alpha chain isoform X1
translation: MRSTGRIWGYMGGGVAGELLWGCIALRGCSRADGRRWESVGSPGIARVHLHCKEPSLHTLSEVLFCQPDTPTRGLSVAFDSEQLFSFDFPKSQWLPQLPDAPSWPAGIEQPDELNFDTSLCLDLLHVLNQIASGQMPEAAGIPVADIFLQQPLQLGYPNTLVCMVGNVFPPAITISWQRDGIPITEGITHLTYTPVDDLGFMLFSYLEVTPRSGDIYSCIVTRERDNTSVVAYWVPQNPIPSDVLAMAVCGAVTALGILLALLGLGLLLSARRRSNWGK
SIO_010081: LOC107321548
subclass of: SO_0000673
so part of: LOC107321548
location: complement(join(139548..139684,139785..140066,142532..142792,144999..145158))
location: region:139548-145158:-1
so has part: feature:144999-145158:-1:exon
so has part: feature:142532-142792:-1:exon
so has part: feature:139785-140066:-1:exon
so has part: feature:139548-139684:-1:exon

XP_015734048.1
type: Protein
SIO_000068: ncbiprotein

position:139548:-1
position: 139548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145158:-1
position: 145158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144999-145158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142532-142792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139785-140066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139548-139684:-1:exon

LOC107321548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, M alpha chain isoform X2
translation: MGAASGRGALVAALLGAALGSVRAEPSLHTLSEVLFCQPDTPTRGLSVAFDSEQLFSFDFPKSQWLPQLPDAPSWPAGIEQPDELNFDTSLCLDLLHVLNQIASGQMPEAAGIPVADIFLQQPLQLGYPNTLVCMVGNVFPPAITISWQRDGIPITEGITHLTYTPVDDLGFMLFSYLEVTPRSGDIYSCIVTRERDNTSVVAYWVPQNPIPSDVLAMAVCGAVTALGILLALLGLGLLLSARRRSNWGK
SIO_010081: LOC107321548
subclass of: SO_0000673
so part of: LOC107321548
location: complement(join(139548..139684,139785..140066,142532..142792,143301..143373))
location: region:139548-143373:-1
so has part: feature:143301-143373:-1:exon
so has part: feature:142532-142792:-1:exon
so has part: feature:139785-140066:-1:exon
so has part: feature:139548-139684:-1:exon

XP_015734049.1
type: Protein
SIO_000068: ncbiprotein

position:143373:-1
position: 143373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143301-143373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142532-142792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139785-140066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139548-139684:-1:exon

BRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 145285..154815
location: region:145285-154815:1
so has part: feature:145285-154815:1:exon
subclass of: SO_0000010

107321536
type: Gene
SIO_000068: ncbigene

position:145285:1
position: 145285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154815:1
position: 154815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145285-154815:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BRD2
product: bromodomain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_015878533.2
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(145285..145416,149524..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..154815)
location: region:145285-154815:1
so has part: feature:145285-145416:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-154815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145285-145416:1:exon

position:145416:1
position: 145416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

position:149524:1
position: 149524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149824:1
position: 149824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150688-150825:1:exon

position:150688:1
position: 150688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150825:1
position: 150825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150902-151043:1:exon

position:150902:1
position: 150902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151043:1
position: 151043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151128-151336:1:exon

position:151128:1
position: 151128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151336:1
position: 151336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151437-151808:1:exon

position:151437:1
position: 151437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151808:1
position: 151808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151891-152019:1:exon

position:151891:1
position: 151891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152019:1
position: 152019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:152093-152347:1:exon

position:152093:1
position: 152093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152347:1
position: 152347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152429-152634:1:exon

position:152429:1
position: 152429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152634:1
position: 152634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152727-153037:1:exon

position:152727:1
position: 152727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153037:1
position: 153037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:153124-153246:1:exon

position:153124:1
position: 153124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153246:1
position: 153246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:153847-154815:1:exon

position:153847:1
position: 153847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BRD2
product: bromodomain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_015878534.2
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(145289..145416,149524..149824,150215..150311,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..154815)
location: region:145289-154815:1
so has part: feature:145289-145416:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150215-150311:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-154815:1:exon

position:145289:1
position: 145289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145289-145416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150215-150311:1:exon

position:150215:1
position: 150215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150311:1
position: 150311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153847-154815:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BRD2
product: bromodomain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_015878531.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(147760..147867,149524..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..154815)
location: region:147760-154815:1
so has part: feature:147760-147867:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-154815:1:exon

position:147760:1
position: 147760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147760-147867:1:exon

position:147867:1
position: 147867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153847-154815:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BRD2
product: bromodomain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_015878532.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(147760..147867,149524..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152468..152634,152727..153037,153124..153246,153847..154815)
location: region:147760-154815:1
so has part: feature:147760-147867:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152468-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-154815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147760-147867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152468-152634:1:exon

position:152468:1
position: 152468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153847-154815:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVNPQSKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGGDDESRARQAQLRKAKKGGGGGSGGGSSKNSKKAAKTALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(147839..147867,149524..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..153977)
location: region:147839-153977:1
so has part: feature:147839-147867:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-153977:1:exon

XP_015734017.1
type: Protein
SIO_000068: ncbiprotein

position:147839:1
position: 147839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153977:1
position: 153977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147839-147867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153847-153977:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X2
translation: MLQNVNPQSKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQGPVSKPKKKREKKKKKKSEKHKGRGGGGDDESRARQAQLRKAKKGGGGGSGGGSSKNSKKAAKTALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(147839..147867,149524..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152468..152634,152727..153037,153124..153246,153847..153977)
location: region:147839-153977:1
so has part: feature:147839-147867:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152468-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-153977:1:exon

XP_015734018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147839-147867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152468-152634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153847-153977:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: BRD2
product: bromodomain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_015878535.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(147856..147867,149524..149824,150215..150311,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..154815)
location: region:147856-154815:1
so has part: feature:147856-147867:1:exon
so has part: feature:149524-149824:1:exon
so has part: feature:150215-150311:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-154815:1:exon

position:147856:1
position: 147856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147856-147867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149524-149824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150215-150311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153847-154815:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X3
translation: MGLATESTPGKRIRKPSLLYEGFESPTMASVPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGGDDESRARQAQLRKAKKGGGGGSGGGSSKNSKKAAKTALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(149552..149824,150688..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..153977)
location: region:149552-153977:1
so has part: feature:149552-149824:1:exon
so has part: feature:150688-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-153977:1:exon

XP_015734019.1
type: Protein
SIO_000068: ncbiprotein

position:149552:1
position: 149552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149552-149824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150688-150825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153847-153977:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X4
translation: MDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGGDDESRARQAQLRKAKKGGGGGSGGGSSKNSKKAAKTALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(150715..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..153977)
location: region:150715-153977:1
so has part: feature:150715-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-153977:1:exon

XP_015734020.1
type: Protein
SIO_000068: ncbiprotein

position:150715:1
position: 150715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150715-150825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153847-153977:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X4
translation: MDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGGDDESRARQAQLRKAKKGGGGGSGGGSSKNSKKAAKTALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(150715..150825,150902..151043,151128..151336,151437..151808,151891..152019,152093..152347,152429..152634,152727..153037,153124..153246,153847..153977)
location: region:150715-153977:1
so has part: feature:150715-150825:1:exon
so has part: feature:150902-151043:1:exon
so has part: feature:151128-151336:1:exon
so has part: feature:151437-151808:1:exon
so has part: feature:151891-152019:1:exon
so has part: feature:152093-152347:1:exon
so has part: feature:152429-152634:1:exon
so has part: feature:152727-153037:1:exon
so has part: feature:153124-153246:1:exon
so has part: feature:153847-153977:1:exon

XP_015734021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150715-150825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150902-151043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151128-151336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151437-151808:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151891-152019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152093-152347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152429-152634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152727-153037:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153124-153246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153847-153977:1:exon

LOC107321546
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
alternative label: CojaII-01
gene: LOC107321546
gene synonym: CojaII-01
note: class II histocompatibility antigen, B-L beta chain-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(157238..158668)
location: region:157238-158668:-1
so has part: feature:157238-158668:-1:exon
subclass of: SO_0000010

107321546
type: Gene
SIO_000068: ncbigene

position:157238:-1
position: 157238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158668:-1
position: 158668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157238-158668:-1:exon

LOC107321546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
alternative label: CojaII-01
gene: LOC107321546
gene synonym: CojaII-01
product: class II histocompatibility antigen, B-L beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 mRNAs, 4 ESTs, 290 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_015878560.2
SIO_010081: LOC107321546
subclass of: SO_0000673
so part of: LOC107321546
location: complement(join(157238..157374,157448..157471,157548..157658,157754..158035,158122..158391,158536..158668))
location: region:157238-158668:-1
so has part: feature:158536-158668:-1:exon
so has part: feature:158122-158391:-1:exon
so has part: feature:157754-158035:-1:exon
so has part: feature:157548-157658:-1:exon
so has part: feature:157448-157471:-1:exon
so has part: feature:157238-157374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158536-158668:-1:exon

position:158536:-1
position: 158536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158122-158391:-1:exon

position:158122:-1
position: 158122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158391:-1
position: 158391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157754-158035:-1:exon

position:157754:-1
position: 157754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158035:-1
position: 158035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157548-157658:-1:exon

position:157548:-1
position: 157548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157658:-1
position: 157658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157448-157471:-1:exon

position:157448:-1
position: 157448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157471:-1
position: 157471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157238-157374:-1:exon

position:157374:-1
position: 157374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
alternative label: CojaII-01
gene: LOC107321546
gene synonym: CojaII-01
product: class II histocompatibility antigen, B-L beta chain-like
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001323214.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001323214.1
SIO_010081: LOC107321546
subclass of: SO_0000673
so part of: LOC107321546
location: complement(join(157361..157374,157448..157471,157509..157658,157754..158035,158122..158391,158536..158626))
location: region:157361-158626:-1
so has part: feature:158536-158626:-1:exon
so has part: feature:158122-158391:-1:exon
so has part: feature:157754-158035:-1:exon
so has part: feature:157509-157658:-1:exon
so has part: feature:157448-157471:-1:exon
so has part: feature:157361-157374:-1:exon

position:157361:-1
position: 157361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158626:-1
position: 158626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158536-158626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158122-158391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157754-158035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157509-157658:-1:exon

position:157509:-1
position: 157509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157448-157471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157361-157374:-1:exon

LOC107321546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
alternative label: CojaII-01
gene: LOC107321546
gene synonym: CojaII-01
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like isoform X1
translation: MGSGRVPAAVAVLVALLALGARSAYGTRPSAYFQHSFISECHFLNGTQRVRLVDRYIYNRQQYVHFDSDVGKFVADTALGERQAEYWNSQTEILEDARGAVDTYCRYNYGVDEPFTVQRSVQPKVRVSALQSGSLGESDRLACYVTGFYPPEIEVKWFQNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYECRVEHASLPQGISQPWEPPSDAGRSKMLTGVGGFVLGLVFLALGLFMFLRSQKGQPVATTPGMLN
SIO_010081: LOC107321546
subclass of: SO_0000673
so part of: LOC107321546
location: complement(join(157361..157374,157448..157471,157548..157658,157754..158035,158122..158391,158536..158626))
location: region:157361-158626:-1
so has part: feature:158536-158626:-1:exon
so has part: feature:158122-158391:-1:exon
so has part: feature:157754-158035:-1:exon
so has part: feature:157548-157658:-1:exon
so has part: feature:157448-157471:-1:exon
so has part: feature:157361-157374:-1:exon

XP_015734046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158536-158626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158122-158391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157754-158035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157548-157658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157448-157471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157361-157374:-1:exon

LOC107321546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
alternative label: CojaII-01
gene: LOC107321546
gene synonym: CojaII-01
inference: similar to AA sequence (same species):RefSeq:NP_001310143.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like precursor
translation: MGSGRVPAAVAVLVALLALGARSAYGTRPSAYFQHSFISECHFLNGTQRVRLVDRYIYNRQQYTHFDSDVGKYVADTPLGERQAEYWNSQTEILEDARDAVDTYCRYNYGVDEPFTVQRSVQPKVRVSALQSGSLGESDRLACYVTGFYPPEIEVKWFQNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYECRVEHASLPQGISQPWEPPSDAGRSKMLTGVGGFVLGLVFLALGLFMFLRSQKGERWGAGLRMGEGGQPVATTPGMLN
SIO_010081: LOC107321546
subclass of: SO_0000673
so part of: LOC107321546
location: complement(join(157361..157374,157448..157471,157509..157658,157754..158035,158122..158391,158536..158626))
location: region:157361-158626:-1
so has part: feature:158536-158626:-1:exon
so has part: feature:158122-158391:-1:exon
so has part: feature:157754-158035:-1:exon
so has part: feature:157509-157658:-1:exon
so has part: feature:157448-157471:-1:exon
so has part: feature:157361-157374:-1:exon

NP_001310143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158536-158626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158122-158391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157754-158035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157509-157658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157448-157471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157361-157374:-1:exon

LOC116654148
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 160664..162093
location: region:160664-162093:1
so has part: feature:160664-162093:1:exon
subclass of: SO_0000011

116654148
type: Gene
SIO_000068: ncbigene

position:160664:1
position: 160664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162093:1
position: 162093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160664-162093:1:exon

LOC116654148
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654148
product: uncharacterized LOC116654148
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004309089.1
SIO_010081: LOC116654148
subclass of: SO_0000673
so part of: LOC116654148
location: join(160664..160994,161270..162093)
location: region:160664-162093:1
so has part: feature:160664-160994:1:exon
so has part: feature:161270-162093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160664-160994:1:exon

position:160994:1
position: 160994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161270-162093:1:exon

position:161270:1
position: 161270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321556
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(161880..162279)
location: region:161880-162279:-1
so has part: feature:161880-162279:-1:exon
subclass of: SO_0000011

107321556
type: Gene
SIO_000068: ncbigene

position:161880:-1
position: 161880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162279:-1
position: 162279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161880-162279:-1:exon

LOC107321556
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107321556
product: uncharacterized LOC107321556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XR_001558593.2
SIO_010081: LOC107321556
subclass of: SO_0000673
so part of: LOC107321556
location: complement(join(161880..162171,162245..162279))
location: region:161880-162279:-1
so has part: feature:162245-162279:-1:exon
so has part: feature:161880-162171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162245-162279:-1:exon

position:162245:-1
position: 162245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161880-162171:-1:exon

position:162171:-1
position: 162171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAPBP
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TAPBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164427..169753
location: region:164427-169753:1
so has part: feature:164427-169753:1:exon
subclass of: SO_0000010

107321544
type: Gene
SIO_000068: ncbigene

position:164427:1
position: 164427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169753:1
position: 169753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164427-169753:1:exon

TAPBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TAPBP
product: TAP binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 37 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_015878556.2
SIO_010081: TAPBP
subclass of: SO_0000673
so part of: TAPBP
location: join(164427..164532,164624..164833,165262..165501,166528..166872,167650..167988,169273..169362,169524..169549,169672..169753)
location: region:164427-169753:1
so has part: feature:164427-164532:1:exon
so has part: feature:164624-164833:1:exon
so has part: feature:165262-165501:1:exon
so has part: feature:166528-166872:1:exon
so has part: feature:167650-167988:1:exon
so has part: feature:169273-169362:1:exon
so has part: feature:169524-169549:1:exon
so has part: feature:169672-169753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164427-164532:1:exon

position:164532:1
position: 164532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164624-164833:1:exon

position:164624:1
position: 164624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164833:1
position: 164833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165262-165501:1:exon

position:165262:1
position: 165262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165501:1
position: 165501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166528-166872:1:exon

position:166528:1
position: 166528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166872:1
position: 166872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167650-167988:1:exon

position:167650:1
position: 167650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167988:1
position: 167988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:169273-169362:1:exon

position:169273:1
position: 169273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169362:1
position: 169362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169524-169549:1:exon

position:169524:1
position: 169524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169549:1
position: 169549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169672-169753:1:exon

position:169672:1
position: 169672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAPBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TAPBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tapasin
translation: MAAGLRLLLAGLCWSQFRVKDAASSPPPPAPIRCALLDGVGRGGALPGGGNTRPALLRFGGDAETPPEPGPEPEVTFNISDPWGALTPLGVPPRTPPSCELNPTNPQTGSAPWSRPLHPDARSPPTAGGQWWVAAVGTPQYGATALLQGGTNTEGTITAAVSLAVLTHTPTLHGHAGSPIHLHCAFAAPPSPFVLEWRHQSRGAGQVLLAYDSTSARAPRATPGAELLLGTRDGDGVTAVTLRLARPSPGDEGTYICSVFLPHGHAQTVLQLSVFAPPKVILSPKNLVVTPGMSAELRCHVSGFYPLDVTVTWQRRAEKSRPSRSTGGSVMDSWTSSHRRAADGTYSRTAAARLVPAHPQHHGDVYSCVVTHGALDKPIRVSVRLLLAGTEGPHLEDITGLFLVAFILCGLIRWLYPKAARPEEETKKSQ
SIO_010081: TAPBP
subclass of: SO_0000673
so part of: TAPBP
location: join(164502..164532,164624..164833,165262..165501,166528..166872,167650..167988,169273..169362,169524..169549,169672..169683)
location: region:164502-169683:1
so has part: feature:164502-164532:1:exon
so has part: feature:164624-164833:1:exon
so has part: feature:165262-165501:1:exon
so has part: feature:166528-166872:1:exon
so has part: feature:167650-167988:1:exon
so has part: feature:169273-169362:1:exon
so has part: feature:169524-169549:1:exon
so has part: feature:169672-169683:1:exon

XP_015734042.1
type: Protein
SIO_000068: ncbiprotein

position:164502:1
position: 164502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169683:1
position: 169683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164502-164532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164624-164833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165262-165501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166528-166872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167650-167988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169273-169362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169524-169549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169672-169683:1:exon

LOC107321554
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 170179..177772
location: region:170179-177772:1
so has part: feature:170179-177772:1:exon
subclass of: SO_0000010

107321554
type: Gene
SIO_000068: ncbigene

position:170179:1
position: 170179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177772:1
position: 177772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170179-177772:1:exon

LOC107321554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321554
product: class II histocompatibility antigen, B-L beta chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 58 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448004.1
SIO_010081: LOC107321554
subclass of: SO_0000673
so part of: LOC107321554
location: join(170179..170319,170408..170676,170763..171044,171140..171170,171436..173587,174788..177325,177424..177772)
location: region:170179-177772:1
so has part: feature:170179-170319:1:exon
so has part: feature:170408-170676:1:exon
so has part: feature:170763-171044:1:exon
so has part: feature:171140-171170:1:exon
so has part: feature:171436-173587:1:exon
so has part: feature:174788-177325:1:exon
so has part: feature:177424-177772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170179-170319:1:exon

position:170319:1
position: 170319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170408-170676:1:exon

position:170408:1
position: 170408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170676:1
position: 170676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170763-171044:1:exon

position:170763:1
position: 170763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171044:1
position: 171044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171140-171170:1:exon

position:171140:1
position: 171140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171170:1
position: 171170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171436-173587:1:exon

position:171436:1
position: 171436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173587:1
position: 173587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174788-177325:1:exon

position:174788:1
position: 174788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177325:1
position: 177325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:177424-177772:1:exon

position:177424:1
position: 177424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321554
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRVPAAVAVLVALLALGARSAYGTRPSAFFQWRVQXECHFLNGTQRVRYVDRHIYNRQQLMHFDSDVGKYVADSPLGELQAEHFNSDTEYLEYKRGQVDRYCRLNYGALEPVTAQRSVQPKVRVSALQSGSLGESDRLACYVTGFYPPEIEVKWFQNGREETERVVSTDVMQNGDWTYQVLVVLETVPRRGDSYECRVEHASLPQGISQPWEPPSDAGRSKMDAELAAAPPSRSTDTPRTPGRGSPSCCPPTLPPCRRNARSVPSPRRSRSDAVPLSAHPWGPSVVRRQGKEVGGLCSSIPFSPRRWFGSFHLICSFIASNGQKELVCCTRRSGGEHRRSVSHEQTALLCSAQPHRRHCGTWAGGAHCPPVASESS
SIO_010081: LOC107321554
subclass of: SO_0000673
so part of: LOC107321554
location: join(170229..170319,170408..170676,170763..171044,171140..171170,171436..171901)
location: region:170229-171901:1
so has part: feature:170229-170319:1:exon
so has part: feature:170408-170676:1:exon
so has part: feature:170763-171044:1:exon
so has part: feature:171140-171170:1:exon
so has part: feature:171436-171901:1:exon

XP_032303895.1
type: Protein
SIO_000068: ncbiprotein

position:170229:1
position: 170229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171901:1
position: 171901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170229-170319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170408-170676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170763-171044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171140-171170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171436-171901:1:exon

LOC107321555
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171812..173813)
location: region:171812-173813:-1
so has part: feature:171812-173813:-1:exon
subclass of: SO_0000010

107321555
type: Gene
SIO_000068: ncbigene

position:171812:-1
position: 171812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173813:-1
position: 173813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171812-173813:-1:exon

LOC107321555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321555
product: C-type lectin domain family 2 member D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015878573.2
SIO_010081: LOC107321555
subclass of: SO_0000673
so part of: LOC107321555
location: complement(join(171812..172105,172378..172484,172799..172971,173458..173544,173756..173813))
location: region:171812-173813:-1
so has part: feature:173756-173813:-1:exon
so has part: feature:173458-173544:-1:exon
so has part: feature:172799-172971:-1:exon
so has part: feature:172378-172484:-1:exon
so has part: feature:171812-172105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173756-173813:-1:exon

position:173756:-1
position: 173756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173458-173544:-1:exon

position:173458:-1
position: 173458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173544:-1
position: 173544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172799-172971:-1:exon

position:172799:-1
position: 172799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172971:-1
position: 172971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172378-172484:-1:exon

position:172378:-1
position: 172378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172484:-1
position: 172484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171812-172105:-1:exon

position:172105:-1
position: 172105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321555
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(173808..173810),aa:OTHER)
product: LOW QUALITY PROTEIN: C-type lectin domain family 2 member D-like
translation: MXEMREYPNFGGTEQSRREGPSHRPCVTIQLTLAALFTVLLITAVAFAVQAFQPHPQPCAQCPFDWIGFRGKCYRFSEDESNWTSSHNNCSALGASLAVLDSAEDLSFAMRHIGSSPHWVGLTREGQEHPWQWLNRSPSSHPFQVQGDGPCAYLGEAGLSSSHCSQRRNWV
SIO_010081: LOC107321555
subclass of: SO_0000673
so part of: LOC107321555
location: complement(join(172015..172105,172378..172484,172799..172971,173458..173544,173756..173813))
location: region:172015-173813:-1
so has part: feature:173756-173813:-1:exon
so has part: feature:173458-173544:-1:exon
so has part: feature:172799-172971:-1:exon
so has part: feature:172378-172484:-1:exon
so has part: feature:172015-172105:-1:exon

XP_015734059.2
type: Protein
SIO_000068: ncbiprotein

position:172015:-1
position: 172015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173756-173813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173458-173544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172799-172971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172378-172484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172015-172105:-1:exon

LOC107321550
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178643..182105
location: region:178643-182105:1
so has part: feature:178643-182105:1:exon
subclass of: SO_0000010

107321550
type: Gene
SIO_000068: ncbigene

position:178643:1
position: 178643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182105:1
position: 182105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178643-182105:1:exon

LOC107321550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321550
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032447985.1
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(178643..178945,179675..180366,180719..181060,181425..181936)
location: region:178643-181936:1
so has part: feature:178643-178945:1:exon
so has part: feature:179675-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181936:1:exon

position:181936:1
position: 181936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178643-178945:1:exon

position:178945:1
position: 178945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179675-180366:1:exon

position:179675:1
position: 179675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180366:1
position: 180366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180719-181060:1:exon

position:180719:1
position: 180719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181060:1
position: 181060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181425-181936:1:exon

position:181425:1
position: 181425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321550
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032447986.1
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(178643..178945,179960..180366,180719..181060,181425..181936)
location: region:178643-181936:1
so has part: feature:178643-178945:1:exon
so has part: feature:179960-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178643-178945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179960-180366:1:exon

position:179960:1
position: 179960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180719-181060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181425-181936:1:exon

LOC107321550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321550
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_015878565.2
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(178647..180366,180719..181060,181425..181529,181842..182105)
location: region:178647-182105:1
so has part: feature:178647-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181529:1:exon
so has part: feature:181842-182105:1:exon

position:178647:1
position: 178647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178647-180366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180719-181060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181425-181529:1:exon

position:181529:1
position: 181529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181842-182105:1:exon

position:181842:1
position: 181842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X2
translation: MGFTSGCNHPSFSHPWKTRLAHLLALHLLHLGSAQFRVVAPNHRVSAIVGQDVVLRCLLSPCKDAWSSDIRWVQHRSAGLVHHYQNGLDLEQMDEYKGRTELLRDGLSDGNLDLLITAVTSADSGSYICTVQDFDGYAYAVVKLEVSDPFCENEGPWKVALAVVIILLVGSALFNIFLYRKQAAQSREHRAESESSQPLPPLSNNL
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(180267..180366,180719..181060,181425..181529,181842..181915)
location: region:180267-181915:1
so has part: feature:180267-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181529:1:exon
so has part: feature:181842-181915:1:exon

XP_015734051.1
type: Protein
SIO_000068: ncbiprotein

position:180267:1
position: 180267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181915:1
position: 181915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180267-180366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180719-181060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181425-181529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181842-181915:1:exon

LOC107321550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MGFTSGCNHPSFSHPWKTRLAHLLALHLLHLGSAQFRVVAPNHRVSAIVGQDVVLRCLLSPCKDAWSSDIRWVQHRSAGLVHHYQNGLDLEQMDEYKGRTELLRDGLSDGNLDLLITAVTSADSGSYICTVQDFDGYAYAVVKLEVSDPFCENEGPWKVALAVVIILLVGSALFNIFLYRKQGELRAEGTEHREVFCSDRGGWGGAELCSMELHRRRKGDFS
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(180267..180366,180719..181060,181425..181651)
location: region:180267-181651:1
so has part: feature:180267-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181651:1:exon

XP_032303876.1
type: Protein
SIO_000068: ncbiprotein

position:181651:1
position: 181651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180267-180366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180719-181060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181425-181651:1:exon

LOC107321550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MGFTSGCNHPSFSHPWKTRLAHLLALHLLHLGSAQFRVVAPNHRVSAIVGQDVVLRCLLSPCKDAWSSDIRWVQHRSAGLVHHYQNGLDLEQMDEYKGRTELLRDGLSDGNLDLLITAVTSADSGSYICTVQDFDGYAYAVVKLEVSDPFCENEGPWKVALAVVIILLVGSALFNIFLYRKQGELRAEGTEHREVFCSDRGGWGGAELCSMELHRRRKGDFS
SIO_010081: LOC107321550
subclass of: SO_0000673
so part of: LOC107321550
location: join(180267..180366,180719..181060,181425..181651)
location: region:180267-181651:1
so has part: feature:180267-180366:1:exon
so has part: feature:180719-181060:1:exon
so has part: feature:181425-181651:1:exon

XP_032303877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180267-180366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180719-181060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181425-181651:1:exon

LOC116654151
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182971..186884
location: region:182971-186884:1
so has part: feature:182971-186884:1:exon
subclass of: SO_0000010

116654151
type: Gene
SIO_000068: ncbigene

position:182971:1
position: 182971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186884:1
position: 186884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182971-186884:1:exon

LOC116654151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654151
product: killer cell lectin-like receptor subfamily B member 1B allele B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448007.1
SIO_010081: LOC116654151
subclass of: SO_0000673
so part of: LOC116654151
location: join(182971..183056,185648..185813,186331..186440,186514..186884)
location: region:182971-186884:1
so has part: feature:182971-183056:1:exon
so has part: feature:185648-185813:1:exon
so has part: feature:186331-186440:1:exon
so has part: feature:186514-186884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182971-183056:1:exon

position:183056:1
position: 183056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185648-185813:1:exon

position:185648:1
position: 185648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185813:1
position: 185813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186331-186440:1:exon

position:186331:1
position: 186331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186440:1
position: 186440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186514-186884:1:exon

position:186514:1
position: 186514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654151
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:185685..185687,aa:OTHER)
product: LOW QUALITY PROTEIN: killer cell lectin-like receptor subfamily B member 1B allele B
translation: MVLAAACGNARVLFGPLLDFGLRFGTEQKLSLGFCCCLLCPXFWRLLEDRCYGLSIEKGIWTRAQKECEYQQSQLVVIRNVAKKDELKAMAGVGNHPVWIGLQVSRNEWQWVDKSSFNSTDFGHLPVVENHCGTFKNSQVEEDDCNGEHKWVCQKEPLRLQP
SIO_010081: LOC116654151
subclass of: SO_0000673
so part of: LOC116654151
location: join(182971..183056,185648..185813,186331..186440,186514..186640)
location: region:182971-186640:1
so has part: feature:182971-183056:1:exon
so has part: feature:185648-185813:1:exon
so has part: feature:186331-186440:1:exon
so has part: feature:186514-186640:1:exon

XP_032303898.1
type: Protein
SIO_000068: ncbiprotein

position:186640:1
position: 186640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182971-183056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185648-185813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186331-186440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186514-186640:1:exon

LOC107321551
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188819..192139
location: region:188819-192139:1
so has part: feature:188819-192139:1:exon
subclass of: SO_0000010

107321551
type: Gene
SIO_000068: ncbigene

position:188819:1
position: 188819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192139:1
position: 192139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188819-192139:1:exon

LOC107321551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321551
product: myelin-oligodendrocyte glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015878569.2
SIO_010081: LOC107321551
subclass of: SO_0000673
so part of: LOC107321551
location: join(188819..190283,190638..190979,191345..191449,191761..192139)
location: region:188819-192139:1
so has part: feature:188819-190283:1:exon
so has part: feature:190638-190979:1:exon
so has part: feature:191345-191449:1:exon
so has part: feature:191761-192139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188819-190283:1:exon

position:190283:1
position: 190283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190638-190979:1:exon

position:190638:1
position: 190638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190979:1
position: 190979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191345-191449:1:exon

position:191345:1
position: 191345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191449:1
position: 191449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191761-192139:1:exon

position:191761:1
position: 191761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like
translation: MSWNRNRILLLLAPSSHPSSTPSPPPSPYQSPSFLTFPQLLPPSSTPAQMCFISGCNHPSFSHPRRTLLAHLMALHLLQLGSAQLTVVAPNPHVTAIVGQDVVLRCHLSPCKDAWSSDIRWIQHGSAELLHHYQNGEDLEQMEEYKGRIELLRDGLSDGNLDLRITAVTSADSGTYSCVVQDGDHFAEGVMNLEVSDPFCENEGTWQVALVVVITLLFGSGFFNVFLYRMQAAQSREHRAESESSQPLPPPSNNL
SIO_010081: LOC107321551
subclass of: SO_0000673
so part of: LOC107321551
location: join(190037..190283,190638..190979,191345..191449,191761..191834)
location: region:190037-191834:1
so has part: feature:190037-190283:1:exon
so has part: feature:190638-190979:1:exon
so has part: feature:191345-191449:1:exon
so has part: feature:191761-191834:1:exon

XP_015734055.2
type: Protein
SIO_000068: ncbiprotein

position:190037:1
position: 190037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191834:1
position: 191834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190037-190283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190638-190979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191345-191449:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191761-191834:1:exon

LOC107321532
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195558..198460
location: region:195558-198460:1
so has part: feature:195558-198460:1:exon
subclass of: SO_0000010

107321532
type: Gene
SIO_000068: ncbigene

position:195558:1
position: 195558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198460:1
position: 198460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195558-198460:1:exon

LOC107321532
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321532
product: uncharacterized LOC107321532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448008.1
SIO_010081: LOC107321532
subclass of: SO_0000673
so part of: LOC107321532
location: join(195558..195597,195950..196291,196652..196798,197110..197189,197736..197840,198243..198353,198419..198460)
location: region:195558-198460:1
so has part: feature:195558-195597:1:exon
so has part: feature:195950-196291:1:exon
so has part: feature:196652-196798:1:exon
so has part: feature:197110-197189:1:exon
so has part: feature:197736-197840:1:exon
so has part: feature:198243-198353:1:exon
so has part: feature:198419-198460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195558-195597:1:exon

position:195597:1
position: 195597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195950-196291:1:exon

position:195950:1
position: 195950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196291:1
position: 196291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196652-196798:1:exon

position:196652:1
position: 196652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196798:1
position: 196798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197110-197189:1:exon

position:197110:1
position: 197110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197189:1
position: 197189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197736-197840:1:exon

position:197736:1
position: 197736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197840:1
position: 197840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198243-198353:1:exon

position:198243:1
position: 198243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198353:1
position: 198353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198419-198460:1:exon

position:198419:1
position: 198419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321532
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321532
translation: MEEYKGRTELLRDGLSDGNLGLLITAVSSVDRGSYICAVEDSDGYADAVVELEVSDPFSQIVHPWKVALAVVVTLLVGSIVIIAFLLRKNRRQRSFIVYLLIKKAAQSREHRAESESSQPLNYHSNNLEYCAEIVWRDPDPDENHSIVDWLMAACRMVWPNKTDMPADVQFAKIDRQPNHVLLRLWKQLKDEEKFQNYPRKLREKEAASSVSGHDP
SIO_010081: LOC107321532
subclass of: SO_0000673
so part of: LOC107321532
location: join(196126..196291,196652..196798,197110..197189,197736..197840,198243..198353,198419..198460)
location: region:196126-198460:1
so has part: feature:196126-196291:1:exon
so has part: feature:196652-196798:1:exon
so has part: feature:197110-197189:1:exon
so has part: feature:197736-197840:1:exon
so has part: feature:198243-198353:1:exon
so has part: feature:198419-198460:1:exon

XP_032303899.1
type: Protein
SIO_000068: ncbiprotein

position:196126:1
position: 196126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196126-196291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196652-196798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197110-197189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197736-197840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198243-198353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198419-198460:1:exon

LOC107321542
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200397..205397
location: region:200397-205397:1
so has part: feature:200397-205397:1:exon
subclass of: SO_0000010

107321542
type: Gene
SIO_000068: ncbigene

position:200397:1
position: 200397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205397:1
position: 205397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200397-205397:1:exon

LOC107321542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321542
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015878552.2
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(200397..200620,201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205397)
location: region:200397-205397:1
so has part: feature:200397-200620:1:exon
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
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so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:200397-200620:1:exon

position:200620:1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:201054-201153:1:exon

position:201054:1
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position:201153:1
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urn:…
SIO_000300: 3
SIO_000628: feature:201512-201853:1:exon

position:201512:1
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position:201853:1
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urn:…
SIO_000300: 4
SIO_000628: feature:202155-202259:1:exon

position:202155:1
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reference: sequence
type: ForwardStrandPosition
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position:202259:1
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urn:…
SIO_000300: 5
SIO_000628: feature:202569-202589:1:exon

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position:202589:1
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urn:…
SIO_000300: 6
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position:202952:1
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urn:…
SIO_000300: 7
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position:203314:1
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:203817-203837:1:exon

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position:203837:1
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urn:…
SIO_000300: 11
SIO_000628: feature:203941-203961:1:exon

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urn:…
SIO_000300: 12
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position:204092:1
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urn:…
SIO_000300: 13
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position:204219:1
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urn:…
SIO_000300: 14
SIO_000628: feature:204318-204338:1:exon

position:204318:1
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position:204338:1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:204426-204464:1:exon

position:204426:1
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position:204464:1
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urn:…
SIO_000300: 16
SIO_000628: feature:204567-204587:1:exon

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position:204587:1
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urn:…
SIO_000300: 17
SIO_000628: feature:204695-204715:1:exon

position:204695:1
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reference: sequence
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position:204715:1
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urn:…
SIO_000300: 18
SIO_000628: feature:204818-204838:1:exon

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reference: sequence
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position:204838:1
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urn:…
SIO_000300: 19
SIO_000628: feature:204927-205397:1:exon

position:204927:1
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reference: sequence
type: ForwardStrandPosition
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LOC107321542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321542
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015878551.2
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(200572..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205397)
location: region:200572-205397:1
so has part: feature:200572-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
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so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205397:1:exon

position:200572:1
position: 200572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200572-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203425-203445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203686-203706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204927-205397:1:exon

LOC107321542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321542
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015878554.2
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(200572..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205397)
location: region:200572-205397:1
so has part: feature:200572-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200572-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204927-205397:1:exon

LOC107321542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321542
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015878553.2
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(200575..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204444..204464,204567..204587,204695..204715,204818..204838,204927..205397)
location: region:200575-205397:1
so has part: feature:200575-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
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so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205397:1:exon

position:200575:1
position: 200575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200575-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203425-203445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203686-203706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204444-204464:1:exon

position:204444:1
position: 204444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204927-205397:1:exon

LOC107321542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321542
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015878555.2
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(200576..201153,201512..201853,202155..202259,202569..202589,202932..202952,203294..203314,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205397)
location: region:200576-205397:1
so has part: feature:200576-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203294-203314:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205397:1:exon

position:200576:1
position: 200576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200576-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203294-203314:1:exon

position:203294:1
position: 203294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204927-205397:1:exon

LOC107321542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MGFTLGCRHSSFSHHWRALLAHLVALHLLHLGSAQMRVVAPNLHVTAIVGQDVVLCCQLSPCKDAWSSEIRWIQHRSAGLLHHYRNGLDLEQMEEYKGRTELLRDGLTNGNLDLRITAVSSADSGSYICAVEDGDGYADAVVELEVSDPFSQIVHPWKVALGLVVTLLVGSFLIIAFLLRKQVVQSKELKEKDAALVVIWPFSRIMRFGVWLLEQVWDQKLFPLTMHFFCFHFAERKDAMLVEQAEKLEKKDAMLVELSRMSKSSDAKLDTLAAKLVEITNKFDKWNFDPISLPFPEMQNRPTNLRAPMLKNQVAEQAERTEASEEPSRRRLRDETCHAAWTAVHFHRPQFAQDNKATISPSKRTAGPKGASVCIEGEPCSSVRQSCPREHRDEDVGPPTQIQLKVRNQRKEEYRRKAESLDKIWIRREIT
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205249)
location: region:201054-205249:1
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
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so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205249:1:exon

XP_015734037.1
type: Protein
SIO_000068: ncbiprotein

position:205249:1
position: 205249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201054-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203425-203445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203686-203706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204927-205249:1:exon

LOC107321542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MGFTLGCRHSSFSHHWRALLAHLVALHLLHLGSAQMRVVAPNLHVTAIVGQDVVLCCQLSPCKDAWSSEIRWIQHRSAGLLHHYRNGLDLEQMEEYKGRTELLRDGLTNGNLDLRITAVSSADSGSYICAVEDGDGYADAVVELEVSDPFSQIVHPWKVALGLVVTLLVGSFLIIAFLLRKQVVQSKELKEKDAALVVIWPFSRIMRFGVWLLEQVWDQKLFPLTMHFFCFHFAERKDAMLVEQAEKLEKKDAMLVELSRMSKSSDAKLDTLAAKLVEITNKFDKWNFDPISLPFPEMQNRPTNLRAPMLKNQVAEQAERTEASEEPSRRRLRDETCHAAWTAVHFHRPQFAQDNKATISPSKRTAGPKGASVCIEGEPCSSVRQSCPREHRDEDVGPPTQIQLKVRNQRKEEYRRKAESLDKIWIRREIT
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205249)
location: region:201054-205249:1
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205249:1:exon

XP_015734038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201054-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203425-203445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203686-203706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204927-205249:1:exon

LOC107321542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X2
translation: MGFTLGCRHSSFSHHWRALLAHLVALHLLHLGSAQMRVVAPNLHVTAIVGQDVVLCCQLSPCKDAWSSEIRWIQHRSAGLLHHYRNGLDLEQMEEYKGRTELLRDGLTNGNLDLRITAVSSADSGSYICAVEDGDGYADAVVELEVSDPFSQIVHPWKVALGLVVTLLVGSFLIIAFLLRKQVVQSKELKEKDAALVVIWPFSRIMRFGVWLLEQVWDQKLFPLTMHFFCFHFAERKDAMLVEQAEKLEKKDAMLVELSRMSKSSDAKLDTLAAKLVEITNKFDKWNFDPKMQNRPTNLRAPMLKNQVAEQAERTEASEEPSRRRLRDETCHAAWTAVHFHRPQFAQDNKATISPSKRTAGPKGASVCIEGEPCSSVRQSCPREHRDEDVGPPTQIQLKVRNQRKEEYRRKAESLDKIWIRREIT
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203425..203445,203686..203706,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204444..204464,204567..204587,204695..204715,204818..204838,204927..205249)
location: region:201054-205249:1
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203425-203445:1:exon
so has part: feature:203686-203706:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204444-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205249:1:exon

XP_015734039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201054-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203425-203445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203686-203706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204444-204464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204927-205249:1:exon

LOC107321542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X3
translation: MGFTLGCRHSSFSHHWRALLAHLVALHLLHLGSAQMRVVAPNLHVTAIVGQDVVLCCQLSPCKDAWSSEIRWIQHRSAGLLHHYRNGLDLEQMEEYKGRTELLRDGLTNGNLDLRITAVSSADSGSYICAVEDGDGYADAVVELEVSDPFSQIVHPWKVALGLVVTLLVGSFLIIAFLLRKQVVQSKELKEKDAALVVIWPFSRIMRFGVWLLEQVWDQKLFPLTMHFFCFHFAERKDAMLVELSRMSKSSDAKLDTLAAKLVEITNKFDKWNFDPISLPFPEMQNRPTNLRAPMLKNQVAEQAERTEASEEPSRRRLRDETCHAAWTAVHFHRPQFAQDNKATISPSKRTAGPKGASVCIEGEPCSSVRQSCPREHRDEDVGPPTQIQLKVRNQRKEEYRRKAESLDKIWIRREIT
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203180..203314,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205249)
location: region:201054-205249:1
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203180-203314:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205249:1:exon

XP_015734040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201054-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203180-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204927-205249:1:exon

LOC107321542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321542 isoform X4
translation: MGFTLGCRHSSFSHHWRALLAHLVALHLLHLGSAQMRVVAPNLHVTAIVGQDVVLCCQLSPCKDAWSSEIRWIQHRSAGLLHHYRNGLDLEQMEEYKGRTELLRDGLTNGNLDLRITAVSSADSGSYICAVEDGDGYADAVVELEVSDPFSQIVHPWKVALGLVVTLLVGSFLIIAFLLRKQVVQSKELKEKDAALERKDAMLVELSRMSKSSDAKLDTLAAKLVEITNKFDKWNFDPISLPFPEMQNRPTNLRAPMLKNQVAEQAERTEASEEPSRRRLRDETCHAAWTAVHFHRPQFAQDNKATISPSKRTAGPKGASVCIEGEPCSSVRQSCPREHRDEDVGPPTQIQLKVRNQRKEEYRRKAESLDKIWIRREIT
SIO_010081: LOC107321542
subclass of: SO_0000673
so part of: LOC107321542
location: join(201054..201153,201512..201853,202155..202259,202569..202589,202932..202952,203294..203314,203817..203837,203941..203961,204072..204092,204199..204219,204318..204338,204426..204464,204567..204587,204695..204715,204818..204838,204927..205249)
location: region:201054-205249:1
so has part: feature:201054-201153:1:exon
so has part: feature:201512-201853:1:exon
so has part: feature:202155-202259:1:exon
so has part: feature:202569-202589:1:exon
so has part: feature:202932-202952:1:exon
so has part: feature:203294-203314:1:exon
so has part: feature:203817-203837:1:exon
so has part: feature:203941-203961:1:exon
so has part: feature:204072-204092:1:exon
so has part: feature:204199-204219:1:exon
so has part: feature:204318-204338:1:exon
so has part: feature:204426-204464:1:exon
so has part: feature:204567-204587:1:exon
so has part: feature:204695-204715:1:exon
so has part: feature:204818-204838:1:exon
so has part: feature:204927-205249:1:exon

XP_015734041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201054-201153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201512-201853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202155-202259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202569-202589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202932-202952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203294-203314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203817-203837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203941-203961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204072-204092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204199-204219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204318-204338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204426-204464:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204567-204587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:204695-204715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204818-204838:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204927-205249:1:exon

LOC116654145
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206821..208808
location: region:206821-208808:1
so has part: feature:206821-208808:1:exon
subclass of: SO_0000010

116654145
type: Gene
SIO_000068: ncbigene

position:206821:1
position: 206821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208808:1
position: 208808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206821-208808:1:exon

LOC116654145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654145
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447991.1
SIO_010081: LOC116654145
subclass of: SO_0000673
so part of: LOC116654145
location: join(206821..207017,207368..207709,208069..208173,208482..208808)
location: region:206821-208808:1
so has part: feature:206821-207017:1:exon
so has part: feature:207368-207709:1:exon
so has part: feature:208069-208173:1:exon
so has part: feature:208482-208808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206821-207017:1:exon

position:207017:1
position: 207017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207368-207709:1:exon

position:207368:1
position: 207368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207709:1
position: 207709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208069-208173:1:exon

position:208069:1
position: 208069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208173:1
position: 208173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208482-208808:1:exon

position:208482:1
position: 208482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654145
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447992.1
SIO_010081: LOC116654145
subclass of: SO_0000673
so part of: LOC116654145
location: join(206821..207017,207368..207709,208069..208173,208326..208470)
location: region:206821-208470:1
so has part: feature:206821-207017:1:exon
so has part: feature:207368-207709:1:exon
so has part: feature:208069-208173:1:exon
so has part: feature:208326-208470:1:exon

position:208470:1
position: 208470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206821-207017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207368-207709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208069-208173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208326-208470:1:exon

position:208326:1
position: 208326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MGFTSGCNHLSFSHPWRTLLAHLVALHLLHLGSAQLTVVAPNPHVTATVGQDVVLRCHLSPCKDAWSSDIRWIQHGSAELLHHYQNGEDLEQMQEYKGRTELLRDGLSDGNLDLRITAVTSADSGTYSCVVHDGDDYAEAVMNLQVSDPFSQVTHPWKVALAVVVTLLVGSFVIIAFLHGKKVAQSRKLSESFQPLSPPKSL
SIO_010081: LOC116654145
subclass of: SO_0000673
so part of: LOC116654145
location: join(206918..207017,207368..207709,208069..208173,208482..208543)
location: region:206918-208543:1
so has part: feature:206918-207017:1:exon
so has part: feature:207368-207709:1:exon
so has part: feature:208069-208173:1:exon
so has part: feature:208482-208543:1:exon

XP_032303882.1
type: Protein
SIO_000068: ncbiprotein

position:206918:1
position: 206918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208543:1
position: 208543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206918-207017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207368-207709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208069-208173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208482-208543:1:exon

LOC116654145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X2
translation: MGFTSGCNHLSFSHPWRTLLAHLVALHLLHLGSAQLTVVAPNPHVTATVGQDVVLRCHLSPCKDAWSSDIRWIQHGSAELLHHYQNGEDLEQMQEYKGRTELLRDGLSDGNLDLRITAVTSADSGTYSCVVHDGDDYAEAVMNLQVSDPFSQVTHPWKVALAVVVTLLVGSFVIIAFLHGKKGRRKRKGVLVGRQ
SIO_010081: LOC116654145
subclass of: SO_0000673
so part of: LOC116654145
location: join(206918..207017,207368..207709,208069..208173,208326..208366)
location: region:206918-208366:1
so has part: feature:206918-207017:1:exon
so has part: feature:207368-207709:1:exon
so has part: feature:208069-208173:1:exon
so has part: feature:208326-208366:1:exon

XP_032303883.1
type: Protein
SIO_000068: ncbiprotein

position:208366:1
position: 208366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206918-207017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207368-207709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208069-208173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208326-208366:1:exon

LOC116654152
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 212217..214349
location: region:212217-214349:1
so has part: feature:212217-214349:1:exon
subclass of: SO_0000010

116654152
type: Gene
SIO_000068: ncbigene

position:212217:1
position: 212217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214349:1
position: 214349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212217-214349:1:exon

LOC116654152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC116654152
product: myelin-oligodendrocyte glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 57 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448009.1
SIO_010081: LOC116654152
subclass of: SO_0000673
so part of: LOC116654152
location: join(212217..212821,213166..213507,213868..214017,214288..214349)
location: region:212217-214349:1
so has part: feature:212217-212821:1:exon
so has part: feature:213166-213507:1:exon
so has part: feature:213868-214017:1:exon
so has part: feature:214288-214349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212217-212821:1:exon

position:212821:1
position: 212821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213166-213507:1:exon

position:213166:1
position: 213166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213507:1
position: 213507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213868-214017:1:exon

position:213868:1
position: 213868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214017:1
position: 214017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214288-214349:1:exon

position:214288:1
position: 214288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116654152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC116654152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like
translation: MGFTSGCKYPSFSHPWRTLLAHLVALHLLHLGSAQLTVVAPNLHVTANVGQDVVLRCQLSPCKDAWHSDIRWFQHGSAGLVHHYQNGLDLEQMEEYKGRTELLRNGLSDGNLDLRITAVSFADSGSYICAVQDFDGYAEAVVELEVSDPFSQIVHPWKVALAVVIILLVGSSVLIIFFLHRKQGELRAEGTEYREVLLAQNRVLSESFQPLPPPKSL
SIO_010081: LOC116654152
subclass of: SO_0000673
so part of: LOC116654152
location: join(212722..212821,213166..213507,213868..214017,214288..214349)
location: region:212722-214349:1
so has part: feature:212722-212821:1:exon
so has part: feature:213166-213507:1:exon
so has part: feature:213868-214017:1:exon
so has part: feature:214288-214349:1:exon

XP_032303900.1
type: Protein
SIO_000068: ncbiprotein

position:212722:1
position: 212722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212722-212821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213166-213507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213868-214017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214288-214349:1:exon

LOC107321534
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214350..219411
location: region:214350-219411:1
so has part: feature:214350-219411:1:exon
subclass of: SO_0000010

107321534
type: Gene
SIO_000068: ncbigene

position:214350:1
position: 214350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219411:1
position: 219411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214350-219411:1:exon

LOC107321534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321534
product: protein CIP2A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447987.1
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(214350..214677,214787..214807,215048..215068,215179..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219411)
location: region:214350-219411:1
so has part: feature:214350-214677:1:exon
so has part: feature:214787-214807:1:exon
so has part: feature:215048-215068:1:exon
so has part: feature:215179-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214350-214677:1:exon

position:214677:1
position: 214677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214787-214807:1:exon

position:214787:1
position: 214787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214807:1
position: 214807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215048-215068:1:exon

position:215048:1
position: 215048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215068:1
position: 215068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215179-215199:1:exon

position:215179:1
position: 215179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215199:1
position: 215199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215551-215571:1:exon

position:215551:1
position: 215551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215571:1
position: 215571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215681-215701:1:exon

position:215681:1
position: 215681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215701:1
position: 215701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215805-215825:1:exon

position:215805:1
position: 215805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215825:1
position: 215825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215936-215956:1:exon

position:215936:1
position: 215936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215956:1
position: 215956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:216061-216081:1:exon

position:216061:1
position: 216061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216081:1
position: 216081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:216180-216200:1:exon

position:216180:1
position: 216180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216200:1
position: 216200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:216307-216327:1:exon

position:216307:1
position: 216307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216327:1
position: 216327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:216430-216450:1:exon

position:216430:1
position: 216430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216450:1
position: 216450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:216558-216578:1:exon

position:216558:1
position: 216558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216578:1
position: 216578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:216681-216701:1:exon

position:216681:1
position: 216681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216701:1
position: 216701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:216809-216832:1:exon

position:216809:1
position: 216809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216832:1
position: 216832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:216942-216962:1:exon

position:216942:1
position: 216942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216962:1
position: 216962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:217066-217086:1:exon

position:217066:1
position: 217066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217086:1
position: 217086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:218079-218099:1:exon

position:218079:1
position: 218079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218099:1
position: 218099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:218194-218214:1:exon

position:218194:1
position: 218194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218214:1
position: 218214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:218325-218345:1:exon

position:218325:1
position: 218325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218345:1
position: 218345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:218450-218470:1:exon

position:218450:1
position: 218450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218470:1
position: 218470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:218571-218591:1:exon

position:218571:1
position: 218571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218591:1
position: 218591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:218696-218716:1:exon

position:218696:1
position: 218696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218716:1
position: 218716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:218823-218843:1:exon

position:218823:1
position: 218823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218843:1
position: 218843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:218938-219411:1:exon

position:218938:1
position: 218938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321534
product: protein CIP2A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447989.1
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(214350..214677,214787..214807,215048..215068,215179..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216812..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219411)
location: region:214350-219411:1
so has part: feature:214350-214677:1:exon
so has part: feature:214787-214807:1:exon
so has part: feature:215048-215068:1:exon
so has part: feature:215179-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216812-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214350-214677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214787-214807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215048-215068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215179-215199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216307-216327:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216812-216832:1:exon

position:216812:1
position: 216812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:218938-219411:1:exon

LOC107321534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321534
product: protein CIP2A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447990.1
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(214350..214677,214787..214807,215048..215068,215179..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219411)
location: region:214350-219411:1
so has part: feature:214350-214677:1:exon
so has part: feature:214787-214807:1:exon
so has part: feature:215048-215068:1:exon
so has part: feature:215179-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214350-214677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214787-214807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215048-215068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215179-215199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216809-216832:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:218938-219411:1:exon

LOC107321534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321534
product: protein CIP2A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032447988.1
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(214691..214807,215048..215068,215179..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219411)
location: region:214691-219411:1
so has part: feature:214691-214807:1:exon
so has part: feature:215048-215068:1:exon
so has part: feature:215179-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219411:1:exon

position:214691:1
position: 214691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214691-214807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215048-215068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215179-215199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216307-216327:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216809-216832:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:218938-219411:1:exon

LOC107321534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CIP2A-like isoform X1
translation: MERTDELLVKLPSILKRSDAKLDTLAGKLVEITEKFDIWNSQLKIHYRIMQLRAFQLKNLVAELEKTDTVLAEIRAVKIVERTEALEIQRSKLENHCEEMDSIVAVLKKHTAELEVHSSEMERRDEMLEEQVAKLVEQTEAFQKPSRRGLEDEPCHTVTIGDELHGPQIAQDTKPTISPSQQGNPQQDQEEPVSVLSENPAVL
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(215196..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219122)
location: region:215196-219122:1
so has part: feature:215196-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219122:1:exon

XP_032303878.1
type: Protein
SIO_000068: ncbiprotein

position:215196:1
position: 215196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219122:1
position: 219122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215196-215199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216307-216327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216809-216832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218938-219122:1:exon

LOC107321534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CIP2A-like isoform X1
translation: MERTDELLVKLPSILKRSDAKLDTLAGKLVEITEKFDIWNSQLKIHYRIMQLRAFQLKNLVAELEKTDTVLAEIRAVKIVERTEALEIQRSKLENHCEEMDSIVAVLKKHTAELEVHSSEMERRDEMLEEQVAKLVEQTEAFQKPSRRGLEDEPCHTVTIGDELHGPQIAQDTKPTISPSQQGNPQQDQEEPVSVLSENPAVL
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(215196..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219122)
location: region:215196-219122:1
so has part: feature:215196-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219122:1:exon

XP_032303879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215196-215199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216307-216327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216809-216832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218938-219122:1:exon

LOC107321534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CIP2A-like isoform X2
translation: MERTDELLVKLPSILKRSDAKLDTLAGKLVEITEKFDIWNSQLKIHYRIMQLRAFQLKNLVAELEKTDTVLEIRAVKIVERTEALEIQRSKLENHCEEMDSIVAVLKKHTAELEVHSSEMERRDEMLEEQVAKLVEQTEAFQKPSRRGLEDEPCHTVTIGDELHGPQIAQDTKPTISPSQQGNPQQDQEEPVSVLSENPAVL
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(215196..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216307..216327,216430..216450,216558..216578,216681..216701,216812..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219122)
location: region:215196-219122:1
so has part: feature:215196-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216307-216327:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216812-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219122:1:exon

XP_032303880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215196-215199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216307-216327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216812-216832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218938-219122:1:exon

LOC107321534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107321534 isoform X3
translation: MERTDELLVKLPSILKRSDAKLDTLAGKLVEITEKFDIWNSQLKLRAFQLKNLVAELEKTDTVLAEIRAVKIVERTEALEIQRSKLENHCEEMDSIVAVLKKHTAELEVHSSEMERRDEMLEEQVAKLVEQTEAFQKPSRRGLEDEPCHTVTIGDELHGPQIAQDTKPTISPSQQGNPQQDQEEPVSVLSENPAVL
SIO_010081: LOC107321534
subclass of: SO_0000673
so part of: LOC107321534
location: join(215196..215199,215551..215571,215681..215701,215805..215825,215936..215956,216061..216081,216180..216200,216430..216450,216558..216578,216681..216701,216809..216832,216942..216962,217066..217086,218079..218099,218194..218214,218325..218345,218450..218470,218571..218591,218696..218716,218823..218843,218938..219122)
location: region:215196-219122:1
so has part: feature:215196-215199:1:exon
so has part: feature:215551-215571:1:exon
so has part: feature:215681-215701:1:exon
so has part: feature:215805-215825:1:exon
so has part: feature:215936-215956:1:exon
so has part: feature:216061-216081:1:exon
so has part: feature:216180-216200:1:exon
so has part: feature:216430-216450:1:exon
so has part: feature:216558-216578:1:exon
so has part: feature:216681-216701:1:exon
so has part: feature:216809-216832:1:exon
so has part: feature:216942-216962:1:exon
so has part: feature:217066-217086:1:exon
so has part: feature:218079-218099:1:exon
so has part: feature:218194-218214:1:exon
so has part: feature:218325-218345:1:exon
so has part: feature:218450-218470:1:exon
so has part: feature:218571-218591:1:exon
so has part: feature:218696-218716:1:exon
so has part: feature:218823-218843:1:exon
so has part: feature:218938-219122:1:exon

XP_032303881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215196-215199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215551-215571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215681-215701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215805-215825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215936-215956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216061-216081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216180-216200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216430-216450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216558-216578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216681-216701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216809-216832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216942-216962:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217066-217086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218079-218099:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218194-218214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:218325-218345:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:218450-218470:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:218571-218591:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:218696-218716:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:218823-218843:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:218938-219122:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 220550..220631
location: region:220550-220631:1
so has part: feature:220550-220631:1:exon
subclass of: SO_0000663

116654153
type: Gene
SIO_000068: ncbigene

position:220550:1
position: 220550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220631:1
position: 220631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220550-220631:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:220584..220586,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 220550..220631
location: region:220550-220631:1
so has part: feature:220550-220631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220550-220631:1:exon

LOC107321540
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221179..225216)
location: region:221179-225216:-1
so has part: feature:221179-225216:-1:exon
subclass of: SO_0000010

107321540
type: Gene
SIO_000068: ncbigene

position:221179:-1
position: 221179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225216:-1
position: 225216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221179-225216:-1:exon

LOC107321540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321540
product: E3 ubiquitin-protein ligase TRIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015878540.2
SIO_010081: LOC107321540
subclass of: SO_0000673
so part of: LOC107321540
location: complement(join(221179..221918,222159..222215,222491..222606,222922..222944,223050..223280,223357..223452,223599..223969,224660..225216))
location: region:221179-225216:-1
so has part: feature:224660-225216:-1:exon
so has part: feature:223599-223969:-1:exon
so has part: feature:223357-223452:-1:exon
so has part: feature:223050-223280:-1:exon
so has part: feature:222922-222944:-1:exon
so has part: feature:222491-222606:-1:exon
so has part: feature:222159-222215:-1:exon
so has part: feature:221179-221918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224660-225216:-1:exon

position:224660:-1
position: 224660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223599-223969:-1:exon

position:223599:-1
position: 223599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223969:-1
position: 223969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223357-223452:-1:exon

position:223357:-1
position: 223357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223452:-1
position: 223452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223050-223280:-1:exon

position:223050:-1
position: 223050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223280:-1
position: 223280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222922-222944:-1:exon

position:222922:-1
position: 222922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222944:-1
position: 222944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222491-222606:-1:exon

position:222491:-1
position: 222491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222606:-1
position: 222606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222159-222215:-1:exon

position:222159:-1
position: 222159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222215:-1
position: 222215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:221179-221918:-1:exon

position:221918:-1
position: 221918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7
translation: MASAVPGAKEKGDEGSHHPIPEHQMGNGCSSSVGHGGGISHRNHLRKGNFHTKLHLEHLAEKLKLLGLDGDKGEKEKICSWRKRTFLSNGPRDDGDPNGAPIKESVQEDGEQICSYLENLKKHKEELLELKMNGERRCQDFMTRTEAERQKIVSGFRQIRCFLKEKEVMLLAQLGELDRAVLRRQEEEEAKVEGDISLLSILICEMEEKLKRPTHGFLQDARRTLDRWEMGRTQRMMENFIDVERRLHIISQQHQILCEALGRFQDLLSSELEREEGTSEEEGKAFVTLDPTTATAGLVLSRDRRGVRWMDIGHNVSPCPQRFDVSCCVLGCQGFTSGQHFWDVEVISGGTWALGVARSSVPRKGWLTFHPDYGIWAMGCCRNGYRAFTSPPSTLPVSGNPNRIRVVLDYGGGRVIFYLAAQKDPIYAFQNASFYGESIFPFFWVGRGSHLRLCP
SIO_010081: LOC107321540
subclass of: SO_0000673
so part of: LOC107321540
location: complement(join(221404..221918,222159..222215,222491..222606,222922..222944,223050..223280,223357..223452,223599..223928))
location: region:221404-223928:-1
so has part: feature:223599-223928:-1:exon
so has part: feature:223357-223452:-1:exon
so has part: feature:223050-223280:-1:exon
so has part: feature:222922-222944:-1:exon
so has part: feature:222491-222606:-1:exon
so has part: feature:222159-222215:-1:exon
so has part: feature:221404-221918:-1:exon

XP_015734026.1
type: Protein
SIO_000068: ncbiprotein

position:221404:-1
position: 221404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223928:-1
position: 223928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223599-223928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223357-223452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223050-223280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222922-222944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222491-222606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222159-222215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221404-221918:-1:exon

LOC107321541
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(225349..240269)
location: region:225349-240269:-1
so has part: feature:225349-240269:-1:exon
subclass of: SO_0000010

107321541
type: Gene
SIO_000068: ncbigene

position:225349:-1
position: 225349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240269:-1
position: 240269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225349-240269:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015878543.1
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..239936,240163..240269))
location: region:225349-240269:-1
so has part: feature:240163-240269:-1:exon
so has part: feature:238346-239936:-1:exon
so has part: feature:237422-237473:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:225349-226896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240163-240269:-1:exon

position:240163:-1
position: 240163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238346-239936:-1:exon

position:238346:-1
position: 238346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239936:-1
position: 239936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237422-237473:-1:exon

position:237422:-1
position: 237422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237473:-1
position: 237473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:237313-237333:-1:exon

position:237313:-1
position: 237313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237333:-1
position: 237333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237000-237020:-1:exon

position:237000:-1
position: 237000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237020:-1
position: 237020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236897-236917:-1:exon

position:236897:-1
position: 236897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236917:-1
position: 236917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236780-236800:-1:exon

position:236780:-1
position: 236780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236800:-1
position: 236800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236535-236555:-1:exon

position:236535:-1
position: 236535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236555:-1
position: 236555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:236414-236434:-1:exon

position:236414:-1
position: 236414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236434:-1
position: 236434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236143-236163:-1:exon

position:236143:-1
position: 236143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236163:-1
position: 236163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:235910-235930:-1:exon

position:235910:-1
position: 235910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235930:-1
position: 235930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:235767-235787:-1:exon

position:235767:-1
position: 235767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235787:-1
position: 235787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:235267-235287:-1:exon

position:235267:-1
position: 235267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235287:-1
position: 235287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:234992-235012:-1:exon

position:234992:-1
position: 234992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235012:-1
position: 235012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:234878-234898:-1:exon

position:234878:-1
position: 234878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234898:-1
position: 234898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:234735-234755:-1:exon

position:234735:-1
position: 234735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234755:-1
position: 234755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:234508-234528:-1:exon

position:234508:-1
position: 234508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234528:-1
position: 234528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:234118-234138:-1:exon

position:234118:-1
position: 234118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234138:-1
position: 234138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:233944-233964:-1:exon

position:233944:-1
position: 233944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233964:-1
position: 233964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:233712-233732:-1:exon

position:233712:-1
position: 233712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233732:-1
position: 233732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:232852-232872:-1:exon

position:232852:-1
position: 232852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232872:-1
position: 232872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:232658-232678:-1:exon

position:232658:-1
position: 232658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232678:-1
position: 232678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:232559-232579:-1:exon

position:232559:-1
position: 232559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232579:-1
position: 232579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:232248-232268:-1:exon

position:232248:-1
position: 232248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232268:-1
position: 232268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:231244-231264:-1:exon

position:231244:-1
position: 231244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231264:-1
position: 231264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:231003-231023:-1:exon

position:231003:-1
position: 231003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231023:-1
position: 231023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:230488-230508:-1:exon

position:230488:-1
position: 230488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230508:-1
position: 230508
reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:230297-230317:-1:exon

position:230297:-1
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reference: sequence
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position:230317:-1
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urn:…
SIO_000300: 29
SIO_000628: feature:229999-230019:-1:exon

position:229999:-1
position: 229999
reference: sequence
type: ReverseStrandPosition
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position:230019:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:229363-229383:-1:exon

position:229363:-1
position: 229363
reference: sequence
type: ReverseStrandPosition
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position:229383:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:229120-229143:-1:exon

position:229120:-1
position: 229120
reference: sequence
type: ReverseStrandPosition
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position:229143:-1
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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:229009-229029:-1:exon

position:229009:-1
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reference: sequence
type: ReverseStrandPosition
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position:229029:-1
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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:228811-228867:-1:exon

position:228811:-1
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reference: sequence
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position:228867:-1
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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:228384-228404:-1:exon

position:228384:-1
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reference: sequence
type: ReverseStrandPosition
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position:228404:-1
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urn:…
SIO_000300: 35
SIO_000628: feature:228228-228248:-1:exon

position:228228:-1
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reference: sequence
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position:228248:-1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:228094-228114:-1:exon

position:228094:-1
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reference: sequence
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position:228114:-1
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:227887-227907:-1:exon

position:227887:-1
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reference: sequence
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position:227907:-1
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urn:…
SIO_000300: 38
SIO_000628: feature:227274-227294:-1:exon

position:227274:-1
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position:227294:-1
position: 227294
reference: sequence
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urn:…
SIO_000300: 39
SIO_000628: feature:227162-227182:-1:exon

position:227162:-1
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reference: sequence
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position:227182:-1
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urn:…
SIO_000300: 40
SIO_000628: feature:225349-226896:-1:exon

position:226896:-1
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reference: sequence
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LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015878544.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237017,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
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so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
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so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:225349-226896:-1:exon

position:240244:-1
position: 240244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238346-240244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237422-237473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237000-237017:-1:exon

position:237017:-1
position: 237017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236780-236800:-1:exon

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SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236414-236434:-1:exon

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SIO_000300: 9
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:234118-234138:-1:exon

urn:…
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SIO_000628: feature:233944-233964:-1:exon

urn:…
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SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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SIO_000300: 27
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urn:…
SIO_000300: 28
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228811-228867:-1:exon

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SIO_000300: 33
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015878546.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
so has part: feature:237422-237473:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236143-236163:-1:exon
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so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
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so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
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so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:225349-226896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238346-240244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237422-237473:-1:exon

urn:…
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SIO_000628: feature:236143-236163:-1:exon

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urn:…
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SIO_000628: feature:235767-235787:-1:exon

urn:…
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urn:…
SIO_000300: 37
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015878547.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 38
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LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_015878550.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
so has part: feature:237422-237473:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
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so has part: feature:230297-230317:-1:exon
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so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
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so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:225349-226896:-1:exon

urn:…
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SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015878545.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
so has part: feature:237422-237473:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
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so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
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so has part: feature:225349-226896:-1:exon

urn:…
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urn:…
SIO_000300: 38
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_015878548.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228831,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
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urn:…
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position:228831:-1
position: 228831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 39
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321541
product: tripartite motif-containing protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015878542.2
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(225349..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237473,238346..240244))
location: region:225349-240244:-1
so has part: feature:238346-240244:-1:exon
so has part: feature:237422-237473:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:225349-226896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238346-240244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237422-237473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:225349-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X2
translation: MMASGKRNADLEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237017,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237017:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734030.1
type: Protein
SIO_000068: ncbiprotein

position:226385:-1
position: 226385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237434:-1
position: 237434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X5
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X4
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X7
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X3
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIKDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X6
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228831,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228831:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228811-228831:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X1
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:226385-226896:-1:exon

LOC107321541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10 isoform X1
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIDNLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTSLLGDRDSKLRKLTSELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHEAEIRRLTELLEDRDSDARERDILIRKLSEELEELRGQEVEESDLETDLSFLFSFSPFSEERDAKIGELSAEVEKQERRIDELTAELEHYKAKAIKCFEEHGRSEEKLVNVTLDPDTAHPRLILSEDQKSVRWEYSFQESPDGPERFDVDPCVLGCESFTSGRHCWVVDLSEGQYCAVGVSRESLQRKGAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYEWGEVAFFDAENQIPIFTFPLARFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC107321541
subclass of: SO_0000673
so part of: LOC107321541
location: complement(join(226385..226896,227162..227182,227274..227294,227887..227907,228094..228114,228228..228248,228384..228404,228811..228867,229009..229029,229120..229143,229363..229383,229999..230019,230297..230317,230488..230508,231003..231023,231244..231264,232248..232268,232559..232579,232658..232678,232852..232872,233712..233732,233944..233964,234118..234138,234508..234528,234735..234755,234878..234898,234992..235012,235267..235287,235767..235787,235910..235930,236143..236163,236414..236434,236535..236555,236780..236800,236897..236917,237000..237020,237313..237333,237422..237434))
location: region:226385-237434:-1
so has part: feature:237422-237434:-1:exon
so has part: feature:237313-237333:-1:exon
so has part: feature:237000-237020:-1:exon
so has part: feature:236897-236917:-1:exon
so has part: feature:236780-236800:-1:exon
so has part: feature:236535-236555:-1:exon
so has part: feature:236414-236434:-1:exon
so has part: feature:236143-236163:-1:exon
so has part: feature:235910-235930:-1:exon
so has part: feature:235767-235787:-1:exon
so has part: feature:235267-235287:-1:exon
so has part: feature:234992-235012:-1:exon
so has part: feature:234878-234898:-1:exon
so has part: feature:234735-234755:-1:exon
so has part: feature:234508-234528:-1:exon
so has part: feature:234118-234138:-1:exon
so has part: feature:233944-233964:-1:exon
so has part: feature:233712-233732:-1:exon
so has part: feature:232852-232872:-1:exon
so has part: feature:232658-232678:-1:exon
so has part: feature:232559-232579:-1:exon
so has part: feature:232248-232268:-1:exon
so has part: feature:231244-231264:-1:exon
so has part: feature:231003-231023:-1:exon
so has part: feature:230488-230508:-1:exon
so has part: feature:230297-230317:-1:exon
so has part: feature:229999-230019:-1:exon
so has part: feature:229363-229383:-1:exon
so has part: feature:229120-229143:-1:exon
so has part: feature:229009-229029:-1:exon
so has part: feature:228811-228867:-1:exon
so has part: feature:228384-228404:-1:exon
so has part: feature:228228-228248:-1:exon
so has part: feature:228094-228114:-1:exon
so has part: feature:227887-227907:-1:exon
so has part: feature:227274-227294:-1:exon
so has part: feature:227162-227182:-1:exon
so has part: feature:226385-226896:-1:exon

XP_015734029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237422-237434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237313-237333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237000-237020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236897-236917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236780-236800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236535-236555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236414-236434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236143-236163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235910-235930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235767-235787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235267-235287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234992-235012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:234878-234898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:234735-234755:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:234508-234528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:234118-234138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:233944-233964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233712-233732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232852-232872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232658-232678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232559-232579:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232248-232268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231244-231264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:231003-231023:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230488-230508:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230297-230317:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:229999-230019:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:229363-229383:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:229120-229143:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:229009-229029:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:228811-228867:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:228384-228404:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:228228-228248:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:228094-228114:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:227887-227907:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:227274-227294:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:227162-227182:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:226385-226896:-1:exon

RACK1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240299..246760
location: region:240299-246760:1
so has part: feature:240299-246760:1:exon
subclass of: SO_0000010

107321547
type: Gene
SIO_000068: ncbigene

position:240299:1
position: 240299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246760:1
position: 246760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240299-246760:1:exon

RACK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: RACK1
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 187 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015878561.2
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(240299..240521,243978..244149,244919..245066,245357..245452,245581..245691,245886..246026,246382..246492,246632..246760)
location: region:240299-246760:1
so has part: feature:240299-240521:1:exon
so has part: feature:243978-244149:1:exon
so has part: feature:244919-245066:1:exon
so has part: feature:245357-245452:1:exon
so has part: feature:245581-245691:1:exon
so has part: feature:245886-246026:1:exon
so has part: feature:246382-246492:1:exon
so has part: feature:246632-246760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240299-240521:1:exon

position:240521:1
position: 240521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243978-244149:1:exon

position:243978:1
position: 243978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244149:1
position: 244149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244919-245066:1:exon

position:244919:1
position: 244919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245066:1
position: 245066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245357-245452:1:exon

position:245357:1
position: 245357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245452:1
position: 245452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245581-245691:1:exon

position:245581:1
position: 245581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245691:1
position: 245691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245886-246026:1:exon

position:245886:1
position: 245886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246026:1
position: 246026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:246382-246492:1:exon

position:246382:1
position: 246382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246492:1
position: 246492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246632-246760:1:exon

position:246632:1
position: 246632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(240413..240521,243978..244149,244919..245066,245357..245452,245581..245691,245886..246026,246382..246492,246632..246697)
location: region:240413-246697:1
so has part: feature:240413-240521:1:exon
so has part: feature:243978-244149:1:exon
so has part: feature:244919-245066:1:exon
so has part: feature:245357-245452:1:exon
so has part: feature:245581-245691:1:exon
so has part: feature:245886-246026:1:exon
so has part: feature:246382-246492:1:exon
so has part: feature:246632-246697:1:exon

XP_015734047.1
type: Protein
SIO_000068: ncbiprotein

position:240413:1
position: 240413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246697:1
position: 246697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240413-240521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243978-244149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244919-245066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245357-245452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245581-245691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245886-246026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246382-246492:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246632-246697:1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247210..255079)
location: region:247210-255079:-1
so has part: feature:247210-255079:-1:exon
subclass of: SO_0000010

107321553
type: Gene
SIO_000068: ncbigene

position:247210:-1
position: 247210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255079:-1
position: 255079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247210-255079:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TRIM41
product: tripartite motif containing 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015878571.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(247210..248806,249680..249807,250366..250388,250784..251014,251498..251593,251961..252466,252517..252546,254459..255079))
location: region:247210-255079:-1
so has part: feature:254459-255079:-1:exon
so has part: feature:252517-252546:-1:exon
so has part: feature:251961-252466:-1:exon
so has part: feature:251498-251593:-1:exon
so has part: feature:250784-251014:-1:exon
so has part: feature:250366-250388:-1:exon
so has part: feature:249680-249807:-1:exon
so has part: feature:247210-248806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254459-255079:-1:exon

position:254459:-1
position: 254459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252517-252546:-1:exon

position:252517:-1
position: 252517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252546:-1
position: 252546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251961-252466:-1:exon

position:251961:-1
position: 251961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252466:-1
position: 252466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251498-251593:-1:exon

position:251498:-1
position: 251498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251593:-1
position: 251593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250784-251014:-1:exon

position:250784:-1
position: 250784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251014:-1
position: 251014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250366-250388:-1:exon

position:250366:-1
position: 250366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250388:-1
position: 250388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:249680-249807:-1:exon

position:249680:-1
position: 249680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249807:-1
position: 249807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247210-248806:-1:exon

position:248806:-1
position: 248806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41
translation: MDPVGEDGASSGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCIAQLWGGGGEAELEESGGAAALEEEEEEEELEEEEEEELGEEELDVEQEEEEEDGGGEEDDDDMWSEKDTEGTLWGDPVEEELWDGGGVQGELYFGDDDYDEDVMEEDVEEEEEEEDEAQSPPPSRPRRLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPASPSASGGPGGNTGILAATGGRGRPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKYKLQSHLEPLKKKLDAVLKQKSNEQEKITELREKMKLEIKEFESDFELLHQFLIGEHVLLLHQLEERYESLLARQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFIRCENIKFQEPEMVLVDVGKKYRNYFLQDVVMRKMEKAFSKVPRADITLDPDTAHPRLSLSLDRRSVKLAERRQELPDNPKRFDSDYCVLGSQGFTTGRHYWEVEVGGRKGWAVGAARETARRKEKPMGPHPKREIWCVGTNGKKYQALTATEQTALSPSERPRRFGVYLDYERGQLCFYNAESMTHIHTFNASFRERIFPFFRILAKGTRIKICT
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(248289..248806,249680..249807,250366..250388,250784..251014,251498..251593,251961..252466,252517..252546,254459..254804))
location: region:248289-254804:-1
so has part: feature:254459-254804:-1:exon
so has part: feature:252517-252546:-1:exon
so has part: feature:251961-252466:-1:exon
so has part: feature:251498-251593:-1:exon
so has part: feature:250784-251014:-1:exon
so has part: feature:250366-250388:-1:exon
so has part: feature:249680-249807:-1:exon
so has part: feature:248289-248806:-1:exon

XP_015734057.1
type: Protein
SIO_000068: ncbiprotein

position:248289:-1
position: 248289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254804:-1
position: 254804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254459-254804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252517-252546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251961-252466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251498-251593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250784-251014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250366-250388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:249680-249807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:248289-248806:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 255244..255316
location: region:255244-255316:1
so has part: feature:255244-255316:1:exon
subclass of: SO_0000663

116654164
type: Gene
SIO_000068: ncbigene

position:255244:1
position: 255244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255316:1
position: 255316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255244-255316:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:255277..255279,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 255244..255316
location: region:255244-255316:1
so has part: feature:255244-255316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255244-255316:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 255665..255737
location: region:255665-255737:1
so has part: feature:255665-255737:1:exon
subclass of: SO_0000663

116654171
type: Gene
SIO_000068: ncbigene

position:255665:1
position: 255665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255737:1
position: 255737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255665-255737:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:255698..255700,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 255665..255737
location: region:255665-255737:1
so has part: feature:255665-255737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255665-255737:1:exon

LOC107321537
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256988..264030
location: region:256988-264030:1
so has part: feature:256988-264030:1:exon
subclass of: SO_0000010

107321537
type: Gene
SIO_000068: ncbigene

position:256988:1
position: 256988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264030:1
position: 264030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256988-264030:1:exon

LOC107321537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321537
product: zinc finger protein RFP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_015878536.2
SIO_010081: LOC107321537
subclass of: SO_0000673
so part of: LOC107321537
location: join(256988..257411,258641..258733,260210..260440,261217..261239,261436..261551,262534..262563,263120..264030)
location: region:256988-264030:1
so has part: feature:256988-257411:1:exon
so has part: feature:258641-258733:1:exon
so has part: feature:260210-260440:1:exon
so has part: feature:261217-261239:1:exon
so has part: feature:261436-261551:1:exon
so has part: feature:262534-262563:1:exon
so has part: feature:263120-264030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256988-257411:1:exon

position:257411:1
position: 257411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258641-258733:1:exon

position:258641:1
position: 258641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258733:1
position: 258733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260210-260440:1:exon

position:260210:1
position: 260210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260440:1
position: 260440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261217-261239:1:exon

position:261217:1
position: 261217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261239:1
position: 261239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261436-261551:1:exon

position:261436:1
position: 261436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261551:1
position: 261551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262534-262563:1:exon

position:262534:1
position: 262534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262563:1
position: 262563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:263120-264030:1:exon

position:263120:1
position: 263120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like
translation: MSAPSPLHTLHIESSCSICLCYFHDPVSIPCGHNFCRGCITRCWAGLDSHFPCPQCRKITSQPSFRPSIELANIASIARQLRAQCNAWCNQHPEGSRLFCKEDGEPVCAQCDGFRDHGGHTVLPAQQAAREYKEEIQARLRASKEEREKYLESRKTGGRTGLYLDQTKKEGKRIVCEFDQLRQFLKEKERFLLLQLSDLDRTVTKVQEDAVTKVLEEISHLDTLIWEMEGKFQQPDSKFLLDIRRLLNSCEMMKFNPPAEISPILERRLEDFLQKNVAVRRTLRQCQDSLMFQLQEPANVTMDPTTAHPNLYLSEDRKQVRGQLIPQDLPDNPERFSFETCVLGCQGFTSGRHFWEVDVGQGGVWALGAARASIKRKGPMSFSPKEGVWALEAYHSLTSPRANLRLNALPRRIRVSLDYEGGRVAFFSSDDDTPILVYTRASFNGERVLPWFKIGMGARLQEITPNSPLEEQTASGQLMSHLDWVGFRSPLKICP
SIO_010081: LOC107321537
subclass of: SO_0000673
so part of: LOC107321537
location: join(257013..257411,258641..258733,260210..260440,261217..261239,261436..261551,262534..262563,263120..263715)
location: region:257013-263715:1
so has part: feature:257013-257411:1:exon
so has part: feature:258641-258733:1:exon
so has part: feature:260210-260440:1:exon
so has part: feature:261217-261239:1:exon
so has part: feature:261436-261551:1:exon
so has part: feature:262534-262563:1:exon
so has part: feature:263120-263715:1:exon

XP_015734022.1
type: Protein
SIO_000068: ncbiprotein

position:257013:1
position: 257013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263715:1
position: 263715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257013-257411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258641-258733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260210-260440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261217-261239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261436-261551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262534-262563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263120-263715:1:exon

LOC107321535
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <265793..269163
location: region:265793-269163:1
so has part: feature:265793-269163:1:exon
subclass of: SO_0000010

107321535
type: Gene
SIO_000068: ncbigene

position:265793:1
position: 265793
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:269163:1
position: 269163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265793-269163:1:exon

LOC107321535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321535
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_032448010.1
SIO_010081: LOC107321535
subclass of: SO_0000673
so part of: LOC107321535
location: join(<265793..265894,266741..266763,266985..267097,268201..269163)
location: region:265793-269163:1
so has part: feature:265793-265894:1:exon
so has part: feature:266741-266763:1:exon
so has part: feature:266985-267097:1:exon
so has part: feature:268201-269163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:265793-265894:1:exon

position:265894:1
position: 265894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266741-266763:1:exon

position:266741:1
position: 266741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266763:1
position: 266763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266985-267097:1:exon

position:266985:1
position: 266985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267097:1
position: 267097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268201-269163:1:exon

position:268201:1
position: 268201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: QLEDLKNEIEKRQKNTIKLSEAETKAQGEKSQHSDVKSPITRCGKVTFQLPTGASPGPEERVCHFSWRNGMKETLKKLQAIITLDPDTAHPDLILSEDLKSVKRGEGQRDLPDNPERFAYWPFVLGQQSFSAGRHCWEVEVGDEGDWAIGVARESIPRKGQLNLCPKGGIWGVEKWGGQVRALTTHKVTLLALRWVPRRVSIHLDYIGGTVAFFDADEGGLIFVFSHVSFGGERVRPWLWVVGVRSKLRLCP
SIO_010081: LOC107321535
subclass of: SO_0000673
so part of: LOC107321535
location: join(<265793..265894,266741..266763,266985..267097,268201..268721)
location: region:265793-268721:1
so has part: feature:265793-265894:1:exon
so has part: feature:266741-266763:1:exon
so has part: feature:266985-267097:1:exon
so has part: feature:268201-268721:1:exon

XP_032303901.1
type: Protein
SIO_000068: ncbiprotein

position:268721:1
position: 268721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265793-265894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266741-266763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266985-267097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268201-268721:1:exon

LOC107321538
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269286..274520)
location: region:269286-274520:-1
so has part: feature:269286-274520:-1:exon
subclass of: SO_0000010

107321538
type: Gene
SIO_000068: ncbigene

position:269286:-1
position: 269286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274520:-1
position: 274520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269286-274520:-1:exon

LOC107321538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321538
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015878537.2
SIO_010081: LOC107321538
subclass of: SO_0000673
so part of: LOC107321538
location: complement(join(269286..270073,270332..270361,270502..270617,270731..270753,270888..271118,271543..271638,272175..274520))
location: region:269286-274520:-1
so has part: feature:272175-274520:-1:exon
so has part: feature:271543-271638:-1:exon
so has part: feature:270888-271118:-1:exon
so has part: feature:270731-270753:-1:exon
so has part: feature:270502-270617:-1:exon
so has part: feature:270332-270361:-1:exon
so has part: feature:269286-270073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272175-274520:-1:exon

position:272175:-1
position: 272175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271543-271638:-1:exon

position:271543:-1
position: 271543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271638:-1
position: 271638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270888-271118:-1:exon

position:270888:-1
position: 270888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271118:-1
position: 271118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270731-270753:-1:exon

position:270731:-1
position: 270731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270753:-1
position: 270753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270502-270617:-1:exon

position:270502:-1
position: 270502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270617:-1
position: 270617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270332-270361:-1:exon

position:270332:-1
position: 270332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270361:-1
position: 270361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269286-270073:-1:exon

position:270073:-1
position: 270073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MAEPNPAPHLPNEASCPICLEYYQDPVSIHCGHSFCRQCITRCWEWSTGGFCCPQCKETAEERTLYPNRELAKVLEIARRLSLQAAQRDVVGQDGCKKHQEPLSIYCKDDGAFICMICRESRLHRAHAMLPVHDAVQEYKEQIQSHLQALKEDREKLLGFREAEMKRNWDYLEKTSTERQKVLGAFEGLRLFLEEQEHHLLAQLENMERDVEKTQEENITILTKEISRLDTIIQDMEEKCQQPASQFLQDIKSTLSRLGKENFHQPMLLLPDLEKNLIHFREKNNTLEEILKNFKENLTFEVPEKMNVTLDPTTAHPQLAVSEDGRSVRWEDAQQDAANEECGTDPFVLGHEGITSGRCCWEVEVTPKGSWAVGVAKESLKRREENHASPEIELWSMGFCEGQIWALSSFERMTLPQIQVPRRVRVTLDYERGQVAFFDADKRALIFIFPPASFKGESIHPWFLVWGEGSQITLRL
SIO_010081: LOC107321538
subclass of: SO_0000673
so part of: LOC107321538
location: complement(join(269559..270073,270332..270361,270502..270617,270731..270753,270888..271118,271543..271638,272175..272594))
location: region:269559-272594:-1
so has part: feature:272175-272594:-1:exon
so has part: feature:271543-271638:-1:exon
so has part: feature:270888-271118:-1:exon
so has part: feature:270731-270753:-1:exon
so has part: feature:270502-270617:-1:exon
so has part: feature:270332-270361:-1:exon
so has part: feature:269559-270073:-1:exon

XP_015734023.1
type: Protein
SIO_000068: ncbiprotein

position:269559:-1
position: 269559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272594:-1
position: 272594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272175-272594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271543-271638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270888-271118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270731-270753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270502-270617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270332-270361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269559-270073:-1:exon

LOC107321539
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272440..284361
location: region:272440-284361:1
so has part: feature:272440-284361:1:exon
subclass of: SO_0000010

107321539
type: Gene
SIO_000068: ncbigene

position:272440:1
position: 272440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284361:1
position: 284361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272440-284361:1:exon

LOC107321539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321539
product: E3 ubiquitin-protein ligase TRIM39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015878539.1
SIO_010081: LOC107321539
subclass of: SO_0000673
so part of: LOC107321539
location: join(272440..272525,275277..275756,277150..277245,277511..277741,279806..279828,280161..280276,280943..281672)
location: region:272440-281672:1
so has part: feature:272440-272525:1:exon
so has part: feature:275277-275756:1:exon
so has part: feature:277150-277245:1:exon
so has part: feature:277511-277741:1:exon
so has part: feature:279806-279828:1:exon
so has part: feature:280161-280276:1:exon
so has part: feature:280943-281672:1:exon

position:281672:1
position: 281672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272440-272525:1:exon

position:272525:1
position: 272525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275277-275756:1:exon

position:275277:1
position: 275277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275756:1
position: 275756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277150-277245:1:exon

position:277150:1
position: 277150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277245:1
position: 277245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277511-277741:1:exon

position:277511:1
position: 277511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277741:1
position: 277741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279806-279828:1:exon

position:279806:1
position: 279806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279828:1
position: 279828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280161-280276:1:exon

position:280161:1
position: 280161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280276:1
position: 280276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280943-281672:1:exon

position:280943:1
position: 280943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321539
product: E3 ubiquitin-protein ligase TRIM39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015878538.2
SIO_010081: LOC107321539
subclass of: SO_0000673
so part of: LOC107321539
location: join(275032..275756,277150..277245,277511..277741,279806..279828,280161..280276,280943..284361)
location: region:275032-284361:1
so has part: feature:275032-275756:1:exon
so has part: feature:277150-277245:1:exon
so has part: feature:277511-277741:1:exon
so has part: feature:279806-279828:1:exon
so has part: feature:280161-280276:1:exon
so has part: feature:280943-284361:1:exon

position:275032:1
position: 275032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275032-275756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277150-277245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277511-277741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279806-279828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280161-280276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280943-284361:1:exon

LOC107321539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39
translation: MDEDNPAESFQDEASCSLCLGFFQDPVSIHCGHNFCRACITRCWEKEEETFPCPRCKATATQRNLRPNRELAKIIEIAKRLSLRAPNAGERMCERHQEVLKLFCEEDQEPICLVCRESHAHRLHAAVPIEEAAEEQKEKIQAHVQILKEKKEKLRGLKEAEEGKSLEFLEKVQEERQKVMMDIKELQQFVEQQERILLGRLEKLDQEIMRRKEEKVAKLLEGISSISEQICELEEKCQQPPCEFLQGSRNILSRLENEESQKDKEVLPEGEENPTSPTQIHTTLKETLMQFRESLTLDPDTAHPRLVLSEDQKRVRWEEARNPVPDNPKRFDSSRCVLGCQGFNAGRHYWEVEVGDGEAWAVGVAKESVERKGRISVKPEVGIWAVGQCGAQYQALTSPTSPIELLSAPKVIGIYLDYEAGRVAFFDANKEVPIFAYPPTSFGGERVLPLLCLGRGCCFTLSP
SIO_010081: LOC107321539
subclass of: SO_0000673
so part of: LOC107321539
location: join(275346..275756,277150..277245,277511..277741,279806..279828,280161..280276,280943..281457)
location: region:275346-281457:1
so has part: feature:275346-275756:1:exon
so has part: feature:277150-277245:1:exon
so has part: feature:277511-277741:1:exon
so has part: feature:279806-279828:1:exon
so has part: feature:280161-280276:1:exon
so has part: feature:280943-281457:1:exon

XP_015734024.1
type: Protein
SIO_000068: ncbiprotein

position:275346:1
position: 275346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281457:1
position: 281457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275346-275756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277150-277245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277511-277741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279806-279828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280161-280276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280943-281457:1:exon

LOC107321539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39
translation: MDEDNPAESFQDEASCSLCLGFFQDPVSIHCGHNFCRACITRCWEKEEETFPCPRCKATATQRNLRPNRELAKIIEIAKRLSLRAPNAGERMCERHQEVLKLFCEEDQEPICLVCRESHAHRLHAAVPIEEAAEEQKEKIQAHVQILKEKKEKLRGLKEAEEGKSLEFLEKVQEERQKVMMDIKELQQFVEQQERILLGRLEKLDQEIMRRKEEKVAKLLEGISSISEQICELEEKCQQPPCEFLQGSRNILSRLENEESQKDKEVLPEGEENPTSPTQIHTTLKETLMQFRESLTLDPDTAHPRLVLSEDQKRVRWEEARNPVPDNPKRFDSSRCVLGCQGFNAGRHYWEVEVGDGEAWAVGVAKESVERKGRISVKPEVGIWAVGQCGAQYQALTSPTSPIELLSAPKVIGIYLDYEAGRVAFFDANKEVPIFAYPPTSFGGERVLPLLCLGRGCCFTLSP
SIO_010081: LOC107321539
subclass of: SO_0000673
so part of: LOC107321539
location: join(275346..275756,277150..277245,277511..277741,279806..279828,280161..280276,280943..281457)
location: region:275346-281457:1
so has part: feature:275346-275756:1:exon
so has part: feature:277150-277245:1:exon
so has part: feature:277511-277741:1:exon
so has part: feature:279806-279828:1:exon
so has part: feature:280161-280276:1:exon
so has part: feature:280943-281457:1:exon

XP_015734025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275346-275756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277150-277245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277511-277741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279806-279828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280161-280276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280943-281457:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 283381..283452
location: region:283381-283452:1
so has part: feature:283381-283452:1:exon
subclass of: SO_0000663

116654172
type: Gene
SIO_000068: ncbigene

position:283381:1
position: 283381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283452:1
position: 283452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283381-283452:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:283414..283416,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 283381..283452
location: region:283381-283452:1
so has part: feature:283381-283452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283381-283452:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(283671..283743)
location: region:283671-283743:-1
so has part: feature:283671-283743:-1:exon
subclass of: SO_0000663

116654167
type: Gene
SIO_000068: ncbigene

position:283671:-1
position: 283671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283743:-1
position: 283743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283671-283743:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(283708..283710),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(283671..283743)
location: region:283671-283743:-1
so has part: feature:283671-283743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283671-283743:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 284031..284103
location: region:284031-284103:1
so has part: feature:284031-284103:1:exon
subclass of: SO_0000663

116654173
type: Gene
SIO_000068: ncbigene

position:284031:1
position: 284031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284103:1
position: 284103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284031-284103:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:284064..284066,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 284031..284103
location: region:284031-284103:1
so has part: feature:284031-284103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284031-284103:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 284247..284351
location: region:284247-284351:1
so has part: feature:284247-284351:1:exon
subclass of: SO_0000663

116654154
type: Gene
SIO_000068: ncbigene

position:284247:1
position: 284247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284351:1
position: 284351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284247-284351:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:284281..284283,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(284247..284284,284307..284351)
location: region:284247-284351:1
so has part: feature:284247-284284:1:exon
so has part: feature:284307-284351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284247-284284:1:exon

position:284284:1
position: 284284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284307-284351:1:exon

position:284307:1
position: 284307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 284838..284910
location: region:284838-284910:1
so has part: feature:284838-284910:1:exon
subclass of: SO_0000663

116654155
type: Gene
SIO_000068: ncbigene

position:284838:1
position: 284838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284910:1
position: 284910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284838-284910:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:284871..284873,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 284838..284910
location: region:284838-284910:1
so has part: feature:284838-284910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284838-284910:1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(285097..285168)
location: region:285097-285168:-1
so has part: feature:285097-285168:-1:exon
subclass of: SO_0000663

116654168
type: Gene
SIO_000068: ncbigene

position:285097:-1
position: 285097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285168:-1
position: 285168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285097-285168:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(285133..285135),aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(285097..285168)
location: region:285097-285168:-1
so has part: feature:285097-285168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285097-285168:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 285438..285509
location: region:285438-285509:1
so has part: feature:285438-285509:1:exon
subclass of: SO_0000663

116654156
type: Gene
SIO_000068: ncbigene

position:285438:1
position: 285438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285509:1
position: 285509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285438-285509:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:285471..285473,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 285438..285509
location: region:285438-285509:1
so has part: feature:285438-285509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285438-285509:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 285742..285814
location: region:285742-285814:1
so has part: feature:285742-285814:1:exon
subclass of: SO_0000663

116654157
type: Gene
SIO_000068: ncbigene

position:285742:1
position: 285742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285814:1
position: 285814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285742-285814:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:285775..285777,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 285742..285814
location: region:285742-285814:1
so has part: feature:285742-285814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285742-285814:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 286325..286396
location: region:286325-286396:1
so has part: feature:286325-286396:1:exon
subclass of: SO_0000663

116654158
type: Gene
SIO_000068: ncbigene

position:286325:1
position: 286325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286396:1
position: 286396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286325-286396:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:286358..286360,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 286325..286396
location: region:286325-286396:1
so has part: feature:286325-286396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286325-286396:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 286631..286703
location: region:286631-286703:1
so has part: feature:286631-286703:1:exon
subclass of: SO_0000663

116654159
type: Gene
SIO_000068: ncbigene

position:286631:1
position: 286631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286703:1
position: 286703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286631-286703:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:286664..286666,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 286631..286703
location: region:286631-286703:1
so has part: feature:286631-286703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286631-286703:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 292202..292274
location: region:292202-292274:1
so has part: feature:292202-292274:1:exon
subclass of: SO_0000663

116654160
type: Gene
SIO_000068: ncbigene

position:292202:1
position: 292202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292274:1
position: 292274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292202-292274:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:292235..292237,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 292202..292274
location: region:292202-292274:1
so has part: feature:292202-292274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292202-292274:1:exon

LOC107321572
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294412..306830
location: region:294412-306830:1
so has part: feature:294412-306830:1:exon
subclass of: SO_0000010

107321572
type: Gene
SIO_000068: ncbigene

position:294412:1
position: 294412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306830:1
position: 306830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294412-306830:1:exon

LOC107321572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321572
product: E3 ubiquitin-protein ligase TRIM7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015878596.2
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(294412..294561,297416..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,305367..306830)
location: region:294412-306830:1
so has part: feature:294412-294561:1:exon
so has part: feature:297416-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:305367-306830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294412-294561:1:exon

position:294561:1
position: 294561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297416-297842:1:exon

position:297416:1
position: 297416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297842:1
position: 297842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298625-298720:1:exon

position:298625:1
position: 298625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298720:1
position: 298720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299483-299713:1:exon

position:299483:1
position: 299483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299713:1
position: 299713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301055-301077:1:exon

position:301055:1
position: 301055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301077:1
position: 301077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301590-301705:1:exon

position:301590:1
position: 301590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301705:1
position: 301705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:303675-303710:1:exon

position:303675:1
position: 303675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303710:1
position: 303710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305367-306830:1:exon

position:305367:1
position: 305367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321572
product: E3 ubiquitin-protein ligase TRIM7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032447979.1
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(295585..295973,297182..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,303894..303966,305367..305476)
location: region:295585-305476:1
so has part: feature:295585-295973:1:exon
so has part: feature:297182-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:303894-303966:1:exon
so has part: feature:305367-305476:1:exon

position:295585:1
position: 295585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305476:1
position: 305476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295585-295973:1:exon

position:295973:1
position: 295973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297182-297842:1:exon

position:297182:1
position: 297182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298625-298720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299483-299713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301055-301077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301590-301705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303675-303710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303894-303966:1:exon

position:303894:1
position: 303894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303966:1
position: 303966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:305367-305476:1:exon

LOC107321572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321572
product: E3 ubiquitin-protein ligase TRIM7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032447978.1
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(295773..295973,297182..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,305367..306830)
location: region:295773-306830:1
so has part: feature:295773-295973:1:exon
so has part: feature:297182-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:305367-306830:1:exon

position:295773:1
position: 295773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295773-295973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297182-297842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298625-298720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299483-299713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301055-301077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301590-301705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303675-303710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305367-306830:1:exon

LOC107321572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7 isoform X1
translation: MQRAGHYGRTPLSYTSASRWGTETRASFGGAKSRDVSSLPFSPSRVLYPKAEVFITSLRKPDTTAGSFLERERPWGRLPSIHALPPPAPVKSVLTHRREAMAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIAKSWKDLEMDFPCPQCREVFQQKNLRPNRQLANMAEIISQFTLRGAKGAEEDGLCVKHREALKLYCKDDRRSICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLDKMEKSIAKRQNENITDLSKEITLLNKLITEMEEKIQQPVLEFLKDVMGVISRSEEVKCQKPVPVCTDMKMHVCNFSLKTVVLEKVLKRFKENLRDELGRGEKEDLTLDPDSANHLLILSADLKTVRMGCRKQDLPDNPKRFDTNSRVLATTGFKSGRHYWEVEVGASDGWAFGVAKESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLGQKLNKVRVYLDYEGEEVSFYNAENMQHIFTFNVAFREKVFPLFSVCSTVTYIKLCS
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(295918..295973,297182..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,305367..305881)
location: region:295918-305881:1
so has part: feature:295918-295973:1:exon
so has part: feature:297182-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:305367-305881:1:exon

XP_032303869.1
type: Protein
SIO_000068: ncbiprotein

position:295918:1
position: 295918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305881:1
position: 305881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295918-295973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297182-297842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298625-298720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299483-299713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301055-301077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301590-301705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303675-303710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305367-305881:1:exon

LOC107321572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7 isoform X3
translation: MQRAGHYGRTPLSYTSASRWGTETRASFGGAKSRDVSSLPFSPSRVLYPKAEVFITSLRKPDTTAGSFLERERPWGRLPSIHALPPPAPVKSVLTHRREAMAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIAKSWKDLEMDFPCPQCREVFQQKNLRPNRQLANMAEIISQFTLRGAKGAEEDGLCVKHREALKLYCKDDRRSICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLDKMEKSIAKRQNENITDLSKEITLLNKLITEMEEKIQQPVLEFLKDVMGVISRSEEVKCQKPVPVCTDMKMHVCNFSLKTVVLEKVLKRFKENLRDELGRGEKDPACSVQESKADFSS
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(295918..295973,297182..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,303894..303940)
location: region:295918-303940:1
so has part: feature:295918-295973:1:exon
so has part: feature:297182-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:303894-303940:1:exon

XP_032303870.1
type: Protein
SIO_000068: ncbiprotein

position:303940:1
position: 303940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295918-295973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297182-297842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298625-298720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299483-299713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301055-301077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301590-301705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303675-303710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303894-303940:1:exon

LOC107321572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7 isoform X2
translation: MAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIAKSWKDLEMDFPCPQCREVFQQKNLRPNRQLANMAEIISQFTLRGAKGAEEDGLCVKHREALKLYCKDDRRSICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLDKMEKSIAKRQNENITDLSKEITLLNKLITEMEEKIQQPVLEFLKDVMGVISRSEEVKCQKPVPVCTDMKMHVCNFSLKTVVLEKVLKRFKENLRDELGRGEKEDLTLDPDSANHLLILSADLKTVRMGCRKQDLPDNPKRFDTNSRVLATTGFKSGRHYWEVEVGASDGWAFGVAKESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLGQKLNKVRVYLDYEGEEVSFYNAENMQHIFTFNVAFREKVFPLFSVCSTVTYIKLCS
SIO_010081: LOC107321572
subclass of: SO_0000673
so part of: LOC107321572
location: join(297426..297842,298625..298720,299483..299713,301055..301077,301590..301705,303675..303710,305367..305881)
location: region:297426-305881:1
so has part: feature:297426-297842:1:exon
so has part: feature:298625-298720:1:exon
so has part: feature:299483-299713:1:exon
so has part: feature:301055-301077:1:exon
so has part: feature:301590-301705:1:exon
so has part: feature:303675-303710:1:exon
so has part: feature:305367-305881:1:exon

XP_015734082.1
type: Protein
SIO_000068: ncbiprotein

position:297426:1
position: 297426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297426-297842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298625-298720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299483-299713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301055-301077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301590-301705:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303675-303710:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305367-305881:1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 309693..309765
location: region:309693-309765:1
so has part: feature:309693-309765:1:exon
subclass of: SO_0000663

116654161
type: Gene
SIO_000068: ncbigene

position:309693:1
position: 309693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309765:1
position: 309765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309693-309765:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:309726..309728,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 309693..309765
location: region:309693-309765:1
so has part: feature:309693-309765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309693-309765:1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 309912..309983
location: region:309912-309983:1
so has part: feature:309912-309983:1:exon
subclass of: SO_0000663

116654162
type: Gene
SIO_000068: ncbigene

position:309912:1
position: 309912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309983:1
position: 309983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309912-309983:1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:309944..309946,aa:Pro,seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: 309912..309983
location: region:309912-309983:1
so has part: feature:309912-309983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309912-309983:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 310270..310342
location: region:310270-310342:1
so has part: feature:310270-310342:1:exon
subclass of: SO_0000663

116654163
type: Gene
SIO_000068: ncbigene

position:310270:1
position: 310270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310342:1
position: 310342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310270-310342:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:310303..310305,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 310270..310342
location: region:310270-310342:1
so has part: feature:310270-310342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310270-310342:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(310653..310734)
location: region:310653-310734:-1
so has part: feature:310653-310734:-1:exon
subclass of: SO_0000663

116654169
type: Gene
SIO_000068: ncbigene

position:310653:-1
position: 310653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310734:-1
position: 310734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310653-310734:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(310698..310700),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(310653..310734)
location: region:310653-310734:-1
so has part: feature:310653-310734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310653-310734:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 312828..312900
location: region:312828-312900:1
so has part: feature:312828-312900:1:exon
subclass of: SO_0000663

116654165
type: Gene
SIO_000068: ncbigene

position:312828:1
position: 312828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312900:1
position: 312900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312828-312900:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:312861..312863,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 312828..312900
location: region:312828-312900:1
so has part: feature:312828-312900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312828-312900:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 313194..313267
location: region:313194-313267:1
so has part: feature:313194-313267:1:exon
subclass of: SO_0000663

116654166
type: Gene
SIO_000068: ncbigene

position:313194:1
position: 313194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313267:1
position: 313267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313194-313267:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:313228..313230,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 313194..313267
location: region:313194-313267:1
so has part: feature:313194-313267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313194-313267:1:exon

IL4I1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314356..321101)
location: region:314356-321101:-1
so has part: feature:314356-321101:-1:exon
subclass of: SO_0000010

107321571
type: Gene
SIO_000068: ncbigene

position:314356:-1
position: 314356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321101:-1
position: 321101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314356-321101:-1:exon

IL4I1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: IL4I1
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015878593.2
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(314356..315509,315683..315819,316050..316118,316709..316910,317565..317671,318821..319035,321011..321101))
location: region:314356-321101:-1
so has part: feature:321011-321101:-1:exon
so has part: feature:318821-319035:-1:exon
so has part: feature:317565-317671:-1:exon
so has part: feature:316709-316910:-1:exon
so has part: feature:316050-316118:-1:exon
so has part: feature:315683-315819:-1:exon
so has part: feature:314356-315509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321011-321101:-1:exon

position:321011:-1
position: 321011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318821-319035:-1:exon

position:318821:-1
position: 318821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319035:-1
position: 319035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317565-317671:-1:exon

position:317565:-1
position: 317565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317671:-1
position: 317671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316709-316910:-1:exon

position:316709:-1
position: 316709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316910:-1
position: 316910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316050-316118:-1:exon

position:316050:-1
position: 316050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316118:-1
position: 316118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315683-315819:-1:exon

position:315683:-1
position: 315683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315819:-1
position: 315819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:314356-315509:-1:exon

position:315509:-1
position: 315509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL4I1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MAAMALLPVLLLLGLANAKRFSCFPEYCLHDKDYEELLGIVKYGLEPTKNPSNVIIVGAGISGLTAAKLLRDAGHKVTILEISNRVGGRIRTYREKDWYVELGAMRLPSKHRLVREFIRQFDLKLNPFRQTDDNAWYFVNGIRARVADVNRNPDILNYTLRPSERGKSASQLYREALNLAFKQFQTMNCKEYLAKHDSFSTKEYLIKVGNLSRGAVQMIGDLLNEDSGFYLSFLASLWDFDIFSDEESFDEITGGFDQLPKAFHKALPGVIKFNCTVEKIMTKGGKVRVFYRAPDTLAPSIATADYVLVTSSAKATRHIQFFPPLSPTKNEALRSIHYASASKIALACTERFWEKDGIQGGQSITDRPSRFIYYPSHNFSSGIGVILASYTWNDDAEFLMPLEDEKYLDVVLQDLSDIHQVSKSYLQYTCDRYVIQKWQLDRHSLGAFAAFTPYQFTDYSQALFEHEGRVHFAGEHTAQPHAWIDTSMKAAVRAASNIHDDSETRNLNLNLEGLMEKGEL
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(314690..315509,315683..315819,316050..316118,316709..316910,317565..317671,318821..319035,321011..321023))
location: region:314690-321023:-1
so has part: feature:321011-321023:-1:exon
so has part: feature:318821-319035:-1:exon
so has part: feature:317565-317671:-1:exon
so has part: feature:316709-316910:-1:exon
so has part: feature:316050-316118:-1:exon
so has part: feature:315683-315819:-1:exon
so has part: feature:314690-315509:-1:exon

XP_015734079.1
type: Protein
SIO_000068: ncbiprotein

position:314690:-1
position: 314690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321023:-1
position: 321023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321011-321023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318821-319035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317565-317671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316709-316910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316050-316118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315683-315819:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314690-315509:-1:exon

LOC116654149
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116654149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321015..322628
location: region:321015-322628:1
so has part: feature:321015-322628:1:exon
subclass of: SO_0000011

116654149
type: Gene
SIO_000068: ncbigene

position:321015:1
position: 321015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322628:1
position: 322628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321015-322628:1:exon

LOC116654149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116654149
product: uncharacterized LOC116654149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004309090.1
SIO_010081: LOC116654149
subclass of: SO_0000673
so part of: LOC116654149
location: join(321015..321101,322537..322628)
location: region:321015-322628:1
so has part: feature:321015-321101:1:exon
so has part: feature:322537-322628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321015-321101:1:exon

position:321101:1
position: 321101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322537-322628:1:exon

position:322537:1
position: 322537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(329063..329180)
location: region:329063-329180:-1
so has part: feature:329063-329180:-1:exon
subclass of: SO_0000663

116654170
type: Gene
SIO_000068: ncbigene

position:329063:-1
position: 329063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329180:-1
position: 329180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329063-329180:-1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 93934
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(329144..329146),aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: complement(join(329063..329108,329143..329180))
location: region:329063-329180:-1
so has part: feature:329143-329180:-1:exon
so has part: feature:329063-329108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329143-329180:-1:exon

position:329143:-1
position: 329143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329063-329108:-1:exon

position:329108:-1
position: 329108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107321570
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107321570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329774..340694
location: region:329774-340694:1
so has part: feature:329774-340694:1:exon
subclass of: SO_0000010

107321570
type: Gene
SIO_000068: ncbigene

position:329774:1
position: 329774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340694:1
position: 340694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329774-340694:1:exon

LOC107321570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321570
product: zinc finger protein CKR1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032448011.1
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(329774..330368,335821..335921,338193..340694)
location: region:329774-340694:1
so has part: feature:329774-330368:1:exon
so has part: feature:335821-335921:1:exon
so has part: feature:338193-340694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329774-330368:1:exon

position:330368:1
position: 330368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335821-335921:1:exon

position:335821:1
position: 335821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335921:1
position: 335921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338193-340694:1:exon

position:338193:1
position: 338193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107321570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1 isoform X3
translation: MARPTDKQSQEQRKKRRRRRRSPKILRIQCSSSFPRQRWRRPQRGSHKRKPSRRRSQPSQRMSSTARRVMSSFMDNFSRGLVSDADQRRRQRRGSFIGILELRAAVDAMMEGRMGFSLPYRDALLPMEPYMLLYRDVMQESYETLMSIAQGLVNPKGTSKDTMGLKDNAMGSEEPLIHPPHNPTPNPTIGSNRRKAKRPDKAIPIGVTHPPHTSPTPKPNRAKLPHLRARPFGCPDCGKSFPWPSHLERHHRVHTGERPYSCPECGESYSQSSHLLQHRRTHNSDRPYKCQRCGKRFAISSDLMAHNRVHEAQKPHKCGECGKGFVWASHLERHRRVHTGEKPYKCPECGESFSQGSHLSKHQRSHAVERPRYRQNRIGPKPLSCHDYGKALRVNPTLLKPQRCHRKEEKHRCGVCGKGFAWASHLQRHQRVHTGERPFHCGLCGESFTQKAHLLQHGKIHLSERPYKCKERPYKDNGNGLEDSAPFTGRRRCRMDLKSFKCGDCGKGFVWASHLDRHRRVHTGEKPYECPECGESFSQGSHLSKHQRRHSPKENRVGGGEPLSEALLGYGVQRSLDADL
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(330025..330368,335821..335921,338193..339490)
location: region:330025-339490:1
so has part: feature:330025-330368:1:exon
so has part: feature:335821-335921:1:exon
so has part: feature:338193-339490:1:exon

XP_032303902.1
type: Protein
SIO_000068: ncbiprotein

position:330025:1
position: 330025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339490:1
position: 339490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330025-330368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335821-335921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338193-339490:1:exon

LOC107321570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321570
product: zinc finger protein CKR1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015878591.2
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(332896..333097,335784..335921,338193..340694)
location: region:332896-340694:1
so has part: feature:332896-333097:1:exon
so has part: feature:335784-335921:1:exon
so has part: feature:338193-340694:1:exon

position:332896:1
position: 332896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332896-333097:1:exon

position:333097:1
position: 333097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335784-335921:1:exon

position:335784:1
position: 335784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338193-340694:1:exon

LOC107321570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107321570
product: zinc finger protein CKR1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_015878592.2
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(332896..333097,335838..335921,338193..340694)
location: region:332896-340694:1
so has part: feature:332896-333097:1:exon
so has part: feature:335838-335921:1:exon
so has part: feature:338193-340694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332896-333097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335838-335921:1:exon

position:335838:1
position: 335838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338193-340694:1:exon

LOC107321570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1 isoform X1
translation: MDLMAGFSLPYRVFPPYRFSLPYRDALLPMEPYMLLYRDVMQESYETLMSIAQGLVNPKGTSKDTMGLKDNAMGSEEPLIHPPHNPTPNPTIGSNRRKAKRPDKAIPIGVTHPPHTSPTPKPNRAKLPHLRARPFGCPDCGKSFPWPSHLERHHRVHTGERPYSCPECGESYSQSSHLLQHRRTHNSDRPYKCQRCGKRFAISSDLMAHNRVHEAQKPHKCGECGKGFVWASHLERHRRVHTGEKPYKCPECGESFSQGSHLSKHQRSHAVERPRYRQNRIGPKPLSCHDYGKALRVNPTLLKPQRCHRKEEKHRCGVCGKGFAWASHLQRHQRVHTGERPFHCGLCGESFTQKAHLLQHGKIHLSERPYKCKERPYKDNGNGLEDSAPFTGRRRCRMDLKSFKCGDCGKGFVWASHLDRHRRVHTGEKPYECPECGESFSQGSHLSKHQRRHSPKENRVGGGEPLSEALLGYGVQRSLDADL
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(333082..333097,335784..335921,338193..339490)
location: region:333082-339490:1
so has part: feature:333082-333097:1:exon
so has part: feature:335784-335921:1:exon
so has part: feature:338193-339490:1:exon

XP_015734077.1
type: Protein
SIO_000068: ncbiprotein

position:333082:1
position: 333082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333082-333097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335784-335921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338193-339490:1:exon

LOC107321570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107321570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1 isoform X2
translation: MDLMAGDALLPMEPYMLLYRDVMQESYETLMSIAQGLVNPKGTSKDTMGLKDNAMGSEEPLIHPPHNPTPNPTIGSNRRKAKRPDKAIPIGVTHPPHTSPTPKPNRAKLPHLRARPFGCPDCGKSFPWPSHLERHHRVHTGERPYSCPECGESYSQSSHLLQHRRTHNSDRPYKCQRCGKRFAISSDLMAHNRVHEAQKPHKCGECGKGFVWASHLERHRRVHTGEKPYKCPECGESFSQGSHLSKHQRSHAVERPRYRQNRIGPKPLSCHDYGKALRVNPTLLKPQRCHRKEEKHRCGVCGKGFAWASHLQRHQRVHTGERPFHCGLCGESFTQKAHLLQHGKIHLSERPYKCKERPYKDNGNGLEDSAPFTGRRRCRMDLKSFKCGDCGKGFVWASHLDRHRRVHTGEKPYECPECGESFSQGSHLSKHQRRHSPKENRVGGGEPLSEALLGYGVQRSLDADL
SIO_010081: LOC107321570
subclass of: SO_0000673
so part of: LOC107321570
location: join(333082..333097,335838..335921,338193..339490)
location: region:333082-339490:1
so has part: feature:333082-333097:1:exon
so has part: feature:335838-335921:1:exon
so has part: feature:338193-339490:1:exon

XP_015734078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333082-333097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335838-335921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338193-339490:1:exon