Trichosurus vulpecula mitochondrion, complete genome.
type: Entry
definition: Trichosurus vulpecula mitochondrion, complete genome.
sequence version: NC_003039.1
sequence date: 2023-04-03
sequence: sequence
division: MAM
label: NC_003039.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Trichosurus vulpecula (common brushtail)
organism: Trichosurus vulpecula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phalangeridae; Trichosurus.
reference: 1
references: 11454299
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AF357238.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 17191
topology: circular
so has quality: SO_0000988
location: 1..17191
location: region:1-17191:1
RO_0002162: 9337

NC_003039
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Mitochondrial genomes of a bandicoot and a brushtail possum confirm the monophyly of australidelphian marsupials
author: Phillips, M.J.
author: Lin, Y.H.
author: Harrison, G.L.
author: Penny, D.
journal: Proc. R. Soc. Lond., B, Biol. Sci.
volume: 268
issue: 1475
pages: 1533-1538
year: 2001
pubmed: 11454299

11454299
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (02-AUG-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Lin, Y.-H.
author: Phillips, M.J.
journal: Submitted (07-MAR-2001) Institute of Molecular BioSciences, Massey University, Palmerston North, New Zealand

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17191:1
position: 17191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17191:1:source
so part of: sequence
organism: Trichosurus vulpecula
organelle: mitochondrion
mol type: genomic DNA

9337
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Phe
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9337
product: 12S ribosomal RNA
so part of: sequence
location: 70..1015
location: region:70-1015:1
so has part: feature:70-1015:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015:1
position: 1015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1015:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Val
so part of: sequence
location: 1017..1085
location: region:1017-1085:1
so has part: feature:1017-1085:1:region

position:1017:1
position: 1017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085:1
position: 1085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017-1085:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9337
product: 16S ribosomal RNA
so part of: sequence
location: 1086..2650
location: region:1086-2650:1
so has part: feature:1086-2650:1:region

position:1086:1
position: 1086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650:1
position: 2650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086-2650:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2650..2723
location: region:2650-2723:1
so has part: feature:2650-2723:1:region

position:2723:1
position: 2723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650-2723:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND1
so part of: sequence
location: 2725..3680
location: region:2725-3680:1
so has part: feature:2725-3680:1:exon
subclass of: SO_0000010

803525
type: Gene
SIO_000068: ncbigene

position:2725:1
position: 2725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3680:1
position: 3680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2725-3680:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3679..3680,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MFIINLLLYIIPILLAVAFLTLVERKALGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLAFTIWTPLPMPHSLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIMTTWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTTILFLGSSINHNFTHLNTLSFVIKTALLTFMFLWVRASYPRFRYDQLMYLLWKNFLPLTLAFCLWFISIPVALSCIPPQI
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2725..3680
location: region:2725-3680:1
so has part: feature:2725-3680:1:exon

NP_149931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2725-3680:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Ile
so part of: sequence
location: 3681..3749
location: region:3681-3749:1
so has part: feature:3681-3749:1:region

position:3681:1
position: 3681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749:1
position: 3749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3681-3749:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Gln
so part of: sequence
location: complement(3747..3817)
location: region:3747-3817:-1
so has part: feature:3747-3817:-1:region

position:3747:-1
position: 3747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3817:-1
position: 3817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3747-3817:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Met
so part of: sequence
location: 3817..3885
location: region:3817-3885:1
so has part: feature:3817-3885:1:region

position:3817:1
position: 3817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3885:1
position: 3885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817-3885:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND2
so part of: sequence
location: 3886..4929
location: region:3886-4929:1
so has part: feature:3886-4929:1:exon
subclass of: SO_0000010

803527
type: Gene
SIO_000068: ncbigene

position:3886:1
position: 3886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4929:1
position: 4929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3886-4929:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPYVLLIISISLLLGTSLTLLSNHWLVAWMGLEINTLAIIPMMTYPNHPRATESAIKYFLTQSTASMMLMFAIINNAWMTNQWTLSQISDQTSSITMTLALAIKLGLAPFHFWVPEVTQGIPLTSGMLLLTWQKIAPMSLMYQISPSLNMKILTILAFSSTLLGGWGGLNQTHLRKILAYSSIAHMGWMTIIILINPTLMLLNLIIYIAATLTLFLALNHSSITKIKSLANLWNKSTPMTIVILLTLLSLGGLPPLTGFMPKWLILQELVKHNNIPMAMLMALSALLNLFFYMRIIYVSTLTMPPSTNNSKLQWPYQQTKTINIIPSLTIISSLLLPLTPMFITLS
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3886..4929
location: region:3886-4929:1
so has part: feature:3886-4929:1:exon

NP_149932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3886-4929:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Ala
so part of: sequence
location: complement(4931..4999)
location: region:4931-4999:-1
so has part: feature:4931-4999:-1:region

position:4931:-1
position: 4931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999:-1
position: 4999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4931-4999:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Cys
so part of: sequence
location: complement(5005..5070)
location: region:5005-5070:-1
so has part: feature:5005-5070:-1:region

position:5005:-1
position: 5005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5070:-1
position: 5070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5005-5070:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Trp
so part of: sequence
location: 5076..5145
location: region:5076-5145:1
so has part: feature:5076-5145:1:region

position:5076:1
position: 5076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5145:1
position: 5145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076-5145:1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 9337
note: origin of L-strand replication
so part of: sequence
location: 5146..5223
location: region:5146-5223:1
so has part: feature:5146-5223:1:region

position:5146:1
position: 5146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5223:1
position: 5223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5146-5223:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Asn
so part of: sequence
location: complement(5224..5295)
location: region:5224-5295:-1
so has part: feature:5224-5295:-1:region

position:5224:-1
position: 5224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5295:-1
position: 5295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224-5295:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Tyr
so part of: sequence
location: complement(5297..5364)
location: region:5297-5364:-1
so has part: feature:5297-5364:-1:region

position:5297:-1
position: 5297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5364:-1
position: 5364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5297-5364:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: COX1
so part of: sequence
location: 5366..6913
location: region:5366-6913:1
so has part: feature:5366-6913:1:exon
subclass of: SO_0000010

803526
type: Gene
SIO_000068: ncbigene

position:5366:1
position: 5366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6913:1
position: 6913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5366-6913:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFITRWLFSTNHKDIGTLYLIFGAWAGMTGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSAVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVISSIGSFISLTAVILMVFTIWEAFASKREVASVELTTTNLEWLYGCPPPYHTFEQPVFVKSQL
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5366..6913
location: region:5366-6913:1
so has part: feature:5366-6913:1:exon

NP_149933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5366-6913:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(6911..6979)
location: region:6911-6979:-1
so has part: feature:6911-6979:-1:region

position:6911:-1
position: 6911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6979:-1
position: 6979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6911-6979:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Asp
so part of: sequence
location: 6982..7051
location: region:6982-7051:1
so has part: feature:6982-7051:1:region

position:6982:1
position: 6982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7051:1
position: 7051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6982-7051:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: COX2
so part of: sequence
location: 7053..7734
location: region:7053-7734:1
so has part: feature:7053-7734:1:exon
subclass of: SO_0000010

803535
type: Gene
SIO_000068: ncbigene

position:7053:1
position: 7053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7734:1
position: 7734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7053-7734:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7734,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTIMPAAILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLMFDSYMVPTQDLAPGQFRLLEVDNRMVLPMELPIRMLISSEDVLHAWTVPSLGLKADAIPGRLNQATLTSTRPGVFYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7053..7734
location: region:7053-7734:1
so has part: feature:7053-7734:1:exon

NP_149934.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7053-7734:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Lys
so part of: sequence
location: 7735..7795
location: region:7735-7795:1
so has part: feature:7735-7795:1:region

position:7735:1
position: 7735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7795:1
position: 7795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7735-7795:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ATP8
so part of: sequence
location: 7796..8005
location: region:7796-8005:1
so has part: feature:7796-8005:1:exon
subclass of: SO_0000010

803534
type: Gene
SIO_000068: ncbigene

position:7796:1
position: 7796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8005:1
position: 8005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7796-8005:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWFLTISLMIISLFCVYQTKMINQTMISITQQNKKDITSQTQLHWEKKWTKIYLPHSSPLLS
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7796..8005
location: region:7796-8005:1
so has part: feature:7796-8005:1:exon

NP_149935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7796-8005:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ATP6
so part of: sequence
location: 7960..8640
location: region:7960-8640:1
so has part: feature:7960-8640:1:exon
subclass of: SO_0000010

803537
type: Gene
SIO_000068: ncbigene

position:7960:1
position: 7960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8640:1
position: 8640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7960-8640:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFATFITPTIMGITTLPIIMLFPCLILTTPKRWLPNRIQTLQIWLIRLITKQMMTMHNKQGRTWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLGTVIMGFRNKPKTSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSSINMTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNS
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7960..8640
location: region:7960-8640:1
so has part: feature:7960-8640:1:exon

NP_149936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7960-8640:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: COX3
so part of: sequence
location: 8640..9423
location: region:8640-9423:1
so has part: feature:8640-9423:1:exon
subclass of: SO_0000010

803530
type: Gene
SIO_000068: ncbigene

position:9423:1
position: 9423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8640-9423:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9423,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSLLALIGLTCMLLTMYQWWRDIIREGTFQGHHTPAVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTILQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8640..9423
location: region:8640-9423:1
so has part: feature:8640-9423:1:exon

NP_149937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8640-9423:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Gly
so part of: sequence
location: 9424..9491
location: region:9424-9491:1
so has part: feature:9424-9491:1:region

position:9424:1
position: 9424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9491:1
position: 9491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9424-9491:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND3
so part of: sequence
location: 9492..9837
location: region:9492-9837:1
so has part: feature:9492-9837:1:exon
subclass of: SO_0000010

803532
type: Gene
SIO_000068: ncbigene

position:9492:1
position: 9492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9837:1
position: 9837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9492-9837:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9837,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIITLIINTTLSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLSEPNTMLILAYCLILLLTAGLAYEWLQKGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9492..9837
location: region:9492-9837:1
so has part: feature:9492-9837:1:exon

NP_149938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9492-9837:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Arg
so part of: sequence
location: 9838..9906
location: region:9838-9906:1
so has part: feature:9838-9906:1:region

position:9838:1
position: 9838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9906:1
position: 9906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9838-9906:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND4L
so part of: sequence
location: 9907..10203
location: region:9907-10203:1
so has part: feature:9907-10203:1:exon
subclass of: SO_0000010

803528
type: Gene
SIO_000068: ncbigene

position:9907:1
position: 9907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10203:1
position: 10203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9907-10203:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTSINLNLTVAFSLALAGVLIYRSHLMSTLLCLEGMMLSLFVMMALLISHFHMFSTSMAPIILLVFSACEAGVGLALLVKTSNNYGNDYVQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9907..10203
location: region:9907-10203:1
so has part: feature:9907-10203:1:exon

NP_149939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9907-10203:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND4
so part of: sequence
location: 10197..11574
location: region:10197-11574:1
so has part: feature:10197-11574:1:exon
subclass of: SO_0000010

803531
type: Gene
SIO_000068: ncbigene

position:10197:1
position: 10197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11574:1
position: 11574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10197-11574:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11574,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILGITY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10197..11574
location: region:10197-11574:1
so has part: feature:10197-11574:1:exon

NP_149940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10197-11574:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-His
so part of: sequence
location: 11575..11643
location: region:11575-11643:1
so has part: feature:11575-11643:1:region

position:11575:1
position: 11575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11643:1
position: 11643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11575-11643:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11644..11702
location: region:11644-11702:1
so has part: feature:11644-11702:1:region

position:11644:1
position: 11644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11702:1
position: 11702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11644-11702:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11702..11772
location: region:11702-11772:1
so has part: feature:11702-11772:1:region

position:11772:1
position: 11772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11702-11772:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND5
so part of: sequence
location: 11773..13581
location: region:11773-13581:1
so has part: feature:11773-13581:1:exon
subclass of: SO_0000010

803529
type: Gene
SIO_000068: ncbigene

position:11773:1
position: 11773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13581:1
position: 13581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11773-13581:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNFMLNTTILLSITMLTFPLIYNLIFPNKTNQFPLYCKNAVKTAFFISLPSLLMFMNMGHESTITNWQWFSMGSFNISMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPYIHQFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFMLSMAWLMTNNNSWDLQHIFMTNMDTLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLENNTTILTIALCLGAMTTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLTLLPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSYTNTWALTLTLIATMLTAMYSMRIIFFALLNQPRFLPLSPINENNPNLTNPIMRLAMGSIFAGFTLTTNIPPTSIITMTMPPTTKMSALMVTILGLLIAMELNSSTNKLPTMPFIHTHNFSNMLGYFTFLFHRLYPLANLQLGQHIATMLIDLNWYEKTGPKGQANLHSNLSSSITSTHKGLIKTYFLSFIISITMIMLII
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11773..13581
location: region:11773-13581:1
so has part: feature:11773-13581:1:exon

NP_149941.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11773-13581:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: ND6
so part of: sequence
location: complement(13578..14081)
location: region:13578-14081:-1
so has part: feature:13578-14081:-1:exon
subclass of: SO_0000010

803533
type: Gene
SIO_000068: ncbigene

position:13578:-1
position: 13578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14081:-1
position: 14081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13578-14081:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MEMMVVFLFSVLFIFGFVAFASKPSPIYGGLSLVVSGGLGSAIVVSLENTFLGLVVFLVYLGGMLVVFGYTSAMATEEYPESWVGNMVAFSMLLFTLFVELVWYFMSGEVEVDTAVELFDTVGVYCVGQDSSGVSLLYGCGGWILVLLGWVLFITIYIVLEIVRGRD
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13578..14081)
location: region:13578-14081:-1
so has part: feature:13578-14081:-1:exon

NP_149942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13578-14081:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Glu
so part of: sequence
location: complement(14082..14150)
location: region:14082-14150:-1
so has part: feature:14082-14150:-1:region

position:14082:-1
position: 14082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14150:-1
position: 14150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14150:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9337
gene: CYTB
so part of: sequence
location: 14153..15298
location: region:14153-15298:1
so has part: feature:14153-15298:1:exon
subclass of: SO_0000010

803536
type: Gene
SIO_000068: ncbigene

position:14153:1
position: 14153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15298:1
position: 15298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14153-15298:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9337
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MFNLRKTHPIMKIINHSFIDLPAPSNISAWWNFGSLLGICLTMQILTGLFLAMHYTADTATAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHIGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGLMLMLLTLLLLTLFSPDMLSDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLAMPLLHTSNQRSMMFRPISQTLFWILTANLLILTWIGGQPVEEPYIIIGQVASISYFLLIIVLMPMAGLFENFMLKPKW
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14153..15298
location: region:14153-15298:1
so has part: feature:14153-15298:1:exon

NP_149943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14153-15298:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Thr
so part of: sequence
location: 15299..15366
location: region:15299-15366:1
so has part: feature:15299-15366:1:region

position:15299:1
position: 15299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15366:1
position: 15366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15299-15366:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9337
product: tRNA-Pro
so part of: sequence
location: complement(15369..15436)
location: region:15369-15436:-1
so has part: feature:15369-15436:-1:region

position:15369:-1
position: 15369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15436:-1
position: 15436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15369-15436:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 9337
note: control region
so part of: sequence
location: 15438..17191
location: region:15438-17191:1
so has part: feature:15438-17191:1:region

position:15438:1
position: 15438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15438-17191:1:region