Corvus cornix cornix isolate S_Up_H32 chromosome 4A, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 4A, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_047058.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_047058.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022409.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20451253
topology: linear
so has quality: SO_0000987
location: 1..20451253
location: region:1-20451253:1
RO_0002162: 932674

NC_047058
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20451253:1
position: 20451253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20451253:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 4A
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

LOC109145032
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 48205..50735
location: region:48205-50735:1
so has part: feature:48205-50735:1:exon
subclass of: SO_0000011

109145032
type: Gene
SIO_000068: ncbigene

position:48205:1
position: 48205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50735:1
position: 50735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48205-50735:1:exon

LOC109145032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145032
product: uncharacterized LOC109145032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005604716.1
SIO_010081: LOC109145032
subclass of: SO_0000673
so part of: LOC109145032
location: join(48205..48726,49986..50735)
location: region:48205-50735:1
so has part: feature:48205-48726:1:exon
so has part: feature:49986-50735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48205-48726:1:exon

position:48726:1
position: 48726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49986-50735:1:exon

position:49986:1
position: 49986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK26
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: STK26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63818..101033
location: region:63818-101033:1
so has part: feature:63818-101033:1:exon
subclass of: SO_0000010

104691249
type: Gene
SIO_000068: ncbigene

position:63818:1
position: 63818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101033:1
position: 101033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63818-101033:1:exon

STK26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: STK26
product: serine/threonine kinase 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 62 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039572268.1
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(63818..64073,64271..64395,79045..79275,91694..91750,93422..93530,93622..93779,96238..96423,97077..97225,97865..97958,98436..98498,98589..98725,99133..101033)
location: region:63818-101033:1
so has part: feature:63818-64073:1:exon
so has part: feature:64271-64395:1:exon
so has part: feature:79045-79275:1:exon
so has part: feature:91694-91750:1:exon
so has part: feature:93422-93530:1:exon
so has part: feature:93622-93779:1:exon
so has part: feature:96238-96423:1:exon
so has part: feature:97077-97225:1:exon
so has part: feature:97865-97958:1:exon
so has part: feature:98436-98498:1:exon
so has part: feature:98589-98725:1:exon
so has part: feature:99133-101033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63818-64073:1:exon

position:64073:1
position: 64073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64271-64395:1:exon

position:64271:1
position: 64271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64395:1
position: 64395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79045-79275:1:exon

position:79045:1
position: 79045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79275:1
position: 79275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91694-91750:1:exon

position:91694:1
position: 91694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91750:1
position: 91750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:93422-93530:1:exon

position:93422:1
position: 93422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93530:1
position: 93530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93622-93779:1:exon

position:93622:1
position: 93622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93779:1
position: 93779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:96238-96423:1:exon

position:96238:1
position: 96238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96423:1
position: 96423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:97077-97225:1:exon

position:97077:1
position: 97077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97225:1
position: 97225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:97865-97958:1:exon

position:97865:1
position: 97865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97958:1
position: 97958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:98436-98498:1:exon

position:98436:1
position: 98436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98498:1
position: 98498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98589-98725:1:exon

position:98589:1
position: 98589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98725:1
position: 98725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:99133-101033:1:exon

position:99133:1
position: 99133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: STK26
product: serine/threonine kinase 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 62 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039572267.1
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(63905..64165,64271..64395,79045..79275,91694..91750,93422..93530,93622..93779,96238..96423,97077..97225,97865..97958,98436..98498,98589..98725,99133..101033)
location: region:63905-101033:1
so has part: feature:63905-64165:1:exon
so has part: feature:64271-64395:1:exon
so has part: feature:79045-79275:1:exon
so has part: feature:91694-91750:1:exon
so has part: feature:93422-93530:1:exon
so has part: feature:93622-93779:1:exon
so has part: feature:96238-96423:1:exon
so has part: feature:97077-97225:1:exon
so has part: feature:97865-97958:1:exon
so has part: feature:98436-98498:1:exon
so has part: feature:98589-98725:1:exon
so has part: feature:99133-101033:1:exon

position:63905:1
position: 63905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63905-64165:1:exon

position:64165:1
position: 64165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64271-64395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79045-79275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91694-91750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93422-93530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93622-93779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96238-96423:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97077-97225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97865-97958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98436-98498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98589-98725:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99133-101033:1:exon

STK26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: STK26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 26 isoform X2
translation: MGPAAAAAQEKEAEIGEQRAAPARPPQPAMAHSPVAVQVPGMQNHRADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLLGDFSKPFKEFIDACLNKDPTFRPTAKELLKHKFIMKNAKKTSYLTELIDRFKRWKAEGHSSDESDSDGSDSESSNKENNSHPEWSFTTVRKKPDAKKLQNGTDQDLVKTLSCLTMIITPVFAELKQQDTNNANRKKAIEELEKSINVAEATCPGITDKMVKKLMEKFQKFSVNDSS
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(64070..64073,64271..64395,79045..79275,91694..91750,93422..93530,93622..93779,96238..96423,97077..97225,97865..97958,98436..98498,98589..98725,99133..99157)
location: region:64070-99157:1
so has part: feature:64070-64073:1:exon
so has part: feature:64271-64395:1:exon
so has part: feature:79045-79275:1:exon
so has part: feature:91694-91750:1:exon
so has part: feature:93422-93530:1:exon
so has part: feature:93622-93779:1:exon
so has part: feature:96238-96423:1:exon
so has part: feature:97077-97225:1:exon
so has part: feature:97865-97958:1:exon
so has part: feature:98436-98498:1:exon
so has part: feature:98589-98725:1:exon
so has part: feature:99133-99157:1:exon

XP_039428202.1
type: Protein
SIO_000068: ncbiprotein

position:64070:1
position: 64070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99157:1
position: 99157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64070-64073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64271-64395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79045-79275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91694-91750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93422-93530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93622-93779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96238-96423:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97077-97225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97865-97958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98436-98498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98589-98725:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99133-99157:1:exon

STK26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: STK26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 26 isoform X1
translation: MAHSPVAVQVPGMQNHRADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLLGDFSKPFKEFIDACLNKDPTFRPTAKELLKHKFIMKNAKKTSYLTELIDRFKRWKAEGHSSDESDSDGSDSESSNKENNSHPEWSFTTVRKKPDAKKLQNGTDQDLVKTLSCLTMIITPVFAELKQQDTNNANRKKAIEELEKSINVAEATCPGITDKMVKKLMEKFQKFSVNDSS
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(64354..64395,79045..79275,91694..91750,93422..93530,93622..93779,96238..96423,97077..97225,97865..97958,98436..98498,98589..98725,99133..99157)
location: region:64354-99157:1
so has part: feature:64354-64395:1:exon
so has part: feature:79045-79275:1:exon
so has part: feature:91694-91750:1:exon
so has part: feature:93422-93530:1:exon
so has part: feature:93622-93779:1:exon
so has part: feature:96238-96423:1:exon
so has part: feature:97077-97225:1:exon
so has part: feature:97865-97958:1:exon
so has part: feature:98436-98498:1:exon
so has part: feature:98589-98725:1:exon
so has part: feature:99133-99157:1:exon

XP_039428201.1
type: Protein
SIO_000068: ncbiprotein

position:64354:1
position: 64354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64354-64395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79045-79275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91694-91750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93422-93530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93622-93779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96238-96423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97077-97225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97865-97958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98436-98498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98589-98725:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99133-99157:1:exon

FRMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103754..119094)
location: region:103754-119094:-1
so has part: feature:103754-119094:-1:exon
subclass of: SO_0000010

104691250
type: Gene
SIO_000068: ncbigene

position:103754:-1
position: 103754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119094:-1
position: 119094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103754-119094:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019287748.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(103754..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109752,111009..111051,111399..111503,115485..119094))
location: region:103754-119094:-1
so has part: feature:115485-119094:-1:exon
so has part: feature:111399-111503:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109752:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:103754-106061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115485-119094:-1:exon

position:115485:-1
position: 115485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111399-111503:-1:exon

position:111399:-1
position: 111399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111503:-1
position: 111503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111009-111051:-1:exon

position:111009:-1
position: 111009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111051:-1
position: 111051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109719-109752:-1:exon

position:109719:-1
position: 109719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109752:-1
position: 109752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108965-109062:-1:exon

position:108965:-1
position: 108965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109062:-1
position: 109062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108722-108836:-1:exon

position:108722:-1
position: 108722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108836:-1
position: 108836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108381-108528:-1:exon

position:108381:-1
position: 108381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108528:-1
position: 108528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107143-107238:-1:exon

position:107143:-1
position: 107143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107238:-1
position: 107238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106694-106857:-1:exon

position:106694:-1
position: 106694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106857:-1
position: 106857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:106400-106468:-1:exon

position:106400:-1
position: 106400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106468:-1
position: 106468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106228-106303:-1:exon

position:106228:-1
position: 106228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106303:-1
position: 106303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103754-106061:-1:exon

position:106061:-1
position: 106061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010402669.2
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(103754..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..111503,115485..119094))
location: region:103754-119094:-1
so has part: feature:115485-119094:-1:exon
so has part: feature:111399-111503:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:103754-106061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115485-119094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111399-111503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109719-109797:-1:exon

position:109797:-1
position: 109797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103754-106061:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019287745.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(103754..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109752,111009..111051,111399..115474))
location: region:103754-115474:-1
so has part: feature:111399-115474:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109752:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:103754-106061:-1:exon

position:115474:-1
position: 115474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111399-115474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103754-106061:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019287747.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(103754..106061,106228..106303,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..115474))
location: region:103754-115474:-1
so has part: feature:111399-115474:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:103754-106061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111399-115474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103754-106061:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019287744.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(103754..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..115474))
location: region:103754-115474:-1
so has part: feature:111399-115474:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:103754-106061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111399-115474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103754-106061:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X5
translation: MLHLKVQFLDDSQKIFVVDQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKMDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYSGRTQRQLLEHGRKAKIKSLPFERKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPGETQAGQFHCEAIGTAMGTSMMGKNRSLAHSFDYSLQEQPPKRSWSQSDMKTICFTYGSEFRPLGPCPALSSRKGGVYWHVPAQQGLAPRPRHSTERYLGSSTESSDSDSDLLATDYCSLYGRVLRSPMARVRLSSGSLQLDEEDEEVSFATSTAEERVSRGASKYFT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105027..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109752,111009..111051,111399..111503,115485..115541))
location: region:105027-115541:-1
so has part: feature:115485-115541:-1:exon
so has part: feature:111399-111503:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109752:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105027-106061:-1:exon

XP_019143293.1
type: Protein
SIO_000068: ncbiprotein

position:105027:-1
position: 105027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115541:-1
position: 115541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115485-115541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111399-111503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109719-109752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105027-106061:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X3
translation: MLHLKVQFLDDSQKIFVVDQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKNPKEVLFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYSGRTQRQLLEHGRKAKIKSLPFERKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPGETQAGQFHCEAIGTAMGTSMMGKNRSLAHSFDYSLQEQPPKRSWSQSDMKTICFTYGSEFRPLGPCPALSSRKGGVYWHVPAQQGLAPRPRHSTERYLGSSTESSDSDSDLLATDYCSLYGRVLRSPMARVRLSSGSLQLDEEDEEVSFATSTAEERVSRGASKYFT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105027..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..111503,115485..115541))
location: region:105027-115541:-1
so has part: feature:115485-115541:-1:exon
so has part: feature:111399-111503:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105027-106061:-1:exon

XP_010400971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115485-115541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111399-111503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105027-106061:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X2
translation: MVRKGVEGRELKLLPVSLKSHHGCYQHCLTCCFCAVFVCQQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKMDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYSGRTQRQLLEHGRKAKIKSLPFERKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPGETQAGQFHCEAIGTAMGTSMMGKNRSLAHSFDYSLQEQPPKRSWSQSDMKTICFTYGSEFRPLGPCPALSSRKGGVYWHVPAQQGLAPRPRHSTERYLGSSTESSDSDSDLLATDYCSLYGRVLRSPMARVRLSSGSLQLDEEDEEVSFATSTAEERVSRGASKYFT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105027..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109752,111009..111051,111399..111623))
location: region:105027-111623:-1
so has part: feature:111399-111623:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109752:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105027-106061:-1:exon

XP_019143290.1
type: Protein
SIO_000068: ncbiprotein

position:111623:-1
position: 111623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111399-111623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105027-106061:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X4
translation: MVRKGVEGRELKLLPVSLKSHHGCYQHCLTCCFCAVFVCQQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKNPKEVLFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYRKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPGETQAGQFHCEAIGTAMGTSMMGKNRSLAHSFDYSLQEQPPKRSWSQSDMKTICFTYGSEFRPLGPCPALSSRKGGVYWHVPAQQGLAPRPRHSTERYLGSSTESSDSDSDLLATDYCSLYGRVLRSPMARVRLSSGSLQLDEEDEEVSFATSTAEERVSRGASKYFT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105027..106061,106228..106303,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..111623))
location: region:105027-111623:-1
so has part: feature:111399-111623:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105027-106061:-1:exon

XP_019143292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111399-111623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105027-106061:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X1
translation: MVRKGVEGRELKLLPVSLKSHHGCYQHCLTCCFCAVFVCQQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKNPKEVLFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYSGRTQRQLLEHGRKAKIKSLPFERKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPGETQAGQFHCEAIGTAMGTSMMGKNRSLAHSFDYSLQEQPPKRSWSQSDMKTICFTYGSEFRPLGPCPALSSRKGGVYWHVPAQQGLAPRPRHSTERYLGSSTESSDSDSDLLATDYCSLYGRVLRSPMARVRLSSGSLQLDEEDEEVSFATSTAEERVSRGASKYFT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105027..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..111623))
location: region:105027-111623:-1
so has part: feature:111399-111623:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105027-106061:-1:exon

XP_019143289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111399-111623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105027-106061:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FRMD7
product: FERM domain containing 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019287749.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105285..105429,105533..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..115474))
location: region:105285-115474:-1
so has part: feature:111399-115474:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105533-106061:-1:exon
so has part: feature:105285-105429:-1:exon

position:105285:-1
position: 105285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111399-115474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105533-106061:-1:exon

position:105533:-1
position: 105533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:105285-105429:-1:exon

position:105429:-1
position: 105429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X6
translation: MVRKGVEGRELKLLPVSLKSHHGCYQHCLTCCFCAVFVCQQKSCGKALFNLTCSHLNLAEREYFGLEFHSQAGNQVWLEPLKPITKQVKNPKEVLFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLAQGRLPCSDKSTALIISHLLQSEVGDFHEETDQQHLATHRYLPNQEYLDKKIMHYHRRHRGKTPAESDIQLLDVARKLEMYGIRPHPASDGEGTQINLAVTHMGVLVLQGNTKINTFNWSKIRKLSFKRKHFLIKLHANISALCKDTLEFTMASRDTCKAFWKTCVEYHAFFRLSEEPKSKPKALLCSKGSSFRYSGRTQRQLLEHGRKAKIKSLPFERKHCTSRYDERQCRSSPDLLTDVSKQVEELRLAYGSRGSYHANGVHASEPTLDSQRRSSTMEVRFATELEHSKTEASPTFLPHSKSSSAFPLLYAELEMERAWEPIDFFAARNPLTSFRPHHQFTGNSKSTSVGNMREVSTRPLVYMDTPCPLPMVAPAPPVLFYLDRALQSPCPVPASGEDTAGQAGAGNPVAAKPPRQSPAFRSSLPSGLGASQT
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(105383..105429,105533..106061,106228..106303,106400..106468,106694..106857,107143..107238,108381..108528,108722..108836,108965..109062,109719..109797,111009..111051,111399..111623))
location: region:105383-111623:-1
so has part: feature:111399-111623:-1:exon
so has part: feature:111009-111051:-1:exon
so has part: feature:109719-109797:-1:exon
so has part: feature:108965-109062:-1:exon
so has part: feature:108722-108836:-1:exon
so has part: feature:108381-108528:-1:exon
so has part: feature:107143-107238:-1:exon
so has part: feature:106694-106857:-1:exon
so has part: feature:106400-106468:-1:exon
so has part: feature:106228-106303:-1:exon
so has part: feature:105533-106061:-1:exon
so has part: feature:105383-105429:-1:exon

XP_019143294.1
type: Protein
SIO_000068: ncbiprotein

position:105383:-1
position: 105383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111399-111623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111009-111051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109719-109797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108965-109062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108722-108836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108381-108528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107143-107238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106694-106857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106400-106468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106228-106303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105533-106061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105383-105429:-1:exon

RAP2C
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RAP2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(125752..136620)
location: region:125752-136620:-1
so has part: feature:125752-136620:-1:exon
subclass of: SO_0000010

104691331
type: Gene
SIO_000068: ncbigene

position:125752:-1
position: 125752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136620:-1
position: 136620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125752-136620:-1:exon

RAP2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RAP2C
product: RAP2C, member of RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_039572010.1
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(125752..128250,133096..133415,135129..135518,136524..136620))
location: region:125752-136620:-1
so has part: feature:136524-136620:-1:exon
so has part: feature:135129-135518:-1:exon
so has part: feature:133096-133415:-1:exon
so has part: feature:125752-128250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136524-136620:-1:exon

position:136524:-1
position: 136524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135129-135518:-1:exon

position:135129:-1
position: 135129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135518:-1
position: 135518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133096-133415:-1:exon

position:133096:-1
position: 133096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133415:-1
position: 133415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125752-128250:-1:exon

position:128250:-1
position: 128250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAP2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RAP2C
product: RAP2C, member of RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 62 ESTs, 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019287797.2
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(125752..128250,133096..133415,135129..135689))
location: region:125752-135689:-1
so has part: feature:135129-135689:-1:exon
so has part: feature:133096-133415:-1:exon
so has part: feature:125752-128250:-1:exon

position:135689:-1
position: 135689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135129-135689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133096-133415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125752-128250:-1:exon

RAP2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RAP2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-2c
translation: MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLESEREVLSAEGRALAQEWGCPFMETSAKSKTMVDELFAEIVRQMNYASLPEKQDQCCTTCIIQ
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(133137..133415,135129..135401))
location: region:133137-135401:-1
so has part: feature:135129-135401:-1:exon
so has part: feature:133137-133415:-1:exon

XP_019143342.2
type: Protein
SIO_000068: ncbiprotein

position:133137:-1
position: 133137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135401:-1
position: 135401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135129-135401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133137-133415:-1:exon

RAP2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RAP2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-2c
translation: MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLESEREVLSAEGRALAQEWGCPFMETSAKSKTMVDELFAEIVRQMNYASLPEKQDQCCTTCIIQ
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(133137..133415,135129..135401))
location: region:133137-135401:-1
so has part: feature:135129-135401:-1:exon
so has part: feature:133137-133415:-1:exon

XP_039427944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135129-135401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133137-133415:-1:exon

MBNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149787..244697)
location: region:149787-244697:-1
so has part: feature:149787-244697:-1:exon
subclass of: SO_0000010

104691251
type: Gene
SIO_000068: ncbigene

position:149787:-1
position: 149787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244697:-1
position: 244697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149787-244697:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039572352.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,244590..244697))
location: region:149787-244697:-1
so has part: feature:244590-244697:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159300-159373:-1:exon
so has part: feature:149787-157393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244590-244697:-1:exon

position:244590:-1
position: 244590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

position:182796:-1
position: 182796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182960:-1
position: 182960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

position:174627:-1
position: 174627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174827:-1
position: 174827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

position:172959:-1
position: 172959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173195:-1
position: 173195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

position:165307:-1
position: 165307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165457:-1
position: 165457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

position:162997:-1
position: 162997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163032:-1
position: 163032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

position:160801:-1
position: 160801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160895:-1
position: 160895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

position:159300:-1
position: 159300
reference: sequence
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position:159373:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:149787-157393:-1:exon

position:157393:-1
position: 157393
reference: sequence
type: ReverseStrandPosition
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MBNL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 35 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XR_005604731.1
SIO_010081: MBNL3
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:149787-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:159300-159373:-1:exon
so has part: feature:149787-157393:-1:exon

position:244671:-1
position: 244671
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:244590-244671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

position:209749:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 8
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005604730.1
SIO_010081: MBNL3
so part of: MBNL3
location: complement(join(149787..157390,159300..159373,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:149787-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149787-157390:-1:exon

position:157390:-1
position: 157390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MBNL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_005604729.1
SIO_010081: MBNL3
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:149787-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:159300-159373:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:244590-244671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_039572350.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157390,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:149787-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159300-159373:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:244590-244671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149787-157390:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_039572346.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:149787-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
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so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:244590-244671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039572348.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244356..244405))
location: region:149787-244405:-1
so has part: feature:244356-244405:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
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so has part: feature:160801-160895:-1:exon
so has part: feature:159300-159373:-1:exon
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position:244405:-1
position: 244405
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:244356-244405:-1:exon

position:244356:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

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SIO_000300: 4
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SIO_000300: 6
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SIO_000300: 9
SIO_000628: feature:159300-159373:-1:exon

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SIO_000300: 10
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039572354.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,244356..244373))
location: region:149787-244373:-1
so has part: feature:244356-244373:-1:exon
so has part: feature:182796-182960:-1:exon
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position:244373:-1
position: 244373
reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:244356-244373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

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SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

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SIO_000300: 9
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MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039572347.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,243252..243446))
location: region:149787-243446:-1
so has part: feature:243252-243446:-1:exon
so has part: feature:209749-210750:-1:exon
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position:243446:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:243252-243446:-1:exon

position:243252:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 9
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039572353.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,243252..243345))
location: region:149787-243345:-1
so has part: feature:243252-243345:-1:exon
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so has part: feature:149787-157393:-1:exon

position:243345:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:243252-243345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

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SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

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SIO_000300: 4
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SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149787-157393:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039572349.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(149787..157393,159300..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,220238..220257))
location: region:149787-220257:-1
so has part: feature:220238-220257:-1:exon
so has part: feature:209749-210750:-1:exon
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position:220257:-1
position: 220257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220238-220257:-1:exon

position:220238:-1
position: 220238
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 10
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MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_039572351.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(157211..157393,159300..159373,160801..160895,165307..165457,172959..173195,174627..174827,182796..182960,209749..210750,244590..244671))
location: region:157211-244671:-1
so has part: feature:244590-244671:-1:exon
so has part: feature:209749-210750:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159300-159373:-1:exon
so has part: feature:157211-157393:-1:exon

position:157211:-1
position: 157211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244590-244671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209749-210750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159300-159373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157211-157393:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X2
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428285.1
type: Protein
SIO_000068: ncbiprotein

position:159317:-1
position: 159317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209922:-1
position: 209922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MAVNVSLVRDTKWLTLEVCREFQRGTCSRSDAECKFAHPSRSCHVENGRVIACFDSLKGRCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182960,209749..209922))
location: region:159317-209922:-1
so has part: feature:209749-209922:-1:exon
so has part: feature:182796-182960:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209749-209922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182796-182960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X3
translation: MFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182849))
location: region:159317-182849:-1
so has part: feature:182796-182849:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428286.1
type: Protein
SIO_000068: ncbiprotein

position:182849:-1
position: 182849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182796-182849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X3
translation: MFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182849))
location: region:159317-182849:-1
so has part: feature:182796-182849:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182796-182849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159317-159373:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X3
translation: MFAQQMQFMLPGAQLQPITTFPVTPSLATSPTMAFSPYLSHVSPGMGLVPAELLPNTPVLVSGNPAVTVPGGSAGQKLMRTDKLEVCREFQRGNCTRGENDCRYAHPIDIAMIDTNENTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQHQVNQTAAAAMALPPGALQPLPKRPALEKNNGATTVFNPSVFHYQQALANMQLQQPTFIPTGSVLCMTPTASVVPMMHGATPTTVSAATTPATSVPFAATATANQISQLSVDELSSSMFVSQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(159317..159373,160801..160895,162997..163032,165307..165457,172959..173195,174627..174827,182796..182849))
location: region:159317-182849:-1
so has part: feature:182796-182849:-1:exon
so has part: feature:174627-174827:-1:exon
so has part: feature:172959-173195:-1:exon
so has part: feature:165307-165457:-1:exon
so has part: feature:162997-163032:-1:exon
so has part: feature:160801-160895:-1:exon
so has part: feature:159317-159373:-1:exon

XP_039428288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182796-182849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174627-174827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172959-173195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165307-165457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162997-163032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160801-160895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159317-159373:-1:exon

HS6ST2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HS6ST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264731..370844)
location: region:264731-370844:-1
so has part: feature:264731-370844:-1:exon
subclass of: SO_0000010

104691252
type: Gene
SIO_000068: ncbigene

position:264731:-1
position: 264731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370844:-1
position: 370844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264731-370844:-1:exon

HS6ST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HS6ST2
product: heparan sulfate 6-O-sulfotransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572109.1
SIO_010081: HS6ST2
subclass of: SO_0000673
so part of: HS6ST2
location: complement(join(264731..267566,370198..370844))
location: region:264731-370844:-1
so has part: feature:370198-370844:-1:exon
so has part: feature:264731-267566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370198-370844:-1:exon

position:370198:-1
position: 370198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264731-267566:-1:exon

position:267566:-1
position: 267566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HS6ST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HS6ST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-sulfate 6-O-sulfotransferase 2
translation: MEDRSHKVLLALVMLFLFAVIVLQYVCPGTECQLLRLRALSPAAAADPYRAEDETPARFVPRFNFSASDLLRRVDFNIKGDDLIVFLHIQKTGGTTFGRHLVRNIQLEQPCECRAGQKKCTCHRPGKRETWLFSRFSTGWSCGLHADWTELTNCVPSVVDSKKEVRLRPSRNFYYITILRDPVSRYLSEWRHVQRGATWKASLHVCDGRSPTTEELPSCYTGDDWSGCSLQEFMDCPYNLANNRQVRMLSDLSLVGCYNLSVMPEEQRNKVLLDSAKENLKRMAFFGLTEFQRKTQYLFEKTFNMNFISPFTQYNSTRASSVEIDKQTQQRIEALNFLDMELYDYAKDLFLQRYQYMRQKEHQEARRKRQEQRKILRAKQAHLREQGENSSSTDYTGNVERWRR
SIO_010081: HS6ST2
subclass of: SO_0000673
so part of: HS6ST2
location: complement(join(266864..267566,370198..370709))
location: region:266864-370709:-1
so has part: feature:370198-370709:-1:exon
so has part: feature:266864-267566:-1:exon

XP_039428043.1
type: Protein
SIO_000068: ncbiprotein

position:266864:-1
position: 266864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370709:-1
position: 370709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370198-370709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266864-267566:-1:exon

LOC109145035
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435197..446047)
location: region:435197-446047:-1
so has part: feature:435197-446047:-1:exon
subclass of: SO_0000011

109145035
type: Gene
SIO_000068: ncbigene

position:435197:-1
position: 435197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446047:-1
position: 446047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435197-446047:-1:exon

LOC109145035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145035
product: uncharacterized LOC109145035
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002046159.1
SIO_010081: LOC109145035
subclass of: SO_0000673
so part of: LOC109145035
location: complement(join(435197..435534,444794..444916,445867..446047))
location: region:435197-446047:-1
so has part: feature:445867-446047:-1:exon
so has part: feature:444794-444916:-1:exon
so has part: feature:435197-435534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445867-446047:-1:exon

position:445867:-1
position: 445867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444794-444916:-1:exon

position:444794:-1
position: 444794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444916:-1
position: 444916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435197-435534:-1:exon

position:435534:-1
position: 435534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109145034
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454320..467623)
location: region:454320-467623:-1
so has part: feature:454320-467623:-1:exon
subclass of: SO_0000011

109145034
type: Gene
SIO_000068: ncbigene

position:454320:-1
position: 454320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467623:-1
position: 467623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454320-467623:-1:exon

LOC109145034
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145034
product: uncharacterized LOC109145034
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002046158.2
SIO_010081: LOC109145034
subclass of: SO_0000673
so part of: LOC109145034
location: complement(join(454320..457600,458772..458838,460374..467623))
location: region:454320-467623:-1
so has part: feature:460374-467623:-1:exon
so has part: feature:458772-458838:-1:exon
so has part: feature:454320-457600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460374-467623:-1:exon

position:460374:-1
position: 460374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458772-458838:-1:exon

position:458772:-1
position: 458772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458838:-1
position: 458838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454320-457600:-1:exon

position:457600:-1
position: 457600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(474302..707710)
location: region:474302-707710:-1
so has part: feature:474302-707710:-1:exon
subclass of: SO_0000010

104691253
type: Gene
SIO_000068: ncbigene

position:474302:-1
position: 474302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707710:-1
position: 707710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474302-707710:-1:exon

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GPC4
product: glypican 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039572288.1
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(474302..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,587956..588144,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707701))
location: region:474302-707701:-1
so has part: feature:707404-707701:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:587956-588144:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:474302-476478:-1:exon

position:707701:-1
position: 707701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707701:-1:exon

position:707404:-1
position: 707404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

position:698306:-1
position: 698306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698467:-1
position: 698467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

position:638742:-1
position: 638742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639436:-1
position: 639436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

position:618018:-1
position: 618018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618151:-1
position: 618151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

position:615156:-1
position: 615156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615281:-1
position: 615281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

position:604224:-1
position: 604224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604344:-1
position: 604344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:587956-588144:-1:exon

position:587956:-1
position: 587956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588144:-1
position: 588144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:586072-586228:-1:exon

position:586072:-1
position: 586072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586228:-1
position: 586228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:510879-511037:-1:exon

position:510879:-1
position: 510879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511037:-1
position: 511037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:496764-497155:-1:exon

position:496764:-1
position: 496764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497155:-1
position: 497155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:486216-486381:-1:exon

position:486216:-1
position: 486216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486381:-1
position: 486381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:480275-480405:-1:exon

position:480275:-1
position: 480275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480405:-1
position: 480405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:479923-480069:-1:exon

position:479923:-1
position: 479923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480069:-1
position: 480069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:479387-479523:-1:exon

position:479387:-1
position: 479387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479523:-1
position: 479523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:477317-477492:-1:exon

position:477317:-1
position: 477317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477492:-1
position: 477492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:474302-476478:-1:exon

position:476478:-1
position: 476478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GPC4
product: glypican 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_039572289.1
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(475844..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707700))
location: region:475844-707700:-1
so has part: feature:707404-707700:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:475844-476478:-1:exon

position:475844:-1
position: 475844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707700:-1
position: 707700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475844-476478:-1:exon

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GPC4
product: glypican 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019287753.2
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(475844..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,587956..588144,604224..604344,615156..615281,618018..618151,638742..639436,641493..641541))
location: region:475844-641541:-1
so has part: feature:641493-641541:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:587956-588144:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:475844-476478:-1:exon

position:641541:-1
position: 641541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641493-641541:-1:exon

position:641493:-1
position: 641493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587956-588144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475844-476478:-1:exon

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GPC4
product: glypican 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572290.1
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(475844..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,540959..541394))
location: region:475844-541394:-1
so has part: feature:540959-541394:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:475844-476478:-1:exon

position:541394:-1
position: 541394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540959-541394:-1:exon

position:540959:-1
position: 540959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475844-476478:-1:exon

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4 isoform X2
translation: MLGSSGALLLPLLAAVLLGAPVPAQPAGEAACLSVRTAFQVLQPGAKWVPEGPVPGTDLQVCIPKGSTCCSRKMEEKYQATARLKMEQLLQSASVDLKFLVIQNAAVFQEAFEIVVRHARNFTNSMFRIYYQSMGPRALKFVGELFTDISLYILGSDINVNDMVNEFFDSLFPLVYSHLINPGFPDPSVEMTECLRAARRDLKVFGNYPKMMMTQVSKSLQATRVFLQALNLGIEVINTTDHLKFSKDCGRALLKMWYCSHCQGLLLAKPCAGYCGAVMQGCLAGVLEIQNLWKEYIGSLEGLTRGMHGIYDMEHVLLSLFSVVRDAIVHVQKNEGKLSTAISRLCGHAQQRQIRSANYPEDLFIDKKVLKVTDIEQEETLSSRRRELIAKLKSHSSFYSTLPEYICNHSSAVQNDTLCWNGQEVVERYSPQITRNGAKAQAGNHEVKIKGPEPVISQIIDKLKHINQLLRGMTLPHRKASGKAPEEEEEESGDCDDEDDCGRGSGDGVLRVRNQLRFLAGDHLKVCSQGYTCCSQEMEEKYSQQSKQDFRNAVVELSNHLQTVFSSRYKKFDEFFKELLENAEKSLNDMFVRTYGRLYMQNSELFKDLFVELKRYYVGGNVNLEEMLNEFWARLLERMFRLVNPQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVISKVSVVNPTPQGTRALLKMMYCPHCQGLVSVKPCYNYCFNVMRGCLANQGDLDAEWNIFMDSMLLVAERLEGPFNIESVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPKTLAQGRTARSVSESGFSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPGNICNDEKMSVGTVNENECWNGSAKSRYDFAVTGNGLASQVNNPEVEVDITKPDMVIRQQIMALRVMTNKLKNAYSGNDVDFIDISEESSGEESGSGCELQQCSPEFEFNATEVTGNSSKSDKTVNTSAATRSGLSQAALLLNILFLAMQRQWR
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(476270..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707569))
location: region:476270-707569:-1
so has part: feature:707404-707569:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:476270-476478:-1:exon

XP_039428223.1
type: Protein
SIO_000068: ncbiprotein

position:476270:-1
position: 476270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707569:-1
position: 707569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:476270-476478:-1:exon

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4 isoform X1
translation: MLGSSGALLLPLLAAVLLGAPVPAQPAGEAACLSVRTAFQVLQPGAKWVPEGPVPGTDLQVCIPKGSTCCSRKMEEKYQATARLKMEQLLQSASVDLKFLVIQNAAVFQEAFEIVVRHARNFTNSMFRIYYQSMGPRALKFVGELFTDISLYILGSDINVNDMVNEFFDSLFPLVYSHLINPGFPDPSVEMTECLRAARRDLKVFGNYPKMMMTQVSKSLQATRVFLQALNLGIEVINTTDHLKFSKDCGRALLKMWYCSHCQGLLLAKPCAGYCGAVMQGCLAGVLEIQNLWKEYIGSLEGLTRGMHGIYDMEHVLLSLFSVVRDAIVHVQKNEGKLSTAISRLCGHAQQRQIRSANYPEDLFIDKKVLKVTDIEQEETLSSRRRELIAKLKSHSSFYSTLPEYICNHSSAVQNDTLCWNGQEVVERYSPQITRNGAKAQAGNHEVKIKGPEPVISQIIDKLKHINQVNHESCATWTAWLGPVWLVLFLGCRGTRIPQRSKHPAAEQSRSLSARWTWVLAVVHWSNGFELLLRGMTLPHRKASGKAPEEEEEESGDCDDEDDCGRGSGDGVLRVRNQLRFLAGDHLKVCSQGYTCCSQEMEEKYSQQSKQDFRNAVVELSNHLQTVFSSRYKKFDEFFKELLENAEKSLNDMFVRTYGRLYMQNSELFKDLFVELKRYYVGGNVNLEEMLNEFWARLLERMFRLVNPQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVISKVSVVNPTPQGTRALLKMMYCPHCQGLVSVKPCYNYCFNVMRGCLANQGDLDAEWNIFMDSMLLVAERLEGPFNIESVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPKTLAQGRTARSVSESGFSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPGNICNDEKMSVGTVNENECWNGSAKSRYDFAVTGNGLASQVNNPEVEVDITKPDMVIRQQIMALRVMTNKLKNAYSGNDVDFIDISEESSGEESGSGCELQQCSPEFEFNATEVTGNSSKSDKTVNTSAATRSGLSQAALLLNILFLAMQRQWR
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(476270..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,587956..588144,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707569))
location: region:476270-707569:-1
so has part: feature:707404-707569:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:587956-588144:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:476270-476478:-1:exon

XP_039428222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587956-588144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:476270-476478:-1:exon

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4 isoform X3
translation: MELTEKRVKANEAFEIVVRHARNFTNSMFRIYYQSMGPRALKFVGELFTDISLYILGSDINVNDMVNEFFDSLFPLVYSHLINPGFPDPSVEMTECLRAARRDLKVFGNYPKMMMTQVSKSLQATRVFLQALNLGIEVINTTDHLKFSKDCGRALLKMWYCSHCQGLLLAKPCAGYCGAVMQGCLAGVLEIQNLWKEYIGSLEGLTRGMHGIYDMEHVLLSLFSVVRDAIVHVQKNEGKLSTAISRLCGHAQQRQIRSANYPEDLFIDKKVLKVTDIEQEETLSSRRRELIAKLKSHSSFYSTLPEYICNHSSAVQNDTLCWNGQEVVERYSPQITRNGAKAQAGNHEVKIKGPEPVISQIIDKLKHINQVNHESCATWTAWLGPVWLVLFLGCRGTRIPQRSKHPAAEQSRSLSARWTWVLAVVHWSNGFELLLRGMTLPHRKASGKAPEEEEEESGDCDDEDDCGRGSGDGVLRVRNQLRFLAGDHLKVCSQGYTCCSQEMEEKYSQQSKQDFRNAVVELSNHLQTVFSSRYKKFDEFFKELLENAEKSLNDMFVRTYGRLYMQNSELFKDLFVELKRYYVGGNVNLEEMLNEFWARLLERMFRLVNPQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVISKVSVVNPTPQGTRALLKMMYCPHCQGLVSVKPCYNYCFNVMRGCLANQGDLDAEWNIFMDSMLLVAERLEGPFNIESVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPKTLAQGRTARSVSESGFSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPGNICNDEKMSVGTVNENECWNGSAKSRYDFAVTGNGLASQVNNPEVEVDITKPDMVIRQQIMALRVMTNKLKNAYSGNDVDFIDISEESSGEESGSGCELQQCSPEFEFNATEVTGNSSKSDKTVNTSAATRSGLSQAALLLNILFLAMQRQWR
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(476270..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,586072..586228,587956..588144,604224..604344,615156..615281,618018..618151,638742..639436,641493..641526))
location: region:476270-641526:-1
so has part: feature:641493-641526:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:587956-588144:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:476270-476478:-1:exon

XP_019143298.1
type: Protein
SIO_000068: ncbiprotein

position:641526:-1
position: 641526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641493-641526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587956-588144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:476270-476478:-1:exon

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4 isoform X4
translation: MCFLPDQVRGAPPHAGPAERSRSGAGRRAAGAAAAGRDGAGSAERLLQPRGALARPRQLLPARTMPRRRGCLPPLLCALAALSLPLLLAAEPRAKSCSEVRRLYAAKGFSQSEAPSHEISGDHLKVCSQGYTCCSQEMEEKYSQQSKQDFRNAVVELSNHLQTVFSSRYKKFDEFFKELLENAEKSLNDMFVRTYGRLYMQNSELFKDLFVELKRYYVGGNVNLEEMLNEFWARLLERMFRLVNPQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVISKVSVVNPTPQGTRALLKMMYCPHCQGLVSVKPCYNYCFNVMRGCLANQGDLDAEWNIFMDSMLLVAERLEGPFNIESVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPKTLAQGRTARSVSESGFSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPGNICNDEKMSVGTVNENECWNGSAKSRYDFAVTGNGLASQVNNPEVEVDITKPDMVIRQQIMALRVMTNKLKNAYSGNDVDFIDISEESSGEESGSGCELQQCSPEFEFNATEVTGNSSKSDKTVNTSAATRSGLSQAALLLNILFLAMQRQWR
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(476270..476478,477317..477492,479387..479523,479923..480069,480275..480405,486216..486381,496764..497155,510879..511037,540959..541319))
location: region:476270-541319:-1
so has part: feature:540959-541319:-1:exon
so has part: feature:510879-511037:-1:exon
so has part: feature:496764-497155:-1:exon
so has part: feature:486216-486381:-1:exon
so has part: feature:480275-480405:-1:exon
so has part: feature:479923-480069:-1:exon
so has part: feature:479387-479523:-1:exon
so has part: feature:477317-477492:-1:exon
so has part: feature:476270-476478:-1:exon

XP_039428224.1
type: Protein
SIO_000068: ncbiprotein

position:541319:-1
position: 541319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540959-541319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510879-511037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496764-497155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486216-486381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480275-480405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479923-480069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479387-479523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477317-477492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476270-476478:-1:exon

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GPC4
product: glypican 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_039572291.1
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(559108..560272,586072..586228,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707710))
location: region:559108-707710:-1
so has part: feature:707404-707710:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:559108-560272:-1:exon

position:559108:-1
position: 559108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559108-560272:-1:exon

position:560272:-1
position: 560272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4 isoform X5
translation: MLGSSGALLLPLLAAVLLGAPVPAQPAGEAACLSVRTAFQVLQPGAKWVPEGPVPGTDLQVCIPKGSTCCSRKMEEKYQATARLKMEQLLQSASVDLKFLVIQNAAVFQEAFEIVVRHARNFTNSMFRIYYQSMGPRALKFVGELFTDISLYILGSDINVNDMVNEFFDSLFPLVYSHLINPGFPDPSVEMTECLRAARRDLKVFGNYPKMMMTQVSKSLQATRVFLQALNLGIEVINTTDHLKFSKDCGRALLKMWYCSHCQGLLLAKPCAGYCGAVMQGCLAGVLEIQNLWKEYIGSLEGLTRGMHGIYDMEHVLLSLFSVVRDAIVHVQKNEGKLSTAISRLCGHAQQRQIRSANYPEDLFIDKKVLKVTDIEQEETLSSRRRELIAKLKSHSSFYSTLPEYICNHSSAVQNDTLCWNGQEVVERYSPQITRNGAKAQAGNHEVKIKGPEPVISQIIDKLKHINQLLRGMTLPHRKASGKAPEEEEEESGDCDDEDDCGRGSGDGVLRVRNQLRFLAELVYNLDMDDISANKQLLNQQNKDSAAVPSSDPGSAATHPSPAAAIALVLLLLLGHQP
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(560097..560272,586072..586228,604224..604344,615156..615281,618018..618151,638742..639436,698306..698467,707404..707569))
location: region:560097-707569:-1
so has part: feature:707404-707569:-1:exon
so has part: feature:698306-698467:-1:exon
so has part: feature:638742-639436:-1:exon
so has part: feature:618018-618151:-1:exon
so has part: feature:615156-615281:-1:exon
so has part: feature:604224-604344:-1:exon
so has part: feature:586072-586228:-1:exon
so has part: feature:560097-560272:-1:exon

XP_039428225.1
type: Protein
SIO_000068: ncbiprotein

position:560097:-1
position: 560097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707404-707569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698306-698467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638742-639436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618018-618151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615156-615281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604224-604344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586072-586228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:560097-560272:-1:exon

PHF6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PHF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 764865..793140
location: region:764865-793140:1
so has part: feature:764865-793140:1:exon
subclass of: SO_0000010

104691255
type: Gene
SIO_000068: ncbigene

position:764865:1
position: 764865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793140:1
position: 793140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764865-793140:1:exon

PHF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHF6
product: PHD finger protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039572188.1
SIO_010081: PHF6
subclass of: SO_0000673
so part of: PHF6
location: join(764865..765033,769894..770073,770253..770354,773379..773512,773816..773859,785218..785384,785562..785705,786922..787026,787910..788043,788682..788811,789101..793140)
location: region:764865-793140:1
so has part: feature:764865-765033:1:exon
so has part: feature:769894-770073:1:exon
so has part: feature:770253-770354:1:exon
so has part: feature:773379-773512:1:exon
so has part: feature:773816-773859:1:exon
so has part: feature:785218-785384:1:exon
so has part: feature:785562-785705:1:exon
so has part: feature:786922-787026:1:exon
so has part: feature:787910-788043:1:exon
so has part: feature:788682-788811:1:exon
so has part: feature:789101-793140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764865-765033:1:exon

position:765033:1
position: 765033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769894-770073:1:exon

position:769894:1
position: 769894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770073:1
position: 770073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770253-770354:1:exon

position:770253:1
position: 770253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770354:1
position: 770354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:773379-773512:1:exon

position:773379:1
position: 773379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773512:1
position: 773512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:773816-773859:1:exon

position:773816:1
position: 773816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773859:1
position: 773859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785218-785384:1:exon

position:785218:1
position: 785218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785384:1
position: 785384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:785562-785705:1:exon

position:785562:1
position: 785562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785705:1
position: 785705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:786922-787026:1:exon

position:786922:1
position: 786922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787026:1
position: 787026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:787910-788043:1:exon

position:787910:1
position: 787910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788043:1
position: 788043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:788682-788811:1:exon

position:788682:1
position: 788682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788811:1
position: 788811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789101-793140:1:exon

position:789101:1
position: 789101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHF6
product: PHD finger protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039572189.1
SIO_010081: PHF6
subclass of: SO_0000673
so part of: PHF6
location: join(764865..765033,769894..770073,770253..770354,773379..773512,773816..773859,785221..785384,785562..785705,786922..787026,787910..788043,788682..793140)
location: region:764865-793140:1
so has part: feature:764865-765033:1:exon
so has part: feature:769894-770073:1:exon
so has part: feature:770253-770354:1:exon
so has part: feature:773379-773512:1:exon
so has part: feature:773816-773859:1:exon
so has part: feature:785221-785384:1:exon
so has part: feature:785562-785705:1:exon
so has part: feature:786922-787026:1:exon
so has part: feature:787910-788043:1:exon
so has part: feature:788682-793140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764865-765033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769894-770073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770253-770354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773379-773512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773816-773859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785221-785384:1:exon

position:785221:1
position: 785221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:785562-785705:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786922-787026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787910-788043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788682-793140:1:exon

PHF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 6 isoform X1
translation: MTSSVGQKKVSSRQRKCGFCRSNKDNECGQLLMSENQKVAAHHKCMLFSSALVSSHTDNESLGGFSIEDIQKEIKRGTKLMCSLCHCPGATIGCDVKTCHKTYHYYCALHDKAQIREKPSQGIYMILCRKHKKTTHNSEADLEENINEHELEPSPPKGKRRGRKGKPRKTNFKGQSEDTRSTSSHGTDEIESSSYRDRSPHRSSPSDTKPKCGFCHAGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACIKTYHYHCGVEDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKSGTDHNDIPQQQLNGN
SIO_010081: PHF6
subclass of: SO_0000673
so part of: PHF6
location: join(769936..770073,770253..770354,773379..773512,773816..773859,785218..785384,785562..785705,786922..787026,787910..788043,788682..788811)
location: region:769936-788811:1
so has part: feature:769936-770073:1:exon
so has part: feature:770253-770354:1:exon
so has part: feature:773379-773512:1:exon
so has part: feature:773816-773859:1:exon
so has part: feature:785218-785384:1:exon
so has part: feature:785562-785705:1:exon
so has part: feature:786922-787026:1:exon
so has part: feature:787910-788043:1:exon
so has part: feature:788682-788811:1:exon

XP_039428122.1
type: Protein
SIO_000068: ncbiprotein

position:769936:1
position: 769936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769936-770073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770253-770354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773379-773512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773816-773859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785218-785384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785562-785705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786922-787026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787910-788043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:788682-788811:1:exon

PHF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 6 isoform X2
translation: MTSSVGQKKVSSRQRKCGFCRSNKDNECGQLLMSENQKVAAHHKCMLFSSALVSSHTDNESLGGFSIEDIQKEIKRGTKLMCSLCHCPGATIGCDVKTCHKTYHYYCALHDKAQIREKPSQGIYMILCRKHKKTTHNSEDLEENINEHELEPSPPKGKRRGRKGKPRKTNFKGQSEDTRSTSSHGTDEIESSSYRDRSPHRSSPSDTKPKCGFCHAGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACIKTYHYHCGVEDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKSGTDHNDIPQQQLNGN
SIO_010081: PHF6
subclass of: SO_0000673
so part of: PHF6
location: join(769936..770073,770253..770354,773379..773512,773816..773859,785221..785384,785562..785705,786922..787026,787910..788043,788682..788811)
location: region:769936-788811:1
so has part: feature:769936-770073:1:exon
so has part: feature:770253-770354:1:exon
so has part: feature:773379-773512:1:exon
so has part: feature:773816-773859:1:exon
so has part: feature:785221-785384:1:exon
so has part: feature:785562-785705:1:exon
so has part: feature:786922-787026:1:exon
so has part: feature:787910-788043:1:exon
so has part: feature:788682-788811:1:exon

XP_039428123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:769936-770073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770253-770354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773379-773512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773816-773859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785221-785384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785562-785705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786922-787026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787910-788043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:788682-788811:1:exon

LOC104691256
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(794344..805564)
location: region:794344-805564:-1
so has part: feature:794344-805564:-1:exon
subclass of: SO_0000011

104691256
type: Gene
SIO_000068: ncbigene

position:794344:-1
position: 794344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805564:-1
position: 805564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794344-805564:-1:exon

LOC104691256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104691256
product: uncharacterized LOC104691256, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005604705.1
SIO_010081: LOC104691256
subclass of: SO_0000673
so part of: LOC104691256
location: complement(join(794344..795725,801977..802062,805036..805564))
location: region:794344-805564:-1
so has part: feature:805036-805564:-1:exon
so has part: feature:801977-802062:-1:exon
so has part: feature:794344-795725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805036-805564:-1:exon

position:805036:-1
position: 805036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801977-802062:-1:exon

position:801977:-1
position: 801977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802062:-1
position: 802062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794344-795725:-1:exon

position:795725:-1
position: 795725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104691256
product: uncharacterized LOC104691256, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005604706.1
SIO_010081: LOC104691256
subclass of: SO_0000673
so part of: LOC104691256
location: complement(join(799180..799331,801977..802062,805036..805564))
location: region:799180-805564:-1
so has part: feature:805036-805564:-1:exon
so has part: feature:801977-802062:-1:exon
so has part: feature:799180-799331:-1:exon

position:799180:-1
position: 799180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805036-805564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801977-802062:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799180-799331:-1:exon

position:799331:-1
position: 799331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HPRT1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HPRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 804987..823320
location: region:804987-823320:1
so has part: feature:804987-823320:1:exon
subclass of: SO_0000010

104691332
type: Gene
SIO_000068: ncbigene

position:804987:1
position: 804987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823320:1
position: 823320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804987-823320:1:exon

HPRT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HPRT1
product: hypoxanthine phosphoribosyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572190.1
SIO_010081: HPRT1
subclass of: SO_0000673
so part of: HPRT1
location: join(804987..805152,807087..807193,808662..808845,812473..812538,813167..813184,815471..815553,817946..817992,819837..819913,820526..823320)
location: region:804987-823320:1
so has part: feature:804987-805152:1:exon
so has part: feature:807087-807193:1:exon
so has part: feature:808662-808845:1:exon
so has part: feature:812473-812538:1:exon
so has part: feature:813167-813184:1:exon
so has part: feature:815471-815553:1:exon
so has part: feature:817946-817992:1:exon
so has part: feature:819837-819913:1:exon
so has part: feature:820526-823320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804987-805152:1:exon

position:805152:1
position: 805152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807087-807193:1:exon

position:807087:1
position: 807087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807193:1
position: 807193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808662-808845:1:exon

position:808662:1
position: 808662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808845:1
position: 808845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:812473-812538:1:exon

position:812473:1
position: 812473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812538:1
position: 812538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:813167-813184:1:exon

position:813167:1
position: 813167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813184:1
position: 813184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815471-815553:1:exon

position:815471:1
position: 815471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815553:1
position: 815553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:817946-817992:1:exon

position:817946:1
position: 817946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817992:1
position: 817992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:819837-819913:1:exon

position:819837:1
position: 819837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819913:1
position: 819913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:820526-823320:1:exon

position:820526:1
position: 820526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPRT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HPRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypoxanthine-guanine phosphoribosyltransferase
translation: MATPSPCIVIGDDEQGYDLDLFCIPKHYADDLEKVYIPHGLIMDRTERLAREIMKGMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDKSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMKTLLSLLKQYNPKMVKVASLLVKRTPRSVGYRPDFVGFEVPDKFVVGYALDYNEYFRDLNHICVISETGKQKYKA
SIO_010081: HPRT1
subclass of: SO_0000673
so part of: HPRT1
location: join(805126..805152,807087..807193,808662..808845,812473..812538,813167..813184,815471..815553,817946..817992,819837..819913,820526..820573)
location: region:805126-820573:1
so has part: feature:805126-805152:1:exon
so has part: feature:807087-807193:1:exon
so has part: feature:808662-808845:1:exon
so has part: feature:812473-812538:1:exon
so has part: feature:813167-813184:1:exon
so has part: feature:815471-815553:1:exon
so has part: feature:817946-817992:1:exon
so has part: feature:819837-819913:1:exon
so has part: feature:820526-820573:1:exon

XP_039428124.1
type: Protein
SIO_000068: ncbiprotein

position:805126:1
position: 805126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820573:1
position: 820573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805126-805152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807087-807193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808662-808845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812473-812538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:813167-813184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815471-815553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817946-817992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819837-819913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820526-820573:1:exon

LOC109145033
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(826827..834563)
location: region:826827-834563:-1
so has part: feature:826827-834563:-1:exon
subclass of: SO_0000011

109145033
type: Gene
SIO_000068: ncbigene

position:826827:-1
position: 826827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834563:-1
position: 834563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826827-834563:-1:exon

LOC109145033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145033
product: uncharacterized LOC109145033, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_005604703.1
SIO_010081: LOC109145033
subclass of: SO_0000673
so part of: LOC109145033
location: complement(join(826827..830568,832838..832903,834461..834563))
location: region:826827-834563:-1
so has part: feature:834461-834563:-1:exon
so has part: feature:832838-832903:-1:exon
so has part: feature:826827-830568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:834461-834563:-1:exon

position:834461:-1
position: 834461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:832838-832903:-1:exon

position:832838:-1
position: 832838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832903:-1
position: 832903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:826827-830568:-1:exon

position:830568:-1
position: 830568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109145033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145033
product: uncharacterized LOC109145033, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XR_005604702.1
SIO_010081: LOC109145033
subclass of: SO_0000673
so part of: LOC109145033
location: complement(join(826827..830568,832838..832900,834461..834559))
location: region:826827-834559:-1
so has part: feature:834461-834559:-1:exon
so has part: feature:832838-832900:-1:exon
so has part: feature:826827-830568:-1:exon

position:834559:-1
position: 834559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834461-834559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832838-832900:-1:exon

position:832900:-1
position: 832900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:826827-830568:-1:exon

LOC109145033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145033
product: uncharacterized LOC109145033, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_005604704.1
SIO_010081: LOC109145033
subclass of: SO_0000673
so part of: LOC109145033
location: complement(join(826827..830386,830496..830568,832838..832900,834461..834558))
location: region:826827-834558:-1
so has part: feature:834461-834558:-1:exon
so has part: feature:832838-832900:-1:exon
so has part: feature:830496-830568:-1:exon
so has part: feature:826827-830386:-1:exon

position:834558:-1
position: 834558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834461-834558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832838-832900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830496-830568:-1:exon

position:830496:-1
position: 830496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:826827-830386:-1:exon

position:830386:-1
position: 830386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109145015
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 849997..863478
location: region:849997-863478:1
so has part: feature:849997-863478:1:exon
subclass of: SO_0000011

109145015
type: Gene
SIO_000068: ncbigene

position:849997:1
position: 849997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863478:1
position: 863478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849997-863478:1:exon

LOC109145015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145015
product: uncharacterized LOC109145015
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002046137.2
SIO_010081: LOC109145015
subclass of: SO_0000673
so part of: LOC109145015
location: join(849997..850135,858864..858980,862863..863034,863195..863478)
location: region:849997-863478:1
so has part: feature:849997-850135:1:exon
so has part: feature:858864-858980:1:exon
so has part: feature:862863-863034:1:exon
so has part: feature:863195-863478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849997-850135:1:exon

position:850135:1
position: 850135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858864-858980:1:exon

position:858864:1
position: 858864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858980:1
position: 858980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862863-863034:1:exon

position:862863:1
position: 862863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863034:1
position: 863034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863195-863478:1:exon

position:863195:1
position: 863195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PABIR2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PABIR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(877410..888423)
location: region:877410-888423:-1
so has part: feature:877410-888423:-1:exon
subclass of: SO_0000010

104691257
type: Gene
SIO_000068: ncbigene

position:877410:-1
position: 877410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888423:-1
position: 888423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877410-888423:-1:exon

PABIR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PABIR2
product: PABIR family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_039572114.1
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(877410..879971,881006..881102,883377..883438,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888423))
location: region:877410-888423:-1
so has part: feature:887984-888423:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883438:-1:exon
so has part: feature:881006-881102:-1:exon
so has part: feature:877410-879971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888423:-1:exon

position:887984:-1
position: 887984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

position:887574:-1
position: 887574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887652:-1
position: 887652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

position:886216:-1
position: 886216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886272:-1
position: 886272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

position:885804:-1
position: 885804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885847:-1
position: 885847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

position:885669:-1
position: 885669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885723:-1
position: 885723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

position:885341:-1
position: 885341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885442:-1
position: 885442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

position:883967:-1
position: 883967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884055:-1
position: 884055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883438:-1:exon

position:883377:-1
position: 883377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883438:-1
position: 883438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:881006-881102:-1:exon

position:881006:-1
position: 881006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881102:-1
position: 881102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:877410-879971:-1:exon

position:879971:-1
position: 879971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PABIR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PABIR2
product: PABIR family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572113.1
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(877410..879971,881006..881102,883377..883441,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888421))
location: region:877410-888421:-1
so has part: feature:887984-888421:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883441:-1:exon
so has part: feature:881006-881102:-1:exon
so has part: feature:877410-879971:-1:exon

position:888421:-1
position: 888421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883441:-1:exon

position:883441:-1
position: 883441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:881006-881102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:877410-879971:-1:exon

PABIR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PABIR2
product: PABIR family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_039572115.1
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(879812..879971,881001..881102,883377..883441,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888423))
location: region:879812-888423:-1
so has part: feature:887984-888423:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883441:-1:exon
so has part: feature:881001-881102:-1:exon
so has part: feature:879812-879971:-1:exon

position:879812:-1
position: 879812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881001-881102:-1:exon

position:881001:-1
position: 881001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:879812-879971:-1:exon

PABIR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PABIR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PABIR family member 2 isoform X2
translation: MAQEKMELDLELPPGSAAAPGDGGGLRRSNSAPLIHGLSDNSQVFQPYVLRTRRNSTTVMSRHGMFLSSSPIRIPSSRLHQIRREEGVDLMNREAAHEREVQTAMQISQSWEESLSLSDNDLDKSEKSFSPKRIDFIPVSPAPSPTRGIGKQCFSPSLQMFVSSNGLPPSPIPSPTRRFCKRSQSPINCIRPSVLGPIKRKGEMETESQPKRLFQGTTNMLSPDVTHLTDLSSCLSSDILDGSSSSVGSSSDSLTKGSITTESPVTCSNSCSSFILMDDFSPK
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(879821..879971,881006..881102,883377..883438,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888099))
location: region:879821-888099:-1
so has part: feature:887984-888099:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883438:-1:exon
so has part: feature:881006-881102:-1:exon
so has part: feature:879821-879971:-1:exon

XP_039428048.1
type: Protein
SIO_000068: ncbiprotein

position:879821:-1
position: 879821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888099:-1
position: 888099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881006-881102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879821-879971:-1:exon

PABIR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PABIR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PABIR family member 2 isoform X1
translation: MAQEKMELDLELPPGSAAAPGDGGGLRRSNSAPLIHGLSDNSQVFQPYVLRTRRNSTTVMSRHGMFLSSSPIRIPSSRLHQIRREEGVDLMNREAAHEREVQTAMQISQSWEESLSLSDNDLDKSEKSFSPKRIDFIPVSPAPSPTRGIGKQCFSPSLQMFVSSNGLPPSPIPSPTRRFCNRRSQSPINCIRPSVLGPIKRKGEMETESQPKRLFQGTTNMLSPDVTHLTDLSSCLSSDILDGSSSSVGSSSDSLTKGSITTESPVTCSNSCSSFILMDDFSPK
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(879821..879971,881006..881102,883377..883441,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888099))
location: region:879821-888099:-1
so has part: feature:887984-888099:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883441:-1:exon
so has part: feature:881006-881102:-1:exon
so has part: feature:879821-879971:-1:exon

XP_039428047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881006-881102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879821-879971:-1:exon

PABIR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PABIR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PABIR family member 2 isoform X3
translation: MAQEKMELDLELPPGSAAAPGDGGGLRRSNSAPLIHGLSDNSQVFQPYVLRTRRNSTTVMSRHGMFLSSSPIRIPSSRLHQIRREEGVDLMNREAAHEREVQTAMQISQSWEESLSLSDNDLDKSEKSFSPKRIDFIPVSPAPSPTRGIGKQCFSPSLQMFVSSNGLPPSPIPSPTRRFCNRRSQSPINCIRPSVLGPIKRKGEMETESQPKRLFQGTTNMLSPDVTHLTDLSSWYSCPQIFSMGVAAVLALPLIP
SIO_010081: PABIR2
subclass of: SO_0000673
so part of: PABIR2
location: complement(join(879910..879971,881001..881102,883377..883441,883967..884055,885341..885442,885669..885723,885804..885847,886216..886272,887574..887652,887984..888099))
location: region:879910-888099:-1
so has part: feature:887984-888099:-1:exon
so has part: feature:887574-887652:-1:exon
so has part: feature:886216-886272:-1:exon
so has part: feature:885804-885847:-1:exon
so has part: feature:885669-885723:-1:exon
so has part: feature:885341-885442:-1:exon
so has part: feature:883967-884055:-1:exon
so has part: feature:883377-883441:-1:exon
so has part: feature:881001-881102:-1:exon
so has part: feature:879910-879971:-1:exon

XP_039428049.1
type: Protein
SIO_000068: ncbiprotein

position:879910:-1
position: 879910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887984-888099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887574-887652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886216-886272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885804-885847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885669-885723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885341-885442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883967-884055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883377-883441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881001-881102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879910-879971:-1:exon

LOC120412059
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120412059
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(880051..880194)
location: region:880051-880194:-1
so has part: feature:880051-880194:-1:exon
subclass of: SO_0000578

120412059
type: Gene
SIO_000068: ncbigene

position:880051:-1
position: 880051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880194:-1
position: 880194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880051-880194:-1:exon

LOC120412059
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: snoRNA
gene: LOC120412059
product: small nucleolar RNA U109
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01233
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005604738.1
SIO_010081: LOC120412059
subclass of: SO_0000673
so part of: LOC120412059
location: complement(880051..880194)
location: region:880051-880194:-1
so has part: feature:880051-880194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880051-880194:-1:exon

PABIR3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PABIR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 891633..907872
location: region:891633-907872:1
so has part: feature:891633-907872:1:exon
subclass of: SO_0000010

104691258
type: Gene
SIO_000068: ncbigene

position:891633:1
position: 891633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907872:1
position: 907872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891633-907872:1:exon

PABIR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PABIR3
product: PABIR family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572311.1
SIO_010081: PABIR3
subclass of: SO_0000673
so part of: PABIR3
location: join(891633..891962,895231..895309,899217..899273,901339..901382,901462..901516,901942..902034,902491..902579,903218..903282,904298..904394,905507..907872)
location: region:891633-907872:1
so has part: feature:891633-891962:1:exon
so has part: feature:895231-895309:1:exon
so has part: feature:899217-899273:1:exon
so has part: feature:901339-901382:1:exon
so has part: feature:901462-901516:1:exon
so has part: feature:901942-902034:1:exon
so has part: feature:902491-902579:1:exon
so has part: feature:903218-903282:1:exon
so has part: feature:904298-904394:1:exon
so has part: feature:905507-907872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891633-891962:1:exon

position:891962:1
position: 891962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895231-895309:1:exon

position:895231:1
position: 895231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895309:1
position: 895309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899217-899273:1:exon

position:899217:1
position: 899217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899273:1
position: 899273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:901339-901382:1:exon

position:901339:1
position: 901339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901382:1
position: 901382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901462-901516:1:exon

position:901462:1
position: 901462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901516:1
position: 901516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:901942-902034:1:exon

position:901942:1
position: 901942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902034:1
position: 902034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:902491-902579:1:exon

position:902491:1
position: 902491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902579:1
position: 902579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:903218-903282:1:exon

position:903218:1
position: 903218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903282:1
position: 903282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:904298-904394:1:exon

position:904298:1
position: 904298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904394:1
position: 904394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905507-907872:1:exon

position:905507:1
position: 905507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PABIR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PABIR3
product: PABIR family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572312.1
SIO_010081: PABIR3
subclass of: SO_0000673
so part of: PABIR3
location: join(891633..891962,895231..895309,899217..899273,901339..901382,901462..901516,901942..902034,902491..902579,903221..903282,904298..904394,905507..907872)
location: region:891633-907872:1
so has part: feature:891633-891962:1:exon
so has part: feature:895231-895309:1:exon
so has part: feature:899217-899273:1:exon
so has part: feature:901339-901382:1:exon
so has part: feature:901462-901516:1:exon
so has part: feature:901942-902034:1:exon
so has part: feature:902491-902579:1:exon
so has part: feature:903221-903282:1:exon
so has part: feature:904298-904394:1:exon
so has part: feature:905507-907872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891633-891962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895231-895309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899217-899273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901339-901382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901462-901516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901942-902034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902491-902579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903221-903282:1:exon

position:903221:1
position: 903221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:904298-904394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905507-907872:1:exon

PABIR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PABIR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM122A isoform X1
translation: MGGAGGAGASAAAMAQEKMELDLELPPGSAAAPGDGGGLRRSNSAPLIHGLSDNSQVFQASVLRTRRNSTTVMNRHSLFVPSSPIRIPSSRLHQIKQEEGMNLLNRETVREREVQVAMQMSHSWEESLSLSDNDFEKSLSPKQVDFVPVSPAPSPTRGIGKQCFSPSLQSLVSSSGLPPSPSPSPTRRFSSRRSQSPINCIRPSVLGSIKRKGVTEMEDHPKRLFQGSTNMLTPEAAHQADLGACLSSHALDDNRSSAGSSCDSPAEVGTSTDSPVSLSDSRSPFLPVDLTAKLPMD
SIO_010081: PABIR3
subclass of: SO_0000673
so part of: PABIR3
location: join(891808..891962,895231..895309,899217..899273,901339..901382,901462..901516,901942..902034,902491..902579,903218..903282,904298..904394,905507..905666)
location: region:891808-905666:1
so has part: feature:891808-891962:1:exon
so has part: feature:895231-895309:1:exon
so has part: feature:899217-899273:1:exon
so has part: feature:901339-901382:1:exon
so has part: feature:901462-901516:1:exon
so has part: feature:901942-902034:1:exon
so has part: feature:902491-902579:1:exon
so has part: feature:903218-903282:1:exon
so has part: feature:904298-904394:1:exon
so has part: feature:905507-905666:1:exon

XP_039428245.1
type: Protein
SIO_000068: ncbiprotein

position:891808:1
position: 891808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905666:1
position: 905666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891808-891962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895231-895309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899217-899273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901339-901382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901462-901516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901942-902034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902491-902579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903218-903282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904298-904394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905507-905666:1:exon

PABIR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PABIR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM122A isoform X2
translation: MGGAGGAGASAAAMAQEKMELDLELPPGSAAAPGDGGGLRRSNSAPLIHGLSDNSQVFQASVLRTRRNSTTVMNRHSLFVPSSPIRIPSSRLHQIKQEEGMNLLNRETVREREVQVAMQMSHSWEESLSLSDNDFEKSLSPKQVDFVPVSPAPSPTRGIGKQCFSPSLQSLVSSSGLPPSPSPSPTRRFSRRSQSPINCIRPSVLGSIKRKGVTEMEDHPKRLFQGSTNMLTPEAAHQADLGACLSSHALDDNRSSAGSSCDSPAEVGTSTDSPVSLSDSRSPFLPVDLTAKLPMD
SIO_010081: PABIR3
subclass of: SO_0000673
so part of: PABIR3
location: join(891808..891962,895231..895309,899217..899273,901339..901382,901462..901516,901942..902034,902491..902579,903221..903282,904298..904394,905507..905666)
location: region:891808-905666:1
so has part: feature:891808-891962:1:exon
so has part: feature:895231-895309:1:exon
so has part: feature:899217-899273:1:exon
so has part: feature:901339-901382:1:exon
so has part: feature:901462-901516:1:exon
so has part: feature:901942-902034:1:exon
so has part: feature:902491-902579:1:exon
so has part: feature:903221-903282:1:exon
so has part: feature:904298-904394:1:exon
so has part: feature:905507-905666:1:exon

XP_039428246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891808-891962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895231-895309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899217-899273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901339-901382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901462-901516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901942-902034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902491-902579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903221-903282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904298-904394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905507-905666:1:exon

MOSPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MOSPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(913973..927978)
location: region:913973-927978:-1
so has part: feature:913973-927978:-1:exon
subclass of: SO_0000010

104691259
type: Gene
SIO_000068: ncbigene

position:913973:-1
position: 913973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927978:-1
position: 927978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913973-927978:-1:exon

MOSPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MOSPD1
product: motile sperm domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572313.1
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(913973..915015,917391..917552,919511..919737,922455..922530,922706..922962,927881..927978))
location: region:913973-927978:-1
so has part: feature:927881-927978:-1:exon
so has part: feature:922706-922962:-1:exon
so has part: feature:922455-922530:-1:exon
so has part: feature:919511-919737:-1:exon
so has part: feature:917391-917552:-1:exon
so has part: feature:913973-915015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927881-927978:-1:exon

position:927881:-1
position: 927881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922706-922962:-1:exon

position:922706:-1
position: 922706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922962:-1
position: 922962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:922455-922530:-1:exon

position:922455:-1
position: 922455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922530:-1
position: 922530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:919511-919737:-1:exon

position:919511:-1
position: 919511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919737:-1
position: 919737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917391-917552:-1:exon

position:917391:-1
position: 917391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917552:-1
position: 917552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:913973-915015:-1:exon

position:915015:-1
position: 915015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOSPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MOSPD1
product: motile sperm domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039572314.1
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(913973..915015,917391..917552,919511..919737,922455..922530,922706..922962,923782..923892,927881..927951))
location: region:913973-927951:-1
so has part: feature:927881-927951:-1:exon
so has part: feature:923782-923892:-1:exon
so has part: feature:922706-922962:-1:exon
so has part: feature:922455-922530:-1:exon
so has part: feature:919511-919737:-1:exon
so has part: feature:917391-917552:-1:exon
so has part: feature:913973-915015:-1:exon

position:927951:-1
position: 927951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927881-927951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923782-923892:-1:exon

position:923782:-1
position: 923782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923892:-1
position: 923892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:922706-922962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922455-922530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919511-919737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917391-917552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913973-915015:-1:exon

MOSPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MOSPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: motile sperm domain-containing protein 1
translation: MQQQKRQPELVEGNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYAVVDATGAVKPQCCVDIVIRHRDVRASYYGVIDKFRLQVSEQSQRKALGKKEIIATLLPSAKEQQQQKEEEEKRIKEHLTESVFFEQTLCQPENRTASSGPSLLTVFLGVVCVAALMLPTLGEMESLVPLYLHLSVNQKLVAAYVLGLITMVILRT
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(914984..915015,917391..917552,919511..919737,922455..922530,922706..922859))
location: region:914984-922859:-1
so has part: feature:922706-922859:-1:exon
so has part: feature:922455-922530:-1:exon
so has part: feature:919511-919737:-1:exon
so has part: feature:917391-917552:-1:exon
so has part: feature:914984-915015:-1:exon

XP_039428247.1
type: Protein
SIO_000068: ncbiprotein

position:914984:-1
position: 914984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922859:-1
position: 922859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922706-922859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922455-922530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919511-919737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917391-917552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914984-915015:-1:exon

MOSPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MOSPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: motile sperm domain-containing protein 1
translation: MQQQKRQPELVEGNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYAVVDATGAVKPQCCVDIVIRHRDVRASYYGVIDKFRLQVSEQSQRKALGKKEIIATLLPSAKEQQQQKEEEEKRIKEHLTESVFFEQTLCQPENRTASSGPSLLTVFLGVVCVAALMLPTLGEMESLVPLYLHLSVNQKLVAAYVLGLITMVILRT
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(914984..915015,917391..917552,919511..919737,922455..922530,922706..922859))
location: region:914984-922859:-1
so has part: feature:922706-922859:-1:exon
so has part: feature:922455-922530:-1:exon
so has part: feature:919511-919737:-1:exon
so has part: feature:917391-917552:-1:exon
so has part: feature:914984-915015:-1:exon

XP_039428248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922706-922859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922455-922530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919511-919737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917391-917552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914984-915015:-1:exon

LOC104691260
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(936799..948605)
location: region:936799-948605:-1
so has part: feature:936799-948605:-1:exon
subclass of: SO_0000011

104691260
type: Gene
SIO_000068: ncbigene

position:936799:-1
position: 936799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948605:-1
position: 948605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936799-948605:-1:exon

LOC104691260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104691260
product: uncharacterized LOC104691260
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005604721.1
SIO_010081: LOC104691260
subclass of: SO_0000673
so part of: LOC104691260
location: complement(join(936799..941702,942653..942700,945482..948605))
location: region:936799-948605:-1
so has part: feature:945482-948605:-1:exon
so has part: feature:942653-942700:-1:exon
so has part: feature:936799-941702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945482-948605:-1:exon

position:945482:-1
position: 945482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942653-942700:-1:exon

position:942653:-1
position: 942653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942700:-1
position: 942700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936799-941702:-1:exon

position:941702:-1
position: 941702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691261
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 949550..989989
location: region:949550-989989:1
so has part: feature:949550-989989:1:exon
subclass of: SO_0000010

104691261
type: Gene
SIO_000068: ncbigene

position:949550:1
position: 949550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989989:1
position: 989989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949550-989989:1:exon

LOC104691261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039571960.1
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,981869..981979,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..989989)
location: region:949550-989989:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:981869-981979:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-989989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

position:949791:1
position: 949791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

position:949878:1
position: 949878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949955:1
position: 949955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

position:967951:1
position: 967951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968100:1
position: 968100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

position:968518:1
position: 968518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968607:1
position: 968607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

position:968923:1
position: 968923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969106:1
position: 969106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

position:969996:1
position: 969996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970124:1
position: 970124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

position:971991:1
position: 971991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972154:1
position: 972154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

position:973255:1
position: 973255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973407:1
position: 973407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

position:975003:1
position: 975003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975135:1
position: 975135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

position:981016:1
position: 981016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981110:1
position: 981110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:981869-981979:1:exon

position:981869:1
position: 981869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981979:1
position: 981979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:983634-983849:1:exon

position:983634:1
position: 983634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983849:1
position: 983849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:984350-984473:1:exon

position:984350:1
position: 984350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984473:1
position: 984473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:985026-985168:1:exon

position:985026:1
position: 985026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985168:1
position: 985168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:985513-985744:1:exon

position:985513:1
position: 985513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985744:1
position: 985744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:986354-986746:1:exon

position:986354:1
position: 986354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986746:1
position: 986746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:988111-988204:1:exon

position:988111:1
position: 988111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988204:1
position: 988204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:988629-989989:1:exon

position:988629:1
position: 988629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691261
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XR_005604680.1
SIO_010081: LOC104691261
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,981869..981979,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..989005,989367..989989)
location: region:949550-989989:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:981869-981979:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-989005:1:exon
so has part: feature:989367-989989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981869-981979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983634-983849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984350-984473:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985026-985168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:985513-985744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:986354-986746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988111-988204:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988629-989005:1:exon

position:989005:1
position: 989005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:989367-989989:1:exon

position:989367:1
position: 989367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691261
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XR_005604681.1
SIO_010081: LOC104691261
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,981869..981979,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..988930,989367..989989)
location: region:949550-989989:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:981869-981979:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-988930:1:exon
so has part: feature:989367-989989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981869-981979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983634-983849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984350-984473:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985026-985168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:985513-985744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:986354-986746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988111-988204:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988629-988930:1:exon

position:988930:1
position: 988930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:989367-989989:1:exon

LOC104691261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039571961.1
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..989989)
location: region:949550-989989:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-989989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:983634-983849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:984350-984473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985026-985168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985513-985744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:986354-986746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988111-988204:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988629-989989:1:exon

LOC104691261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039571962.1
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,975332..975412,981016..981104)
location: region:949550-981104:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:975332-975412:1:exon
so has part: feature:981016-981104:1:exon

position:981104:1
position: 981104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975332-975412:1:exon

position:975332:1
position: 975332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975412:1
position: 975412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:981016-981104:1:exon

LOC104691261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691261
product: integrator complex subunit 6-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_039571963.1
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949550..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,975335..975412,981016..981104)
location: region:949550-981104:1
so has part: feature:949550-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:975335-975412:1:exon
so has part: feature:981016-981104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949550-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975335-975412:1:exon

position:975335:1
position: 975335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:981016-981104:1:exon

LOC104691261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 6-like isoform X1
translation: MPILLFLIDTSASMNQRAYLGTSYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDEPPYCIKAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLVSGIDNYGQGRNPFFLEPSILITITDGNKLTNTAGVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGAASAEPEQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKSGPDPAPIGEDGLVDSSRPINSFASQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRTAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVSSSGKYSELGHPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFDNYLKTMPPYYLLPLKKALRMMGAPNLISDNLDCGLSYSVISYLKKLSQQTKIESERIIGSVGKKVPQEIGIKVKNHSSGLSLVHSRDFKQLLQGITGESPLRLSEINVKEFAGFHIGLLNKDLKPQAFRNAYDIPRRSLLDQLTRMRTNLLKTHRLILGQDEDCLHSVPVAQMGNYQEYLKMMPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVAGPQNKIKRPGEPNTPASLKRRRSMSPLLRRPQSPPVVTNHVGGKGPPAAPGSPSYLNLKGVAANKDTSNSVVQDGNGEKKAENCQSLEKHIDGLPVQMAPVVPAAVGEDEMLPNDLDSLPVEFNCLSEDGLDHKPGTNALVRGPLNYSVSGDDQKRAMESTSESVPNSFKITPTMLEGNNADIKIKVMKEVRKPGRNYEKIFSLLEEVQGPMEIQKYFIEFAIKEAARFKKRVLIQHLERILEELDFTSPPNRVNHVNSR
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949681..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,981869..981979,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..988728)
location: region:949681-988728:1
so has part: feature:949681-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:981869-981979:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-988728:1:exon

XP_039427894.1
type: Protein
SIO_000068: ncbiprotein

position:949681:1
position: 949681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988728:1
position: 988728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949681-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981869-981979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983634-983849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984350-984473:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985026-985168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:985513-985744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:986354-986746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988111-988204:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:988629-988728:1:exon

LOC104691261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 6-like isoform X2
translation: MPILLFLIDTSASMNQRAYLGTSYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDEPPYCIKAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLVSGIDNYGQGRNPFFLEPSILITITDGNKLTNTAGVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGAASAEPEQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKSGPDPAPIGEDGLVDSSRPINSFASQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRTAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVSSSGKYSELGHPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFDNYLKTMPPYYLLTKIESERIIGSVGKKVPQEIGIKVKNHSSGLSLVHSRDFKQLLQGITGESPLRLSEINVKEFAGFHIGLLNKDLKPQAFRNAYDIPRRSLLDQLTRMRTNLLKTHRLILGQDEDCLHSVPVAQMGNYQEYLKMMPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVAGPQNKIKRPGEPNTPASLKRRRSMSPLLRRPQSPPVVTNHVGGKGPPAAPGSPSYLNLKGVAANKDTSNSVVQDGNGEKKAENCQSLEKHIDGLPVQMAPVVPAAVGEDEMLPNDLDSLPVEFNCLSEDGLDHKPGTNALVRGPLNYSVSGDDQKRAMESTSESVPNSFKITPTMLEGNNADIKIKVMKEVRKPGRNYEKIFSLLEEVQGPMEIQKYFIEFAIKEAARFKKRVLIQHLERILEELDFTSPPNRVNHVNSR
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949681..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,981016..981110,983634..983849,984350..984473,985026..985168,985513..985744,986354..986746,988111..988204,988629..988728)
location: region:949681-988728:1
so has part: feature:949681-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:981016-981110:1:exon
so has part: feature:983634-983849:1:exon
so has part: feature:984350-984473:1:exon
so has part: feature:985026-985168:1:exon
so has part: feature:985513-985744:1:exon
so has part: feature:986354-986746:1:exon
so has part: feature:988111-988204:1:exon
so has part: feature:988629-988728:1:exon

XP_039427895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:949681-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981016-981110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:983634-983849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:984350-984473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985026-985168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985513-985744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:986354-986746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988111-988204:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988629-988728:1:exon

LOC104691261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 6-like isoform X3
translation: MPILLFLIDTSASMNQRAYLGTSYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDEPPYCIKAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLVSGIDNYGQGRNPFFLEPSILITITDGNKLTNTAGVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGAASAEPEQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKSGPDPAPIGEDGLVDSSRPINSFASQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRTAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVSSSGKYSELGHPFGYLKASTTLTCVNLFVMPYNYPVLLPLLAEEESYLLPVHV
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949681..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,975332..975369)
location: region:949681-975369:1
so has part: feature:949681-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:975332-975369:1:exon

XP_039427896.1
type: Protein
SIO_000068: ncbiprotein

position:975369:1
position: 975369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949681-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975332-975369:1:exon

LOC104691261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 6-like isoform X4
translation: MPILLFLIDTSASMNQRAYLGTSYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDEPPYCIKAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLVSGIDNYGQGRNPFFLEPSILITITDGNKLTNTAGVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGAASAEPEQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKSGPDPAPIGEDGLVDSSRPINSFASQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRTAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVSSSGKYSELGHPFGYLKASTTLTCVNLFVMPYNYPVLLPLLEEESYLLPVHV
SIO_010081: LOC104691261
subclass of: SO_0000673
so part of: LOC104691261
location: join(949681..949791,949878..949955,967951..968100,968518..968607,968923..969106,969996..970124,971991..972154,973255..973407,975003..975135,975335..975369)
location: region:949681-975369:1
so has part: feature:949681-949791:1:exon
so has part: feature:949878-949955:1:exon
so has part: feature:967951-968100:1:exon
so has part: feature:968518-968607:1:exon
so has part: feature:968923-969106:1:exon
so has part: feature:969996-970124:1:exon
so has part: feature:971991-972154:1:exon
so has part: feature:973255-973407:1:exon
so has part: feature:975003-975135:1:exon
so has part: feature:975335-975369:1:exon

XP_039427897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:949681-949791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949878-949955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967951-968100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968518-968607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968923-969106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969996-970124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971991-972154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973255-973407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975003-975135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975335-975369:1:exon

MMGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MMGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(999519..1004393)
location: region:999519-1004393:-1
so has part: feature:999519-1004393:-1:exon
subclass of: SO_0000010

109145048
type: Gene
SIO_000068: ncbigene

position:999519:-1
position: 999519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004393:-1
position: 1004393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999519-1004393:-1:exon

MMGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MMGT1
product: membrane magnesium transporter 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572273.1
SIO_010081: MMGT1
subclass of: SO_0000673
so part of: MMGT1
location: complement(join(999519..1001718,1002751..1002854,1003714..1003766,1004286..1004393))
location: region:999519-1004393:-1
so has part: feature:1004286-1004393:-1:exon
so has part: feature:1003714-1003766:-1:exon
so has part: feature:1002751-1002854:-1:exon
so has part: feature:999519-1001718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004286-1004393:-1:exon

position:1004286:-1
position: 1004286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1003714-1003766:-1:exon

position:1003714:-1
position: 1003714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003766:-1
position: 1003766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002751-1002854:-1:exon

position:1002751:-1
position: 1002751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002854:-1
position: 1002854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:999519-1001718:-1:exon

position:1001718:-1
position: 1001718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MMGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MMGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane magnesium transporter 1
translation: MAAGSVWKGLVALGLFALAHAAFSAAQHRSYMRLTEKEDETLPIDIVLQTLLAFAVTCYGIAHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVLFQSPDTVNSSSNQDALSSSSALKFRKLEPLRR
SIO_010081: MMGT1
subclass of: SO_0000673
so part of: MMGT1
location: complement(join(1001556..1001718,1002751..1002854,1003714..1003766,1004286..1004367))
location: region:1001556-1004367:-1
so has part: feature:1004286-1004367:-1:exon
so has part: feature:1003714-1003766:-1:exon
so has part: feature:1002751-1002854:-1:exon
so has part: feature:1001556-1001718:-1:exon

XP_039428207.1
type: Protein
SIO_000068: ncbiprotein

position:1001556:-1
position: 1001556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004367:-1
position: 1004367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004286-1004367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1003714-1003766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002751-1002854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1001556-1001718:-1:exon

SLC9A6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC9A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1005559..1028302
location: region:1005559-1028302:1
so has part: feature:1005559-1028302:1:exon
subclass of: SO_0000010

104691334
type: Gene
SIO_000068: ncbigene

position:1005559:1
position: 1005559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028302:1
position: 1028302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005559-1028302:1:exon

SLC9A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC9A6
product: solute carrier family 9 member A6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_039572177.1
SIO_010081: SLC9A6
subclass of: SO_0000673
so part of: SLC9A6
location: join(1005559..1005835,1011801..1012000,1012355..1012432,1013077..1013153,1014056..1014168,1015728..1015833,1018664..1018805,1019030..1019135,1019360..1019448,1019654..1019767,1021340..1021451,1021828..1021981,1022149..1022179,1023383..1023462,1024077..1024182,1024982..1028302)
location: region:1005559-1028302:1
so has part: feature:1005559-1005835:1:exon
so has part: feature:1011801-1012000:1:exon
so has part: feature:1012355-1012432:1:exon
so has part: feature:1013077-1013153:1:exon
so has part: feature:1014056-1014168:1:exon
so has part: feature:1015728-1015833:1:exon
so has part: feature:1018664-1018805:1:exon
so has part: feature:1019030-1019135:1:exon
so has part: feature:1019360-1019448:1:exon
so has part: feature:1019654-1019767:1:exon
so has part: feature:1021340-1021451:1:exon
so has part: feature:1021828-1021981:1:exon
so has part: feature:1022149-1022179:1:exon
so has part: feature:1023383-1023462:1:exon
so has part: feature:1024077-1024182:1:exon
so has part: feature:1024982-1028302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1005559-1005835:1:exon

position:1005835:1
position: 1005835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011801-1012000:1:exon

position:1011801:1
position: 1011801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012000:1
position: 1012000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1012355-1012432:1:exon

position:1012355:1
position: 1012355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012432:1
position: 1012432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1013077-1013153:1:exon

position:1013077:1
position: 1013077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013153:1
position: 1013153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014056-1014168:1:exon

position:1014056:1
position: 1014056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014168:1
position: 1014168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1015728-1015833:1:exon

position:1015728:1
position: 1015728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015833:1
position: 1015833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1018664-1018805:1:exon

position:1018664:1
position: 1018664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018805:1
position: 1018805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1019030-1019135:1:exon

position:1019030:1
position: 1019030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019135:1
position: 1019135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1019360-1019448:1:exon

position:1019360:1
position: 1019360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019448:1
position: 1019448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1019654-1019767:1:exon

position:1019654:1
position: 1019654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019767:1
position: 1019767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1021340-1021451:1:exon

position:1021340:1
position: 1021340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021451:1
position: 1021451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1021828-1021981:1:exon

position:1021828:1
position: 1021828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021981:1
position: 1021981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1022149-1022179:1:exon

position:1022149:1
position: 1022149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022179:1
position: 1022179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1023383-1023462:1:exon

position:1023383:1
position: 1023383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023462:1
position: 1023462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1024077-1024182:1:exon

position:1024077:1
position: 1024077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024182:1
position: 1024182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1024982-1028302:1:exon

position:1024982:1
position: 1024982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC9A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC9A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 6
translation: MAGPGPVLAAAAGLWARGAAGAEVAAAHSGALEEEIVSEKAAEESHRQDSANLLVFILLLTLTILTIWLFKHRRARFLHETGLAMIYGVLVGVVLRYGIHVPSDVNNVTLSCQVQTSPATLLVNVSGKYYEYTLKGEISAQELNNVQDNEMLRKVTFDPEVFFNILLPPIIFYAGYSLKRRHFFRNLGSILAYAFLGTAISCLVIGSVVYGCVALMKVTGQLGGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLFGESVLNDAVAIVLSSSIVAYQPAGDNSHTFDVTAMFKSIGIFLGIFSGSFAMGAATGVVTALVTKFTKLREFPLLETGLFFLMSWSTFLLAEACGFTGVVAVLFCGITQAHYTYNNLSTESQHRTKQLFELLNFLAENFIFSYMGLALFTFQNHVFNPTFVVGAFLAIFLGRAANIYPLSFLLNLGRRNKIGTNLQHMMMFAGLRGAMAFALAIRDTATYARQMMFSTTLLIVFFTVWVFGGGTTAMLSCLNIRVGVDADQENVGVPESERRSTKAESAWLFRMWYNFDHNYLKPLLTHSGPPLTTTLPGCCGPVARCLTSPQAYENQEQLKDDDSDLILNDGDISLTYGDSTVNTDSVVPGGASRRFVGNSSEDALDRELAFGDHELVIRGTRLVLPMDDSEPPSNVLDNARHGPA
SIO_010081: SLC9A6
subclass of: SO_0000673
so part of: SLC9A6
location: join(1005574..1005835,1011801..1012000,1012355..1012432,1013077..1013153,1014056..1014168,1015728..1015833,1018664..1018805,1019030..1019135,1019360..1019448,1019654..1019767,1021340..1021451,1021828..1021981,1022149..1022179,1023383..1023462,1024077..1024182,1024982..1025257)
location: region:1005574-1025257:1
so has part: feature:1005574-1005835:1:exon
so has part: feature:1011801-1012000:1:exon
so has part: feature:1012355-1012432:1:exon
so has part: feature:1013077-1013153:1:exon
so has part: feature:1014056-1014168:1:exon
so has part: feature:1015728-1015833:1:exon
so has part: feature:1018664-1018805:1:exon
so has part: feature:1019030-1019135:1:exon
so has part: feature:1019360-1019448:1:exon
so has part: feature:1019654-1019767:1:exon
so has part: feature:1021340-1021451:1:exon
so has part: feature:1021828-1021981:1:exon
so has part: feature:1022149-1022179:1:exon
so has part: feature:1023383-1023462:1:exon
so has part: feature:1024077-1024182:1:exon
so has part: feature:1024982-1025257:1:exon

XP_039428111.1
type: Protein
SIO_000068: ncbiprotein

position:1005574:1
position: 1005574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025257:1
position: 1025257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005574-1005835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011801-1012000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1012355-1012432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013077-1013153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014056-1014168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015728-1015833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018664-1018805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019030-1019135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1019360-1019448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1019654-1019767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021340-1021451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021828-1021981:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1022149-1022179:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023383-1023462:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024077-1024182:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1024982-1025257:1:exon

FHL1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1042283..1072670
location: region:1042283-1072670:1
so has part: feature:1042283-1072670:1:exon
subclass of: SO_0000010

104691265
type: Gene
SIO_000068: ncbigene

position:1042283:1
position: 1042283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072670:1
position: 1072670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042283-1072670:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHL1
product: four and a half LIM domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_010402700.3
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1042283..1042443,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1072670)
location: region:1042283-1072670:1
so has part: feature:1042283-1042443:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1072670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042283-1042443:1:exon

position:1042443:1
position: 1042443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

position:1068197:1
position: 1068197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068381:1
position: 1068381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

position:1069363:1
position: 1069363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069540:1
position: 1069540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

position:1070039:1
position: 1070039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070208:1
position: 1070208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

position:1070758:1
position: 1070758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070944:1
position: 1070944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1072670:1:exon

position:1071698:1
position: 1071698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHL1
product: four and a half LIM domains 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010402701.3
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1042476..1042591,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1072670)
location: region:1042476-1072670:1
so has part: feature:1042476-1042591:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1072670:1:exon

position:1042476:1
position: 1042476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042476-1042591:1:exon

position:1042591:1
position: 1042591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1072670:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHL1
product: four and a half LIM domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019287757.2
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1056237..1056320,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1072670)
location: region:1056237-1072670:1
so has part: feature:1056237-1056320:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1072670:1:exon

position:1056237:1
position: 1056237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056237-1056320:1:exon

position:1056320:1
position: 1056320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1072670:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X1
translation: MGDRGGPGSYTVGTMSERFDCHYCRDPLHGKKYVQKEGRHCCVKCFEKFCANTCMECKKPIGADSKELHFKNRYWHDNCFRCFKCYTSLVNEPFMLRENNKVWCSNCTAAEDAPRCKGCFKPIIAGDQNVEYKKMVWHKDCFTCSQCKQVIGSGSFFPKGDEFYCVSCHEHKFAKTCAKCKNPITSGGLTYQEQPWHSECFICSNCKKQLGGKRFTAVEDQFYCVECYKECVAKKCAGCKNPITAGFGRGTSVVNYEDESWHDYCFKCTKCARGLANKRFVCHNGKIYCAECPKRL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1056308..1056320,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1071855)
location: region:1056308-1071855:1
so has part: feature:1056308-1056320:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1071855:1:exon

XP_019143302.1
type: Protein
SIO_000068: ncbiprotein

position:1056308:1
position: 1056308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071855:1
position: 1071855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056308-1056320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1071855:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHL1
product: four and a half LIM domains 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019287760.2
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1061017..1061122,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1072670)
location: region:1061017-1072670:1
so has part: feature:1061017-1061122:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1072670:1:exon

position:1061017:1
position: 1061017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061017-1061122:1:exon

position:1061122:1
position: 1061122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1072670:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X4
translation: MAFHRHTGGPGSYTVGTMSERFDCHYCRDPLHGKKYVQKEGRHCCVKCFEKFCANTCMECKKPIGADSKELHFKNRYWHDNCFRCFKCYTSLVNEPFMLRENNKVWCSNCTAAEDAPRCKGCFKPIIAGDQNVEYKKMVWHKDCFTCSQCKQVIGSGSFFPKGDEFYCVSCHEHKFAKTCAKCKNPITSGGLTYQEQPWHSECFICSNCKKQLGGKRFTAVEDQFYCVECYKECVAKKCAGCKNPITAGFGRGTSVVNYEDESWHDYCFKCTKCARGLANKRFVCHNGKIYCAECPKRL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1061101..1061122,1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1071855)
location: region:1061101-1071855:1
so has part: feature:1061101-1061122:1:exon
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1071855:1:exon

XP_019143305.1
type: Protein
SIO_000068: ncbiprotein

position:1061101:1
position: 1061101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061101-1061122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071698-1071855:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHL1
product: four and a half LIM domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_019287758.2
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1068197..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071701..1072670)
location: region:1068197-1072670:1
so has part: feature:1068197-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071701-1072670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068197-1068381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071701-1072670:1:exon

position:1071701:1
position: 1071701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X3
translation: MSERFDCHYCRDPLHGKKYVQKEGRHCCVKCFEKFCANTCMECKKPIGADSKELHFKNRYWHDNCFRCFKCYTSLVNEPFMLRENNKVWCSNCTAAEDAPRCKGCFKPIIAGDQNVEYKKMVWHKDCFTCSQCKQVIGSGSFFPKGDEFYCVSCHEHKFAKTCAKCKNPITSGGLTYQEQPWHSECFICSNCKKQLGGKRFTAVEDQFYCVECYKECVAKKCAGCKNPITAGFGRGTSVVNYEDESWHDYCFKCTKCARGLANKRFVCHNGKIYCAECPKRL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1068226..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1071855)
location: region:1068226-1071855:1
so has part: feature:1068226-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1071855:1:exon

XP_010401002.1
type: Protein
SIO_000068: ncbiprotein

position:1068226:1
position: 1068226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068226-1068381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071698-1071855:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X3
translation: MSERFDCHYCRDPLHGKKYVQKEGRHCCVKCFEKFCANTCMECKKPIGADSKELHFKNRYWHDNCFRCFKCYTSLVNEPFMLRENNKVWCSNCTAAEDAPRCKGCFKPIIAGDQNVEYKKMVWHKDCFTCSQCKQVIGSGSFFPKGDEFYCVSCHEHKFAKTCAKCKNPITSGGLTYQEQPWHSECFICSNCKKQLGGKRFTAVEDQFYCVECYKECVAKKCAGCKNPITAGFGRGTSVVNYEDESWHDYCFKCTKCARGLANKRFVCHNGKIYCAECPKRL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1068226..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071698..1071855)
location: region:1068226-1071855:1
so has part: feature:1068226-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071698-1071855:1:exon

XP_010401003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068226-1068381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071698-1071855:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X2
translation: MSERFDCHYCRDPLHGKKYVQKEGRHCCVKCFEKFCANTCMECKKPIGADSKELHFKNRYWHDNCFRCFKCYTSLVNEPFMLRENNKVWCSNCTAAEDAPRCKGCFKPIIAGDQNVEYKKMVWHKDCFTCSQCKQVIGSGSFFPKGDEFYCVSCHEHKFAKTCAKCKNPITSGGLTYQEQPWHSECFICSNCKKQLGGKRFTAVEDQFYCVECYKECVAKKCAGCKNPITGFGRGTSVVNYEDESWHDYCFKCTKCARGLANKRFVCHNGKIYCAECPKRL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(1068226..1068381,1069363..1069540,1070039..1070208,1070758..1070944,1071701..1071855)
location: region:1068226-1071855:1
so has part: feature:1068226-1068381:1:exon
so has part: feature:1069363-1069540:1:exon
so has part: feature:1070039-1070208:1:exon
so has part: feature:1070758-1070944:1:exon
so has part: feature:1071701-1071855:1:exon

XP_019143303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068226-1068381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069363-1069540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070039-1070208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070758-1070944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071701-1071855:1:exon

MAP7D3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1073400..1116982)
location: region:1073400-1116982:-1
so has part: feature:1073400-1116982:-1:exon
subclass of: SO_0000010

104691263
type: Gene
SIO_000068: ncbigene

position:1073400:-1
position: 1073400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116982:-1
position: 1116982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073400-1116982:-1:exon

MAP7D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MAP7D3
product: MAP7 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039572294.1
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(1073400..1074821,1076139..1076434,1077512..1077710,1078119..1078212,1078996..1079049,1079277..1079381,1080491..1080671,1081785..1081920,1086251..1086495,1087122..1087252,1087644..1087789,1089685..1089810,1090883..1090981,1091367..1091465,1093172..1093273,1097745..1097777,1098702..1098816,1101520..1101683,1103097..1103177,1104002..1104097,1116864..1116982))
location: region:1073400-1116982:-1
so has part: feature:1116864-1116982:-1:exon
so has part: feature:1104002-1104097:-1:exon
so has part: feature:1103097-1103177:-1:exon
so has part: feature:1101520-1101683:-1:exon
so has part: feature:1098702-1098816:-1:exon
so has part: feature:1097745-1097777:-1:exon
so has part: feature:1093172-1093273:-1:exon
so has part: feature:1091367-1091465:-1:exon
so has part: feature:1090883-1090981:-1:exon
so has part: feature:1089685-1089810:-1:exon
so has part: feature:1087644-1087789:-1:exon
so has part: feature:1087122-1087252:-1:exon
so has part: feature:1086251-1086495:-1:exon
so has part: feature:1081785-1081920:-1:exon
so has part: feature:1080491-1080671:-1:exon
so has part: feature:1079277-1079381:-1:exon
so has part: feature:1078996-1079049:-1:exon
so has part: feature:1078119-1078212:-1:exon
so has part: feature:1077512-1077710:-1:exon
so has part: feature:1076139-1076434:-1:exon
so has part: feature:1073400-1074821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116864-1116982:-1:exon

position:1116864:-1
position: 1116864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104002-1104097:-1:exon

position:1104002:-1
position: 1104002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104097:-1
position: 1104097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103097-1103177:-1:exon

position:1103097:-1
position: 1103097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103177:-1
position: 1103177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1101520-1101683:-1:exon

position:1101520:-1
position: 1101520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101683:-1
position: 1101683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1098702-1098816:-1:exon

position:1098702:-1
position: 1098702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098816:-1
position: 1098816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1097745-1097777:-1:exon

position:1097745:-1
position: 1097745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097777:-1
position: 1097777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1093172-1093273:-1:exon

position:1093172:-1
position: 1093172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093273:-1
position: 1093273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091367-1091465:-1:exon

position:1091367:-1
position: 1091367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091465:-1
position: 1091465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1090883-1090981:-1:exon

position:1090883:-1
position: 1090883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090981:-1
position: 1090981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1089685-1089810:-1:exon

position:1089685:-1
position: 1089685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089810:-1
position: 1089810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1087644-1087789:-1:exon

position:1087644:-1
position: 1087644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087789:-1
position: 1087789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1087122-1087252:-1:exon

position:1087122:-1
position: 1087122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087252:-1
position: 1087252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1086251-1086495:-1:exon

position:1086251:-1
position: 1086251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086495:-1
position: 1086495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1081785-1081920:-1:exon

position:1081785:-1
position: 1081785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081920:-1
position: 1081920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1080491-1080671:-1:exon

position:1080491:-1
position: 1080491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080671:-1
position: 1080671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1079277-1079381:-1:exon

position:1079277:-1
position: 1079277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079381:-1
position: 1079381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1078996-1079049:-1:exon

position:1078996:-1
position: 1078996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079049:-1
position: 1079049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1078119-1078212:-1:exon

position:1078119:-1
position: 1078119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078212:-1
position: 1078212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1077512-1077710:-1:exon

position:1077512:-1
position: 1077512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077710:-1
position: 1077710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1076139-1076434:-1:exon

position:1076139:-1
position: 1076139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076434:-1
position: 1076434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1073400-1074821:-1:exon

position:1074821:-1
position: 1074821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP7D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MAP7D3
product: MAP7 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039572293.1
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(1073400..1076434,1077512..1077710,1078119..1078212,1078996..1079049,1079277..1079381,1080491..1080671,1081785..1081920,1086251..1086495,1087122..1087252,1087644..1087789,1089685..1089810,1090883..1090981,1091367..1091465,1093172..1093273,1097745..1097777,1098702..1098816,1101520..1101683,1103097..1103177,1104002..1104097,1116864..1116982))
location: region:1073400-1116982:-1
so has part: feature:1116864-1116982:-1:exon
so has part: feature:1104002-1104097:-1:exon
so has part: feature:1103097-1103177:-1:exon
so has part: feature:1101520-1101683:-1:exon
so has part: feature:1098702-1098816:-1:exon
so has part: feature:1097745-1097777:-1:exon
so has part: feature:1093172-1093273:-1:exon
so has part: feature:1091367-1091465:-1:exon
so has part: feature:1090883-1090981:-1:exon
so has part: feature:1089685-1089810:-1:exon
so has part: feature:1087644-1087789:-1:exon
so has part: feature:1087122-1087252:-1:exon
so has part: feature:1086251-1086495:-1:exon
so has part: feature:1081785-1081920:-1:exon
so has part: feature:1080491-1080671:-1:exon
so has part: feature:1079277-1079381:-1:exon
so has part: feature:1078996-1079049:-1:exon
so has part: feature:1078119-1078212:-1:exon
so has part: feature:1077512-1077710:-1:exon
so has part: feature:1073400-1076434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116864-1116982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104002-1104097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103097-1103177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101520-1101683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098702-1098816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097745-1097777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093172-1093273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091367-1091465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1090883-1090981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089685-1089810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1087644-1087789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1087122-1087252:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086251-1086495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1081785-1081920:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1080491-1080671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1079277-1079381:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078996-1079049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078119-1078212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1077512-1077710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1073400-1076434:-1:exon

MAP7D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 3 isoform X2
translation: MAEGGAAPPFCASSSSSSLKGLREQMVAAAQAIAEERRSQSGISPLAVQTSIKTATKPVIDGSMLRTEERQRLARERREEREKQHAAKETQILEKERKAKLQYEKQLEERQRKLKEMKQKEEQRRAAVEEKRKQKIEEEKERYEAVLHRTLERNQRLETRQKRWSWGGSVTPDSEGKTEQRNTDEGGTGASKRSPSTANLKQAEAAVSKRLSSSAALLNASDRSTTKRSASLNRLNNTVPLHSQQSAPKGSQVEQKGGTEKKRSTSLSRMSSKLQSSPELEKVKKEEKPARRSQLSPLDSSVISRLLAPTQAFLARSKSAATLSADGQDPSDSHLCPRSASANSINSPVPAPKVPVRSRSIDRLKSSVSSSDASSPDSTQKSETEKPSPGSGLRRPPSPSVSARRRSPSPANLVKRPPSPSAVRQKTRPPSPGMSKQRPPSPTPVSKSAPIQRPSLTPGVINITKKKTEAESKPKDKSTEGTGQEQGASPGLERDPGAASTKTKEESGSKTVAGTTTAEEAAKILTEKRRLAREQREREDQERIQRQEEERIREEEMARRATEEKARREEELRKQEEEKRLTYEEQQRQAEEERIRREQEEQEKLAELQQQREEAEAKAQEEAERQRLERERIMQQNMQERLERKKRIEEIMKRTRKSDQNESKLQDEGKSASEVMEGEDIEEEEELGLEKTDQPGKLNGVDLVQKVKEEAEDCLETAQSMISAESEEQDESELKASEVLMNGSDLKSDEESLSVTELKDSSRPAKEMVIDDSGKLGVHETDHTIGLIQNLNGKSGSWTFEEFIDIGVHSKSTKLSSDSISAGNCNQNLNDAATIPSSPKLAFEEDGAVNSLTKPIDASSEL
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(1074814..1074821,1076139..1076434,1077512..1077710,1078119..1078212,1078996..1079049,1079277..1079381,1080491..1080671,1081785..1081920,1086251..1086495,1087122..1087252,1087644..1087789,1089685..1089810,1090883..1090981,1091367..1091465,1093172..1093273,1097745..1097777,1098702..1098816,1101520..1101683,1103097..1103177,1104002..1104097,1116864..1116942))
location: region:1074814-1116942:-1
so has part: feature:1116864-1116942:-1:exon
so has part: feature:1104002-1104097:-1:exon
so has part: feature:1103097-1103177:-1:exon
so has part: feature:1101520-1101683:-1:exon
so has part: feature:1098702-1098816:-1:exon
so has part: feature:1097745-1097777:-1:exon
so has part: feature:1093172-1093273:-1:exon
so has part: feature:1091367-1091465:-1:exon
so has part: feature:1090883-1090981:-1:exon
so has part: feature:1089685-1089810:-1:exon
so has part: feature:1087644-1087789:-1:exon
so has part: feature:1087122-1087252:-1:exon
so has part: feature:1086251-1086495:-1:exon
so has part: feature:1081785-1081920:-1:exon
so has part: feature:1080491-1080671:-1:exon
so has part: feature:1079277-1079381:-1:exon
so has part: feature:1078996-1079049:-1:exon
so has part: feature:1078119-1078212:-1:exon
so has part: feature:1077512-1077710:-1:exon
so has part: feature:1076139-1076434:-1:exon
so has part: feature:1074814-1074821:-1:exon

XP_039428228.1
type: Protein
SIO_000068: ncbiprotein

position:1074814:-1
position: 1074814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116942:-1
position: 1116942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116864-1116942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104002-1104097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103097-1103177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101520-1101683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098702-1098816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097745-1097777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093172-1093273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091367-1091465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1090883-1090981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089685-1089810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1087644-1087789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1087122-1087252:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086251-1086495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1081785-1081920:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1080491-1080671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1079277-1079381:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078996-1079049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078119-1078212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1077512-1077710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1076139-1076434:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1074814-1074821:-1:exon

MAP7D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 3 isoform X1
translation: MAEGGAAPPFCASSSSSSLKGLREQMVAAAQAIAEERRSQSGISPLAVQTSIKTATKPVIDGSMLRTEERQRLARERREEREKQHAAKETQILEKERKAKLQYEKQLEERQRKLKEMKQKEEQRRAAVEEKRKQKIEEEKERYEAVLHRTLERNQRLETRQKRWSWGGSVTPDSEGKTEQRNTDEGGTGASKRSPSTANLKQAEAAVSKRLSSSAALLNASDRSTTKRSASLNRLNNTVPLHSQQSAPKGSQVEQKGGTEKKRSTSLSRMSSKLQSSPELEKVKKEEKPARRSQLSPLDSSVISRLLAPTQAFLARSKSAATLSADGQDPSDSHLCPRSASANSINSPVPAPKVPVRSRSIDRLKSSVSSSDASSPDSTQKSETEKPSPGSGLRRPPSPSVSARRRSPSPANLVKRPPSPSAVRQKTRPPSPGMSKQRPPSPTPVSKSAPIQRPSLTPGVINITKKKTEAESKPKDKSTEGTGQEQGASPGLERDPGAASTKTKEESGSKTVAGTTTAEEAAKILTEKRRLAREQREREDQERIQRQEEERIREEEMARRATEEKARREEELRKQEEEKRLTYEEQQRQAEEERIRREQEEQEKLAELQQQREEAEAKAQEEAERQRLERERIMQQNMQERLERKKRIEEIMKRTRKSDQNESKLQDEGKSASEVMEGEDIEEEEELGLEKTDQPGKLNGVDLVQKVKEEAEDCLETAQSMISAESEEQDESELKASEVLMNGSDLKSDEESLSVTELKDSSRPAKEMVIDDSGKLGVHETDHTIGLIQNLNGKSGSWTFEEFIDIGVHSKSTKLSSDSISAGNCNQNLNDAATIPSSPKLAFEEDGAVNSLTKPIDASSGNPS
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(1076125..1076434,1077512..1077710,1078119..1078212,1078996..1079049,1079277..1079381,1080491..1080671,1081785..1081920,1086251..1086495,1087122..1087252,1087644..1087789,1089685..1089810,1090883..1090981,1091367..1091465,1093172..1093273,1097745..1097777,1098702..1098816,1101520..1101683,1103097..1103177,1104002..1104097,1116864..1116942))
location: region:1076125-1116942:-1
so has part: feature:1116864-1116942:-1:exon
so has part: feature:1104002-1104097:-1:exon
so has part: feature:1103097-1103177:-1:exon
so has part: feature:1101520-1101683:-1:exon
so has part: feature:1098702-1098816:-1:exon
so has part: feature:1097745-1097777:-1:exon
so has part: feature:1093172-1093273:-1:exon
so has part: feature:1091367-1091465:-1:exon
so has part: feature:1090883-1090981:-1:exon
so has part: feature:1089685-1089810:-1:exon
so has part: feature:1087644-1087789:-1:exon
so has part: feature:1087122-1087252:-1:exon
so has part: feature:1086251-1086495:-1:exon
so has part: feature:1081785-1081920:-1:exon
so has part: feature:1080491-1080671:-1:exon
so has part: feature:1079277-1079381:-1:exon
so has part: feature:1078996-1079049:-1:exon
so has part: feature:1078119-1078212:-1:exon
so has part: feature:1077512-1077710:-1:exon
so has part: feature:1076125-1076434:-1:exon

XP_039428227.1
type: Protein
SIO_000068: ncbiprotein

position:1076125:-1
position: 1076125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116864-1116942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104002-1104097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103097-1103177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101520-1101683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098702-1098816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097745-1097777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093172-1093273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091367-1091465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1090883-1090981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089685-1089810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1087644-1087789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1087122-1087252:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086251-1086495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1081785-1081920:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1080491-1080671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1079277-1079381:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078996-1079049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078119-1078212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1077512-1077710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1076125-1076434:-1:exon

LOC120412045
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120412045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1076428..1080459
location: region:1076428-1080459:1
so has part: feature:1076428-1080459:1:exon
subclass of: SO_0000011

120412045
type: Gene
SIO_000068: ncbigene

position:1076428:1
position: 1076428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080459:1
position: 1080459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076428-1080459:1:exon

LOC120412045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120412045
product: uncharacterized LOC120412045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_005604717.1
SIO_010081: LOC120412045
subclass of: SO_0000673
so part of: LOC120412045
location: join(1076428..1076664,1076764..1080459)
location: region:1076428-1080459:1
so has part: feature:1076428-1076664:1:exon
so has part: feature:1076764-1080459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076428-1076664:1:exon

position:1076664:1
position: 1076664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1076764-1080459:1:exon

position:1076764:1
position: 1076764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109145029
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1116998..1118891
location: region:1116998-1118891:1
so has part: feature:1116998-1118891:1:exon
subclass of: SO_0000011

109145029
type: Gene
SIO_000068: ncbigene

position:1116998:1
position: 1116998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118891:1
position: 1118891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116998-1118891:1:exon

LOC109145029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145029
product: uncharacterized LOC109145029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002046151.2
SIO_010081: LOC109145029
subclass of: SO_0000673
so part of: LOC109145029
location: join(1116998..1117788,1118566..1118891)
location: region:1116998-1118891:1
so has part: feature:1116998-1117788:1:exon
so has part: feature:1118566-1118891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116998-1117788:1:exon

position:1117788:1
position: 1117788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1118566-1118891:1:exon

position:1118566:1
position: 1118566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZC4H2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZC4H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1136112..1151038)
location: region:1136112-1151038:-1
so has part: feature:1136112-1151038:-1:exon
subclass of: SO_0000010

104691266
type: Gene
SIO_000068: ncbigene

position:1136112:-1
position: 1136112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151038:-1
position: 1151038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136112-1151038:-1:exon

ZC4H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZC4H2
product: zinc finger C4H2-type containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_039572092.1
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1136112..1140410,1141546..1141708,1142847..1143019,1144259..1144430,1150886..1151038))
location: region:1136112-1151038:-1
so has part: feature:1150886-1151038:-1:exon
so has part: feature:1144259-1144430:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1136112-1140410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150886-1151038:-1:exon

position:1150886:-1
position: 1150886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1144259-1144430:-1:exon

position:1144259:-1
position: 1144259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144430:-1
position: 1144430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142847-1143019:-1:exon

position:1142847:-1
position: 1142847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143019:-1
position: 1143019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1141546-1141708:-1:exon

position:1141546:-1
position: 1141546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141708:-1
position: 1141708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1136112-1140410:-1:exon

position:1140410:-1
position: 1140410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZC4H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZC4H2
product: zinc finger C4H2-type containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_039572091.1
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1136112..1140410,1141546..1141708,1142847..1143019,1144259..1144430,1150009..1150060,1150886..1151038))
location: region:1136112-1151038:-1
so has part: feature:1150886-1151038:-1:exon
so has part: feature:1150009-1150060:-1:exon
so has part: feature:1144259-1144430:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1136112-1140410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150886-1151038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150009-1150060:-1:exon

position:1150009:-1
position: 1150009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150060:-1
position: 1150060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1144259-1144430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142847-1143019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141546-1141708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136112-1140410:-1:exon

ZC4H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZC4H2
product: zinc finger C4H2-type containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_010402703.4
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1136112..1140410,1141546..1141708,1142847..1143019,1144259..1144430,1147349..1147611))
location: region:1136112-1147611:-1
so has part: feature:1147349-1147611:-1:exon
so has part: feature:1144259-1144430:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1136112-1140410:-1:exon

position:1147611:-1
position: 1147611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147349-1147611:-1:exon

position:1147349:-1
position: 1147349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1144259-1144430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142847-1143019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141546-1141708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136112-1140410:-1:exon

ZC4H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZC4H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger C4H2 domain-containing protein isoform X1
translation: MTKSRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLESTRRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKPKRKQDE
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1140297..1140410,1141546..1141708,1142847..1143019,1144259..1144430,1150009..1150022))
location: region:1140297-1150022:-1
so has part: feature:1150009-1150022:-1:exon
so has part: feature:1144259-1144430:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1140297-1140410:-1:exon

XP_039428025.1
type: Protein
SIO_000068: ncbiprotein

position:1140297:-1
position: 1140297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150022:-1
position: 1150022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150009-1150022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1144259-1144430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142847-1143019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141546-1141708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140297-1140410:-1:exon

ZC4H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZC4H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger C4H2 domain-containing protein isoform X3
translation: MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLESTRRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKPKRKQDE
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1140297..1140410,1141546..1141708,1142847..1143019,1144259..1144430,1147349..1147401))
location: region:1140297-1147401:-1
so has part: feature:1147349-1147401:-1:exon
so has part: feature:1144259-1144430:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1140297-1140410:-1:exon

XP_010401005.1
type: Protein
SIO_000068: ncbiprotein

position:1147401:-1
position: 1147401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147349-1147401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1144259-1144430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142847-1143019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141546-1141708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140297-1140410:-1:exon

ZC4H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZC4H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger C4H2 domain-containing protein isoform X2
translation: MEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLESTRRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKPKRKQDE
SIO_010081: ZC4H2
subclass of: SO_0000673
so part of: ZC4H2
location: complement(join(1140297..1140410,1141546..1141708,1142847..1143019,1144259..1144414))
location: region:1140297-1144414:-1
so has part: feature:1144259-1144414:-1:exon
so has part: feature:1142847-1143019:-1:exon
so has part: feature:1141546-1141708:-1:exon
so has part: feature:1140297-1140410:-1:exon

XP_039428026.1
type: Protein
SIO_000068: ncbiprotein

position:1144414:-1
position: 1144414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144259-1144414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142847-1143019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141546-1141708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140297-1140410:-1:exon

ZC3H12B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZC3H12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150653..1175518
location: region:1150653-1175518:1
so has part: feature:1150653-1175518:1:exon
subclass of: SO_0000010

104691268
type: Gene
SIO_000068: ncbigene

position:1150653:1
position: 1150653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175518:1
position: 1175518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150653-1175518:1:exon

ZC3H12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZC3H12B
product: zinc finger CCCH-type containing 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_039572088.1
SIO_010081: ZC3H12B
subclass of: SO_0000673
so part of: ZC3H12B
location: join(1150653..1150943,1166193..1166958,1169784..1169923,1170637..1170871,1170959..1171065,1171625..1175518)
location: region:1150653-1175518:1
so has part: feature:1150653-1150943:1:exon
so has part: feature:1166193-1166958:1:exon
so has part: feature:1169784-1169923:1:exon
so has part: feature:1170637-1170871:1:exon
so has part: feature:1170959-1171065:1:exon
so has part: feature:1171625-1175518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150653-1150943:1:exon

position:1150943:1
position: 1150943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1166193-1166958:1:exon

position:1166193:1
position: 1166193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166958:1
position: 1166958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169784-1169923:1:exon

position:1169784:1
position: 1169784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169923:1
position: 1169923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1170637-1170871:1:exon

position:1170637:1
position: 1170637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170871:1
position: 1170871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1170959-1171065:1:exon

position:1170959:1
position: 1170959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171065:1
position: 1171065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1171625-1175518:1:exon

position:1171625:1
position: 1171625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZC3H12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZC3H12B
product: zinc finger CCCH-type containing 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039572089.1
SIO_010081: ZC3H12B
subclass of: SO_0000673
so part of: ZC3H12B
location: join(1151231..1151442,1166193..1166958,1169784..1169923,1170637..1170871,1170959..1171065,1171625..1175518)
location: region:1151231-1175518:1
so has part: feature:1151231-1151442:1:exon
so has part: feature:1166193-1166958:1:exon
so has part: feature:1169784-1169923:1:exon
so has part: feature:1170637-1170871:1:exon
so has part: feature:1170959-1171065:1:exon
so has part: feature:1171625-1175518:1:exon

position:1151231:1
position: 1151231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151231-1151442:1:exon

position:1151442:1
position: 1151442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1166193-1166958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169784-1169923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170637-1170871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170959-1171065:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1171625-1175518:1:exon

ZC3H12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZC3H12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ribonuclease ZC3H12B
translation: MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSTQWREKEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQAVLNKLGADALINDVLAELVRLGNKSESEGQSTASSTSSTLVPRGPCPKEIASPELSLEDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAAGALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGDHGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLYLGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLHAQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
SIO_010081: ZC3H12B
subclass of: SO_0000673
so part of: ZC3H12B
location: join(1166357..1166958,1169784..1169923,1170637..1170871,1170959..1171065,1171625..1173045)
location: region:1166357-1173045:1
so has part: feature:1166357-1166958:1:exon
so has part: feature:1169784-1169923:1:exon
so has part: feature:1170637-1170871:1:exon
so has part: feature:1170959-1171065:1:exon
so has part: feature:1171625-1173045:1:exon

XP_039428022.1
type: Protein
SIO_000068: ncbiprotein

position:1166357:1
position: 1166357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173045:1
position: 1173045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166357-1166958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1169784-1169923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170637-1170871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170959-1171065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1171625-1173045:1:exon

ZC3H12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZC3H12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ribonuclease ZC3H12B
translation: MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSTQWREKEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQAVLNKLGADALINDVLAELVRLGNKSESEGQSTASSTSSTLVPRGPCPKEIASPELSLEDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAAGALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGDHGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLYLGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLHAQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
SIO_010081: ZC3H12B
subclass of: SO_0000673
so part of: ZC3H12B
location: join(1166357..1166958,1169784..1169923,1170637..1170871,1170959..1171065,1171625..1173045)
location: region:1166357-1173045:1
so has part: feature:1166357-1166958:1:exon
so has part: feature:1169784-1169923:1:exon
so has part: feature:1170637-1170871:1:exon
so has part: feature:1170959-1171065:1:exon
so has part: feature:1171625-1173045:1:exon

XP_039428023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1166357-1166958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1169784-1169923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170637-1170871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170959-1171065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1171625-1173045:1:exon

LAS1L
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LAS1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1177584..1192087)
location: region:1177584-1192087:-1
so has part: feature:1177584-1192087:-1:exon
subclass of: SO_0000010

104691335
type: Gene
SIO_000068: ncbigene

position:1177584:-1
position: 1177584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192087:-1
position: 1192087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177584-1192087:-1:exon

LAS1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LAS1L
product: LAS1 like ribosome biogenesis factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572090.1
SIO_010081: LAS1L
subclass of: SO_0000673
so part of: LAS1L
location: complement(join(1177584..1179349,1181898..1182039,1182957..1183336,1183916..1184051,1185254..1185469,1186372..1186457,1187152..1187261,1187634..1187680,1188276..1188470,1189538..1189619,1190819..1190888,1191085..1191210,1191859..1192087))
location: region:1177584-1192087:-1
so has part: feature:1191859-1192087:-1:exon
so has part: feature:1191085-1191210:-1:exon
so has part: feature:1190819-1190888:-1:exon
so has part: feature:1189538-1189619:-1:exon
so has part: feature:1188276-1188470:-1:exon
so has part: feature:1187634-1187680:-1:exon
so has part: feature:1187152-1187261:-1:exon
so has part: feature:1186372-1186457:-1:exon
so has part: feature:1185254-1185469:-1:exon
so has part: feature:1183916-1184051:-1:exon
so has part: feature:1182957-1183336:-1:exon
so has part: feature:1181898-1182039:-1:exon
so has part: feature:1177584-1179349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1191859-1192087:-1:exon

position:1191859:-1
position: 1191859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1191085-1191210:-1:exon

position:1191085:-1
position: 1191085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191210:-1
position: 1191210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1190819-1190888:-1:exon

position:1190819:-1
position: 1190819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190888:-1
position: 1190888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1189538-1189619:-1:exon

position:1189538:-1
position: 1189538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189619:-1
position: 1189619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188276-1188470:-1:exon

position:1188276:-1
position: 1188276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188470:-1
position: 1188470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1187634-1187680:-1:exon

position:1187634:-1
position: 1187634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187680:-1
position: 1187680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1187152-1187261:-1:exon

position:1187152:-1
position: 1187152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187261:-1
position: 1187261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1186372-1186457:-1:exon

position:1186372:-1
position: 1186372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186457:-1
position: 1186457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1185254-1185469:-1:exon

position:1185254:-1
position: 1185254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185469:-1
position: 1185469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1183916-1184051:-1:exon

position:1183916:-1
position: 1183916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184051:-1
position: 1184051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1182957-1183336:-1:exon

position:1182957:-1
position: 1182957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183336:-1
position: 1183336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1181898-1182039:-1:exon

position:1181898:-1
position: 1181898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182039:-1
position: 1182039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1177584-1179349:-1:exon

position:1179349:-1
position: 1179349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAS1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LAS1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal biogenesis protein LAS1L
translation: MSGRAGPGWRRGRPSSCPARRRLKPLRTVVAWRGRAEWDQVMVGLYCGDSRLQQDALDRVSAWKSRYGPKMPLAVDCTAELIRCKVLDSSGRLKSHELILSYGLALVRFVNLITERKQKMVSIPLRQLAREVDIPIWVVDLRHELTHGKLPRLALCRKGCDVVLDWLRKMYWSRQLGNNLCEESEDEDEEEQEEVEANAELDSDGWEIQTPQHEARQKHKEFHEKVRDVLISYKNEQFRVMQTMQSVSKSRELWSDSSSEVDWILAQIKDLMQENRETVAEALLSDGFLIPKMDCLKMLNIKYEANKEVWQFKIPPTFYCFWQPLLSGLLSRSFTQILIEKMFIELKECSDSSELRPQFLINWISELLTGIAKVNAGKKRQHCNKQVSVKELFLHKVPLQWIRLTDSCLEAPCWATPHLLQLILTIMRPRLPRSSRKNLLYLASIYTEGGAPLSSPGLSSDGSEQPIYTIESLQWRARQENQVKNQGQTVEKQEDVLERDDGVEEVEEEEEEMVTETNPLEGLAHSGNMVAIAEKRAALQGSAWQITADEVRWKDFPLGKLPGQTDDPDGLMLDNYSMMSLLDQPVRDEWKSLNTNSAELNIPMTGGLLWTQNDFHKIKSGLQLF
SIO_010081: LAS1L
subclass of: SO_0000673
so part of: LAS1L
location: complement(join(1179259..1179349,1181898..1182039,1182957..1183336,1183916..1184051,1185254..1185469,1186372..1186457,1187152..1187261,1187634..1187680,1188276..1188470,1189538..1189619,1190819..1190888,1191085..1191210,1191859..1192055))
location: region:1179259-1192055:-1
so has part: feature:1191859-1192055:-1:exon
so has part: feature:1191085-1191210:-1:exon
so has part: feature:1190819-1190888:-1:exon
so has part: feature:1189538-1189619:-1:exon
so has part: feature:1188276-1188470:-1:exon
so has part: feature:1187634-1187680:-1:exon
so has part: feature:1187152-1187261:-1:exon
so has part: feature:1186372-1186457:-1:exon
so has part: feature:1185254-1185469:-1:exon
so has part: feature:1183916-1184051:-1:exon
so has part: feature:1182957-1183336:-1:exon
so has part: feature:1181898-1182039:-1:exon
so has part: feature:1179259-1179349:-1:exon

XP_039428024.1
type: Protein
SIO_000068: ncbiprotein

position:1179259:-1
position: 1179259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192055:-1
position: 1192055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191859-1192055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191085-1191210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190819-1190888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189538-1189619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188276-1188470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187634-1187680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187152-1187261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1186372-1186457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185254-1185469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183916-1184051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1182957-1183336:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1181898-1182039:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1179259-1179349:-1:exon

MSN
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1216058..1259277
location: region:1216058-1259277:1
so has part: feature:1216058-1259277:1:exon
subclass of: SO_0000010

104691269
type: Gene
SIO_000068: ncbigene

position:1216058:1
position: 1216058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259277:1
position: 1259277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216058-1259277:1:exon

MSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MSN
product: moesin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572011.1
SIO_010081: MSN
subclass of: SO_0000673
so part of: MSN
location: join(1216058..1216193,1239009..1239092,1248641..1248736,1249264..1249538,1250010..1250093,1250438..1250584,1251058..1251154,1252211..1252374,1252841..1252971,1253615..1253775,1254278..1254370,1254784..1255017,1256059..1259277)
location: region:1216058-1259277:1
so has part: feature:1216058-1216193:1:exon
so has part: feature:1239009-1239092:1:exon
so has part: feature:1248641-1248736:1:exon
so has part: feature:1249264-1249538:1:exon
so has part: feature:1250010-1250093:1:exon
so has part: feature:1250438-1250584:1:exon
so has part: feature:1251058-1251154:1:exon
so has part: feature:1252211-1252374:1:exon
so has part: feature:1252841-1252971:1:exon
so has part: feature:1253615-1253775:1:exon
so has part: feature:1254278-1254370:1:exon
so has part: feature:1254784-1255017:1:exon
so has part: feature:1256059-1259277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1216058-1216193:1:exon

position:1216193:1
position: 1216193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1239009-1239092:1:exon

position:1239009:1
position: 1239009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239092:1
position: 1239092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1248641-1248736:1:exon

position:1248641:1
position: 1248641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248736:1
position: 1248736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1249264-1249538:1:exon

position:1249264:1
position: 1249264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249538:1
position: 1249538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1250010-1250093:1:exon

position:1250010:1
position: 1250010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250093:1
position: 1250093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1250438-1250584:1:exon

position:1250438:1
position: 1250438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250584:1
position: 1250584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1251058-1251154:1:exon

position:1251058:1
position: 1251058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251154:1
position: 1251154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1252211-1252374:1:exon

position:1252211:1
position: 1252211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252374:1
position: 1252374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1252841-1252971:1:exon

position:1252841:1
position: 1252841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252971:1
position: 1252971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1253615-1253775:1:exon

position:1253615:1
position: 1253615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253775:1
position: 1253775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1254278-1254370:1:exon

position:1254278:1
position: 1254278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254370:1
position: 1254370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1254784-1255017:1:exon

position:1254784:1
position: 1254784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255017:1
position: 1255017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1256059-1259277:1:exon

position:1256059:1
position: 1256059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: moesin
translation: MPKTISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLKLNKKVTAQDVRKESPLLFKFRAKFYPEDVAEELIQDITQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQSKYGDFNKDVHKSGYLASDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMIREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERALLENEKKKRELAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQEEAEKLAKERREAEEAKEALLRASHDQQKTQEQLAAEMAELTARITQLELARQKKESEAQEWQYKAQRVQEDLEKTKEELKTAMSTPHVTEPMHSENEHDDEQDENAAEASAELRSEATIKDRSEEERTTEAEKNERVQKHLKALSSELANARDETKKTANDMIHAENMRLGRDKYKTLRQIRQGNTKQRIDEFESM
SIO_010081: MSN
subclass of: SO_0000673
so part of: MSN
location: join(1216182..1216193,1239009..1239092,1248641..1248736,1249264..1249538,1250010..1250093,1250438..1250584,1251058..1251154,1252211..1252374,1252841..1252971,1253615..1253775,1254278..1254370,1254784..1255017,1256059..1256223)
location: region:1216182-1256223:1
so has part: feature:1216182-1216193:1:exon
so has part: feature:1239009-1239092:1:exon
so has part: feature:1248641-1248736:1:exon
so has part: feature:1249264-1249538:1:exon
so has part: feature:1250010-1250093:1:exon
so has part: feature:1250438-1250584:1:exon
so has part: feature:1251058-1251154:1:exon
so has part: feature:1252211-1252374:1:exon
so has part: feature:1252841-1252971:1:exon
so has part: feature:1253615-1253775:1:exon
so has part: feature:1254278-1254370:1:exon
so has part: feature:1254784-1255017:1:exon
so has part: feature:1256059-1256223:1:exon

XP_039427945.1
type: Protein
SIO_000068: ncbiprotein

position:1216182:1
position: 1216182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256223:1
position: 1256223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216182-1216193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239009-1239092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248641-1248736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249264-1249538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1250010-1250093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1250438-1250584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251058-1251154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1252211-1252374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1252841-1252971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1253615-1253775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1254278-1254370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1254784-1255017:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1256059-1256223:1:exon

LOC104691270
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1267252..1271899
location: region:1267252-1271899:1
so has part: feature:1267252-1271899:1:exon
subclass of: SO_0000010

104691270
type: Gene
SIO_000068: ncbigene

position:1267252:1
position: 1267252
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1271899:1
position: 1271899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267252-1271899:1:exon

LOC104691270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691270
product: uncharacterized LOC104691270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010402707.4
SIO_010081: LOC104691270
subclass of: SO_0000673
so part of: LOC104691270
location: join(<1267252..1267655,1270181..1270305,1270727..1270856,1271113..1271899)
location: region:1267252-1271899:1
so has part: feature:1267252-1267655:1:exon
so has part: feature:1270181-1270305:1:exon
so has part: feature:1270727-1270856:1:exon
so has part: feature:1271113-1271899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267252-1267655:1:exon

position:1267655:1
position: 1267655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1270181-1270305:1:exon

position:1270181:1
position: 1270181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270305:1
position: 1270305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1270727-1270856:1:exon

position:1270727:1
position: 1270727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270856:1
position: 1270856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271113-1271899:1:exon

position:1271113:1
position: 1271113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104691270
translation: GLQQDPGTIPLSIFPSCFPSLLPPSAPREAVLLFSFFFFFFPSPSILPSCTFKSLIKLSLHQRTAQETRSGAHSSRMAHSILGLMRPLWSGLNVSKIRLIYLCGVTEQHHSPAKWWSERGFSSTNGFQDAPGESSSEDQVTVHFINRDGERLTTTAKEGESLLEVVVNQNLAIDGFGACEGTLACSTCHLIFDRDTFQKLDAISDEELDMLDLAYGLTDTSRLGCQVCIKKSMDGLTVRVPMDVSDMRRQLEVGKQSKQ
SIO_010081: LOC104691270
subclass of: SO_0000673
so part of: LOC104691270
location: join(<1267252..1267655,1270181..1270305,1270727..1270856,1271113..1271233)
location: region:1267252-1271233:1
so has part: feature:1267252-1267655:1:exon
so has part: feature:1270181-1270305:1:exon
so has part: feature:1270727-1270856:1:exon
so has part: feature:1271113-1271233:1:exon

XP_010401009.3
type: Protein
SIO_000068: ncbiprotein

position:1271233:1
position: 1271233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267252-1267655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1270181-1270305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1270727-1270856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271113-1271233:1:exon

LOC104691271
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1274854..1305554)
location: region:1274854-1305554:-1
so has part: feature:1274854-1305554:-1:exon
subclass of: SO_0000010

104691271
type: Gene
SIO_000068: ncbigene

position:1274854:-1
position: 1274854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305554:-1
position: 1305554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274854-1305554:-1:exon

LOC104691271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691271
product: rho GTPase-activating protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039572134.1
SIO_010081: LOC104691271
subclass of: SO_0000673
so part of: LOC104691271
location: complement(join(1274854..1278551,1279089..1279206,1279805..1279994,1280923..1281032,1282128..1282289,1282819..1282994,1283728..1283916,1285190..1285256,1285439..1285516,1286391..1286475,1287206..1287247,1287763..1287912,1288430..1288600,1291323..1291405,1305454..1305554))
location: region:1274854-1305554:-1
so has part: feature:1305454-1305554:-1:exon
so has part: feature:1291323-1291405:-1:exon
so has part: feature:1288430-1288600:-1:exon
so has part: feature:1287763-1287912:-1:exon
so has part: feature:1287206-1287247:-1:exon
so has part: feature:1286391-1286475:-1:exon
so has part: feature:1285439-1285516:-1:exon
so has part: feature:1285190-1285256:-1:exon
so has part: feature:1283728-1283916:-1:exon
so has part: feature:1282819-1282994:-1:exon
so has part: feature:1282128-1282289:-1:exon
so has part: feature:1280923-1281032:-1:exon
so has part: feature:1279805-1279994:-1:exon
so has part: feature:1279089-1279206:-1:exon
so has part: feature:1274854-1278551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305454-1305554:-1:exon

position:1305454:-1
position: 1305454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291323-1291405:-1:exon

position:1291323:-1
position: 1291323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291405:-1
position: 1291405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1288430-1288600:-1:exon

position:1288430:-1
position: 1288430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288600:-1
position: 1288600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287763-1287912:-1:exon

position:1287763:-1
position: 1287763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287912:-1
position: 1287912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1287206-1287247:-1:exon

position:1287206:-1
position: 1287206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287247:-1
position: 1287247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1286391-1286475:-1:exon

position:1286391:-1
position: 1286391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286475:-1
position: 1286475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1285439-1285516:-1:exon

position:1285439:-1
position: 1285439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285516:-1
position: 1285516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1285190-1285256:-1:exon

position:1285190:-1
position: 1285190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285256:-1
position: 1285256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1283728-1283916:-1:exon

position:1283728:-1
position: 1283728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283916:-1
position: 1283916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1282819-1282994:-1:exon

position:1282819:-1
position: 1282819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282994:-1
position: 1282994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1282128-1282289:-1:exon

position:1282128:-1
position: 1282128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282289:-1
position: 1282289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1280923-1281032:-1:exon

position:1280923:-1
position: 1280923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281032:-1
position: 1281032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1279805-1279994:-1:exon

position:1279805:-1
position: 1279805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279994:-1
position: 1279994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1279089-1279206:-1:exon

position:1279089:-1
position: 1279089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279206:-1
position: 1279206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1274854-1278551:-1:exon

position:1278551:-1
position: 1278551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 20-like
translation: MKPIVQRRRSTSSAITKALGKSKSHSRETILSSSHSDNGLPSGVFSSPGSTFILDERVQLTVGLQTQERHLILFSDMLVIAKSKSSSSLKLKKQVHLSEVWTGTCLSEVTEKKMSPENSFVIGWPITNYVVTFSSADVKERWLSVLLWHINEVKQNEYLKNLTLQIFVLDDDNCSSTTAVNVSNVETAESVMKKTLLQLGLPGRTSEHHLWVVSGKDEPAYPLIGHEHPFSIALSCLRDSADQQQRTNNNTLLADGTEASFLTQLPKEKQCQFVLKPRLQALMQLRRESLQKHTKRKKSLIDWALRRSTSTPTGSPPSQSPTTPQKLFGLSLSSVCPDGILPKPIMDMLLLLYHEGPSTRGIFRRSANAKTCKELKEKLNSGDDVQVDGESVFVAAAVITDFLRNIPDSVLSSDMHGLWMEAVDTENRAHKIEAIKSLVNQLPEANLILLRHLFGVLHHIEQNSGVNQMNAFNLALCIAPNMLWLPSPTGPEEESRSTKKVALLVQFLIENSGEIFGGDIASLFQRPDKKKSKNSAESLDIGLAQHDDSSDELEFSICDPVGPKHHLESETDAMFEPPSSLLLDEDQEDWDLFSEITACYQSKARTNASADSYELLEEDGSFCSLGSIRSLSPARDRCSSEPSVCLSSQLPAQSHEPVARQSSCDATIMSSHTDYIHRLRQLQMESQKLIDEGLSPGVNMARQNLWQSPQTTSRVKQLSLQKSSLSNRSSFSSLSSTTTSPSASSLSSLDSAFSYCSESSAISPTDVSSLPFMFGTSARLHAVSPTATKRSQKEWHKSFTSPVPLHLCNLDSFQKDEPKAGENSHCSGEQKSFPCVSTAAMGSPFTDIDWEEEERQLSCSGCPGPGLRSQDCTKEFEQHPEFPAASPSSETSPQVSHQQHREKTVKNIEIKGIDDCPLSQESLKRTKITFYVAPNKESSWGSQVGEEERSVTNTSSRDPPSSSSEQSLSKSLQTVRVHIPQTVFYGQNTPLVLQSISRRYHHKPTVPSLQAEHRESPQSASAPKELERQPVEMAQAPPQSKGFDTFSHTIRIILPDSIRNTIKEYFKHDETEPCPPAEVEAVEKELLRSRVEWLRSQPLAEVTAEEHDTAVFAEETFV
SIO_010081: LOC104691271
subclass of: SO_0000673
so part of: LOC104691271
location: complement(join(1276813..1278551,1279089..1279206,1279805..1279994,1280923..1281032,1282128..1282289,1282819..1282994,1283728..1283916,1285190..1285256,1285439..1285516,1286391..1286475,1287206..1287247,1287763..1287912,1288430..1288600,1291323..1291402))
location: region:1276813-1291402:-1
so has part: feature:1291323-1291402:-1:exon
so has part: feature:1288430-1288600:-1:exon
so has part: feature:1287763-1287912:-1:exon
so has part: feature:1287206-1287247:-1:exon
so has part: feature:1286391-1286475:-1:exon
so has part: feature:1285439-1285516:-1:exon
so has part: feature:1285190-1285256:-1:exon
so has part: feature:1283728-1283916:-1:exon
so has part: feature:1282819-1282994:-1:exon
so has part: feature:1282128-1282289:-1:exon
so has part: feature:1280923-1281032:-1:exon
so has part: feature:1279805-1279994:-1:exon
so has part: feature:1279089-1279206:-1:exon
so has part: feature:1276813-1278551:-1:exon

XP_039428068.1
type: Protein
SIO_000068: ncbiprotein

position:1276813:-1
position: 1276813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291402:-1
position: 1291402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291323-1291402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288430-1288600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287763-1287912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287206-1287247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286391-1286475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285439-1285516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1285190-1285256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1283728-1283916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282819-1282994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282128-1282289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1280923-1281032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1279805-1279994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279089-1279206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1276813-1278551:-1:exon

LOC109145023
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1336211..1340785
location: region:1336211-1340785:1
so has part: feature:1336211-1340785:1:exon
subclass of: SO_0000011

109145023
type: Gene
SIO_000068: ncbigene

position:1336211:1
position: 1336211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340785:1
position: 1340785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336211-1340785:1:exon

LOC109145023
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145023
product: uncharacterized LOC109145023, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005604649.1
SIO_010081: LOC109145023
subclass of: SO_0000673
so part of: LOC109145023
location: join(1336211..1336331,1339732..1340785)
location: region:1336211-1340785:1
so has part: feature:1336211-1336331:1:exon
so has part: feature:1339732-1340785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336211-1336331:1:exon

position:1336331:1
position: 1336331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339732-1340785:1:exon

position:1339732:1
position: 1339732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109145023
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145023
product: uncharacterized LOC109145023, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005604648.1
SIO_010081: LOC109145023
subclass of: SO_0000673
so part of: LOC109145023
location: join(1336245..1336331,1337654..1337730,1339732..1340785)
location: region:1336245-1340785:1
so has part: feature:1336245-1336331:1:exon
so has part: feature:1337654-1337730:1:exon
so has part: feature:1339732-1340785:1:exon

position:1336245:1
position: 1336245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336245-1336331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337654-1337730:1:exon

position:1337654:1
position: 1337654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337730:1
position: 1337730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1339732-1340785:1:exon

LOC104691336
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1343136..1350301)
location: region:1343136-1350301:-1
so has part: feature:1343136-1350301:-1:exon
subclass of: SO_0000010

104691336
type: Gene
SIO_000068: ncbigene

position:1343136:-1
position: 1343136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350301:-1
position: 1350301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343136-1350301:-1:exon

LOC104691336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691336
product: V-set and immunoglobulin domain-containing protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039572216.1
SIO_010081: LOC104691336
subclass of: SO_0000673
so part of: LOC104691336
location: complement(join(1343136..1344039,1344855..1344876,1345158..1345280,1346508..1346615,1347545..1347825,1348345..1348351,1348465..1348821,1350164..1350301))
location: region:1343136-1350301:-1
so has part: feature:1350164-1350301:-1:exon
so has part: feature:1348465-1348821:-1:exon
so has part: feature:1348345-1348351:-1:exon
so has part: feature:1347545-1347825:-1:exon
so has part: feature:1346508-1346615:-1:exon
so has part: feature:1345158-1345280:-1:exon
so has part: feature:1344855-1344876:-1:exon
so has part: feature:1343136-1344039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350164-1350301:-1:exon

position:1350164:-1
position: 1350164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1348465-1348821:-1:exon

position:1348465:-1
position: 1348465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348821:-1
position: 1348821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1348345-1348351:-1:exon

position:1348345:-1
position: 1348345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348351:-1
position: 1348351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1347545-1347825:-1:exon

position:1347545:-1
position: 1347545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347825:-1
position: 1347825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1346508-1346615:-1:exon

position:1346508:-1
position: 1346508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346615:-1
position: 1346615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1345158-1345280:-1:exon

position:1345158:-1
position: 1345158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345280:-1
position: 1345280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1344855-1344876:-1:exon

position:1344855:-1
position: 1344855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344876:-1
position: 1344876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1343136-1344039:-1:exon

position:1344039:-1
position: 1344039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 4
translation: MGEVGRIVVFGMTFISCNALLDLSGVHQVTGTWMGSITVPCTYVPSEGFTQQTLSWSVERDSSTSTIFRRDDSGDHILLSKFRGRVSIPKQSPGNASLLIENLEMPDSGHYTCQVIWRSTDNSLITREVTTTVKVVKDWGGSHKPIIRAGQLGLTVPAGASTSLTCEASGSPPISYRWFRSVPAGKAVLLSSGAELAWHSLRPSDSGTYFCEAENRAGAGAVQRSDAVQLTVTDLPTTTVALQRNVATTGGHHSTTGRGESSDMELTVTGSPRVAPSPLLYGPAAALGGAALGALLALGLGCWRRRRRKEEPLYEVAFRSTAEVALLHTEVEVPVKCLHEETCSNTEKTTMKDRKGPEYENLVTAMESQYEREGI
SIO_010081: LOC104691336
subclass of: SO_0000673
so part of: LOC104691336
location: complement(join(1343865..1344039,1344855..1344876,1345158..1345280,1346508..1346615,1347545..1347825,1348345..1348351,1348465..1348821,1350164..1350218))
location: region:1343865-1350218:-1
so has part: feature:1350164-1350218:-1:exon
so has part: feature:1348465-1348821:-1:exon
so has part: feature:1348345-1348351:-1:exon
so has part: feature:1347545-1347825:-1:exon
so has part: feature:1346508-1346615:-1:exon
so has part: feature:1345158-1345280:-1:exon
so has part: feature:1344855-1344876:-1:exon
so has part: feature:1343865-1344039:-1:exon

XP_039428150.1
type: Protein
SIO_000068: ncbiprotein

position:1343865:-1
position: 1343865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350218:-1
position: 1350218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350164-1350218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1348465-1348821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348345-1348351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347545-1347825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1346508-1346615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345158-1345280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1344855-1344876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1343865-1344039:-1:exon

LOC104691272
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1353345..1366846)
location: region:1353345-1366846:-1
so has part: feature:1353345-1366846:-1:exon
subclass of: SO_0000010

104691272
type: Gene
SIO_000068: ncbigene

position:1353345:-1
position: 1353345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366846:-1
position: 1366846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353345-1366846:-1:exon

LOC104691272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691272
product: V-set and immunoglobulin domain-containing protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039571939.1
SIO_010081: LOC104691272
subclass of: SO_0000673
so part of: LOC104691272
location: complement(join(1353345..1355899,1357025..1357046,1358263..1358376,1359094..1359162,1359471..1359548,1360216..1360290,1361217..1361498,1362083..1362439,1363361..1363624,1365611..1366846))
location: region:1353345-1366846:-1
so has part: feature:1365611-1366846:-1:exon
so has part: feature:1363361-1363624:-1:exon
so has part: feature:1362083-1362439:-1:exon
so has part: feature:1361217-1361498:-1:exon
so has part: feature:1360216-1360290:-1:exon
so has part: feature:1359471-1359548:-1:exon
so has part: feature:1359094-1359162:-1:exon
so has part: feature:1358263-1358376:-1:exon
so has part: feature:1357025-1357046:-1:exon
so has part: feature:1353345-1355899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1365611-1366846:-1:exon

position:1365611:-1
position: 1365611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363361-1363624:-1:exon

position:1363361:-1
position: 1363361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363624:-1
position: 1363624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362083-1362439:-1:exon

position:1362083:-1
position: 1362083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362439:-1
position: 1362439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1361217-1361498:-1:exon

position:1361217:-1
position: 1361217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361498:-1
position: 1361498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1360216-1360290:-1:exon

position:1360216:-1
position: 1360216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360290:-1
position: 1360290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1359471-1359548:-1:exon

position:1359471:-1
position: 1359471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359548:-1
position: 1359548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1359094-1359162:-1:exon

position:1359094:-1
position: 1359094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359162:-1
position: 1359162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1358263-1358376:-1:exon

position:1358263:-1
position: 1358263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358376:-1
position: 1358376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1357025-1357046:-1:exon

position:1357025:-1
position: 1357025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357046:-1
position: 1357046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1353345-1355899:-1:exon

position:1355899:-1
position: 1355899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 4-like
translation: METLLRVAVLVSSLLHCSAFLDLSGPSEVRGVWRGSITLPCAYVPVEYLVQQTLTWTVVHDKGSGTIIRRDGSDDHILLSEYRDRVSIPKDAPGNVSLLILNLEVSDRGTYTCQVTWKDSNNSLIAKEITTKLEVVKVAATKPIIRAGQLGLTVPAGASTSLTCEASGSPPISYRWFRSVPAGKAVLLSSGAELAWHSLRPSDSGTYFCEAENRAGAGAVQRSDAVQLTVTDLPTTTVALQRNVATTGGHHSTTGRGKTQTELVSQGTPGIFWTPWGSTTTADLSITATTSESGVGYPGKNDTIHDFQRTGLSLYLVILIAVVCGAVVFLVISLIICVTKPKEAQVYDVKSRNLRAATSSSRDSTGYYEEPISSTENNYVMEPRENKISEEVNKNVSDCAGNPQESEYEVGDTS
SIO_010081: LOC104691272
subclass of: SO_0000673
so part of: LOC104691272
location: complement(join(1355707..1355899,1357025..1357046,1358263..1358376,1359094..1359162,1359471..1359548,1360216..1360290,1361217..1361498,1362083..1362439,1363361..1363415))
location: region:1355707-1363415:-1
so has part: feature:1363361-1363415:-1:exon
so has part: feature:1362083-1362439:-1:exon
so has part: feature:1361217-1361498:-1:exon
so has part: feature:1360216-1360290:-1:exon
so has part: feature:1359471-1359548:-1:exon
so has part: feature:1359094-1359162:-1:exon
so has part: feature:1358263-1358376:-1:exon
so has part: feature:1357025-1357046:-1:exon
so has part: feature:1355707-1355899:-1:exon

XP_039427873.1
type: Protein
SIO_000068: ncbiprotein

position:1355707:-1
position: 1355707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363415:-1
position: 1363415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363361-1363415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362083-1362439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1361217-1361498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360216-1360290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359471-1359548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359094-1359162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358263-1358376:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357025-1357046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1355707-1355899:-1:exon

LOC104691337
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1366943..1382803)
location: region:1366943-1382803:-1
so has part: feature:1366943-1382803:-1:exon
subclass of: SO_0000010

104691337
type: Gene
SIO_000068: ncbigene

position:1366943:-1
position: 1366943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382803:-1
position: 1382803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366943-1382803:-1:exon

LOC104691337
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691337
product: heat shock factor protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039571938.1
SIO_010081: LOC104691337
subclass of: SO_0000673
so part of: LOC104691337
location: complement(join(1366943..1369467,1370073..1370139,1370984..1371049,1371603..1371708,1372993..1373238,1374033..1374166,1374456..1374537,1374974..1375035,1375701..1375776,1376639..1376763,1379621..1379748,1381402..1381510,1382643..1382803))
location: region:1366943-1382803:-1
so has part: feature:1382643-1382803:-1:exon
so has part: feature:1381402-1381510:-1:exon
so has part: feature:1379621-1379748:-1:exon
so has part: feature:1376639-1376763:-1:exon
so has part: feature:1375701-1375776:-1:exon
so has part: feature:1374974-1375035:-1:exon
so has part: feature:1374456-1374537:-1:exon
so has part: feature:1374033-1374166:-1:exon
so has part: feature:1372993-1373238:-1:exon
so has part: feature:1371603-1371708:-1:exon
so has part: feature:1370984-1371049:-1:exon
so has part: feature:1370073-1370139:-1:exon
so has part: feature:1366943-1369467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382643-1382803:-1:exon

position:1382643:-1
position: 1382643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381402-1381510:-1:exon

position:1381402:-1
position: 1381402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381510:-1
position: 1381510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1379621-1379748:-1:exon

position:1379621:-1
position: 1379621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379748:-1
position: 1379748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1376639-1376763:-1:exon

position:1376639:-1
position: 1376639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376763:-1
position: 1376763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1375701-1375776:-1:exon

position:1375701:-1
position: 1375701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375776:-1
position: 1375776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1374974-1375035:-1:exon

position:1374974:-1
position: 1374974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375035:-1
position: 1375035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1374456-1374537:-1:exon

position:1374456:-1
position: 1374456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374537:-1
position: 1374537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1374033-1374166:-1:exon

position:1374033:-1
position: 1374033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374166:-1
position: 1374166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1372993-1373238:-1:exon

position:1372993:-1
position: 1372993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373238:-1
position: 1373238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1371603-1371708:-1:exon

position:1371603:-1
position: 1371603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371708:-1
position: 1371708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1370984-1371049:-1:exon

position:1370984:-1
position: 1370984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371049:-1
position: 1371049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1370073-1370139:-1:exon

position:1370073:-1
position: 1370073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370139:-1
position: 1370139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1366943-1369467:-1:exon

position:1369467:-1
position: 1369467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691337
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 3-like
translation: MREAPALPRGPAAPAAPAPGPVPVPGFLAKLWALLEDPDSDDVICWSRNGENFCILDEQRFAKELLPKYFKHNNISSFIRQLNMYGFRKVIALENGIITAEKSSVIEFQHPFFKQGKAHLLENIKRKVSAVRTEDLKVCTEDLHKVLSEVQEMREQQNNMDVRLANMKRENKALWKEVAVLRQKHSQQQKLLSKILQFILSLMRGNYIVGVKRKRSLTDAAGASPSKYSRQYVRIPVESGQAMAFSEHSADEEDGNGTGLIIRDITDTLENATNGLLAVAHTSGRAREPQAALDPGLPLCQVSQPSELNCAEPVPSVPINDVSKSGETGTAAVELHTAQPNAPEDPVSVIDSILNENNSGNQNDPLLDREEIQDFLNCIDASLEELQAMLSGKQYNFGAEAFSDTFNPELPALDMSLMETPPGMENMANLAESTEGLGASERETSGSKDMQLIQYRANPLLSLFEELPSGEAAGKVDDQKDFLLPSLEEKPALQPPSASETVVPLAAPASQAEPLDALGMGDPPLLPEDGNGEYKLFPLLLLSPVANFIDEASEIEIS
SIO_010081: LOC104691337
subclass of: SO_0000673
so part of: LOC104691337
location: complement(join(1369136..1369467,1370073..1370139,1370984..1371049,1371603..1371708,1372993..1373238,1374033..1374166,1374456..1374537,1374974..1375035,1375701..1375776,1376639..1376763,1379621..1379748,1381402..1381510,1382643..1382786))
location: region:1369136-1382786:-1
so has part: feature:1382643-1382786:-1:exon
so has part: feature:1381402-1381510:-1:exon
so has part: feature:1379621-1379748:-1:exon
so has part: feature:1376639-1376763:-1:exon
so has part: feature:1375701-1375776:-1:exon
so has part: feature:1374974-1375035:-1:exon
so has part: feature:1374456-1374537:-1:exon
so has part: feature:1374033-1374166:-1:exon
so has part: feature:1372993-1373238:-1:exon
so has part: feature:1371603-1371708:-1:exon
so has part: feature:1370984-1371049:-1:exon
so has part: feature:1370073-1370139:-1:exon
so has part: feature:1369136-1369467:-1:exon

XP_039427872.1
type: Protein
SIO_000068: ncbiprotein

position:1369136:-1
position: 1369136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382786:-1
position: 1382786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382643-1382786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1381402-1381510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1379621-1379748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376639-1376763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375701-1375776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1374974-1375035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374456-1374537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374033-1374166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372993-1373238:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1371603-1371708:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1370984-1371049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1370073-1370139:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1369136-1369467:-1:exon

HEPH
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1382877..1409720
location: region:1382877-1409720:1
so has part: feature:1382877-1409720:1:exon
subclass of: SO_0000010

104691273
type: Gene
SIO_000068: ncbigene

position:1382877:1
position: 1382877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409720:1
position: 1409720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382877-1409720:1:exon

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039572125.1
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1382877..1383059,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401442..1401483,1401731..1401809)
location: region:1382877-1401809:1
so has part: feature:1382877-1383059:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401442-1401483:1:exon
so has part: feature:1401731-1401809:1:exon

position:1401809:1
position: 1401809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382877-1383059:1:exon

position:1383059:1
position: 1383059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

position:1386238:1
position: 1386238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386434:1
position: 1386434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

position:1388557:1
position: 1388557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388801:1
position: 1388801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

position:1389249:1
position: 1389249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389461:1
position: 1389461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

position:1390042:1
position: 1390042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390221:1
position: 1390221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

position:1390567:1
position: 1390567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390821:1
position: 1390821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

position:1391330:1
position: 1391330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391498:1
position: 1391498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

position:1392662:1
position: 1392662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392801:1
position: 1392801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

position:1393596:1
position: 1393596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393727:1
position: 1393727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

position:1393830:1
position: 1393830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394041:1
position: 1394041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

position:1395692:1
position: 1395692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395842:1
position: 1395842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

position:1396161:1
position: 1396161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396373:1
position: 1396373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

position:1396716:1
position: 1396716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396926:1
position: 1396926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

position:1397191:1
position: 1397191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397330:1
position: 1397330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

position:1398228:1
position: 1398228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398359:1
position: 1398359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

position:1399252:1
position: 1399252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399358:1
position: 1399358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

position:1400108:1
position: 1400108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400330:1
position: 1400330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1401442-1401483:1:exon

position:1401442:1
position: 1401442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401483:1
position: 1401483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1401731-1401809:1:exon

position:1401731:1
position: 1401731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039572124.1
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1382878..1383059,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402147..1402238)
location: region:1382878-1402238:1
so has part: feature:1382878-1383059:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402147-1402238:1:exon

position:1382878:1
position: 1382878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402238:1
position: 1402238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382878-1383059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1401731-1401870:1:exon

position:1401870:1
position: 1401870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1402147-1402238:1:exon

position:1402147:1
position: 1402147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039572121.1
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1382880..1383059,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1409720)
location: region:1382880-1409720:1
so has part: feature:1382880-1383059:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1409720:1:exon

position:1382880:1
position: 1382880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382880-1383059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1402245-1402407:1:exon

position:1402245:1
position: 1402245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402407:1
position: 1402407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1403097-1403129:1:exon

position:1403097:1
position: 1403097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403129:1
position: 1403129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1404640-1409720:1:exon

position:1404640:1
position: 1404640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039572122.1
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1383268..1383432,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1409720)
location: region:1383268-1409720:1
so has part: feature:1383268-1383432:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1409720:1:exon

position:1383268:1
position: 1383268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383268-1383432:1:exon

position:1383432:1
position: 1383432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1404640-1409720:1:exon

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010402711.4
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1383440..1383699,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1409720)
location: region:1383440-1409720:1
so has part: feature:1383440-1383699:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1409720:1:exon

position:1383440:1
position: 1383440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383440-1383699:1:exon

position:1383699:1
position: 1383699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1404640-1409720:1:exon

HEPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HEPH
product: hephaestin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010402712.4
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1383440..1383626,1386238..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1409720)
location: region:1383440-1409720:1
so has part: feature:1383440-1383626:1:exon
so has part: feature:1386238-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1409720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383440-1383626:1:exon

position:1383626:1
position: 1383626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386238-1386434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1404640-1409720:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X1
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHAINGRLYANLPGLIMYQGEWVSWYLLGMGHEIDVHTVHFHAETFIYKNGKSYRADVVDLFPGTFEMVEMLVGNPGTWLLHCHVSDHIHAGMEILFTVLPRTESELEVVSVTPGLSHDDESQKMMLFGSKVTQEQIEATVISLAVVGVLLLLAAGVLLGAVIHLEKQKRLRRNRRSILDDGFKLMSQKNSGL
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1404878)
location: region:1386274-1404878:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1404878:1:exon

XP_039428055.1
type: Protein
SIO_000068: ncbiprotein

position:1386274:1
position: 1386274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404878:1
position: 1404878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1404640-1404878:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X1
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHAINGRLYANLPGLIMYQGEWVSWYLLGMGHEIDVHTVHFHAETFIYKNGKSYRADVVDLFPGTFEMVEMLVGNPGTWLLHCHVSDHIHAGMEILFTVLPRTESELEVVSVTPGLSHDDESQKMMLFGSKVTQEQIEATVISLAVVGVLLLLAAGVLLGAVIHLEKQKRLRRNRRSILDDGFKLMSQKNSGL
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1404878)
location: region:1386274-1404878:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1404878:1:exon

XP_010401013.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1404640-1404878:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X1
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHAINGRLYANLPGLIMYQGEWVSWYLLGMGHEIDVHTVHFHAETFIYKNGKSYRADVVDLFPGTFEMVEMLVGNPGTWLLHCHVSDHIHAGMEILFTVLPRTESELEVVSVTPGLSHDDESQKMMLFGSKVTQEQIEATVISLAVVGVLLLLAAGVLLGAVIHLEKQKRLRRNRRSILDDGFKLMSQKNSGL
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1404878)
location: region:1386274-1404878:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1404878:1:exon

XP_039428056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1404640-1404878:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X1
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHAINGRLYANLPGLIMYQGEWVSWYLLGMGHEIDVHTVHFHAETFIYKNGKSYRADVVDLFPGTFEMVEMLVGNPGTWLLHCHVSDHIHAGMEILFTVLPRTESELEVVSVTPGLSHDDESQKMMLFGSKVTQEQIEATVISLAVVGVLLLLAAGVLLGAVIHLEKQKRLRRNRRSILDDGFKLMSQKNSGL
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402245..1402407,1403097..1403129,1404640..1404878)
location: region:1386274-1404878:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402245-1402407:1:exon
so has part: feature:1403097-1403129:1:exon
so has part: feature:1404640-1404878:1:exon

XP_010401014.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1402245-1402407:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1403097-1403129:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1404640-1404878:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X2
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHAINGRLYANLPGLIMYQGEWVSWYLLGMGHEIDVHTVHFHAETFIYKL
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401731..1401870,1402147..1402152)
location: region:1386274-1402152:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401731-1401870:1:exon
so has part: feature:1402147-1402152:1:exon

XP_039428058.1
type: Protein
SIO_000068: ncbiprotein

position:1402152:1
position: 1402152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401731-1401870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1402147-1402152:1:exon

HEPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HEPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hephaestin isoform X3
translation: MGSVWCLLLCIPMLSPTFAGGVTRVYYLGIHEVNWNYAPVGRNVLANQSIAHDRQASAFLQSGKDRVGSMYKKSVYKQYTDSTYTTEIPKPGWLGFLGPVIRAEVGDTIKVHLKNFATRPYTIHPHGVFYEKDSEGSLYPDMSPQDQKKDDAVFPGRNYTYTWTVPEDHSPTADDPNCLTWIYHSHIDAPRDIASGLIGPLLTCKKGILTGSSQRRKDVDVDFFLMFSVVDENLSWYLDENIASFCTDPGSVDKEDEEFQESNKMHAINGYVFGNLPELTMCAGDDVSWHLFGMGNEIDVHTAYFHGEALNIRGHRTDVASLFPATFVTADMIPSNPGRWLLSCQVNDHLQAGMGALYEVRPCSRQAPAPTLKGRVRKYYIAAKEVQWDYGPSGLDQISGEQLSDAGSPAEQYFKRSLYRIGGVYWKAKYVEYTDESFREEKQQSEEEKHLGILGPVIKAEVGDTILVTFFNKASWPFSIQPHGVFYGKASEGTWYHDGLSQSGVSVAPLHNFTYRWTVPRHVGPTSSDPPCLTWMYSSAVNPIKDSSSGLVGPLLICKSGTLDDNNKQKGIDKEFYLLFNVFDENLSWYLNANIKYYLRMEETSVKKDDAFEESNRMHAINGLMFGNLPGLNVCEGDKVSWHLLGLGSEADVHGAVFQGNTIQMNGMRRDSANLFPHTFATAFMQPDNSGSFEIYCQTSNHYQSGMREQYIVSKCGKAGTASAHRYTGVRTFYIAAEEVVWDYAPDRTWERERHNHSAQSYADVFLNNENGLLGSRYKKAVYREYTDGTFQTPKARINGDEHLGILGPFLWAEVGDILNVVFKNNASRPYSIHAHGVLEQQTGHPQAANPGDIVTYRWEIPERSGPGPNDSACVPWIYYSTVDPVKDMYSGLIGPLKVCRRGTLRSGGTRKDIKREFALLFLVFDENQSWYLEENVERFSKGNHEINLLDEKFVESNKMHEATTSAG
SIO_010081: HEPH
subclass of: SO_0000673
so part of: HEPH
location: join(1386274..1386434,1388557..1388801,1389249..1389461,1390042..1390221,1390567..1390821,1391330..1391498,1392662..1392801,1393596..1393727,1393830..1394041,1395692..1395842,1396161..1396373,1396716..1396926,1397191..1397330,1398228..1398359,1399252..1399358,1400108..1400330,1401442..1401464)
location: region:1386274-1401464:1
so has part: feature:1386274-1386434:1:exon
so has part: feature:1388557-1388801:1:exon
so has part: feature:1389249-1389461:1:exon
so has part: feature:1390042-1390221:1:exon
so has part: feature:1390567-1390821:1:exon
so has part: feature:1391330-1391498:1:exon
so has part: feature:1392662-1392801:1:exon
so has part: feature:1393596-1393727:1:exon
so has part: feature:1393830-1394041:1:exon
so has part: feature:1395692-1395842:1:exon
so has part: feature:1396161-1396373:1:exon
so has part: feature:1396716-1396926:1:exon
so has part: feature:1397191-1397330:1:exon
so has part: feature:1398228-1398359:1:exon
so has part: feature:1399252-1399358:1:exon
so has part: feature:1400108-1400330:1:exon
so has part: feature:1401442-1401464:1:exon

XP_039428059.1
type: Protein
SIO_000068: ncbiprotein

position:1401464:1
position: 1401464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386274-1386434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388557-1388801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389249-1389461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390042-1390221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390567-1390821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391330-1391498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392662-1392801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393596-1393727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393830-1394041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395692-1395842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396161-1396373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396716-1396926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397191-1397330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398228-1398359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399252-1399358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400108-1400330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401442-1401464:1:exon

LOC104691274
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1423817..1431525
location: region:1423817-1431525:1
so has part: feature:1423817-1431525:1:exon
subclass of: SO_0000010

104691274
type: Gene
SIO_000068: ncbigene

position:1423817:1
position: 1423817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431525:1
position: 1431525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423817-1431525:1:exon

LOC104691274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691274
product: probable G-protein coupled receptor 83
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010402715.4
SIO_010081: LOC104691274
subclass of: SO_0000673
so part of: LOC104691274
location: join(1423817..1424299,1425919..1426044,1427421..1427554,1428062..1431525)
location: region:1423817-1431525:1
so has part: feature:1423817-1424299:1:exon
so has part: feature:1425919-1426044:1:exon
so has part: feature:1427421-1427554:1:exon
so has part: feature:1428062-1431525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423817-1424299:1:exon

position:1424299:1
position: 1424299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1425919-1426044:1:exon

position:1425919:1
position: 1425919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426044:1
position: 1426044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427421-1427554:1:exon

position:1427421:1
position: 1427421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427554:1
position: 1427554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428062-1431525:1:exon

position:1428062:1
position: 1428062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 83
translation: MRQHTWFPLPYMPKPFWRAENHNTTNFFSALYGFPNQSFFHSDLNLEDLGDFGSGAKYEGESQSRTVKALLIVAYSVIICISLFGNILVCHVVIKNKMMHSATNLFIVNLAVADVMITTLNTPFTLVRFVSSTWVFGKLMCHISRFVQYCSVHVSVLTLAAIALDRHQVIMHPLKPRMSMVTGGICIIVIWVMASCFSLPHAIYQTLTRFYIGNSTIRMVCLPSFPPPADLFWKYLDLTTFVLLYVLPLLVISITYTMVAKKLWLRNAIGDLTMEQYYAHQRKKKMTLKMLMVVVVVFAVCWFPLNCYVVLISCRAIHSSNALYFAFHWFAMSSTCYNPFIYCWLNGSFRAELRSLLCVCRPRSMAQGHALQPISPPFQDAKAENCWHKRSSTCQKAQTPSQRNSAKTDISSVHPIVAES
SIO_010081: LOC104691274
subclass of: SO_0000673
so part of: LOC104691274
location: join(1423922..1424299,1425919..1426044,1427421..1427554,1428062..1428686)
location: region:1423922-1428686:1
so has part: feature:1423922-1424299:1:exon
so has part: feature:1425919-1426044:1:exon
so has part: feature:1427421-1427554:1:exon
so has part: feature:1428062-1428686:1:exon

XP_010401017.2
type: Protein
SIO_000068: ncbiprotein

position:1423922:1
position: 1423922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428686:1
position: 1428686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423922-1424299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1425919-1426044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427421-1427554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428062-1428686:1:exon

LOC109145020
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1447920..1452458
location: region:1447920-1452458:1
so has part: feature:1447920-1452458:1:exon
subclass of: SO_0000011

109145020
type: Gene
SIO_000068: ncbigene

position:1447920:1
position: 1447920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452458:1
position: 1452458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447920-1452458:1:exon

LOC109145020
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145020
product: uncharacterized LOC109145020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_002046142.2
SIO_010081: LOC109145020
subclass of: SO_0000673
so part of: LOC109145020
location: join(1447920..1448643,1448920..1449059,1450075..1452458)
location: region:1447920-1452458:1
so has part: feature:1447920-1448643:1:exon
so has part: feature:1448920-1449059:1:exon
so has part: feature:1450075-1452458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1447920-1448643:1:exon

position:1448643:1
position: 1448643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1448920-1449059:1:exon

position:1448920:1
position: 1448920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449059:1
position: 1449059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1450075-1452458:1:exon

position:1450075:1
position: 1450075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691275
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1455534..1467255
location: region:1455534-1467255:1
so has part: feature:1455534-1467255:1:exon
subclass of: SO_0000010

104691275
type: Gene
SIO_000068: ncbigene

position:1455534:1
position: 1455534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467255:1
position: 1467255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455534-1467255:1:exon

LOC104691275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691275
product: probable G-protein coupled receptor 83, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010402716.4
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1455534..1455688,1455861..1456492,1457266..1457391,1458053..1458186,1461347..1467255)
location: region:1455534-1467255:1
so has part: feature:1455534-1455688:1:exon
so has part: feature:1455861-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1467255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455534-1455688:1:exon

position:1455688:1
position: 1455688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1455861-1456492:1:exon

position:1455861:1
position: 1455861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456492:1
position: 1456492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457266-1457391:1:exon

position:1457266:1
position: 1457266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457391:1
position: 1457391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1458053-1458186:1:exon

position:1458053:1
position: 1458053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458186:1
position: 1458186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1461347-1467255:1:exon

position:1461347:1
position: 1461347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691275
product: probable G-protein coupled receptor 83, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010402718.4
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1455534..1455688,1455861..1456137,1456222..1456492,1457266..1457391,1458053..1458186,1461347..1467255)
location: region:1455534-1467255:1
so has part: feature:1455534-1455688:1:exon
so has part: feature:1455861-1456137:1:exon
so has part: feature:1456222-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1467255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455534-1455688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1455861-1456137:1:exon

position:1456137:1
position: 1456137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1456222-1456492:1:exon

position:1456222:1
position: 1456222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1457266-1457391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1458053-1458186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1461347-1467255:1:exon

LOC104691275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691275
product: probable G-protein coupled receptor 83, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010402717.4
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1455534..1455688,1455906..1456492,1457266..1457391,1458053..1458186,1461347..1467255)
location: region:1455534-1467255:1
so has part: feature:1455534-1455688:1:exon
so has part: feature:1455906-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1467255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455534-1455688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1455906-1456492:1:exon

position:1455906:1
position: 1455906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457266-1457391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1458053-1458186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1461347-1467255:1:exon

LOC104691275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 83 isoform X1
translation: MSRSLLQPYRSQVMGFLGEFDHYSSLAKLMSIYHTTNRTIFNWTESRIVEWEKFAELAKYEPESQKPTVKALLIVAYSVIIVMSLFGNMLVCHVVLKNKRMHSATSLFIANLAVSDIMITLLNTPFTLVRFVNSTWIFGKAMCHISRFVQYCSLHVSTLTLTAIALDRHQVILNPLKQRMSLTKGALSISVIWLMATCFSLPHAIYQKLFQYNYREATVRSLCLPDFPEPAELVWKYLDLSTFLLLYLLPLLIITVTYMRLAKKLWLRNAIGDITTQQYVTHHRNKKKSIKMLMLVVVVFAICWFPLNCYVVLISSLGIKTKNSLYFALHWFAMSSTCYNPFIYCWLNENFRAELRSLLCICQKAPQAQDQVLPPRAMSCREAWVEQTRCRKGPASQARCSTGNLPMANTDL
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1456109..1456492,1457266..1457391,1458053..1458186,1461347..1461941)
location: region:1456109-1461941:1
so has part: feature:1456109-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1461941:1:exon

XP_010401018.1
type: Protein
SIO_000068: ncbiprotein

position:1456109:1
position: 1456109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461941:1
position: 1461941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456109-1456492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1457266-1457391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1458053-1458186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1461347-1461941:1:exon

LOC104691275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 83 isoform X1
translation: MSRSLLQPYRSQVMGFLGEFDHYSSLAKLMSIYHTTNRTIFNWTESRIVEWEKFAELAKYEPESQKPTVKALLIVAYSVIIVMSLFGNMLVCHVVLKNKRMHSATSLFIANLAVSDIMITLLNTPFTLVRFVNSTWIFGKAMCHISRFVQYCSLHVSTLTLTAIALDRHQVILNPLKQRMSLTKGALSISVIWLMATCFSLPHAIYQKLFQYNYREATVRSLCLPDFPEPAELVWKYLDLSTFLLLYLLPLLIITVTYMRLAKKLWLRNAIGDITTQQYVTHHRNKKKSIKMLMLVVVVFAICWFPLNCYVVLISSLGIKTKNSLYFALHWFAMSSTCYNPFIYCWLNENFRAELRSLLCICQKAPQAQDQVLPPRAMSCREAWVEQTRCRKGPASQARCSTGNLPMANTDL
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1456109..1456492,1457266..1457391,1458053..1458186,1461347..1461941)
location: region:1456109-1461941:1
so has part: feature:1456109-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1461941:1:exon

XP_010401019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1456109-1456492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1457266-1457391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1458053-1458186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1461347-1461941:1:exon

LOC104691275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 83 isoform X2
translation: MSRSLLQPYRTIFNWTESRIVEWEKFAELAKYEPESQKPTVKALLIVAYSVIIVMSLFGNMLVCHVVLKNKRMHSATSLFIANLAVSDIMITLLNTPFTLVRFVNSTWIFGKAMCHISRFVQYCSLHVSTLTLTAIALDRHQVILNPLKQRMSLTKGALSISVIWLMATCFSLPHAIYQKLFQYNYREATVRSLCLPDFPEPAELVWKYLDLSTFLLLYLLPLLIITVTYMRLAKKLWLRNAIGDITTQQYVTHHRNKKKSIKMLMLVVVVFAICWFPLNCYVVLISSLGIKTKNSLYFALHWFAMSSTCYNPFIYCWLNENFRAELRSLLCICQKAPQAQDQVLPPRAMSCREAWVEQTRCRKGPASQARCSTGNLPMANTDL
SIO_010081: LOC104691275
subclass of: SO_0000673
so part of: LOC104691275
location: join(1456109..1456137,1456222..1456492,1457266..1457391,1458053..1458186,1461347..1461941)
location: region:1456109-1461941:1
so has part: feature:1456109-1456137:1:exon
so has part: feature:1456222-1456492:1:exon
so has part: feature:1457266-1457391:1:exon
so has part: feature:1458053-1458186:1:exon
so has part: feature:1461347-1461941:1:exon

XP_010401020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1456109-1456137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456222-1456492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1457266-1457391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1458053-1458186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1461347-1461941:1:exon

EDA2R
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EDA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1471850..1485448)
location: region:1471850-1485448:-1
so has part: feature:1471850-1485448:-1:exon
subclass of: SO_0000010

104691276
type: Gene
SIO_000068: ncbigene

position:1471850:-1
position: 1471850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485448:-1
position: 1485448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471850-1485448:-1:exon

EDA2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EDA2R
product: ectodysplasin A2 receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039572182.1
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(1471850..1476289,1476680..1476728,1476956..1477434,1477577..1477723,1478192..1478356,1478518..1478603,1479374..1479552,1480209..1480299,1485256..1485448))
location: region:1471850-1485448:-1
so has part: feature:1485256-1485448:-1:exon
so has part: feature:1480209-1480299:-1:exon
so has part: feature:1479374-1479552:-1:exon
so has part: feature:1478518-1478603:-1:exon
so has part: feature:1478192-1478356:-1:exon
so has part: feature:1477577-1477723:-1:exon
so has part: feature:1476956-1477434:-1:exon
so has part: feature:1476680-1476728:-1:exon
so has part: feature:1471850-1476289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485256-1485448:-1:exon

position:1485256:-1
position: 1485256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480209-1480299:-1:exon

position:1480209:-1
position: 1480209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480299:-1
position: 1480299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479374-1479552:-1:exon

position:1479374:-1
position: 1479374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479552:-1
position: 1479552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1478518-1478603:-1:exon

position:1478518:-1
position: 1478518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478603:-1
position: 1478603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1478192-1478356:-1:exon

position:1478192:-1
position: 1478192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478356:-1
position: 1478356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1477577-1477723:-1:exon

position:1477577:-1
position: 1477577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477723:-1
position: 1477723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1476956-1477434:-1:exon

position:1476956:-1
position: 1476956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477434:-1
position: 1477434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1476680-1476728:-1:exon

position:1476680:-1
position: 1476680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476728:-1
position: 1476728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1471850-1476289:-1:exon

position:1476289:-1
position: 1476289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDA2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EDA2R
product: ectodysplasin A2 receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039572181.1
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(1471850..1476289,1476680..1476728,1476956..1477434,1477577..1477723,1478192..1478356,1478518..1478603,1479374..1479552,1480209..1480317,1485256..1485448))
location: region:1471850-1485448:-1
so has part: feature:1485256-1485448:-1:exon
so has part: feature:1480209-1480317:-1:exon
so has part: feature:1479374-1479552:-1:exon
so has part: feature:1478518-1478603:-1:exon
so has part: feature:1478192-1478356:-1:exon
so has part: feature:1477577-1477723:-1:exon
so has part: feature:1476956-1477434:-1:exon
so has part: feature:1476680-1476728:-1:exon
so has part: feature:1471850-1476289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485256-1485448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1480209-1480317:-1:exon

position:1480317:-1
position: 1480317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479374-1479552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1478518-1478603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1478192-1478356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477577-1477723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476956-1477434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1476680-1476728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1471850-1476289:-1:exon

EDA2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EDA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 27
translation: MACQESEYLDDQKKCVPCRKCMPGQELSKDCGDGSGGDAQCVACPPRKFKDRWGHHGCKPCLSCALINRLQKSNCTATADAVCGECLPGFYRKARISGQLEWECIPCTKQTPSSEPQCRSRTNLVKVAVPTVPPQDTALLALTSSALVIIVLVLLALSIIYCKRFWKSQCQRVFLRTQNFSGQRATFPTAAVPGRFLCEEQMSGPCCLGVKNLSPCYRQAEGPVEAVQFISDGEAVGLQLPSLQPEMDLPPAIAISTASKAQLGRSLLESQPLIRASGHSDCLDGVLPPPTPRQDRPGPVEALAPLSSCASEMQHKWPHAPVECTELDLQKFSTQAEFMGSERLEDAASQAMKRIPAESGGVVQEGAHHLPTAEIPQGEQPVDDVQSLVTQISSTAKGLPIAELPHSLVQSLAFLLDPSLNGVKNFSHVALELGLMPQLLGRISGFEQLVAHFTYAGATVTVPLLAQALQRLQRFDALLLLCDHFALSPTPDHQR
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(1475994..1476289,1476680..1476728,1476956..1477434,1477577..1477723,1478192..1478356,1478518..1478603,1479374..1479552,1480209..1480295))
location: region:1475994-1480295:-1
so has part: feature:1480209-1480295:-1:exon
so has part: feature:1479374-1479552:-1:exon
so has part: feature:1478518-1478603:-1:exon
so has part: feature:1478192-1478356:-1:exon
so has part: feature:1477577-1477723:-1:exon
so has part: feature:1476956-1477434:-1:exon
so has part: feature:1476680-1476728:-1:exon
so has part: feature:1475994-1476289:-1:exon

XP_039428115.1
type: Protein
SIO_000068: ncbiprotein

position:1475994:-1
position: 1475994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480295:-1
position: 1480295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480209-1480295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479374-1479552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478518-1478603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1478192-1478356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477577-1477723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476956-1477434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476680-1476728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475994-1476289:-1:exon

EDA2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EDA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 27
translation: MACQESEYLDDQKKCVPCRKCMPGQELSKDCGDGSGGDAQCVACPPRKFKDRWGHHGCKPCLSCALINRLQKSNCTATADAVCGECLPGFYRKARISGQLEWECIPCTKQTPSSEPQCRSRTNLVKVAVPTVPPQDTALLALTSSALVIIVLVLLALSIIYCKRFWKSQCQRVFLRTQNFSGQRATFPTAAVPGRFLCEEQMSGPCCLGVKNLSPCYRQAEGPVEAVQFISDGEAVGLQLPSLQPEMDLPPAIAISTASKAQLGRSLLESQPLIRASGHSDCLDGVLPPPTPRQDRPGPVEALAPLSSCASEMQHKWPHAPVECTELDLQKFSTQAEFMGSERLEDAASQAMKRIPAESGGVVQEGAHHLPTAEIPQGEQPVDDVQSLVTQISSTAKGLPIAELPHSLVQSLAFLLDPSLNGVKNFSHVALELGLMPQLLGRISGFEQLVAHFTYAGATVTVPLLAQALQRLQRFDALLLLCDHFALSPTPDHQR
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(1475994..1476289,1476680..1476728,1476956..1477434,1477577..1477723,1478192..1478356,1478518..1478603,1479374..1479552,1480209..1480295))
location: region:1475994-1480295:-1
so has part: feature:1480209-1480295:-1:exon
so has part: feature:1479374-1479552:-1:exon
so has part: feature:1478518-1478603:-1:exon
so has part: feature:1478192-1478356:-1:exon
so has part: feature:1477577-1477723:-1:exon
so has part: feature:1476956-1477434:-1:exon
so has part: feature:1476680-1476728:-1:exon
so has part: feature:1475994-1476289:-1:exon

XP_039428116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480209-1480295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479374-1479552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478518-1478603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1478192-1478356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477577-1477723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476956-1477434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476680-1476728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475994-1476289:-1:exon

LOC109145044
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1497022..1508795)
location: region:1497022-1508795:-1
so has part: feature:1497022-1508795:-1:exon
subclass of: SO_0000011

109145044
type: Gene
SIO_000068: ncbigene

position:1497022:-1
position: 1497022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508795:-1
position: 1508795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497022-1508795:-1:exon

LOC109145044
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145044
product: uncharacterized LOC109145044
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002046176.3
SIO_010081: LOC109145044
subclass of: SO_0000673
so part of: LOC109145044
location: complement(join(1497022..1497356,1499081..1499648,1508437..1508795))
location: region:1497022-1508795:-1
so has part: feature:1508437-1508795:-1:exon
so has part: feature:1499081-1499648:-1:exon
so has part: feature:1497022-1497356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1508437-1508795:-1:exon

position:1508437:-1
position: 1508437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1499081-1499648:-1:exon

position:1499081:-1
position: 1499081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499648:-1
position: 1499648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1497022-1497356:-1:exon

position:1497356:-1
position: 1497356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AR
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1533963..1571837
location: region:1533963-1571837:1
so has part: feature:1533963-1571837:1:exon
subclass of: SO_0000010

104691338
type: Gene
SIO_000068: ncbigene

position:1533963:1
position: 1533963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571837:1
position: 1571837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533963-1571837:1:exon

AR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AR
product: androgen receptor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 ESTs, 42 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039572093.1
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(1533963..1535092,1552064..1552215,1560599..1560715,1566273..1566560,1568675..1568819,1569590..1569720,1569922..1570079,1570348..1571837)
location: region:1533963-1571837:1
so has part: feature:1533963-1535092:1:exon
so has part: feature:1552064-1552215:1:exon
so has part: feature:1560599-1560715:1:exon
so has part: feature:1566273-1566560:1:exon
so has part: feature:1568675-1568819:1:exon
so has part: feature:1569590-1569720:1:exon
so has part: feature:1569922-1570079:1:exon
so has part: feature:1570348-1571837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1533963-1535092:1:exon

position:1535092:1
position: 1535092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1552064-1552215:1:exon

position:1552064:1
position: 1552064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552215:1
position: 1552215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1560599-1560715:1:exon

position:1560599:1
position: 1560599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560715:1
position: 1560715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1566273-1566560:1:exon

position:1566273:1
position: 1566273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566560:1
position: 1566560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1568675-1568819:1:exon

position:1568675:1
position: 1568675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568819:1
position: 1568819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1569590-1569720:1:exon

position:1569590:1
position: 1569590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569720:1
position: 1569720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1569922-1570079:1:exon

position:1569922:1
position: 1569922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570079:1
position: 1570079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1570348-1571837:1:exon

position:1570348:1
position: 1570348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AR
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: androgen receptor
translation: MEVQLGVGRVYPRPPGRTFRGAFQSFFQSVCDAFQPREEPGAGQPPPSAPCPPTPPRPPPDSPACLPSPPGCLPPPEPRAPGKALPAAGPAMGSSFPCAGELRELLGEAGAMPPLLPPPETEPADKEDPLGDSARQLCRAVSASMGLALEALEMPAEPLPREDCMFAVPAGPPRAPRPPVRDPSPAFEAALAAEPPAGPGLPRGFGRVKLESAAGPAAGGGWGGPCRFGAELVPPGPAPPWPTFFAEEGQLYGPCPEPPAGPADCPADAWYPPGRPPFAASAAGIKSELEPWVEGYAGAYGDLRLETGREHVLPIDYYFPPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGARKLKKLGNLKAQEDMEGASSSSPTEEQAPKLVMTRIDGYECQPIFLNVLEAIEPGVVCAGHDNSQPDSFSNLLTSLNELGERQLVYVVKWAKALPGFRNLHVDDQMSIIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCIRMRHLSQEFGWLQITPQEFLCMKALLFFSIIPVDGLKNQKLFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKVLDSVHPIAKDLHQFTFDLLIKAHMVSVDYPEMMAEIISVQVPKILSGKVKPIYFHAQ
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(1534181..1535092,1552064..1552215,1560599..1560715,1566273..1566560,1568675..1568819,1569590..1569720,1569922..1570079,1570348..1570503)
location: region:1534181-1570503:1
so has part: feature:1534181-1535092:1:exon
so has part: feature:1552064-1552215:1:exon
so has part: feature:1560599-1560715:1:exon
so has part: feature:1566273-1566560:1:exon
so has part: feature:1568675-1568819:1:exon
so has part: feature:1569590-1569720:1:exon
so has part: feature:1569922-1570079:1:exon
so has part: feature:1570348-1570503:1:exon

XP_039428027.1
type: Protein
SIO_000068: ncbiprotein

position:1534181:1
position: 1534181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570503:1
position: 1570503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1534181-1535092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552064-1552215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1560599-1560715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1566273-1566560:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1568675-1568819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1569590-1569720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1569922-1570079:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570348-1570503:1:exon

OPHN1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: OPHN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1573795..1631654)
location: region:1573795-1631654:-1
so has part: feature:1573795-1631654:-1:exon
subclass of: SO_0000010

104691277
type: Gene
SIO_000068: ncbigene

position:1573795:-1
position: 1573795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1631654:-1
position: 1631654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573795-1631654:-1:exon

OPHN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: OPHN1
product: oligophrenin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_039571941.1
SIO_010081: OPHN1
subclass of: SO_0000673
so part of: OPHN1
location: complement(join(1573795..1582718,1582872..1582922,1583637..1583687,1584599..1584764,1585460..1585760,1586729..1586876,1590752..1590911,1591628..1591733,1593136..1593194,1593522..1593606,1595216..1595290,1596171..1596233,1597489..1597522,1598206..1598284,1598398..1598489,1600057..1600157,1601559..1601688,1602643..1602747,1603452..1603562,1604507..1604608,1611111..1611182,1612653..1612714,1616724..1616819,1631501..1631654))
location: region:1573795-1631654:-1
so has part: feature:1631501-1631654:-1:exon
so has part: feature:1616724-1616819:-1:exon
so has part: feature:1612653-1612714:-1:exon
so has part: feature:1611111-1611182:-1:exon
so has part: feature:1604507-1604608:-1:exon
so has part: feature:1603452-1603562:-1:exon
so has part: feature:1602643-1602747:-1:exon
so has part: feature:1601559-1601688:-1:exon
so has part: feature:1600057-1600157:-1:exon
so has part: feature:1598398-1598489:-1:exon
so has part: feature:1598206-1598284:-1:exon
so has part: feature:1597489-1597522:-1:exon
so has part: feature:1596171-1596233:-1:exon
so has part: feature:1595216-1595290:-1:exon
so has part: feature:1593522-1593606:-1:exon
so has part: feature:1593136-1593194:-1:exon
so has part: feature:1591628-1591733:-1:exon
so has part: feature:1590752-1590911:-1:exon
so has part: feature:1586729-1586876:-1:exon
so has part: feature:1585460-1585760:-1:exon
so has part: feature:1584599-1584764:-1:exon
so has part: feature:1583637-1583687:-1:exon
so has part: feature:1582872-1582922:-1:exon
so has part: feature:1573795-1582718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1631501-1631654:-1:exon

position:1631501:-1
position: 1631501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1616724-1616819:-1:exon

position:1616724:-1
position: 1616724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616819:-1
position: 1616819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1612653-1612714:-1:exon

position:1612653:-1
position: 1612653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612714:-1
position: 1612714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1611111-1611182:-1:exon

position:1611111:-1
position: 1611111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611182:-1
position: 1611182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1604507-1604608:-1:exon

position:1604507:-1
position: 1604507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604608:-1
position: 1604608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1603452-1603562:-1:exon

position:1603452:-1
position: 1603452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603562:-1
position: 1603562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1602643-1602747:-1:exon

position:1602643:-1
position: 1602643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602747:-1
position: 1602747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1601559-1601688:-1:exon

position:1601559:-1
position: 1601559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601688:-1
position: 1601688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1600057-1600157:-1:exon

position:1600057:-1
position: 1600057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600157:-1
position: 1600157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1598398-1598489:-1:exon

position:1598398:-1
position: 1598398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598489:-1
position: 1598489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1598206-1598284:-1:exon

position:1598206:-1
position: 1598206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598284:-1
position: 1598284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1597489-1597522:-1:exon

position:1597489:-1
position: 1597489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597522:-1
position: 1597522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1596171-1596233:-1:exon

position:1596171:-1
position: 1596171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596233:-1
position: 1596233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1595216-1595290:-1:exon

position:1595216:-1
position: 1595216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595290:-1
position: 1595290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1593522-1593606:-1:exon

position:1593522:-1
position: 1593522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593606:-1
position: 1593606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1593136-1593194:-1:exon

position:1593136:-1
position: 1593136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593194:-1
position: 1593194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1591628-1591733:-1:exon

position:1591628:-1
position: 1591628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591733:-1
position: 1591733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1590752-1590911:-1:exon

position:1590752:-1
position: 1590752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590911:-1
position: 1590911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1586729-1586876:-1:exon

position:1586729:-1
position: 1586729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586876:-1
position: 1586876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1585460-1585760:-1:exon

position:1585460:-1
position: 1585460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585760:-1
position: 1585760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1584599-1584764:-1:exon

position:1584599:-1
position: 1584599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584764:-1
position: 1584764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1583637-1583687:-1:exon

position:1583637:-1
position: 1583637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583687:-1
position: 1583687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1582872-1582922:-1:exon

position:1582872:-1
position: 1582872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582922:-1
position: 1582922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1573795-1582718:-1:exon

position:1582718:-1
position: 1582718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPHN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: OPHN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: oligophrenin-1
translation: MGHPPLEFSDCYLDSPDFRERLKCYEQELERTNKFIKEVIKDGNALIAAIRGYSSAVQKFSQTLQSFQFDFIGDTLTDDEINIAESFKEFAELLHEVELERSMMVQNASDLLIKPLENFRKEQIGFTKERKKKFEKDGEKFYSMLDRHLHLSSKKKESQLQEADLQVDKERHNFFESSLEYVYQIQEVQESKKFSIVEPVLAFLHSLFTYNNLTVELTQDFLPYKQQLQLSLQNTRNHFSSTREELEDLKKRMKEAPLTCKLPGQPTIEGYLYTQEKWALGISWVKYYCQYEKEAKTLRMTPIDQKPGAKQGTLDLTLKSCVRRKTDSIDKRFCFDIETNERSGTITLQALSEANRRLWMEAMDGKEPIYHSPITKQEEMELNEVGFKFVRKCINAVETKGITTEGVYRTVGSNIQVQKLLNAFFDPKCPGDVDLQSGDWDIKTITSSLKFYLRNLSEPVMTYKLHKELVLAAKSENLDYRLGAIHALVYKLPDKNREMLELLIQHLVNVCEHSRENLMSPSNMGVIFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEHFGKIYSGPPEDTTAPPVPPPRVAARRHKPITISKRPLRERPVFFEASVEESGAERLGQTPTAAAGRGGPKPLHRSRPPRARPXGDEPGRPPAESRPQPRTEPELGKLVNRLQDGGXKPGGRAANGVVTSPALRTATLQARRPAPRPPGICGREGDCDGVPKPRSHGDKPVITRPPVRPPDPPCRTPIPPKLEQRPDLIAGTAEEMPSSVVASRTKFFETASRRTGSSSSPQGRIPSDES
SIO_010081: OPHN1
subclass of: SO_0000673
so part of: OPHN1
location: complement(join(1582880..1582922,1583637..1583687,1584599..1584764,1585460..1585760,1586729..1586876,1590752..1590911,1591628..1591733,1593136..1593194,1593522..1593606,1595216..1595290,1596171..1596233,1597489..1597522,1598206..1598284,1598398..1598489,1600057..1600157,1601559..1601688,1602643..1602747,1603452..1603562,1604507..1604608,1611111..1611182,1612653..1612714,1616724..1616819,1631501..1631654))
location: region:1582880-1631654:-1
so has part: feature:1631501-1631654:-1:exon
so has part: feature:1616724-1616819:-1:exon
so has part: feature:1612653-1612714:-1:exon
so has part: feature:1611111-1611182:-1:exon
so has part: feature:1604507-1604608:-1:exon
so has part: feature:1603452-1603562:-1:exon
so has part: feature:1602643-1602747:-1:exon
so has part: feature:1601559-1601688:-1:exon
so has part: feature:1600057-1600157:-1:exon
so has part: feature:1598398-1598489:-1:exon
so has part: feature:1598206-1598284:-1:exon
so has part: feature:1597489-1597522:-1:exon
so has part: feature:1596171-1596233:-1:exon
so has part: feature:1595216-1595290:-1:exon
so has part: feature:1593522-1593606:-1:exon
so has part: feature:1593136-1593194:-1:exon
so has part: feature:1591628-1591733:-1:exon
so has part: feature:1590752-1590911:-1:exon
so has part: feature:1586729-1586876:-1:exon
so has part: feature:1585460-1585760:-1:exon
so has part: feature:1584599-1584764:-1:exon
so has part: feature:1583637-1583687:-1:exon
so has part: feature:1582880-1582922:-1:exon

XP_039427875.1
type: Protein
SIO_000068: ncbiprotein

position:1582880:-1
position: 1582880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631501-1631654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616724-1616819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612653-1612714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1611111-1611182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604507-1604608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603452-1603562:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1602643-1602747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1601559-1601688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1600057-1600157:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1598398-1598489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598206-1598284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1597489-1597522:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1596171-1596233:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1595216-1595290:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1593522-1593606:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1593136-1593194:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1591628-1591733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1590752-1590911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1586729-1586876:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1585460-1585760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1584599-1584764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1583637-1583687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1582880-1582922:-1:exon

YIPF6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: YIPF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1632116..1637645
location: region:1632116-1637645:1
so has part: feature:1632116-1637645:1:exon
subclass of: SO_0000010

104691278
type: Gene
SIO_000068: ncbigene

position:1632116:1
position: 1632116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637645:1
position: 1637645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632116-1637645:1:exon

YIPF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: YIPF6
product: Yip1 domain family member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039572231.1
SIO_010081: YIPF6
subclass of: SO_0000673
so part of: YIPF6
location: join(1632116..1632196,1632997..1633125,1633657..1633735,1634092..1634134,1634783..1634908,1635011..1635168,1635867..1637645)
location: region:1632116-1637645:1
so has part: feature:1632116-1632196:1:exon
so has part: feature:1632997-1633125:1:exon
so has part: feature:1633657-1633735:1:exon
so has part: feature:1634092-1634134:1:exon
so has part: feature:1634783-1634908:1:exon
so has part: feature:1635011-1635168:1:exon
so has part: feature:1635867-1637645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1632116-1632196:1:exon

position:1632196:1
position: 1632196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632997-1633125:1:exon

position:1632997:1
position: 1632997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633125:1
position: 1633125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1633657-1633735:1:exon

position:1633657:1
position: 1633657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633735:1
position: 1633735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1634092-1634134:1:exon

position:1634092:1
position: 1634092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634134:1
position: 1634134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1634783-1634908:1:exon

position:1634783:1
position: 1634783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634908:1
position: 1634908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1635011-1635168:1:exon

position:1635011:1
position: 1635011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635168:1
position: 1635168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1635867-1637645:1:exon

position:1635867:1
position: 1635867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: YIPF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF6
translation: MTSSGLHVAGAAKMAAAEGSGAGGTLFPGLADVSISQDIPVEGEITVPVGSHSPDEDYSTLDEPVKDTIMRDLKAVGKKFVHVMYPRKSSALLRDWDLWGPLVLCVSLALMLQGGSADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCVLPLTVAMLVCRLVLLAGAGTISFIIRLIVVGAMFGWSTLASTAFLADSQPPNRKALVVYPIFLFYFVISWMILTFTPQ
SIO_010081: YIPF6
subclass of: SO_0000673
so part of: YIPF6
location: join(1632119..1632196,1632997..1633125,1633657..1633735,1634092..1634134,1634783..1634908,1635011..1635168,1635867..1635985)
location: region:1632119-1635985:1
so has part: feature:1632119-1632196:1:exon
so has part: feature:1632997-1633125:1:exon
so has part: feature:1633657-1633735:1:exon
so has part: feature:1634092-1634134:1:exon
so has part: feature:1634783-1634908:1:exon
so has part: feature:1635011-1635168:1:exon
so has part: feature:1635867-1635985:1:exon

XP_039428165.1
type: Protein
SIO_000068: ncbiprotein

position:1632119:1
position: 1632119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635985:1
position: 1635985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632119-1632196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632997-1633125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1633657-1633735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1634092-1634134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1634783-1634908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1635011-1635168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1635867-1635985:1:exon

STARD8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: STARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1649071..1691655
location: region:1649071-1691655:1
so has part: feature:1649071-1691655:1:exon
subclass of: SO_0000010

104691279
type: Gene
SIO_000068: ncbigene

position:1649071:1
position: 1649071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691655:1
position: 1691655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649071-1691655:1:exon

STARD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: STARD8
product: StAR related lipid transfer domain containing 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_039572129.1
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(1649071..1649347,1651607..1651640,1681875..1681946,1683284..1683365,1684446..1684509,1684796..1686135,1686777..1686950,1687408..1687567,1687833..1688031,1688163..1688373,1688544..1688658,1688926..1689141,1689362..1689579,1689740..1689916,1690025..1691655)
location: region:1649071-1691655:1
so has part: feature:1649071-1649347:1:exon
so has part: feature:1651607-1651640:1:exon
so has part: feature:1681875-1681946:1:exon
so has part: feature:1683284-1683365:1:exon
so has part: feature:1684446-1684509:1:exon
so has part: feature:1684796-1686135:1:exon
so has part: feature:1686777-1686950:1:exon
so has part: feature:1687408-1687567:1:exon
so has part: feature:1687833-1688031:1:exon
so has part: feature:1688163-1688373:1:exon
so has part: feature:1688544-1688658:1:exon
so has part: feature:1688926-1689141:1:exon
so has part: feature:1689362-1689579:1:exon
so has part: feature:1689740-1689916:1:exon
so has part: feature:1690025-1691655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649071-1649347:1:exon

position:1649347:1
position: 1649347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1651607-1651640:1:exon

position:1651607:1
position: 1651607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651640:1
position: 1651640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1681875-1681946:1:exon

position:1681875:1
position: 1681875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681946:1
position: 1681946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1683284-1683365:1:exon

position:1683284:1
position: 1683284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683365:1
position: 1683365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1684446-1684509:1:exon

position:1684446:1
position: 1684446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684509:1
position: 1684509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1684796-1686135:1:exon

position:1684796:1
position: 1684796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686135:1
position: 1686135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1686777-1686950:1:exon

position:1686777:1
position: 1686777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686950:1
position: 1686950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1687408-1687567:1:exon

position:1687408:1
position: 1687408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687567:1
position: 1687567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1687833-1688031:1:exon

position:1687833:1
position: 1687833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688031:1
position: 1688031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1688163-1688373:1:exon

position:1688163:1
position: 1688163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688373:1
position: 1688373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1688544-1688658:1:exon

position:1688544:1
position: 1688544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688658:1
position: 1688658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1688926-1689141:1:exon

position:1688926:1
position: 1688926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689141:1
position: 1689141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1689362-1689579:1:exon

position:1689362:1
position: 1689362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689579:1
position: 1689579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1689740-1689916:1:exon

position:1689740:1
position: 1689740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689916:1
position: 1689916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1690025-1691655:1:exon

position:1690025:1
position: 1690025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STARD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: STARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stAR-related lipid transfer protein 8 isoform X1
translation: MPLLDFFWACFKRAKKFTLLEDKKDAEIEAKKACDWLRAAGFPQYAQLYEESSFPLDISAVKKDHSFLDQDSLKSLCRRLMTLNTCASMKLDVHFQRKQNEDSEEEDQCAISNRWAFQRDSKRWSRVGSADVLSQGSEALSCTMHPVSSRESVLTDLSTNPEATSLHSTGSVGSVGGTGGTLGTAATPSEPPSPLCATVNASSCSRSEGSAKEQPSGQGGGSKEKLKKRRSRSFLKRIESLRRKDKQRPSPDRRVAPHSSATLPPGWGSLQSNGDLAATRTNSSKRGIPASFHSKKHFFSVSYRTNRLLGPAGTKGSSDPKRSGVYLEDYDTATAAECQRRARHGDCLVYIPCDHKPGTFPKSLSIESLCPLGGSSLAHWNAGSAAVGLGEGGSSSSVEGSSSPRGFACRRRGSCSSLGSRVSVYDNVPEFGSSEDFCKDGEVTFENLDDILQHMWGLQQKVELWCKAISSGLDGEEGGEEEEDEEESDSGGEPSNLHFEEQSMSDVGTSASDFDSTGNSLNEAEEIETRERRDSGVGASLTRPCRKLRWHSFQNSHRPSLNSASLEINRQSSAQLNLLQKCSLLRLTAIMEKYSVPHKQAWTWTVPKFMKRSKVPDYRDKMVFGVPPIVNVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQALRHMNETSPDNVNYSGQSAYDVADLLKQYFRDLPEPIFTSKLTDTFLQIYQFVSKEQRLQAVQAAIILMPDENREVLQTLLYFLSDIASAEENQMTAGNLAVCLAPSIFHLNVSKKESTSPRAIHKRGTMGKPDQKDLNENMAATQGLSHMITDCKKLFQVSHDILLQLSSSYMAADAYPHPLADLVCQGESKDLHSYFEQSVQNLLKESSEKFKGWLSTAGPLNTELSCKKVGDGHPLRLWKVSTDVEAPPATVLHRVLRERHLWDEDLLQSRVVEALDKDMEVYHYVTDSMAPHPRRDCMVLRRWRTDLPRGACLLSSLSVEHDKVPVEGGVKAIVLTSQYLIEPSAMGRSRVTHICRADLRGRSPEWYNRVFGHLCAMELVRIRDSFPALSPNGPETKI
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(1649303..1649347,1651607..1651640,1681875..1681946,1683284..1683365,1684446..1684509,1684796..1686135,1686777..1686950,1687408..1687567,1687833..1688031,1688163..1688373,1688544..1688658,1688926..1689141,1689362..1689579,1689740..1689916,1690025..1690142)
location: region:1649303-1690142:1
so has part: feature:1649303-1649347:1:exon
so has part: feature:1651607-1651640:1:exon
so has part: feature:1681875-1681946:1:exon
so has part: feature:1683284-1683365:1:exon
so has part: feature:1684446-1684509:1:exon
so has part: feature:1684796-1686135:1:exon
so has part: feature:1686777-1686950:1:exon
so has part: feature:1687408-1687567:1:exon
so has part: feature:1687833-1688031:1:exon
so has part: feature:1688163-1688373:1:exon
so has part: feature:1688544-1688658:1:exon
so has part: feature:1688926-1689141:1:exon
so has part: feature:1689362-1689579:1:exon
so has part: feature:1689740-1689916:1:exon
so has part: feature:1690025-1690142:1:exon

XP_039428063.1
type: Protein
SIO_000068: ncbiprotein

position:1649303:1
position: 1649303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690142:1
position: 1690142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649303-1649347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651607-1651640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1681875-1681946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683284-1683365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684446-1684509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684796-1686135:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1686777-1686950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1687408-1687567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1687833-1688031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1688163-1688373:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1688544-1688658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1688926-1689141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689362-1689579:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1689740-1689916:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1690025-1690142:1:exon

STARD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: STARD8
product: StAR related lipid transfer domain containing 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_039572130.1
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(1673107..1673466,1681875..1681946,1683284..1683365,1684446..1684509,1684796..1686135,1686777..1686950,1687408..1687567,1687833..1688031,1688163..1688373,1688544..1688658,1688926..1689141,1689362..1689579,1689740..1689916,1690025..1691655)
location: region:1673107-1691655:1
so has part: feature:1673107-1673466:1:exon
so has part: feature:1681875-1681946:1:exon
so has part: feature:1683284-1683365:1:exon
so has part: feature:1684446-1684509:1:exon
so has part: feature:1684796-1686135:1:exon
so has part: feature:1686777-1686950:1:exon
so has part: feature:1687408-1687567:1:exon
so has part: feature:1687833-1688031:1:exon
so has part: feature:1688163-1688373:1:exon
so has part: feature:1688544-1688658:1:exon
so has part: feature:1688926-1689141:1:exon
so has part: feature:1689362-1689579:1:exon
so has part: feature:1689740-1689916:1:exon
so has part: feature:1690025-1691655:1:exon

position:1673107:1
position: 1673107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673107-1673466:1:exon

position:1673466:1
position: 1673466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681875-1681946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683284-1683365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684446-1684509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684796-1686135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686777-1686950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687408-1687567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1687833-1688031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1688163-1688373:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1688544-1688658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1688926-1689141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689362-1689579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689740-1689916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1690025-1691655:1:exon

STARD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: STARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stAR-related lipid transfer protein 8 isoform X2
translation: MLILFSAFNPRFPMNKAGINSSCHEIEAKKACDWLRAAGFPQYAQLYEESSFPLDISAVKKDHSFLDQDSLKSLCRRLMTLNTCASMKLDVHFQRKQNEDSEEEDQCAISNRWAFQRDSKRWSRVGSADVLSQGSEALSCTMHPVSSRESVLTDLSTNPEATSLHSTGSVGSVGGTGGTLGTAATPSEPPSPLCATVNASSCSRSEGSAKEQPSGQGGGSKEKLKKRRSRSFLKRIESLRRKDKQRPSPDRRVAPHSSATLPPGWGSLQSNGDLAATRTNSSKRGIPASFHSKKHFFSVSYRTNRLLGPAGTKGSSDPKRSGVYLEDYDTATAAECQRRARHGDCLVYIPCDHKPGTFPKSLSIESLCPLGGSSLAHWNAGSAAVGLGEGGSSSSVEGSSSPRGFACRRRGSCSSLGSRVSVYDNVPEFGSSEDFCKDGEVTFENLDDILQHMWGLQQKVELWCKAISSGLDGEEGGEEEEDEEESDSGGEPSNLHFEEQSMSDVGTSASDFDSTGNSLNEAEEIETRERRDSGVGASLTRPCRKLRWHSFQNSHRPSLNSASLEINRQSSAQLNLLQKCSLLRLTAIMEKYSVPHKQAWTWTVPKFMKRSKVPDYRDKMVFGVPPIVNVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQALRHMNETSPDNVNYSGQSAYDVADLLKQYFRDLPEPIFTSKLTDTFLQIYQFVSKEQRLQAVQAAIILMPDENREVLQTLLYFLSDIASAEENQMTAGNLAVCLAPSIFHLNVSKKESTSPRAIHKRGTMGKPDQKDLNENMAATQGLSHMITDCKKLFQVSHDILLQLSSSYMAADAYPHPLADLVCQGESKDLHSYFEQSVQNLLKESSEKFKGWLSTAGPLNTELSCKKVGDGHPLRLWKVSTDVEAPPATVLHRVLRERHLWDEDLLQSRVVEALDKDMEVYHYVTDSMAPHPRRDCMVLRRWRTDLPRGACLLSSLSVEHDKVPVEGGVKAIVLTSQYLIEPSAMGRSRVTHICRADLRGRSPEWYNRVFGHLCAMELVRIRDSFPALSPNGPETKI
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(1673394..1673466,1681875..1681946,1683284..1683365,1684446..1684509,1684796..1686135,1686777..1686950,1687408..1687567,1687833..1688031,1688163..1688373,1688544..1688658,1688926..1689141,1689362..1689579,1689740..1689916,1690025..1690142)
location: region:1673394-1690142:1
so has part: feature:1673394-1673466:1:exon
so has part: feature:1681875-1681946:1:exon
so has part: feature:1683284-1683365:1:exon
so has part: feature:1684446-1684509:1:exon
so has part: feature:1684796-1686135:1:exon
so has part: feature:1686777-1686950:1:exon
so has part: feature:1687408-1687567:1:exon
so has part: feature:1687833-1688031:1:exon
so has part: feature:1688163-1688373:1:exon
so has part: feature:1688544-1688658:1:exon
so has part: feature:1688926-1689141:1:exon
so has part: feature:1689362-1689579:1:exon
so has part: feature:1689740-1689916:1:exon
so has part: feature:1690025-1690142:1:exon

XP_039428064.1
type: Protein
SIO_000068: ncbiprotein

position:1673394:1
position: 1673394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673394-1673466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1681875-1681946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683284-1683365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684446-1684509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684796-1686135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686777-1686950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687408-1687567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1687833-1688031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1688163-1688373:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1688544-1688658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1688926-1689141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689362-1689579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689740-1689916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1690025-1690142:1:exon

LOC109145021
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1729880..1736007
location: region:1729880-1736007:1
so has part: feature:1729880-1736007:1:exon
subclass of: SO_0000011

109145021
type: Gene
SIO_000068: ncbigene

position:1729880:1
position: 1729880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736007:1
position: 1736007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1729880-1736007:1:exon

LOC109145021
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145021
product: uncharacterized LOC109145021
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002046143.3
SIO_010081: LOC109145021
subclass of: SO_0000673
so part of: LOC109145021
location: join(1729880..1729959,1730798..1730885,1735645..1736007)
location: region:1729880-1736007:1
so has part: feature:1729880-1729959:1:exon
so has part: feature:1730798-1730885:1:exon
so has part: feature:1735645-1736007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1729880-1729959:1:exon

position:1729959:1
position: 1729959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1730798-1730885:1:exon

position:1730798:1
position: 1730798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730885:1
position: 1730885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1735645-1736007:1:exon

position:1735645:1
position: 1735645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EFNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2156007..2204786)
location: region:2156007-2204786:-1
so has part: feature:2156007-2204786:-1:exon
subclass of: SO_0000010

104691281
type: Gene
SIO_000068: ncbigene

position:2156007:-1
position: 2156007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204786:-1
position: 2204786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156007-2204786:-1:exon

EFNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EFNB1
product: ephrin B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039571948.1
SIO_010081: EFNB1
subclass of: SO_0000673
so part of: EFNB1
location: complement(join(2156007..2160469,2161409..2161537,2162481..2162573,2175966..2176243,2204570..2204786))
location: region:2156007-2204786:-1
so has part: feature:2204570-2204786:-1:exon
so has part: feature:2175966-2176243:-1:exon
so has part: feature:2162481-2162573:-1:exon
so has part: feature:2161409-2161537:-1:exon
so has part: feature:2156007-2160469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2204570-2204786:-1:exon

position:2204570:-1
position: 2204570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2175966-2176243:-1:exon

position:2175966:-1
position: 2175966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176243:-1
position: 2176243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2162481-2162573:-1:exon

position:2162481:-1
position: 2162481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2162573:-1
position: 2162573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2161409-2161537:-1:exon

position:2161409:-1
position: 2161409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161537:-1
position: 2161537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2156007-2160469:-1:exon

position:2160469:-1
position: 2160469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EFNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-B1
translation: MARPRGGRWLLGVLLALCRLAAPLAKSLEPVSWSSANPKFMTGKGLVIYPEIGDKLDIICPKAEPSKPYEYYKLYLVRKEQADACSTVMDPNVLVTCNRPEQEIRFTIKFQEFSPNYMGLEFKRQQDYFITSTSNGTLDGLENREGGVCQTRSMKIVMKVGQDPNAVIPEQLTTSRPSKESDDTVKVVTQSPRSKVPAVEEPGKPGSVNQDGQETQGPSDGFLSSKVAVFAAIGAGCVIFILIIIFLVVLLIKIRKRHRKHTQQRAAALSLSTLASPKCSGNAGSEPSDIIIPLRTTENNYCPHYEKVSGDYGHPVYIVQEMPPQSPANIYYKV
SIO_010081: EFNB1
subclass of: SO_0000673
so part of: EFNB1
location: complement(join(2160081..2160469,2161409..2161537,2162481..2162573,2175966..2176243,2204570..2204685))
location: region:2160081-2204685:-1
so has part: feature:2204570-2204685:-1:exon
so has part: feature:2175966-2176243:-1:exon
so has part: feature:2162481-2162573:-1:exon
so has part: feature:2161409-2161537:-1:exon
so has part: feature:2160081-2160469:-1:exon

XP_039427882.1
type: Protein
SIO_000068: ncbiprotein

position:2160081:-1
position: 2160081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204685:-1
position: 2204685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204570-2204685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2175966-2176243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2162481-2162573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2161409-2161537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2160081-2160469:-1:exon

LOC109145028
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2209877..2212270)
location: region:2209877-2212270:-1
so has part: feature:2209877-2212270:-1:exon
subclass of: SO_0000011

109145028
type: Gene
SIO_000068: ncbigene

position:2209877:-1
position: 2209877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212270:-1
position: 2212270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2209877-2212270:-1:exon

LOC109145028
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145028
product: uncharacterized LOC109145028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_005604707.1
SIO_010081: LOC109145028
subclass of: SO_0000673
so part of: LOC109145028
location: complement(join(2209877..2210109,2210724..2210803,2212187..2212270))
location: region:2209877-2212270:-1
so has part: feature:2212187-2212270:-1:exon
so has part: feature:2210724-2210803:-1:exon
so has part: feature:2209877-2210109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2212187-2212270:-1:exon

position:2212187:-1
position: 2212187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2210724-2210803:-1:exon

position:2210724:-1
position: 2210724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210803:-1
position: 2210803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2209877-2210109:-1:exon

position:2210109:-1
position: 2210109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM155B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FAM155B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2249609..2269408
location: region:2249609-2269408:1
so has part: feature:2249609-2269408:1:exon
subclass of: SO_0000010

104691282
type: Gene
SIO_000068: ncbigene

position:2249609:1
position: 2249609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2269408:1
position: 2269408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2249609-2269408:1:exon

FAM155B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FAM155B
product: family with sequence similarity 155 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_039572178.1
SIO_010081: FAM155B
subclass of: SO_0000673
so part of: FAM155B
location: join(2249609..2250387,2267294..2267465,2267960..2269408)
location: region:2249609-2269408:1
so has part: feature:2249609-2250387:1:exon
so has part: feature:2267294-2267465:1:exon
so has part: feature:2267960-2269408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2249609-2250387:1:exon

position:2250387:1
position: 2250387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2267294-2267465:1:exon

position:2267294:1
position: 2267294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267465:1
position: 2267465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2267960-2269408:1:exon

position:2267960:1
position: 2267960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM155B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FAM155B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein FAM155B
translation: MIRGAWMSPRGGAAGGAVCCAPRRSDKPVADPERAQKWRLSLASLLFFTVLLSDHLWLCAGAKLRARERPRGRGPRALLAAEPAGGGGGGGSCEALLGNLSRGPGGPCPAARGDLDSACARLLAPQRPRAPGAPLRSPPVAAAAAAAAPFFASPSSKRTFLQAYFRNFNLSFCDTYTIWDLLREMAGPDGLDCSLDNLMVDLVVAAAGALGGEACSSCVQAYQRLDQHAQEKYEEFDLLLEKYLQSEEYSVRSCLTDCKAVYKAWLCSEYFNVTQQQCRQRIPCKQYCLEVQTRCPFVLPDNDELIYGGLPGFICTGLLENQLPDEEAKCCEVQWDSCEHPPDSNEDTSPKSTASESLHFHRHDPHLHHQRQNHYHLYHHHHHQYHQPRSPSLLPVSAGSRLGSSRIRLCVLVLMLLHTMVSFSSVHGGAGGLGLEAPPALEESVARDE
SIO_010081: FAM155B
subclass of: SO_0000673
so part of: FAM155B
location: join(2249611..2250387,2267294..2267465,2267960..2268360)
location: region:2249611-2268360:1
so has part: feature:2249611-2250387:1:exon
so has part: feature:2267294-2267465:1:exon
so has part: feature:2267960-2268360:1:exon

XP_039428112.1
type: Protein
SIO_000068: ncbiprotein

position:2249611:1
position: 2249611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268360:1
position: 2268360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2249611-2250387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2267294-2267465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2267960-2268360:1:exon

LOC109145022
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2272615..2274348)
location: region:2272615-2274348:-1
so has part: feature:2272615-2274348:-1:exon
subclass of: SO_0000010

109145022
type: Gene
SIO_000068: ncbigene

position:2272615:-1
position: 2272615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274348:-1
position: 2274348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2272615-2274348:-1:exon

LOC109145022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC109145022
product: SAP30-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039572222.1
SIO_010081: LOC109145022
subclass of: SO_0000673
so part of: LOC109145022
location: complement(join(2272615..2272668,2273605..2274348))
location: region:2272615-2274348:-1
so has part: feature:2273605-2274348:-1:exon
so has part: feature:2272615-2272668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2273605-2274348:-1:exon

position:2273605:-1
position: 2273605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2272615-2272668:-1:exon

position:2272668:-1
position: 2272668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109145022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC109145022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAP30-binding protein-like
translation: MAKHSILSLLSVYAEESDLESDSEAGMAGSDGEVPTGEKGGLVSAGYGADDFTCLDGDEEGYKEEDDENSRQSEHDDSETEKPEPGDLKKFPEVEERDRQELVVYFSEGVQNMSLDEIKIGPEPPGRCSNQLQDKIQKLYEMKMKEGMDMNYMIQRKKEFCNPSLYEKLIQFCSIDEIGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLVKAKREHAKIEFVTGTKKGTTRRAASTTTTTSTTTAAAEHLPAPPVALSGSE
SIO_010081: LOC109145022
subclass of: SO_0000673
so part of: LOC109145022
location: complement(join(2272615..2272668,2273605..2274345))
location: region:2272615-2274345:-1
so has part: feature:2273605-2274345:-1:exon
so has part: feature:2272615-2272668:-1:exon

XP_039428156.1
type: Protein
SIO_000068: ncbiprotein

position:2274345:-1
position: 2274345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2273605-2274345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272615-2272668:-1:exon

EDA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2287057..2349573
location: region:2287057-2349573:1
so has part: feature:2287057-2349573:1:exon
subclass of: SO_0000010

104691340
type: Gene
SIO_000068: ncbigene

position:2287057:1
position: 2287057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2349573:1
position: 2349573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287057-2349573:1:exon

EDA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EDA
product: ectodysplasin A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039572223.1
SIO_010081: EDA
subclass of: SO_0000673
so part of: EDA
location: join(2287057..2287088,2287330..2287831,2323923..2324028,2340270..2340299,2343348..2343527,2344328..2344362,2344465..2344516,2346818..2346948,2348324..2349573)
location: region:2287057-2349573:1
so has part: feature:2287057-2287088:1:exon
so has part: feature:2287330-2287831:1:exon
so has part: feature:2323923-2324028:1:exon
so has part: feature:2340270-2340299:1:exon
so has part: feature:2343348-2343527:1:exon
so has part: feature:2344328-2344362:1:exon
so has part: feature:2344465-2344516:1:exon
so has part: feature:2346818-2346948:1:exon
so has part: feature:2348324-2349573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2287057-2287088:1:exon

position:2287088:1
position: 2287088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2287330-2287831:1:exon

position:2287330:1
position: 2287330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287831:1
position: 2287831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2323923-2324028:1:exon

position:2323923:1
position: 2323923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2324028:1
position: 2324028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2340270-2340299:1:exon

position:2340270:1
position: 2340270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340299:1
position: 2340299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2343348-2343527:1:exon

position:2343348:1
position: 2343348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2343527:1
position: 2343527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2344328-2344362:1:exon

position:2344328:1
position: 2344328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344362:1
position: 2344362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2344465-2344516:1:exon

position:2344465:1
position: 2344465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344516:1
position: 2344516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2346818-2346948:1:exon

position:2346818:1
position: 2346818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2346948:1
position: 2346948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2348324-2349573:1:exon

position:2348324:1
position: 2348324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectodysplasin-A
translation: MRTGIGIGTGIPRPCPLRAPPPGRALRRRCRGRAPPLSRPAPPRSRPGPAPWRGAGGPAAQPAVPGAPREQQRWGRSAPLRPSAPWARSAGRRAPAPRGCACGGGGGSWRLFLGFFALSLALHVLTLGCYLELRSELRRDRGPQPAAPPRRDGTAAAPGAPAGGRPQRAAEGAERRQQLALLNFFHPEEKLHVGEEGRRVRRNKRSKGSEGPDGPSSVKNKKKGKKAGPPGPNGPQGPPGPPGPQGPPGIPGIPGIPGTTVMGPPGPPGPPGPQGPPGVQGPSGATDKASSRDIQPAVVHLQGQGSAIQVKNDLSGGVLNDWSRITLNPKVFKLHARSGELEVLVDGTYFIYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTNFNTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGDAPAS
SIO_010081: EDA
subclass of: SO_0000673
so part of: EDA
location: join(2287057..2287088,2287330..2287831,2323923..2324028,2340270..2340299,2343348..2343527,2344328..2344362,2344465..2344516,2346818..2346948,2348324..2348575)
location: region:2287057-2348575:1
so has part: feature:2287057-2287088:1:exon
so has part: feature:2287330-2287831:1:exon
so has part: feature:2323923-2324028:1:exon
so has part: feature:2340270-2340299:1:exon
so has part: feature:2343348-2343527:1:exon
so has part: feature:2344328-2344362:1:exon
so has part: feature:2344465-2344516:1:exon
so has part: feature:2346818-2346948:1:exon
so has part: feature:2348324-2348575:1:exon

XP_039428157.1
type: Protein
SIO_000068: ncbiprotein

position:2348575:1
position: 2348575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287057-2287088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2287330-2287831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2323923-2324028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2340270-2340299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2343348-2343527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2344328-2344362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2344465-2344516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2346818-2346948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2348324-2348575:1:exon

LOC104691284
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2352322..2358681
location: region:2352322-2358681:1
so has part: feature:2352322-2358681:1:exon
subclass of: SO_0000010

104691284
type: Gene
SIO_000068: ncbigene

position:2352322:1
position: 2352322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358681:1
position: 2358681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352322-2358681:1:exon

LOC104691284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691284
product: transforming growth factor beta activator LRRC32-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019287710.3
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: join(2352322..2352699,2354027..2358681)
location: region:2352322-2358681:1
so has part: feature:2352322-2352699:1:exon
so has part: feature:2354027-2358681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2352322-2352699:1:exon

position:2352699:1
position: 2352699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354027-2358681:1:exon

position:2354027:1
position: 2354027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta activator LRRC32-like isoform X2
translation: MSSMAETSHPWTTPQQPESLHHMELATLSQKNPNCAFWRVPREAWGRVPKECVSTRRHKDQEMPPQKKSLWVGHSSGCTDPTWSCRRDSSLLVPALGEESPMKVSCKGVGLRKFPKELGQGIKYLELSNNFIQNLSGSTMPGFGQLEYLDVCFNQLEAVSATALARLPRLHSLLLGSNHLDRNYLANGEAFHLLRNIEVLDLSVNNLESHMASWYISNLTSLRVLDLSGNMMTKLLAGTFRSSPRLRQLDLSNNYIMEIQEGAFEPLEELEVLNLALNSLHCISGFSLTQLRVLNLSHNALELFSSEEGAQPYLLRMLDLSHNRLLSFPELPKAHDLTHLNLSNNLIASLLPGSPHPREFVLLYKEMQRFNRTVHPTAALPHVADLDLSNNRLELFPFSFFHSLGTLHSLSLARNCLRDVVREFVSNGTELSVRSLDLHSNALRVLPRWFFDSLPHLESMDLGSNSLQPCESQVSDQGRDLGVDSHTSAPGDTCTPFYNVPHLKHLSLSKNNISRLQPYAFNQTLLHSLDLSGNRDLSIPTGALGGLELSLQELSLRDNLMDESQAALPCLGTLRVLDLSGNRLNLLPSGLSCSPLESLHIRDNNLQTLGKLGSWSHSLRAVSVAGNPWSCCSLGWLDALRAASVAVLDLPQACCAFQEHGRNISARITGTPHWICPQPKGTASLALLVALMGLSLLGAWAFCLLRKGQKAPECAGLGSNRVGVSQPHPKGEGPAEERPPDSVTEV
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: join(2352403..2352699,2354027..2355970)
location: region:2352403-2355970:1
so has part: feature:2352403-2352699:1:exon
so has part: feature:2354027-2355970:1:exon

XP_019143255.3
type: Protein
SIO_000068: ncbiprotein

position:2352403:1
position: 2352403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355970:1
position: 2355970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352403-2352699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354027-2355970:1:exon

LOC104691284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691284
product: transforming growth factor beta activator LRRC32-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039572309.1
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: join(2352847..2353480,2353612..2358681)
location: region:2352847-2358681:1
so has part: feature:2352847-2353480:1:exon
so has part: feature:2353612-2358681:1:exon

position:2352847:1
position: 2352847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352847-2353480:1:exon

position:2353480:1
position: 2353480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2353612-2358681:1:exon

position:2353612:1
position: 2353612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691284
product: transforming growth factor beta activator LRRC32-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039572308.1
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: join(2352847..2353480,2354027..2358681)
location: region:2352847-2358681:1
so has part: feature:2352847-2353480:1:exon
so has part: feature:2354027-2358681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2352847-2353480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354027-2358681:1:exon

LOC104691284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta activator LRRC32-like isoform X1
translation: MAAEPSPAAPAVPGAGTACPWHRETPPNPLSFPTCHLCLLAFDVTAGPAGHLSCLLPIPPFLFPFPAALCRFFPLCELMSFFSHFRSYEHPHALSPSPIPSWSLFIQSLAPAQPASDAAGAGRGWRRPQPNMLWAPRGCFLLWLLSAILRAGASPEARPSPALCQQSPMKVSCKGVGLRKFPKELGQGIKYLELSNNFIQNLSGSTMPGFGQLEYLDVCFNQLEAVSATALARLPRLHSLLLGSNHLDRNYLANGEAFHLLRNIEVLDLSVNNLESHMASWYISNLTSLRVLDLSGNMMTKLLAGTFRSSPRLRQLDLSNNYIMEIQEGAFEPLEELEVLNLALNSLHCISGFSLTQLRVLNLSHNALELFSSEEGAQPYLLRMLDLSHNRLLSFPELPKAHDLTHLNLSNNLIASLLPGSPHPREFVLLYKEMQRFNRTVHPTAALPHVADLDLSNNRLELFPFSFFHSLGTLHSLSLARNCLRDVVREFVSNGTELSVRSLDLHSNALRVLPRWFFDSLPHLESMDLGSNSLQPCESQVSDQGRDLGVDSHTSAPGDTCTPFYNVPHLKHLSLSKNNISRLQPYAFNQTLLHSLDLSGNRDLSIPTGALGGLELSLQELSLRDNLMDESQAALPCLGTLRVLDLSGNRLNLLPSGLSCSPLESLHIRDNNLQTLGKLGSWSHSLRAVSVAGNPWSCCSLGWLDALRAASVAVLDLPQACCAFQEHGRNISARITGTPHWICPQPKGTASLALLVALMGLSLLGAWAFCLLRKGQKAPECAGLGSNRVGVSQPHPKGEGPAEERPPDSVTEV
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: join(2352983..2353480,2354027..2355970)
location: region:2352983-2355970:1
so has part: feature:2352983-2353480:1:exon
so has part: feature:2354027-2355970:1:exon

XP_039428242.1
type: Protein
SIO_000068: ncbiprotein

position:2352983:1
position: 2352983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352983-2353480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354027-2355970:1:exon

LOC104691284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta activator LRRC32-like isoform X3
translation: MKVSCKGVGLRKFPKELGQGIKYLELSNNFIQNLSGSTMPGFGQLEYLDVCFNQLEAVSATALARLPRLHSLLLGSNHLDRNYLANGEAFHLLRNIEVLDLSVNNLESHMASWYISNLTSLRVLDLSGNMMTKLLAGTFRSSPRLRQLDLSNNYIMEIQEGAFEPLEELEVLNLALNSLHCISGFSLTQLRVLNLSHNALELFSSEEGAQPYLLRMLDLSHNRLLSFPELPKAHDLTHLNLSNNLIASLLPGSPHPREFVLLYKEMQRFNRTVHPTAALPHVADLDLSNNRLELFPFSFFHSLGTLHSLSLARNCLRDVVREFVSNGTELSVRSLDLHSNALRVLPRWFFDSLPHLESMDLGSNSLQPCESQVSDQGRDLGVDSHTSAPGDTCTPFYNVPHLKHLSLSKNNISRLQPYAFNQTLLHSLDLSGNRDLSIPTGALGGLELSLQELSLRDNLMDESQAALPCLGTLRVLDLSGNRLNLLPSGLSCSPLESLHIRDNNLQTLGKLGSWSHSLRAVSVAGNPWSCCSLGWLDALRAASVAVLDLPQACCAFQEHGRNISARITGTPHWICPQPKGTASLALLVALMGLSLLGAWAFCLLRKGQKAPECAGLGSNRVGVSQPHPKGEGPAEERPPDSVTEV
SIO_010081: LOC104691284
subclass of: SO_0000673
so part of: LOC104691284
location: 2354033..2355970
location: region:2354033-2355970:1
so has part: feature:2354033-2355970:1:exon

XP_039428243.1
type: Protein
SIO_000068: ncbiprotein

position:2354033:1
position: 2354033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354033-2355970:1:exon

LOC104691341
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2359299..2366331
location: region:2359299-2366331:1
so has part: feature:2359299-2366331:1:exon
subclass of: SO_0000010

104691341
type: Gene
SIO_000068: ncbigene

position:2359299:1
position: 2359299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366331:1
position: 2366331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2359299-2366331:1:exon

LOC104691341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691341
product: protein Wnt-11b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_039572310.1
SIO_010081: LOC104691341
subclass of: SO_0000673
so part of: LOC104691341
location: join(2359299..2362525,2362613..2362833,2363241..2363518,2364226..2364518,2365260..2366331)
location: region:2359299-2366331:1
so has part: feature:2359299-2362525:1:exon
so has part: feature:2362613-2362833:1:exon
so has part: feature:2363241-2363518:1:exon
so has part: feature:2364226-2364518:1:exon
so has part: feature:2365260-2366331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2359299-2362525:1:exon

position:2362525:1
position: 2362525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2362613-2362833:1:exon

position:2362613:1
position: 2362613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2362833:1
position: 2362833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2363241-2363518:1:exon

position:2363241:1
position: 2363241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2363518:1
position: 2363518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2364226-2364518:1:exon

position:2364226:1
position: 2364226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364518:1
position: 2364518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2365260-2366331:1:exon

position:2365260:1
position: 2365260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-11b-like
translation: MGRPAAAATALLCQLGLSAAIQWLGLAGSGVAWNESQHCRLLVPEQLQLCRRHLEVMPSIVRAARRTQALCQQSFADMRWNCSSIQRAPSFGRDLLTGTREAAFVHALAAAAVAQGIARSCASGELPLCSCGPGPSEPPAPGSRWGGCGDNLSHGLQLGAAFTEGSARAGTGGTPGLRAVNRHNGAVGRAVLRDSLDTRCKCHGVSGSCSVKTCWKGLPDLDEIASDLKSRYLAALKVTHRLVGPRKQLIPKEGDARPVTEMDLVYLINSPDYCTPNPQLGSLGTQDRPCNRSSVGSDSCDLLCCGRGYNTYTEEVTERCHCRYRWCCSVVCRRCRRSLQRHVCK
SIO_010081: LOC104691341
subclass of: SO_0000673
so part of: LOC104691341
location: join(2362455..2362525,2362613..2362833,2363241..2363518,2364226..2364518,2365260..2365434)
location: region:2362455-2365434:1
so has part: feature:2362455-2362525:1:exon
so has part: feature:2362613-2362833:1:exon
so has part: feature:2363241-2363518:1:exon
so has part: feature:2364226-2364518:1:exon
so has part: feature:2365260-2365434:1:exon

XP_039428244.1
type: Protein
SIO_000068: ncbiprotein

position:2362455:1
position: 2362455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365434:1
position: 2365434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2362455-2362525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2362613-2362833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2363241-2363518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2364226-2364518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2365260-2365434:1:exon

IGBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: IGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2370330..2375237
location: region:2370330-2375237:1
so has part: feature:2370330-2375237:1:exon
subclass of: SO_0000010

104691342
type: Gene
SIO_000068: ncbigene

position:2370330:1
position: 2370330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375237:1
position: 2375237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370330-2375237:1:exon

IGBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IGBP1
product: immunoglobulin binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039572213.1
SIO_010081: IGBP1
subclass of: SO_0000673
so part of: IGBP1
location: join(2370330..2370532,2371055..2371353,2372508..2372703,2373588..2373673,2374272..2374375,2374713..2375237)
location: region:2370330-2375237:1
so has part: feature:2370330-2370532:1:exon
so has part: feature:2371055-2371353:1:exon
so has part: feature:2372508-2372703:1:exon
so has part: feature:2373588-2373673:1:exon
so has part: feature:2374272-2374375:1:exon
so has part: feature:2374713-2375237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2370330-2370532:1:exon

position:2370532:1
position: 2370532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2371055-2371353:1:exon

position:2371055:1
position: 2371055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2371353:1
position: 2371353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2372508-2372703:1:exon

position:2372508:1
position: 2372508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372703:1
position: 2372703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2373588-2373673:1:exon

position:2373588:1
position: 2373588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2373673:1
position: 2373673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2374272-2374375:1:exon

position:2374272:1
position: 2374272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374375:1
position: 2374375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2374713-2375237:1:exon

position:2374713:1
position: 2374713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IGBP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: immunoglobulin-binding protein 1
translation: MMAEAGAGGPRLAELLGLGQRLWDELEASTEPSSGAPAVQEKVRQGLDALQRAAAMVAQLELFSENEELEEIASADLKFMLLPALLGALTLKQVDLSRRREHLETAREHFLRFLRLCRNYGLGSFQLAPGTSSEEGAGSPSXPRDPAQPNLVAMAMSRTAKIERYKQKKELENKLASMSSSVESGTADEDQIREFYILQIQKWIGTSLEETESIEQELVILRSRDAARQAPAGFRGPSRPARPPLKPFILTRDAAQARVFGAGYPAVPSMTVNDWYEQRQRQGVVSTPQRVPAGASDEELQKQQQETQEEEDDEEALRKARDWDDWKDTHPRGYGNRHNMG
SIO_010081: IGBP1
subclass of: SO_0000673
so part of: IGBP1
location: join(2370342..2370532,2371055..2371353,2372508..2372703,2373588..2373673,2374272..2374375,2374713..2374861)
location: region:2370342-2374861:1
so has part: feature:2370342-2370532:1:exon
so has part: feature:2371055-2371353:1:exon
so has part: feature:2372508-2372703:1:exon
so has part: feature:2373588-2373673:1:exon
so has part: feature:2374272-2374375:1:exon
so has part: feature:2374713-2374861:1:exon

XP_039428147.1
type: Protein
SIO_000068: ncbiprotein

position:2370342:1
position: 2370342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374861:1
position: 2374861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370342-2370532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2371055-2371353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2372508-2372703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2373588-2373673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2374272-2374375:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2374713-2374861:1:exon

LOC104691343
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2376488..2380789
location: region:2376488-2380789:1
so has part: feature:2376488-2380789:1:exon
subclass of: SO_0000010

104691343
type: Gene
SIO_000068: ncbigene

position:2376488:1
position: 2376488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380789:1
position: 2380789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376488-2380789:1:exon

LOC104691343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691343
product: diacylglycerol O-acyltransferase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039572212.1
SIO_010081: LOC104691343
subclass of: SO_0000673
so part of: LOC104691343
location: join(2376488..2376593,2378049..2378177,2378253..2378360,2378612..2378682,2378760..2378964,2379510..2379684,2379776..2379978,2380119..2380789)
location: region:2376488-2380789:1
so has part: feature:2376488-2376593:1:exon
so has part: feature:2378049-2378177:1:exon
so has part: feature:2378253-2378360:1:exon
so has part: feature:2378612-2378682:1:exon
so has part: feature:2378760-2378964:1:exon
so has part: feature:2379510-2379684:1:exon
so has part: feature:2379776-2379978:1:exon
so has part: feature:2380119-2380789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2376488-2376593:1:exon

position:2376593:1
position: 2376593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2378049-2378177:1:exon

position:2378049:1
position: 2378049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378177:1
position: 2378177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2378253-2378360:1:exon

position:2378253:1
position: 2378253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378360:1
position: 2378360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2378612-2378682:1:exon

position:2378612:1
position: 2378612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378682:1
position: 2378682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2378760-2378964:1:exon

position:2378760:1
position: 2378760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378964:1
position: 2378964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2379510-2379684:1:exon

position:2379510:1
position: 2379510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379684:1
position: 2379684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2379776-2379978:1:exon

position:2379776:1
position: 2379776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379978:1
position: 2379978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2380119-2380789:1:exon

position:2380119:1
position: 2380119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691343
product: diacylglycerol O-acyltransferase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039572211.1
SIO_010081: LOC104691343
subclass of: SO_0000673
so part of: LOC104691343
location: join(2376490..2376593,2377983..2378177,2378253..2378360,2378612..2378682,2378760..2378964,2379510..2379684,2379776..2379978,2380119..2380789)
location: region:2376490-2380789:1
so has part: feature:2376490-2376593:1:exon
so has part: feature:2377983-2378177:1:exon
so has part: feature:2378253-2378360:1:exon
so has part: feature:2378612-2378682:1:exon
so has part: feature:2378760-2378964:1:exon
so has part: feature:2379510-2379684:1:exon
so has part: feature:2379776-2379978:1:exon
so has part: feature:2380119-2380789:1:exon

position:2376490:1
position: 2376490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376490-2376593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377983-2378177:1:exon

position:2377983:1
position: 2377983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2378253-2378360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378612-2378682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2378760-2378964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2379510-2379684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2379776-2379978:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2380119-2380789:1:exon

LOC104691343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diacylglycerol O-acyltransferase 2-like isoform X1
translation: MKTIIAACSQNLSARWPRPCASRAVLGGGRVPLSAGSRASIQTALRTLLAVPWPSQRDVRSALQLLAVLQWVLSFLLLGTVSLLLLIYLLFTSLWLVPVLYLAWIIFDWDTPEKGGRRLPCLRRWTVWKHFRDYFPVKLVKTHDLSPSHNYIIGSHPHGILCVGAFCNFITGSTGFEELFPGIRSFLTTLAGNFRLPVFREYLMSGGLCPVTRRAIGYLLSQKGTGNAVAIVIGGAAESLSCRPGVTTLILKNRKGFVRMALRHGAFLVPSFSFGENDLFRQVVFEEGSWMRSIQRRFQKIMGFAPCLFYGRGLTSGRSHGFLPFSRPITTVVGEPVAVPKVENPSRELVDRYHELYIHALLKLFKENKTKYGLSESDELHIL
SIO_010081: LOC104691343
subclass of: SO_0000673
so part of: LOC104691343
location: join(2376554..2376593,2377983..2378177,2378253..2378360,2378612..2378682,2378760..2378964,2379510..2379684,2379776..2379978,2380119..2380273)
location: region:2376554-2380273:1
so has part: feature:2376554-2376593:1:exon
so has part: feature:2377983-2378177:1:exon
so has part: feature:2378253-2378360:1:exon
so has part: feature:2378612-2378682:1:exon
so has part: feature:2378760-2378964:1:exon
so has part: feature:2379510-2379684:1:exon
so has part: feature:2379776-2379978:1:exon
so has part: feature:2380119-2380273:1:exon

XP_039428145.1
type: Protein
SIO_000068: ncbiprotein

position:2376554:1
position: 2376554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380273:1
position: 2380273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376554-2376593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377983-2378177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2378253-2378360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378612-2378682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2378760-2378964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2379510-2379684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2379776-2379978:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2380119-2380273:1:exon

LOC104691343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diacylglycerol O-acyltransferase 2-like isoform X2
translation: MKTIIAACSQNLSGSRASIQTALRTLLAVPWPSQRDVRSALQLLAVLQWVLSFLLLGTVSLLLLIYLLFTSLWLVPVLYLAWIIFDWDTPEKGGRRLPCLRRWTVWKHFRDYFPVKLVKTHDLSPSHNYIIGSHPHGILCVGAFCNFITGSTGFEELFPGIRSFLTTLAGNFRLPVFREYLMSGGLCPVTRRAIGYLLSQKGTGNAVAIVIGGAAESLSCRPGVTTLILKNRKGFVRMALRHGAFLVPSFSFGENDLFRQVVFEEGSWMRSIQRRFQKIMGFAPCLFYGRGLTSGRSHGFLPFSRPITTVVGEPVAVPKVENPSRELVDRYHELYIHALLKLFKENKTKYGLSESDELHIL
SIO_010081: LOC104691343
subclass of: SO_0000673
so part of: LOC104691343
location: join(2376554..2376593,2378049..2378177,2378253..2378360,2378612..2378682,2378760..2378964,2379510..2379684,2379776..2379978,2380119..2380273)
location: region:2376554-2380273:1
so has part: feature:2376554-2376593:1:exon
so has part: feature:2378049-2378177:1:exon
so has part: feature:2378253-2378360:1:exon
so has part: feature:2378612-2378682:1:exon
so has part: feature:2378760-2378964:1:exon
so has part: feature:2379510-2379684:1:exon
so has part: feature:2379776-2379978:1:exon
so has part: feature:2380119-2380273:1:exon

XP_039428146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2376554-2376593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2378049-2378177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2378253-2378360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378612-2378682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2378760-2378964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2379510-2379684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2379776-2379978:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2380119-2380273:1:exon

P2RY4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: P2RY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2381569..2386921)
location: region:2381569-2386921:-1
so has part: feature:2381569-2386921:-1:exon
subclass of: SO_0000010

104691285
type: Gene
SIO_000068: ncbigene

position:2381569:-1
position: 2381569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386921:-1
position: 2386921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381569-2386921:-1:exon

P2RY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: P2RY4
product: pyrimidinergic receptor P2Y4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_039572210.1
SIO_010081: P2RY4
subclass of: SO_0000673
so part of: P2RY4
location: complement(join(2381569..2383230,2386781..2386921))
location: region:2381569-2386921:-1
so has part: feature:2386781-2386921:-1:exon
so has part: feature:2381569-2383230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2386781-2386921:-1:exon

position:2386781:-1
position: 2386781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2381569-2383230:-1:exon

position:2383230:-1
position: 2383230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: P2RY4
product: pyrimidinergic receptor P2Y4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039572209.1
SIO_010081: P2RY4
subclass of: SO_0000673
so part of: P2RY4
location: complement(join(2381569..2383230,2383469..2384342,2386781..2386921))
location: region:2381569-2386921:-1
so has part: feature:2386781-2386921:-1:exon
so has part: feature:2383469-2384342:-1:exon
so has part: feature:2381569-2383230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2386781-2386921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2383469-2384342:-1:exon

position:2383469:-1
position: 2383469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384342:-1
position: 2384342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2381569-2383230:-1:exon

P2RY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: P2RY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 4 isoform X1
translation: MLQHSLHQIWFWLHPHLHQQHSSSCSPVTHASIHPRLEELFHQEWWRVWSRHRQPSPVLCWTPWWWQNLPFPSRVLNFDSLSSCRLPRSSQIPAFDPNACRRECPAGLVNLLCHELGHGSSSSSPQGSVHPFPTDSTRRLLAVQGHSLPKAPLTAPAGLLWVTAFPRTSLSSPPAFLLPRSPSGAAALSGWCQLGCGSFQEAALAPAGGCWCSSRSHCSAAVGLCPAGPAWCSVPGAELRPRPAPGSAWRSRPCAGSKRSGWQNMAAPVRTFPVALWTPTPAPWLGGNTTAEPEAKCVFNEEFKFILLPVSYSFVFVVGLPLNSWALWMFISRMRPWNATTTYMVNLALSDTLYVLSLPTLVYYYADRNNWPFGTGLCKIVRFLFYANLYSSILFLTCISVHRYVGICHPIRSLKWVKTKQARIICVAAWLVVTICLIPNLIFVTTSSKGNITLCHDTTKPEEFDHYVHYSSSVMALLFGVPFLIIVLCYCLMAKRLCKSNFSSPSLRMPSYKRRSIKMIIVVLVVFAICFVPFHITRTLYYTSRYFQADCRTLNIINFTYKVTRPLASINSCLDPILYFMAGDKYRGWLRRGAAQRLRPVPTLDVALVSPFTDNVMDGSHISSGTRGTGTARSGGGC
SIO_010081: P2RY4
subclass of: SO_0000673
so part of: P2RY4
location: complement(join(2382090..2383230,2383469..2384244))
location: region:2382090-2384244:-1
so has part: feature:2383469-2384244:-1:exon
so has part: feature:2382090-2383230:-1:exon

XP_039428143.1
type: Protein
SIO_000068: ncbiprotein

position:2382090:-1
position: 2382090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384244:-1
position: 2384244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383469-2384244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382090-2383230:-1:exon

P2RY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: P2RY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 4 isoform X2
translation: MAAPVRTFPVALWTPTPAPWLGGNTTAEPEAKCVFNEEFKFILLPVSYSFVFVVGLPLNSWALWMFISRMRPWNATTTYMVNLALSDTLYVLSLPTLVYYYADRNNWPFGTGLCKIVRFLFYANLYSSILFLTCISVHRYVGICHPIRSLKWVKTKQARIICVAAWLVVTICLIPNLIFVTTSSKGNITLCHDTTKPEEFDHYVHYSSSVMALLFGVPFLIIVLCYCLMAKRLCKSNFSSPSLRMPSYKRRSIKMIIVVLVVFAICFVPFHITRTLYYTSRYFQADCRTLNIINFTYKVTRPLASINSCLDPILYFMAGDKYRGWLRRGAAQRLRPVPTLDVALVSPFTDNVMDGSHISSGTRGTGTARSGGGC
SIO_010081: P2RY4
subclass of: SO_0000673
so part of: P2RY4
location: complement(2382090..2383214)
location: region:2382090-2383214:-1
so has part: feature:2382090-2383214:-1:exon

XP_039428144.1
type: Protein
SIO_000068: ncbiprotein

position:2383214:-1
position: 2383214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382090-2383214:-1:exon

LOC104691345
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2387784..2396790)
location: region:2387784-2396790:-1
so has part: feature:2387784-2396790:-1:exon
subclass of: SO_0000010

104691345
type: Gene
SIO_000068: ncbigene

position:2387784:-1
position: 2387784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396790:-1
position: 2396790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2387784-2396790:-1:exon

LOC104691345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691345
product: phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039571870.1
SIO_010081: LOC104691345
subclass of: SO_0000673
so part of: LOC104691345
location: complement(join(2387784..2388516,2388593..2388674,2388790..2388946,2389134..2389221,2389390..2389478,2389562..2389678,2389761..2389850,2389951..2390032,2390258..2390346,2390601..2390700,2390780..2390918,2391088..2391184,2391293..2391410,2391665..2391861,2392258..2392360,2392555..2392661,2392847..2392961,2393050..2393157,2393294..2393380,2393502..2393589,2393736..2393876,2393953..2394070,2394149..2394281,2394848..2394911,2395877..2396297,2396450..2396790))
location: region:2387784-2396790:-1
so has part: feature:2396450-2396790:-1:exon
so has part: feature:2395877-2396297:-1:exon
so has part: feature:2394848-2394911:-1:exon
so has part: feature:2394149-2394281:-1:exon
so has part: feature:2393953-2394070:-1:exon
so has part: feature:2393736-2393876:-1:exon
so has part: feature:2393502-2393589:-1:exon
so has part: feature:2393294-2393380:-1:exon
so has part: feature:2393050-2393157:-1:exon
so has part: feature:2392847-2392961:-1:exon
so has part: feature:2392555-2392661:-1:exon
so has part: feature:2392258-2392360:-1:exon
so has part: feature:2391665-2391861:-1:exon
so has part: feature:2391293-2391410:-1:exon
so has part: feature:2391088-2391184:-1:exon
so has part: feature:2390780-2390918:-1:exon
so has part: feature:2390601-2390700:-1:exon
so has part: feature:2390258-2390346:-1:exon
so has part: feature:2389951-2390032:-1:exon
so has part: feature:2389761-2389850:-1:exon
so has part: feature:2389562-2389678:-1:exon
so has part: feature:2389390-2389478:-1:exon
so has part: feature:2389134-2389221:-1:exon
so has part: feature:2388790-2388946:-1:exon
so has part: feature:2388593-2388674:-1:exon
so has part: feature:2387784-2388516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2396450-2396790:-1:exon

position:2396450:-1
position: 2396450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2395877-2396297:-1:exon

position:2395877:-1
position: 2395877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396297:-1
position: 2396297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2394848-2394911:-1:exon

position:2394848:-1
position: 2394848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394911:-1
position: 2394911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394149-2394281:-1:exon

position:2394149:-1
position: 2394149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394281:-1
position: 2394281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2393953-2394070:-1:exon

position:2393953:-1
position: 2393953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394070:-1
position: 2394070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2393736-2393876:-1:exon

position:2393736:-1
position: 2393736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393876:-1
position: 2393876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2393502-2393589:-1:exon

position:2393502:-1
position: 2393502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393589:-1
position: 2393589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2393294-2393380:-1:exon

position:2393294:-1
position: 2393294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393380:-1
position: 2393380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2393050-2393157:-1:exon

position:2393050:-1
position: 2393050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393157:-1
position: 2393157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2392847-2392961:-1:exon

position:2392847:-1
position: 2392847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392961:-1
position: 2392961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2392555-2392661:-1:exon

position:2392555:-1
position: 2392555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392661:-1
position: 2392661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2392258-2392360:-1:exon

position:2392258:-1
position: 2392258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392360:-1
position: 2392360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2391665-2391861:-1:exon

position:2391665:-1
position: 2391665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391861:-1
position: 2391861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2391293-2391410:-1:exon

position:2391293:-1
position: 2391293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391410:-1
position: 2391410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2391088-2391184:-1:exon

position:2391088:-1
position: 2391088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391184:-1
position: 2391184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2390780-2390918:-1:exon

position:2390780:-1
position: 2390780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390918:-1
position: 2390918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2390601-2390700:-1:exon

position:2390601:-1
position: 2390601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390700:-1
position: 2390700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2390258-2390346:-1:exon

position:2390258:-1
position: 2390258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390346:-1
position: 2390346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2389951-2390032:-1:exon

position:2389951:-1
position: 2389951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390032:-1
position: 2390032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2389761-2389850:-1:exon

position:2389761:-1
position: 2389761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389850:-1
position: 2389850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2389562-2389678:-1:exon

position:2389562:-1
position: 2389562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389678:-1
position: 2389678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2389390-2389478:-1:exon

position:2389390:-1
position: 2389390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389478:-1
position: 2389478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2389134-2389221:-1:exon

position:2389134:-1
position: 2389134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389221:-1
position: 2389221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2388790-2388946:-1:exon

position:2388790:-1
position: 2388790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388946:-1
position: 2388946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2388593-2388674:-1:exon

position:2388593:-1
position: 2388593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388674:-1
position: 2388674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2387784-2388516:-1:exon

position:2388516:-1
position: 2388516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691345
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like
translation: MAAAGWYHRDISQVVAEGLLAKAGRDGSFLVRDSESVKGAYALCLLFQRHVYTYRILPDDEGLLSVQTIQGIQAKCFRTLPDLIGTYQHPNNGLVTPLLHPVHRARPDEDSDGEDARGWGHTVPCPGAPPSSRTHIPQQLHQRLQEQVHSSPASDFMGFMAEYLTHHVQLDLEALCHGHPQLRHLSTALATACRALHSEIDFTLAGLETLARVFDPPVSPRSPAREQGFLSSDPDLELLLNKISTVNQLLSSLEKKVLKSLQETVTRHNLALPSVAVAPPPAARPLAVQNFEVKVGKSQRAALTVDVELGTVTVTKRGSGSPEEVIPQDKILQLIKYQSVQSKVRLMCARDNQKSVSRDFIFPSARKREAFCQLLQLMKIQHSNLDEPELISVYVGTWNMGSTPPPRSLASWLTSRGLGRTQDETTACIPHDIYVIGTQENSLGDREWVEFLCASLKTLMAIDYRVVALQCLWSIKIVVLVKPEHLRRISHVHTSSVKTGIANTLGNKGAVGVSFLFNGTSFGFVNCHLASGSEKTHRRNQNYSDILHSLALGDKRLGGFDLTLRFTHLFWFGDLNYRLDMDVQDILTHIVKKDFQALLAVDQLNLEREKNKVFLRFSEGDISFPPTYRYERGTRDTYVWQKSKPTGVRINVPSWCDRILWKSHPETHVVCNSYGCTDDIVTSDHSPVFATFEVGVTSQFVPKEAPGSSPEALACIEWESIEVILKTTSRSKCYIEFHSYCLEEMQRSGENTFQNCDIPGFLKLGWSSKHLPVLNPILPDLEYLGDQHLLLSIKGVESCESYGECCLAVRSAIGTTAQQFETFLFHRGEETGSVRGWMRVRVPRGRCGTRERLYEWISFEEEDAEPAAEAPVCPKPRPQRLRSRPRSLPEPATGYTNPAYFIFEGVPNAXAPGPGAAPKKQAEGSAGGQQSRSPTGPRVPLPSEEEPCGGRPRCGPPSPSRGHPLSPPRVGHHKRPKSAVLTRDTAGLGDCSLYVATHLSQLDQVSPHCRGDRHEVPLRQTHPALEPPPRPCREAPKPLGKRGGLGALELEAQAPPPADLQPARMQ
SIO_010081: LOC104691345
subclass of: SO_0000673
so part of: LOC104691345
location: complement(join(2387962..2388516,2388593..2388674,2388790..2388946,2389134..2389221,2389390..2389478,2389562..2389678,2389761..2389850,2389951..2390032,2390258..2390346,2390601..2390700,2390780..2390918,2391088..2391184,2391293..2391410,2391665..2391861,2392258..2392360,2392555..2392661,2392847..2392961,2393050..2393157,2393294..2393380,2393502..2393589,2393736..2393876,2393953..2394070,2394149..2394281,2394848..2394911,2395877..2396013))
location: region:2387962-2396013:-1
so has part: feature:2395877-2396013:-1:exon
so has part: feature:2394848-2394911:-1:exon
so has part: feature:2394149-2394281:-1:exon
so has part: feature:2393953-2394070:-1:exon
so has part: feature:2393736-2393876:-1:exon
so has part: feature:2393502-2393589:-1:exon
so has part: feature:2393294-2393380:-1:exon
so has part: feature:2393050-2393157:-1:exon
so has part: feature:2392847-2392961:-1:exon
so has part: feature:2392555-2392661:-1:exon
so has part: feature:2392258-2392360:-1:exon
so has part: feature:2391665-2391861:-1:exon
so has part: feature:2391293-2391410:-1:exon
so has part: feature:2391088-2391184:-1:exon
so has part: feature:2390780-2390918:-1:exon
so has part: feature:2390601-2390700:-1:exon
so has part: feature:2390258-2390346:-1:exon
so has part: feature:2389951-2390032:-1:exon
so has part: feature:2389761-2389850:-1:exon
so has part: feature:2389562-2389678:-1:exon
so has part: feature:2389390-2389478:-1:exon
so has part: feature:2389134-2389221:-1:exon
so has part: feature:2388790-2388946:-1:exon
so has part: feature:2388593-2388674:-1:exon
so has part: feature:2387962-2388516:-1:exon

XP_039427804.1
type: Protein
SIO_000068: ncbiprotein

position:2387962:-1
position: 2387962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396013:-1
position: 2396013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2395877-2396013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2394848-2394911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394149-2394281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393953-2394070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393736-2393876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2393502-2393589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2393294-2393380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2393050-2393157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2392847-2392961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2392555-2392661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392258-2392360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2391665-2391861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2391293-2391410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2391088-2391184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2390780-2390918:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2390601-2390700:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2390258-2390346:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2389951-2390032:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2389761-2389850:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2389562-2389678:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2389390-2389478:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2389134-2389221:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2388790-2388946:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2388593-2388674:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387962-2388516:-1:exon

ARR3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ARR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2400010..2407803
location: region:2400010-2407803:1
so has part: feature:2400010-2407803:1:exon
subclass of: SO_0000010

104691286
type: Gene
SIO_000068: ncbigene

position:2400010:1
position: 2400010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407803:1
position: 2407803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2400010-2407803:1:exon

ARR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARR3
product: arrestin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019287708.3
SIO_010081: ARR3
subclass of: SO_0000673
so part of: ARR3
location: join(2400010..2400189,2401429..2401478,2401907..2401937,2402267..2402327,2402677..2402721,2403007..2403206,2403307..2403366,2403621..2403688,2403983..2404118,2404195..2404279,2404386..2404458,2404962..2405099,2405536..2405619,2405883..2405906,2405984..2406036,2406487..2406496,2407605..2407803)
location: region:2400010-2407803:1
so has part: feature:2400010-2400189:1:exon
so has part: feature:2401429-2401478:1:exon
so has part: feature:2401907-2401937:1:exon
so has part: feature:2402267-2402327:1:exon
so has part: feature:2402677-2402721:1:exon
so has part: feature:2403007-2403206:1:exon
so has part: feature:2403307-2403366:1:exon
so has part: feature:2403621-2403688:1:exon
so has part: feature:2403983-2404118:1:exon
so has part: feature:2404195-2404279:1:exon
so has part: feature:2404386-2404458:1:exon
so has part: feature:2404962-2405099:1:exon
so has part: feature:2405536-2405619:1:exon
so has part: feature:2405883-2405906:1:exon
so has part: feature:2405984-2406036:1:exon
so has part: feature:2406487-2406496:1:exon
so has part: feature:2407605-2407803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400010-2400189:1:exon

position:2400189:1
position: 2400189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2401429-2401478:1:exon

position:2401429:1
position: 2401429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401478:1
position: 2401478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2401907-2401937:1:exon

position:2401907:1
position: 2401907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401937:1
position: 2401937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2402267-2402327:1:exon

position:2402267:1
position: 2402267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402327:1
position: 2402327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2402677-2402721:1:exon

position:2402677:1
position: 2402677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402721:1
position: 2402721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2403007-2403206:1:exon

position:2403007:1
position: 2403007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403206:1
position: 2403206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2403307-2403366:1:exon

position:2403307:1
position: 2403307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403366:1
position: 2403366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2403621-2403688:1:exon

position:2403621:1
position: 2403621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403688:1
position: 2403688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2403983-2404118:1:exon

position:2403983:1
position: 2403983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404118:1
position: 2404118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2404195-2404279:1:exon

position:2404195:1
position: 2404195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404279:1
position: 2404279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2404386-2404458:1:exon

position:2404386:1
position: 2404386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404458:1
position: 2404458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2404962-2405099:1:exon

position:2404962:1
position: 2404962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405099:1
position: 2405099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2405536-2405619:1:exon

position:2405536:1
position: 2405536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition