Corvus cornix cornix isolate S_Up_H32 chromosome 23, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 23, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_046352.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_046352.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022205.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7530976
topology: linear
so has quality: SO_0000987
location: 1..7530976
location: region:1-7530976:1
RO_0002162: 932674

NC_046352
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7530976:1
position: 7530976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7530976:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 23
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

LOC120411214
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1377335..1393973
location: region:1377335-1393973:1
so has part: feature:1377335-1393973:1:exon
subclass of: SO_0000011

120411214
type: Gene
SIO_000068: ncbigene

position:1377335:1
position: 1377335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393973:1
position: 1393973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377335-1393973:1:exon

LOC120411214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411214
product: uncharacterized LOC120411214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XR_005603604.1
SIO_010081: LOC120411214
subclass of: SO_0000673
so part of: LOC120411214
location: join(1377335..1377416,1385420..1385423,1393961..1393973)
location: region:1377335-1393973:1
so has part: feature:1377335-1377416:1:exon
so has part: feature:1385420-1385423:1:exon
so has part: feature:1393961-1393973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377335-1377416:1:exon

position:1377416:1
position: 1377416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1385420-1385423:1:exon

position:1385420:1
position: 1385420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385423:1
position: 1385423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1393961-1393973:1:exon

position:1393961:1
position: 1393961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104694645
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104694645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1553269..1554792)
location: region:1553269-1554792:-1
so has part: feature:1553269-1554792:-1:exon
subclass of: SO_0000010

104694645
type: Gene
SIO_000068: ncbigene

position:1553269:-1
position: 1553269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554792:-1
position: 1554792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553269-1554792:-1:exon

LOC104694645
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104694645
product: serine/arginine-rich splicing factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564495.1
SIO_010081: LOC104694645
subclass of: SO_0000673
so part of: LOC104694645
location: complement(join(1553269..1553869,1554773..1554792))
location: region:1553269-1554792:-1
so has part: feature:1554773-1554792:-1:exon
so has part: feature:1553269-1553869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554773-1554792:-1:exon

position:1554773:-1
position: 1554773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1553269-1553869:-1:exon

position:1553869:-1
position: 1553869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104694645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104694645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 2
translation: MRKKIWWSPLHLSERSRGRRYYGFGRTIYPEAYRSRSWSRGRAYYRRSYSRSRSYRSHYPPRHYRHRYPRHRSRSRRYSRSYSRSRSRSRGYRRSRSWSRSRSRSRARRNGSRRSRSSSRSSCSSRSSSSSSASSSPKKRGSSVSSKRSCASSSQKTNAGKTDDMTDFMDDLSLGTETGHCRTAAKPEPAAESVLLLRKPRDAHKC
SIO_010081: LOC104694645
subclass of: SO_0000673
so part of: LOC104694645
location: complement(join(1553269..1553869,1554773..1554792))
location: region:1553269-1554792:-1
so has part: feature:1554773-1554792:-1:exon
so has part: feature:1553269-1553869:-1:exon

XP_039420429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1554773-1554792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553269-1553869:-1:exon

LOC120411193
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2890592..2895951)
location: region:2890592-2895951:-1
so has part: feature:2890592-2895951:-1:exon
subclass of: SO_0000010

120411193
type: Gene
SIO_000068: ncbigene

position:2890592:-1
position: 2890592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895951:-1
position: 2895951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890592-2895951:-1:exon

LOC120411193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411193
product: collagen alpha-1(III) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039564573.1
SIO_010081: LOC120411193
subclass of: SO_0000673
so part of: LOC120411193
location: complement(join(2890592..2890709,2892459..2892694,2893031..2893153,2893436..2894571,2894648..2895474,2895740..2895951))
location: region:2890592-2895951:-1
so has part: feature:2895740-2895951:-1:exon
so has part: feature:2894648-2895474:-1:exon
so has part: feature:2893436-2894571:-1:exon
so has part: feature:2893031-2893153:-1:exon
so has part: feature:2892459-2892694:-1:exon
so has part: feature:2890592-2890709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2895740-2895951:-1:exon

position:2895740:-1
position: 2895740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2894648-2895474:-1:exon

position:2894648:-1
position: 2894648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895474:-1
position: 2895474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2893436-2894571:-1:exon

position:2893436:-1
position: 2893436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894571:-1
position: 2894571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2893031-2893153:-1:exon

position:2893031:-1
position: 2893031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893153:-1
position: 2893153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2892459-2892694:-1:exon

position:2892459:-1
position: 2892459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892694:-1
position: 2892694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2890592-2890709:-1:exon

position:2890709:-1
position: 2890709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120411193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(III) chain-like
translation: MAVLGTRGCQRDINDPDRVVVPQLPLGVSRGERRSRLSPGAGPGRSRSPVTARKSPVNEPQPPVRIGNVGQGPARPPGSPAPGSAPGLASLRDWRGGTAFPAGAGNGASPSSAKPGSAETPVCRSRNRWGRCCPSLQPGGSRGPPGGSGGTGSEGKDTSNRDEEVAQLGSAGREQLHTALGRGGSGPLAPGAPGPAAPGRSPAPGDGGRRPRTVCVESPEMPRRLSAARYRRPRTGELCCRGAPGPPRAPTPPGLLLSLGRTAAAAPSRVRCCPRRDLNESGGSRRASSPASGPPASALPRAAPRPSGSAAAQPGKRHRTGPHSCLRGQAVDDGGMNLLDQSVIKKEFLLAGGSGWIGPRQRLSVPPGRQKHGAGDSRYWGSRQIPMPARPGTPGREESGPTPGGRRERREGARGGLVARRRAPTARWPPRPRPPRPRRHPGSREYPPCPACSTGCPTAATASGRTSRGCSLRPTAPLGLDPRTRRSALCTSTSSRPGPRSAGSRRCPYPQGQEPLTRTWRTRRSATRPPPTSSRPTSPLRTRRGPPAAAAIAQPGRPTARRRLTAAVFAAAGPRRGAARGAAGRDGTGGRGPGGLGPGVRARPAPMLVHSYPGMVSAGRARGIEGRRRGRPRGPARPGACHVHGVGAGAEERAGDGRRRSGVPRPDARSRGGGRAPAAITGARRARCREPSGPRGSGRRVPGHAPRGAAGTPRPSPPAPAAWCAGPRNPGRSPELSRRDRPRAPLPPSSSVPSPGCSSRSPSGRRCLWRGLLVCPDPRSAVGPWGHACVPVISGRCECVSGCESGRVCACARVDGPQPGHGARGPRGAVTVVSGCLAGILRVARADANIDLLVSALIALLHRMFVADPQEQRSLEKNWFIFD
SIO_010081: LOC120411193
subclass of: SO_0000673
so part of: LOC120411193
location: complement(join(2890592..2890709,2892459..2892694,2893031..2893153,2893436..2894571,2894648..2895474,2895740..2895951))
location: region:2890592-2895951:-1
so has part: feature:2895740-2895951:-1:exon
so has part: feature:2894648-2895474:-1:exon
so has part: feature:2893436-2894571:-1:exon
so has part: feature:2893031-2893153:-1:exon
so has part: feature:2892459-2892694:-1:exon
so has part: feature:2890592-2890709:-1:exon

XP_039420507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2895740-2895951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2894648-2895474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2893436-2894571:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2893031-2893153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2892459-2892694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2890592-2890709:-1:exon

PHB
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3753590..3758407
location: region:3753590-3758407:1
so has part: feature:3753590-3758407:1:exon
subclass of: SO_0000010

104683625
type: Gene
SIO_000068: ncbigene

position:3753590:1
position: 3753590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3758407:1
position: 3758407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3753590-3758407:1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHB
product: prohibitin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039564598.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(3753590..3753667,3754172..3754297,3754647..3754808,3755451..3755593,3755893..3756009,3756679..3756774,3757392..3758407)
location: region:3753590-3758407:1
so has part: feature:3753590-3753667:1:exon
so has part: feature:3754172-3754297:1:exon
so has part: feature:3754647-3754808:1:exon
so has part: feature:3755451-3755593:1:exon
so has part: feature:3755893-3756009:1:exon
so has part: feature:3756679-3756774:1:exon
so has part: feature:3757392-3758407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3753590-3753667:1:exon

position:3753667:1
position: 3753667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3754172-3754297:1:exon

position:3754172:1
position: 3754172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754297:1
position: 3754297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3754647-3754808:1:exon

position:3754647:1
position: 3754647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754808:1
position: 3754808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3755451-3755593:1:exon

position:3755451:1
position: 3755451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755593:1
position: 3755593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3755893-3756009:1:exon

position:3755893:1
position: 3755893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756009:1
position: 3756009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3756679-3756774:1:exon

position:3756679:1
position: 3756679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756774:1
position: 3756774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3757392-3758407:1:exon

position:3757392:1
position: 3757392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESIGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDVVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(3754210..3754297,3754647..3754808,3755451..3755593,3755893..3756009,3756679..3756774,3757392..3757604)
location: region:3754210-3757604:1
so has part: feature:3754210-3754297:1:exon
so has part: feature:3754647-3754808:1:exon
so has part: feature:3755451-3755593:1:exon
so has part: feature:3755893-3756009:1:exon
so has part: feature:3756679-3756774:1:exon
so has part: feature:3757392-3757604:1:exon

XP_039420532.1
type: Protein
SIO_000068: ncbiprotein

position:3754210:1
position: 3754210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757604:1
position: 3757604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754210-3754297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3754647-3754808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3755451-3755593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755893-3756009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3756679-3756774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3757392-3757604:1:exon

LOC104683615
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104683615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3761194..3765003)
location: region:3761194-3765003:-1
so has part: feature:3761194-3765003:-1:exon
subclass of: SO_0000011

104683615
type: Gene
SIO_000068: ncbigene

position:3761194:-1
position: 3761194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765003:-1
position: 3765003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3761194-3765003:-1:exon

LOC104683615
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104683615
product: uncharacterized LOC104683615, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005603584.1
SIO_010081: LOC104683615
subclass of: SO_0000673
so part of: LOC104683615
location: complement(join(3761194..3764284,3764945..3765003))
location: region:3761194-3765003:-1
so has part: feature:3764945-3765003:-1:exon
so has part: feature:3761194-3764284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3764945-3765003:-1:exon

position:3764945:-1
position: 3764945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3761194-3764284:-1:exon

position:3764284:-1
position: 3764284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104683615
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104683615
product: uncharacterized LOC104683615, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_005603583.1
SIO_010081: LOC104683615
subclass of: SO_0000673
so part of: LOC104683615
location: complement(join(3761194..3764284,3764541..3764707))
location: region:3761194-3764707:-1
so has part: feature:3764541-3764707:-1:exon
so has part: feature:3761194-3764284:-1:exon

position:3764707:-1
position: 3764707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3764541-3764707:-1:exon

position:3764541:-1
position: 3764541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3761194-3764284:-1:exon

LOC104683615
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104683615
product: uncharacterized LOC104683615, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_005603582.1
SIO_010081: LOC104683615
subclass of: SO_0000673
so part of: LOC104683615
location: complement(join(3761194..3764287,3764541..3764707))
location: region:3761194-3764707:-1
so has part: feature:3764541-3764707:-1:exon
so has part: feature:3761194-3764287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3764541-3764707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3761194-3764287:-1:exon

position:3764287:-1
position: 3764287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3765165..3788435
location: region:3765165-3788435:1
so has part: feature:3765165-3788435:1:exon
subclass of: SO_0000010

104683616
type: Gene
SIO_000068: ncbigene

position:3765165:1
position: 3765165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788435:1
position: 3788435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3765165-3788435:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF652
product: zinc finger protein 652
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_039564579.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(3765165..3765421,3777603..3778715,3782003..3782150,3782919..3783034,3784439..3784583,3785177..3788435)
location: region:3765165-3788435:1
so has part: feature:3765165-3765421:1:exon
so has part: feature:3777603-3778715:1:exon
so has part: feature:3782003-3782150:1:exon
so has part: feature:3782919-3783034:1:exon
so has part: feature:3784439-3784583:1:exon
so has part: feature:3785177-3788435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3765165-3765421:1:exon

position:3765421:1
position: 3765421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3777603-3778715:1:exon

position:3777603:1
position: 3777603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3778715:1
position: 3778715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3782003-3782150:1:exon

position:3782003:1
position: 3782003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3782150:1
position: 3782150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3782919-3783034:1:exon

position:3782919:1
position: 3782919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3783034:1
position: 3783034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3784439-3784583:1:exon

position:3784439:1
position: 3784439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784583:1
position: 3784583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3785177-3788435:1:exon

position:3785177:1
position: 3785177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF652
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 652
translation: MSQAAKACQQLGEPPGAGMAQEDARRAQGPPAFYPSQELDLSTKVYKRESGSPFSVLVDSKMSKGHLHEREEQPFFRESRAVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKDTAVLKTSSEEEEGDSGEEATEDSNDYEENERQKKKEKRVEKVSVAQRRTRRAASAAAAATSPAPRATRGRRKSVEPPRRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPGTSPGPRRRRPRAPARPLPGPAGRGXTPLGLSPAVPPRPLPHPYGPLALRRPGTTPHGHHPQHLPVPPVPHLPPPPALFKSEPLNHRGHGHGDGGFLRHLDKASPAQPH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(3777822..3778715,3782003..3782150,3782919..3783034,3784439..3784583,3785177..3785687)
location: region:3777822-3785687:1
so has part: feature:3777822-3778715:1:exon
so has part: feature:3782003-3782150:1:exon
so has part: feature:3782919-3783034:1:exon
so has part: feature:3784439-3784583:1:exon
so has part: feature:3785177-3785687:1:exon

XP_039420513.1
type: Protein
SIO_000068: ncbiprotein

position:3777822:1
position: 3777822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785687:1
position: 3785687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3777822-3778715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3782003-3782150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3782919-3783034:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3784439-3784583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3785177-3785687:1:exon

PHOSPHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3792169..3798419
location: region:3792169-3798419:1
so has part: feature:3792169-3798419:1:exon
subclass of: SO_0000010

120411207
type: Gene
SIO_000068: ncbigene

position:3792169:1
position: 3792169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3798419:1
position: 3798419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3792169-3798419:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_039564637.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(3792169..3792272,3795566..3795647,3796516..3798419)
location: region:3792169-3798419:1
so has part: feature:3792169-3792272:1:exon
so has part: feature:3795566-3795647:1:exon
so has part: feature:3796516-3798419:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3792169-3792272:1:exon

position:3792272:1
position: 3792272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3795566-3795647:1:exon

position:3795566:1
position: 3795566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3795647:1
position: 3795647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3796516-3798419:1:exon

position:3796516:1
position: 3796516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039564638.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(3792185..3792272,3795495..3795647,3796516..3798419)
location: region:3792185-3798419:1
so has part: feature:3792185-3792272:1:exon
so has part: feature:3795495-3795647:1:exon
so has part: feature:3796516-3798419:1:exon

position:3792185:1
position: 3792185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3792185-3792272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3795495-3795647:1:exon

position:3795495:1
position: 3795495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3796516-3798419:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MRRCCEGVGLPCLFKGVGMAGARPPRFLLVFDFDETIVDENSDDSVVRGRALPEQLRQSPREGSYNEHMQRVLAFLGEQGLRAADFRAVYENIPLSPGMAELFQFLSKHHELFEVILISDANMFGIEAKLRAAGVRSLFRKIFSNPASFDRRGFLTLGPYHSHKCLQCPANMCKRKILTEYLAERAQEEVEFQRVFYVGDGANDFCPSGTLTAADVAFPRKGYPMHRMIQEIQEKQPGAFRAAVVPWESATEVARYLQELLKRKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(3795603..3795647,3796516..3797268)
location: region:3795603-3797268:1
so has part: feature:3795603-3795647:1:exon
so has part: feature:3796516-3797268:1:exon

XP_039420571.1
type: Protein
SIO_000068: ncbiprotein

position:3795603:1
position: 3795603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3797268:1
position: 3797268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3795603-3795647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3796516-3797268:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MRRCCEGVGLPCLFKGVGMAGARPPRFLLVFDFDETIVDENSDDSVVRGRALPEQLRQSPREGSYNEHMQRVLAFLGEQGLRAADFRAVYENIPLSPGMAELFQFLSKHHELFEVILISDANMFGIEAKLRAAGVRSLFRKIFSNPASFDRRGFLTLGPYHSHKCLQCPANMCKRKILTEYLAERAQEEVEFQRVFYVGDGANDFCPSGTLTAADVAFPRKGYPMHRMIQEIQEKQPGAFRAAVVPWESATEVARYLQELLKRKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(3795603..3795647,3796516..3797268)
location: region:3795603-3797268:1
so has part: feature:3795603-3795647:1:exon
so has part: feature:3796516-3797268:1:exon

XP_039420572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3795603-3795647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3796516-3797268:1:exon

ABI3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3798418..3803129)
location: region:3798418-3803129:-1
so has part: feature:3798418-3803129:-1:exon
subclass of: SO_0000010

104683626
type: Gene
SIO_000068: ncbigene

position:3798418:-1
position: 3798418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3803129:-1
position: 3803129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3798418-3803129:-1:exon

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ABI3
product: ABI family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039564636.1
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(3798418..3799091,3799264..3799386,3799504..3799706,3799986..3800081,3800195..3800280,3800954..3801130,3801782..3801949,3802925..3803129))
location: region:3798418-3803129:-1
so has part: feature:3802925-3803129:-1:exon
so has part: feature:3801782-3801949:-1:exon
so has part: feature:3800954-3801130:-1:exon
so has part: feature:3800195-3800280:-1:exon
so has part: feature:3799986-3800081:-1:exon
so has part: feature:3799504-3799706:-1:exon
so has part: feature:3799264-3799386:-1:exon
so has part: feature:3798418-3799091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3802925-3803129:-1:exon

position:3802925:-1
position: 3802925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3801782-3801949:-1:exon

position:3801782:-1
position: 3801782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801949:-1
position: 3801949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3800954-3801130:-1:exon

position:3800954:-1
position: 3800954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801130:-1
position: 3801130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3800195-3800280:-1:exon

position:3800195:-1
position: 3800195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3800280:-1
position: 3800280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3799986-3800081:-1:exon

position:3799986:-1
position: 3799986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3800081:-1
position: 3800081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3799504-3799706:-1:exon

position:3799504:-1
position: 3799504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3799706:-1
position: 3799706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3799264-3799386:-1:exon

position:3799264:-1
position: 3799264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3799386:-1
position: 3799386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3798418-3799091:-1:exon

position:3799091:-1
position: 3799091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3
translation: MSELEQLRQRDIPEGQQLLRDQHDNLHRVAEYCHSNYLQASDKRKALEETMALSTQSLASVTYQVSSLATAFLRLLDLQAAQLRQVEADVACVAQRVDIHKEKVSRREIGSLTISKRFPTYQKIVAPPNPPVLEPYYRKPLNFSVLDDIGHGIKDTSTQLSRTGTLARKSTKSSSAQAAGTLGRSTRVPEPIQPPVVPEGKLSAASSTSSLVSVSSSGAPAAPGEGIPAPPPLPGPSLLAPSPPGPPPPPAAAVPPPPPLPEDLLPPPPGDLAVPPPDLLPPAPDDLELLPPPSAVPDFEDLALPPPPAAEDPPWAPENYLEKVVALYPYTRQKDNELSFEPGTLLFVTRRYSDGWCEGVMGQEEGFFPGNYVEPF
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(3798931..3799091,3799264..3799386,3799504..3799706,3799986..3800081,3800195..3800280,3800954..3801130,3801782..3801949,3802925..3803041))
location: region:3798931-3803041:-1
so has part: feature:3802925-3803041:-1:exon
so has part: feature:3801782-3801949:-1:exon
so has part: feature:3800954-3801130:-1:exon
so has part: feature:3800195-3800280:-1:exon
so has part: feature:3799986-3800081:-1:exon
so has part: feature:3799504-3799706:-1:exon
so has part: feature:3799264-3799386:-1:exon
so has part: feature:3798931-3799091:-1:exon

XP_039420570.1
type: Protein
SIO_000068: ncbiprotein

position:3798931:-1
position: 3798931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3803041:-1
position: 3803041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802925-3803041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801782-3801949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3800954-3801130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3800195-3800280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3799986-3800081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3799504-3799706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3799264-3799386:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3798931-3799091:-1:exon

GNGT2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3804276..3806847
location: region:3804276-3806847:1
so has part: feature:3804276-3806847:1:exon
subclass of: SO_0000010

109144279
type: Gene
SIO_000068: ncbigene

position:3804276:1
position: 3804276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3806847:1
position: 3806847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3804276-3806847:1:exon

GNGT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GNGT2
product: G protein subunit gamma transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039564639.1
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(3804276..3804408,3804836..3804931,3805317..3806847)
location: region:3804276-3806847:1
so has part: feature:3804276-3804408:1:exon
so has part: feature:3804836-3804931:1:exon
so has part: feature:3805317-3806847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3804276-3804408:1:exon

position:3804408:1
position: 3804408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3804836-3804931:1:exon

position:3804836:1
position: 3804836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3804931:1
position: 3804931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3805317-3806847:1:exon

position:3805317:1
position: 3805317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNGT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
translation: MAQDMTEKELLKMELDQLKKEVKNERQMVSKTGKEIKEYIESMSGEDPLLKGVPEDKNPFKEKGGCTIS
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(3804848..3804931,3805317..3805442)
location: region:3804848-3805442:1
so has part: feature:3804848-3804931:1:exon
so has part: feature:3805317-3805442:1:exon

XP_039420573.1
type: Protein
SIO_000068: ncbiprotein

position:3804848:1
position: 3804848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3805442:1
position: 3805442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3804848-3804931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3805317-3805442:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3808194..3808265)
location: region:3808194-3808265:-1
so has part: feature:3808194-3808265:-1:exon
subclass of: SO_0000663

120411234
type: Gene
SIO_000068: ncbigene

position:3808194:-1
position: 3808194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808265:-1
position: 3808265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3808194-3808265:-1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 932674
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3808230..3808232),aa:Gln, seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: complement(3808194..3808265)
location: region:3808194-3808265:-1
so has part: feature:3808194-3808265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3808194-3808265:-1:exon

IGF2BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3817388..3838716)
location: region:3817388-3838716:-1
so has part: feature:3817388-3838716:-1:exon
subclass of: SO_0000010

104683627
type: Gene
SIO_000068: ncbigene

position:3817388:-1
position: 3817388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3838716:-1
position: 3838716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817388-3838716:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564716.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(3817388..3818060,3818994..3819107,3819202..3819333,3819874..3819948,3820059..3820175,3820906..3821028,3821979..3822114,3823223..3823345,3823524..3823658,3824268..3824541,3825759..3825822,3826100..3826151,3826689..3826737,3837283..3837343,3838542..3838716))
location: region:3817388-3838716:-1
so has part: feature:3838542-3838716:-1:exon
so has part: feature:3837283-3837343:-1:exon
so has part: feature:3826689-3826737:-1:exon
so has part: feature:3826100-3826151:-1:exon
so has part: feature:3825759-3825822:-1:exon
so has part: feature:3824268-3824541:-1:exon
so has part: feature:3823524-3823658:-1:exon
so has part: feature:3823223-3823345:-1:exon
so has part: feature:3821979-3822114:-1:exon
so has part: feature:3820906-3821028:-1:exon
so has part: feature:3820059-3820175:-1:exon
so has part: feature:3819874-3819948:-1:exon
so has part: feature:3819202-3819333:-1:exon
so has part: feature:3818994-3819107:-1:exon
so has part: feature:3817388-3818060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3838542-3838716:-1:exon

position:3838542:-1
position: 3838542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3837283-3837343:-1:exon

position:3837283:-1
position: 3837283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3837343:-1
position: 3837343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3826689-3826737:-1:exon

position:3826689:-1
position: 3826689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3826737:-1
position: 3826737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3826100-3826151:-1:exon

position:3826100:-1
position: 3826100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3826151:-1
position: 3826151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3825759-3825822:-1:exon

position:3825759:-1
position: 3825759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3825822:-1
position: 3825822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3824268-3824541:-1:exon

position:3824268:-1
position: 3824268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3824541:-1
position: 3824541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3823524-3823658:-1:exon

position:3823524:-1
position: 3823524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823658:-1
position: 3823658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3823223-3823345:-1:exon

position:3823223:-1
position: 3823223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823345:-1
position: 3823345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3821979-3822114:-1:exon

position:3821979:-1
position: 3821979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3822114:-1
position: 3822114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3820906-3821028:-1:exon

position:3820906:-1
position: 3820906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3821028:-1
position: 3821028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3820059-3820175:-1:exon

position:3820059:-1
position: 3820059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820175:-1
position: 3820175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3819874-3819948:-1:exon

position:3819874:-1
position: 3819874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819948:-1
position: 3819948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3819202-3819333:-1:exon

position:3819202:-1
position: 3819202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819333:-1
position: 3819333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3818994-3819107:-1:exon

position:3818994:-1
position: 3818994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819107:-1
position: 3819107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3817388-3818060:-1:exon

position:3818060:-1
position: 3818060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IGF2BP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA-binding protein 1
translation: MNKLYIGNLPEGVTAAELEKVFTEHQISFSGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAITKLNGHQLENHALKVSYIPDEQPGPENGRRAFGARGAARPGSPTPAGAPPKQPPLDVPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACRMILDIMQKEAKDTKTAEEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSPESCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSTAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSSQSQSRRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(3817968..3818060,3818994..3819107,3819202..3819333,3819874..3819948,3820059..3820175,3820906..3821028,3821979..3822114,3823223..3823345,3823524..3823658,3824268..3824541,3825759..3825822,3826100..3826151,3826689..3826737,3837283..3837343,3838542..3838716))
location: region:3817968-3838716:-1
so has part: feature:3838542-3838716:-1:exon
so has part: feature:3837283-3837343:-1:exon
so has part: feature:3826689-3826737:-1:exon
so has part: feature:3826100-3826151:-1:exon
so has part: feature:3825759-3825822:-1:exon
so has part: feature:3824268-3824541:-1:exon
so has part: feature:3823524-3823658:-1:exon
so has part: feature:3823223-3823345:-1:exon
so has part: feature:3821979-3822114:-1:exon
so has part: feature:3820906-3821028:-1:exon
so has part: feature:3820059-3820175:-1:exon
so has part: feature:3819874-3819948:-1:exon
so has part: feature:3819202-3819333:-1:exon
so has part: feature:3818994-3819107:-1:exon
so has part: feature:3817968-3818060:-1:exon

XP_039420650.1
type: Protein
SIO_000068: ncbiprotein

position:3817968:-1
position: 3817968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838542-3838716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3837283-3837343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3826689-3826737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3826100-3826151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3825759-3825822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3824268-3824541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3823524-3823658:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3823223-3823345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3821979-3822114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3820906-3821028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3820059-3820175:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3819874-3819948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3819202-3819333:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3818994-3819107:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3817968-3818060:-1:exon

HOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3848235..3850168)
location: region:3848235-3850168:-1
so has part: feature:3848235-3850168:-1:exon
subclass of: SO_0000010

120411222
type: Gene
SIO_000068: ncbigene

position:3848235:-1
position: 3848235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3850168:-1
position: 3850168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3848235-3850168:-1:exon

HOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB1
product: homeobox B1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564717.1
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: complement(join(3848235..3848651,3849252..3850168))
location: region:3848235-3850168:-1
so has part: feature:3849252-3850168:-1:exon
so has part: feature:3848235-3848651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849252-3850168:-1:exon

position:3849252:-1
position: 3849252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3848235-3848651:-1:exon

position:3848651:-1
position: 3848651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B1
translation: MDNTRMNSFLEYAICNRGTGAYHHLEPGSPSFPPCSGSPGSDTLSFGLPGTAAAVAHLPQQSFHPPSCGRSGPFAGTTPGYPAQAXRPGYGHQQLYLGQQDADGPYFQAAGYPSGTGLGSGLAESYCGAAGQFQQQPLFGQEQPGYLPGLYGGLSPSLHEEQEPPGPPEPCPNAGAAQTFDWMRVKRNPPKTGKTSEFGLLGQPNAIRTNFSTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGLAPXTACRAAKEAAEASDQSNCTSPEASPSSGSS
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: complement(join(3848327..3848651,3849252..3849827))
location: region:3848327-3849827:-1
so has part: feature:3849252-3849827:-1:exon
so has part: feature:3848327-3848651:-1:exon

XP_039420651.1
type: Protein
SIO_000068: ncbiprotein

position:3848327:-1
position: 3848327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3849827:-1
position: 3849827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849252-3849827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848327-3848651:-1:exon

HOXB2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3858430..3861085)
location: region:3858430-3861085:-1
so has part: feature:3858430-3861085:-1:exon
subclass of: SO_0000010

120411225
type: Gene
SIO_000068: ncbigene

position:3858430:-1
position: 3858430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3861085:-1
position: 3861085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3858430-3861085:-1:exon

HOXB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB2
product: homeobox B2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039564725.1
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: complement(join(3858430..3859087,3860148..3861085))
location: region:3858430-3861085:-1
so has part: feature:3860148-3861085:-1:exon
so has part: feature:3858430-3859087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3860148-3861085:-1:exon

position:3860148:-1
position: 3860148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3858430-3859087:-1:exon

position:3859087:-1
position: 3859087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B2
translation: MNFEFEREIGFINSQPSLAECLTSLPAVLETFQTSSIKDSTLIPPPFEQTVLQSLNPCSGSQARPRSQKRASHGLLQPQPPAPAQPGPLAAEFPWMKEKKSSKKTTQAPSSSSPPSSSSVPVPAAGSPADTPGLADSSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHKETPDGELPFPGLDEGSDPAEEPEAAPAWGQPRERGGSAGASAEPPGVAAGEGSAGCESPVLPELSLFPAEPCLQLSQGFSPAAHGSLESPLRFSEEELDFFTSALCTIDLQHFNFQ
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: complement(join(3858517..3859087,3860148..3860535))
location: region:3858517-3860535:-1
so has part: feature:3860148-3860535:-1:exon
so has part: feature:3858517-3859087:-1:exon

XP_039420659.1
type: Protein
SIO_000068: ncbiprotein

position:3858517:-1
position: 3858517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3860535:-1
position: 3860535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3860148-3860535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3858517-3859087:-1:exon

HOXB3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3865481..3882192)
location: region:3865481-3882192:-1
so has part: feature:3865481-3882192:-1:exon
subclass of: SO_0000010

104683629
type: Gene
SIO_000068: ncbigene

position:3865481:-1
position: 3865481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882192:-1
position: 3882192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3865481-3882192:-1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB3
product: homeobox B3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039564708.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3865481..3867955,3869048..3869589,3875486..3875548,3880721..3882192))
location: region:3865481-3882192:-1
so has part: feature:3880721-3882192:-1:exon
so has part: feature:3875486-3875548:-1:exon
so has part: feature:3869048-3869589:-1:exon
so has part: feature:3865481-3867955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3880721-3882192:-1:exon

position:3880721:-1
position: 3880721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3875486-3875548:-1:exon

position:3875486:-1
position: 3875486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3875548:-1
position: 3875548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3869048-3869589:-1:exon

position:3869048:-1
position: 3869048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3869589:-1
position: 3869589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3865481-3867955:-1:exon

position:3867955:-1
position: 3867955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB3
product: homeobox B3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039564709.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3865481..3867955,3869048..3869589,3875486..3875570))
location: region:3865481-3875570:-1
so has part: feature:3875486-3875570:-1:exon
so has part: feature:3869048-3869589:-1:exon
so has part: feature:3865481-3867955:-1:exon

position:3875570:-1
position: 3875570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3875486-3875570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3869048-3869589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3865481-3867955:-1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB3
product: homeobox B3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_039564711.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3865481..3867955,3869048..3869589,3872647..3872707))
location: region:3865481-3872707:-1
so has part: feature:3872647-3872707:-1:exon
so has part: feature:3869048-3869589:-1:exon
so has part: feature:3865481-3867955:-1:exon

position:3872707:-1
position: 3872707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3872647-3872707:-1:exon

position:3872647:-1
position: 3872647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3869048-3869589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3865481-3867955:-1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB3
product: homeobox B3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039564710.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3865481..3867955,3869048..3872367))
location: region:3865481-3872367:-1
so has part: feature:3869048-3872367:-1:exon
so has part: feature:3865481-3867955:-1:exon

position:3872367:-1
position: 3872367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3869048-3872367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865481-3867955:-1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3
translation: MQKTTYYDSSTLFGGYSYGSANGFGYEGPQQPFQAASHMENDFQRSACSLQSLGNTAPHGKNKELNGSCMRPSLPPEPPGSPNANAVATSAGGSSNSQAGGGKSAPGKANLSASASLSKQIFPWMKESRQNSKQKNSSPSAETCSSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPPQPMQASAGFLNALHPMSGGYEAPSPPSFSKPHQNAYAVATTSYQPALKGCPGQQKYAAATGPAEYEPHVLQGNGVAYGTASMQGSPAYVGGNFVDSMAASGPSLYGLNHLPHHQAGGMDYGGVAPGQPHGPCESHPTYTELSSHHATSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3867189..3867955,3869048..3869471))
location: region:3867189-3869471:-1
so has part: feature:3869048-3869471:-1:exon
so has part: feature:3867189-3867955:-1:exon

XP_039420642.1
type: Protein
SIO_000068: ncbiprotein

position:3867189:-1
position: 3867189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3869471:-1
position: 3869471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3869048-3869471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867189-3867955:-1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3
translation: MQKTTYYDSSTLFGGYSYGSANGFGYEGPQQPFQAASHMENDFQRSACSLQSLGNTAPHGKNKELNGSCMRPSLPPEPPGSPNANAVATSAGGSSNSQAGGGKSAPGKANLSASASLSKQIFPWMKESRQNSKQKNSSPSAETCSSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPPQPMQASAGFLNALHPMSGGYEAPSPPSFSKPHQNAYAVATTSYQPALKGCPGQQKYAAATGPAEYEPHVLQGNGVAYGTASMQGSPAYVGGNFVDSMAASGPSLYGLNHLPHHQAGGMDYGGVAPGQPHGPCESHPTYTELSSHHATSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3867189..3867955,3869048..3869471))
location: region:3867189-3869471:-1
so has part: feature:3869048-3869471:-1:exon
so has part: feature:3867189-3867955:-1:exon

XP_039420643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3869048-3869471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867189-3867955:-1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3
translation: MQKTTYYDSSTLFGGYSYGSANGFGYEGPQQPFQAASHMENDFQRSACSLQSLGNTAPHGKNKELNGSCMRPSLPPEPPGSPNANAVATSAGGSSNSQAGGGKSAPGKANLSASASLSKQIFPWMKESRQNSKQKNSSPSAETCSSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPPQPMQASAGFLNALHPMSGGYEAPSPPSFSKPHQNAYAVATTSYQPALKGCPGQQKYAAATGPAEYEPHVLQGNGVAYGTASMQGSPAYVGGNFVDSMAASGPSLYGLNHLPHHQAGGMDYGGVAPGQPHGPCESHPTYTELSSHHATSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3867189..3867955,3869048..3869471))
location: region:3867189-3869471:-1
so has part: feature:3869048-3869471:-1:exon
so has part: feature:3867189-3867955:-1:exon

XP_039420644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3869048-3869471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867189-3867955:-1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3
translation: MQKTTYYDSSTLFGGYSYGSANGFGYEGPQQPFQAASHMENDFQRSACSLQSLGNTAPHGKNKELNGSCMRPSLPPEPPGSPNANAVATSAGGSSNSQAGGGKSAPGKANLSASASLSKQIFPWMKESRQNSKQKNSSPSAETCSSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPPQPMQASAGFLNALHPMSGGYEAPSPPSFSKPHQNAYAVATTSYQPALKGCPGQQKYAAATGPAEYEPHVLQGNGVAYGTASMQGSPAYVGGNFVDSMAASGPSLYGLNHLPHHQAGGMDYGGVAPGQPHGPCESHPTYTELSSHHATSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: complement(join(3867189..3867955,3869048..3869471))
location: region:3867189-3869471:-1
so has part: feature:3869048-3869471:-1:exon
so has part: feature:3867189-3867955:-1:exon

XP_039420645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3869048-3869471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867189-3867955:-1:exon

LOC120411221
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3873849..3876494
location: region:3873849-3876494:1
so has part: feature:3873849-3876494:1:exon
subclass of: SO_0000011

120411221
type: Gene
SIO_000068: ncbigene

position:3873849:1
position: 3873849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3876494:1
position: 3876494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3873849-3876494:1:exon

LOC120411221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411221
product: uncharacterized LOC120411221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005603607.1
SIO_010081: LOC120411221
subclass of: SO_0000673
so part of: LOC120411221
location: join(3873849..3874379,3874485..3875046,3875395..3875462,3876156..3876494)
location: region:3873849-3876494:1
so has part: feature:3873849-3874379:1:exon
so has part: feature:3874485-3875046:1:exon
so has part: feature:3875395-3875462:1:exon
so has part: feature:3876156-3876494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3873849-3874379:1:exon

position:3874379:1
position: 3874379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3874485-3875046:1:exon

position:3874485:1
position: 3874485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3875046:1
position: 3875046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3875395-3875462:1:exon

position:3875395:1
position: 3875395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3875462:1
position: 3875462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3876156-3876494:1:exon

position:3876156:1
position: 3876156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3892116..3923996)
location: region:3892116-3923996:-1
so has part: feature:3892116-3923996:-1:exon
subclass of: SO_0000010

120411200
type: Gene
SIO_000068: ncbigene

position:3892116:-1
position: 3892116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923996:-1
position: 3923996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3892116-3923996:-1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB4
product: homeobox B4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039564589.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3892116..3892404,3894357..3894783,3894917..3895113))
location: region:3892116-3895113:-1
so has part: feature:3894917-3895113:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3892116-3892404:-1:exon

position:3895113:-1
position: 3895113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894917-3895113:-1:exon

position:3894917:-1
position: 3894917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

position:3894357:-1
position: 3894357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894783:-1
position: 3894783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3892116-3892404:-1:exon

position:3892404:-1
position: 3892404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4 isoform X2
translation: MLGGPGRARAGQVSLSGARRAPRHWPALSHGLNFVHLTKLMAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYEPRSACKEQLYSSCQSSGHPAAVLSPRGHVHPPAGLQSHLSEPSQPREPGTPSPPPSCSQNSVNQSPPSSSCKEPVVYPWMKKVHVSTATNGKFLARHPKETELERGENKKRPDQNSTNTTKIPSGDWGALGHRGEGDKKKKKRKIGSSRWWTKKGRGWRVM
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3892181..3892404,3894357..3894783,3894917..3895030))
location: region:3892181-3895030:-1
so has part: feature:3894917-3895030:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3892181-3892404:-1:exon

XP_039420523.1
type: Protein
SIO_000068: ncbiprotein

position:3892181:-1
position: 3892181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895030:-1
position: 3895030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894917-3895030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3892181-3892404:-1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB4
product: homeobox B4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039564590.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3892643..3893478,3894357..3894783,3923919..3923996))
location: region:3892643-3923996:-1
so has part: feature:3923919-3923996:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3892643-3893478:-1:exon

position:3892643:-1
position: 3892643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3923919-3923996:-1:exon

position:3923919:-1
position: 3923919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3892643-3893478:-1:exon

position:3893478:-1
position: 3893478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB4
product: homeobox B4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039564591.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3892643..3893478,3894357..3894783,3907453..3907524))
location: region:3892643-3907524:-1
so has part: feature:3907453-3907524:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3892643-3893478:-1:exon

position:3907524:-1
position: 3907524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3907453-3907524:-1:exon

position:3907453:-1
position: 3907453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3892643-3893478:-1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB4
product: homeobox B4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039564588.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3892643..3893478,3894357..3894783,3894917..3895111))
location: region:3892643-3895111:-1
so has part: feature:3894917-3895111:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3892643-3893478:-1:exon

position:3895111:-1
position: 3895111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894917-3895111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3892643-3893478:-1:exon

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4 isoform X1
translation: MLGGPGRARAGQVSLSGARRAPRHWPALSHGLNFVHLTKLMAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYEPRSACKEQLYSSCQSSGHPAAVLSPRGHVHPPAGLQSHLSEPSQPREPGTPSPPPSCSQNSVNQSPPSSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNSSSSSGSLQMPQGASQTRSHGPAASL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3893162..3893478,3894357..3894783,3894917..3895030))
location: region:3893162-3895030:-1
so has part: feature:3894917-3895030:-1:exon
so has part: feature:3894357-3894783:-1:exon
so has part: feature:3893162-3893478:-1:exon

XP_039420522.1
type: Protein
SIO_000068: ncbiprotein

position:3893162:-1
position: 3893162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894917-3895030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3894357-3894783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3893162-3893478:-1:exon

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4 isoform X3
translation: MAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYEPRSACKEQLYSSCQSSGHPAAVLSPRGHVHPPAGLQSHLSEPSQPREPGTPSPPPSCSQNSVNQSPPSSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNSSSSSGSLQMPQGASQTRSHGPAASL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3893162..3893478,3894357..3894777))
location: region:3893162-3894777:-1
so has part: feature:3894357-3894777:-1:exon
so has part: feature:3893162-3893478:-1:exon

XP_039420524.1
type: Protein
SIO_000068: ncbiprotein

position:3894777:-1
position: 3894777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894357-3894777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3893162-3893478:-1:exon

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4 isoform X3
translation: MAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYEPRSACKEQLYSSCQSSGHPAAVLSPRGHVHPPAGLQSHLSEPSQPREPGTPSPPPSCSQNSVNQSPPSSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNSSSSSGSLQMPQGASQTRSHGPAASL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: complement(join(3893162..3893478,3894357..3894777))
location: region:3893162-3894777:-1
so has part: feature:3894357-3894777:-1:exon
so has part: feature:3893162-3893478:-1:exon

XP_039420525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3894357-3894777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3893162-3893478:-1:exon

HOXB5
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3909760..3911948)
location: region:3909760-3911948:-1
so has part: feature:3909760-3911948:-1:exon
subclass of: SO_0000010

120411201
type: Gene
SIO_000068: ncbigene

position:3909760:-1
position: 3909760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911948:-1
position: 3911948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909760-3911948:-1:exon

HOXB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB5
product: homeobox B5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_039564592.1
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: complement(join(3909760..3910050,3911062..3911948))
location: region:3909760-3911948:-1
so has part: feature:3911062-3911948:-1:exon
so has part: feature:3909760-3910050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3911062-3911948:-1:exon

position:3911062:-1
position: 3911062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3909760-3910050:-1:exon

position:3910050:-1
position: 3910050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B5
translation: MSSYFVNSFSGRYPNGPDYQLLNYGTSSSMNGSYRDSSTMHSSSYGYNYNGMDLSINRSASSSHFGAVGESSRGFPSPAQESRFRQASSCSLSSPDSLPCSNSESHGGKPAPSPSDQATSASTTNTNFTELDETSASSGADEGTPISSSIPRAQAEPIATSTAATEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: complement(join(3909803..3910050,3911062..3911611))
location: region:3909803-3911611:-1
so has part: feature:3911062-3911611:-1:exon
so has part: feature:3909803-3910050:-1:exon

XP_039420526.1
type: Protein
SIO_000068: ncbiprotein

position:3909803:-1
position: 3909803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911611:-1
position: 3911611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3911062-3911611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3909803-3910050:-1:exon

HOXB6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3914852..3924005)
location: region:3914852-3924005:-1
so has part: feature:3914852-3924005:-1:exon
subclass of: SO_0000010

104683619
type: Gene
SIO_000068: ncbigene

position:3914852:-1
position: 3914852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3924005:-1
position: 3924005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3914852-3924005:-1:exon

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB6
product: homeobox B6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039564596.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: complement(join(3914852..3915157,3916405..3916993,3923919..3924005))
location: region:3914852-3924005:-1
so has part: feature:3923919-3924005:-1:exon
so has part: feature:3916405-3916993:-1:exon
so has part: feature:3914852-3915157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3923919-3924005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3916405-3916993:-1:exon

position:3916405:-1
position: 3916405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916993:-1
position: 3916993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3914852-3915157:-1:exon

position:3915157:-1
position: 3915157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB6
product: homeobox B6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039564595.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: complement(join(3914852..3915157,3916405..3916993,3917600..3918240))
location: region:3914852-3918240:-1
so has part: feature:3917600-3918240:-1:exon
so has part: feature:3916405-3916993:-1:exon
so has part: feature:3914852-3915157:-1:exon

position:3918240:-1
position: 3918240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3917600-3918240:-1:exon

position:3917600:-1
position: 3917600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3916405-3916993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3914852-3915157:-1:exon

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPSTYGATGVQEKGYTSSPYYQQSNGAYGRGSACDYGAGGFFREKDPACAPPSLDEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKAAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: complement(join(3914898..3915157,3916405..3916813))
location: region:3914898-3916813:-1
so has part: feature:3916405-3916813:-1:exon
so has part: feature:3914898-3915157:-1:exon

XP_039420529.1
type: Protein
SIO_000068: ncbiprotein

position:3914898:-1
position: 3914898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916813:-1
position: 3916813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3916405-3916813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3914898-3915157:-1:exon

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPSTYGATGVQEKGYTSSPYYQQSNGAYGRGSACDYGAGGFFREKDPACAPPSLDEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKAAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: complement(join(3914898..3915157,3916405..3916813))
location: region:3914898-3916813:-1
so has part: feature:3916405-3916813:-1:exon
so has part: feature:3914898-3915157:-1:exon

XP_039420530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3916405-3916813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3914898-3915157:-1:exon

HOXB7
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3926618..3931443)
location: region:3926618-3931443:-1
so has part: feature:3926618-3931443:-1:exon
subclass of: SO_0000010

104683618
type: Gene
SIO_000068: ncbigene

position:3926618:-1
position: 3926618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931443:-1
position: 3931443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926618-3931443:-1:exon

HOXB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB7
product: homeobox B7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010390524.3
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: complement(join(3926618..3927667,3930511..3931443))
location: region:3926618-3931443:-1
so has part: feature:3930511-3931443:-1:exon
so has part: feature:3926618-3927667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3930511-3931443:-1:exon

position:3930511:-1
position: 3930511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926618-3927667:-1:exon

position:3927667:-1
position: 3927667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B7
translation: MSSLYYANALFSKYQAASSVFPSGVFPEQTSCAFASNTQRAGYGAGSTPPFAASMPGLYSSGSAGPPQPPSMYSSGYGLEPGSFNMHCSPFEQNLSMMCPGDASKQNCSKTDQRDSDLQSDSNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTACPGSSGQEKPDAEDDEEE
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: complement(join(3927414..3927667,3930511..3930911))
location: region:3927414-3930911:-1
so has part: feature:3930511-3930911:-1:exon
so has part: feature:3927414-3927667:-1:exon

XP_010388826.2
type: Protein
SIO_000068: ncbiprotein

position:3927414:-1
position: 3927414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3930911:-1
position: 3930911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930511-3930911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927414-3927667:-1:exon

HOXB8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3932486..3935405)
location: region:3932486-3935405:-1
so has part: feature:3932486-3935405:-1:exon
subclass of: SO_0000010

120411202
type: Gene
SIO_000068: ncbigene

position:3932486:-1
position: 3932486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935405:-1
position: 3935405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3932486-3935405:-1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB8
product: homeobox B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039564593.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: complement(join(3932486..3933711,3934526..3935405))
location: region:3932486-3935405:-1
so has part: feature:3934526-3935405:-1:exon
so has part: feature:3932486-3933711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3934526-3935405:-1:exon

position:3934526:-1
position: 3934526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3932486-3933711:-1:exon

position:3933711:-1
position: 3933711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB8
product: homeobox B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039564594.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: complement(join(3932486..3933708,3934526..3935404))
location: region:3932486-3935404:-1
so has part: feature:3934526-3935404:-1:exon
so has part: feature:3932486-3933708:-1:exon

position:3935404:-1
position: 3935404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3934526-3935404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3932486-3933708:-1:exon

position:3933708:-1
position: 3933708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X2
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPPQIQEFYHGASSLSSSPYQQNPCAVACHGDPGNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKADKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: complement(join(3933404..3933708,3934526..3934946))
location: region:3933404-3934946:-1
so has part: feature:3934526-3934946:-1:exon
so has part: feature:3933404-3933708:-1:exon

XP_039420528.1
type: Protein
SIO_000068: ncbiprotein

position:3933404:-1
position: 3933404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3934946:-1
position: 3934946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3934526-3934946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3933404-3933708:-1:exon

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X1
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPPQIQEFYHGASSLSSSPYQQNPCAVACHGDPGNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKADKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: complement(join(3933404..3933711,3934526..3934946))
location: region:3933404-3934946:-1
so has part: feature:3934526-3934946:-1:exon
so has part: feature:3933404-3933711:-1:exon

XP_039420527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3934526-3934946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3933404-3933711:-1:exon

HOXB9
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3943389..3948156)
location: region:3943389-3948156:-1
so has part: feature:3943389-3948156:-1:exon
subclass of: SO_0000010

109143374
type: Gene
SIO_000068: ncbigene

position:3943389:-1
position: 3943389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3948156:-1
position: 3948156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943389-3948156:-1:exon

HOXB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB9
product: homeobox B9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039564714.1
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: complement(join(3943389..3944172,3947459..3948156))
location: region:3943389-3948156:-1
so has part: feature:3947459-3948156:-1:exon
so has part: feature:3943389-3944172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3947459-3948156:-1:exon

position:3947459:-1
position: 3947459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3943389-3944172:-1:exon

position:3944172:-1
position: 3944172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9
translation: MSISGTLSNYYVDSIISHESEDSPSAKFSSGQYSGSRQAGHSEHLEFPSCSFQPKPPVFSASWTPLNPHSSGTLPAVYHPYIQHQSVPAESRYLRSWLEPVPRAETLPGQGSVKAEPLLGRPGDVHKQGTQEYNLETSAAREGIVSNQRPSFEDNKVCEGSEDKDRTDQTNPAASWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: complement(join(3943937..3944172,3947459..3947966))
location: region:3943937-3947966:-1
so has part: feature:3947459-3947966:-1:exon
so has part: feature:3943937-3944172:-1:exon

XP_039420648.1
type: Protein
SIO_000068: ncbiprotein

position:3943937:-1
position: 3943937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947966:-1
position: 3947966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3947459-3947966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3943937-3944172:-1:exon

HOXB13
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3988871..3990410)
location: region:3988871-3990410:-1
so has part: feature:3988871-3990410:-1:exon
subclass of: SO_0000010

120411194
type: Gene
SIO_000068: ncbigene

position:3988871:-1
position: 3988871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3990410:-1
position: 3990410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3988871-3990410:-1:exon

HOXB13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HOXB13
product: homeobox B13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_039564574.1
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: complement(join(3988871..3989130,3989951..3990410))
location: region:3988871-3990410:-1
so has part: feature:3989951-3990410:-1:exon
so has part: feature:3988871-3989130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3989951-3990410:-1:exon

position:3989951:-1
position: 3989951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3988871-3989130:-1:exon

position:3989130:-1
position: 3989130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13
translation: MNPGYPPEAPPEPPKAPPPPPGPAASAPLPYGYFGSGYYSCRVARSSLKAGPAQGPFPAEKYLEPAAGSEDFQSRPAEFAFYPGYGAPYQPVAGYLDVSVVPGLGAPGEARHETLLPVDGYHQPWALGGGWSGQMCCPKEQGQAGYLLKSAFAESGGQCPPDGCAFRRGRKKRVPYSKGQLKELEKEYASSKFITRDKRRKISAATNLTERQITIWFQNRRVKEKKVVAKIKSSTSGTP
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: complement(join(3988871..3989130,3989951..3990410))
location: region:3988871-3990410:-1
so has part: feature:3989951-3990410:-1:exon
so has part: feature:3988871-3989130:-1:exon

XP_039420508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3989951-3990410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3988871-3989130:-1:exon

CALCOCO2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4016171..4026505)
location: region:4016171-4026505:-1
so has part: feature:4016171-4026505:-1:exon
subclass of: SO_0000010

104683628
type: Gene
SIO_000068: ncbigene

position:4016171:-1
position: 4016171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026505:-1
position: 4026505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016171-4026505:-1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564575.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: complement(join(4016171..4019051,4020183..4020214,4020563..4020698,4021223..4021255,4021391..4021483,4022201..4022327,4022849..4022939,4023031..4023296,4024999..4025187,4026332..4026505))
location: region:4016171-4026505:-1
so has part: feature:4026332-4026505:-1:exon
so has part: feature:4024999-4025187:-1:exon
so has part: feature:4023031-4023296:-1:exon
so has part: feature:4022849-4022939:-1:exon
so has part: feature:4022201-4022327:-1:exon
so has part: feature:4021391-4021483:-1:exon
so has part: feature:4021223-4021255:-1:exon
so has part: feature:4020563-4020698:-1:exon
so has part: feature:4020183-4020214:-1:exon
so has part: feature:4016171-4019051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026332-4026505:-1:exon

position:4026332:-1
position: 4026332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4024999-4025187:-1:exon

position:4024999:-1
position: 4024999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025187:-1
position: 4025187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4023031-4023296:-1:exon

position:4023031:-1
position: 4023031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023296:-1
position: 4023296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4022849-4022939:-1:exon

position:4022849:-1
position: 4022849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4022939:-1
position: 4022939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4022201-4022327:-1:exon

position:4022201:-1
position: 4022201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4022327:-1
position: 4022327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4021391-4021483:-1:exon

position:4021391:-1
position: 4021391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021483:-1
position: 4021483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4021223-4021255:-1:exon

position:4021223:-1
position: 4021223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021255:-1
position: 4021255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4020563-4020698:-1:exon

position:4020563:-1
position: 4020563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020698:-1
position: 4020698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4020183-4020214:-1:exon

position:4020183:-1
position: 4020183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020214:-1
position: 4020214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4016171-4019051:-1:exon

position:4019051:-1
position: 4019051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALCOCO2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calcium-binding and coiled-coil domain-containing protein 2
translation: MSRCLSPNYESQQRRARPGVGPGRASRAGAGGGSAYSRSSVAPAAPEPPGRPSNSSMEDSPEEPPSSCVLLERCHFSQVLFTNVEKFYVPGTDVTCHYSLSPGIVPRGKDWVGIFQSSLRFSQGSTGLKQGGKEGFWGGIFGGFCSPGAEQDLLFGAPSGSQELQEALESLRSSTERLELELNSLKSENRALKEQGGCREAELQRLKEQIQGVNSDKERLEGRLRAALEHLDQLQSKVSDYEKEVENLSRAEQDKTKQLQSLKGENQELLQTSAQHQDLFPRPFFPQNQPRDVLEQLREQQGRIQALQEEKAGAKKENQDLRDENEVLRRELSRLQRISPGSAPSAAPSPAPAEGELLFGNPYSAAGGKLGAGAEPSLRKCPICEEVFPEDLPMGDLEEHIQSHLLECPICSESFDGASPQVFRDHIFCHSLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: complement(join(4018875..4019051,4020183..4020214,4020563..4020698,4021223..4021255,4021391..4021483,4022201..4022327,4022849..4022939,4023031..4023296,4024999..4025187,4026332..4026490))
location: region:4018875-4026490:-1
so has part: feature:4026332-4026490:-1:exon
so has part: feature:4024999-4025187:-1:exon
so has part: feature:4023031-4023296:-1:exon
so has part: feature:4022849-4022939:-1:exon
so has part: feature:4022201-4022327:-1:exon
so has part: feature:4021391-4021483:-1:exon
so has part: feature:4021223-4021255:-1:exon
so has part: feature:4020563-4020698:-1:exon
so has part: feature:4020183-4020214:-1:exon
so has part: feature:4018875-4019051:-1:exon

XP_039420509.1
type: Protein
SIO_000068: ncbiprotein

position:4018875:-1
position: 4018875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026490:-1
position: 4026490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026332-4026490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4024999-4025187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4023031-4023296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022849-4022939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4022201-4022327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4021391-4021483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021223-4021255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4020563-4020698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4020183-4020214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4018875-4019051:-1:exon

ATP5MC1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4027514..4030529
location: region:4027514-4030529:1
so has part: feature:4027514-4030529:1:exon
subclass of: SO_0000010

109143373
type: Gene
SIO_000068: ncbigene

position:4027514:1
position: 4027514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030529:1
position: 4030529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4027514-4030529:1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564715.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(4027514..4027613,4028230..4028278,4029000..4029077,4029172..4029347,4030313..4030529)
location: region:4027514-4030529:1
so has part: feature:4027514-4027613:1:exon
so has part: feature:4028230-4028278:1:exon
so has part: feature:4029000-4029077:1:exon
so has part: feature:4029172-4029347:1:exon
so has part: feature:4030313-4030529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4027514-4027613:1:exon

position:4027613:1
position: 4027613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4028230-4028278:1:exon

position:4028230:1
position: 4028230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028278:1
position: 4028278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4029000-4029077:1:exon

position:4029000:1
position: 4029000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4029077:1
position: 4029077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4029172-4029347:1:exon

position:4029172:1
position: 4029172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4029347:1
position: 4029347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4030313-4030529:1:exon

position:4030313:1
position: 4030313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial
translation: MQAPVALLGSPVLFRCCSRALARPVSVSVFGRPEPQTAQAAAVPSPQLLRRHFQSSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(4028240..4028278,4029000..4029077,4029172..4029347,4030313..4030427)
location: region:4028240-4030427:1
so has part: feature:4028240-4028278:1:exon
so has part: feature:4029000-4029077:1:exon
so has part: feature:4029172-4029347:1:exon
so has part: feature:4030313-4030427:1:exon

XP_039420649.1
type: Protein
SIO_000068: ncbiprotein

position:4028240:1
position: 4028240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030427:1
position: 4030427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4028240-4028278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4029000-4029077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4029172-4029347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4030313-4030427:1:exon

UBE2Z
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4032607..4042186
location: region:4032607-4042186:1
so has part: feature:4032607-4042186:1:exon
subclass of: SO_0000010

120411211
type: Gene
SIO_000068: ncbigene

position:4032607:1
position: 4032607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4042186:1
position: 4042186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032607-4042186:1:exon

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564665.1
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: join(4032607..4032929,4034762..4034834,4036666..4036853,4037370..4037481,4038243..4038355,4038681..4038771,4039853..4042186)
location: region:4032607-4042186:1
so has part: feature:4032607-4032929:1:exon
so has part: feature:4034762-4034834:1:exon
so has part: feature:4036666-4036853:1:exon
so has part: feature:4037370-4037481:1:exon
so has part: feature:4038243-4038355:1:exon
so has part: feature:4038681-4038771:1:exon
so has part: feature:4039853-4042186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4032607-4032929:1:exon

position:4032929:1
position: 4032929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4034762-4034834:1:exon

position:4034762:1
position: 4034762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034834:1
position: 4034834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4036666-4036853:1:exon

position:4036666:1
position: 4036666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4036853:1
position: 4036853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4037370-4037481:1:exon

position:4037370:1
position: 4037370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4037481:1
position: 4037481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4038243-4038355:1:exon

position:4038243:1
position: 4038243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4038355:1
position: 4038355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4038681-4038771:1:exon

position:4038681:1
position: 4038681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4038771:1
position: 4038771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4039853-4042186:1:exon

position:4039853:1
position: 4039853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z
translation: MAESPAAEDAAPAPAAVLAAGGGSASPSAAGAAGTPGVFIPAELWAAAGFGAAAAPGTGVAPGSGGAPMAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYNECIRHETIRVAVCDMLEGKCPCPEPLRGVMEKSFMEYYDFYEGVCKERLYLQGQTMQDPFGEKRGHFDYQALLLRLQGIRQRLQDKHQQESAEMDSESSSSEPETDTQGCSKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: join(4032607..4032929,4034762..4034834,4036666..4036853,4037370..4037481,4038243..4038355,4038681..4038771,4039853..4040023)
location: region:4032607-4040023:1
so has part: feature:4032607-4032929:1:exon
so has part: feature:4034762-4034834:1:exon
so has part: feature:4036666-4036853:1:exon
so has part: feature:4037370-4037481:1:exon
so has part: feature:4038243-4038355:1:exon
so has part: feature:4038681-4038771:1:exon
so has part: feature:4039853-4040023:1:exon

XP_039420599.1
type: Protein
SIO_000068: ncbiprotein

position:4040023:1
position: 4040023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032607-4032929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4034762-4034834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4036666-4036853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4037370-4037481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4038243-4038355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4038681-4038771:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4039853-4040023:1:exon

NXPH3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4172951..4175454
location: region:4172951-4175454:1
so has part: feature:4172951-4175454:1:exon
subclass of: SO_0000010

120411226
type: Gene
SIO_000068: ncbigene

position:4172951:1
position: 4172951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175454:1
position: 4175454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4172951-4175454:1:exon

NXPH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NXPH3
product: neurexophilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039564726.1
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: join(4172951..4173157,4174025..4175454)
location: region:4172951-4175454:1
so has part: feature:4172951-4173157:1:exon
so has part: feature:4174025-4175454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4172951-4173157:1:exon

position:4173157:1
position: 4173157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4174025-4175454:1:exon

position:4174025:1
position: 4174025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NXPH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-3
translation: MHLPRSCVLLLLQGSIALLVFCAPEEPGKGADQGEPRSRGRAAVPKLRELLSPKPLPSLGPAPPQNRPLLGLGSGSRELWGVLENRPGRDLAPRAPRDLGPASGRLQKLFGWGDFYSNIKTVKLNLLITGKVVDHGNGTVNVFFQHNSTGHGNISVSLVPPTKAVEFDLEQQIFIEAKESKVFNCRVESEQVARARKTSLCTYDPAKTCSQEHTRSRAAWLCSQPFKVVCVYITFYSPDYRLVQKVCPDYNAHSRRPYFPSG
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: join(4173101..4173157,4174025..4174756)
location: region:4173101-4174756:1
so has part: feature:4173101-4173157:1:exon
so has part: feature:4174025-4174756:1:exon

XP_039420660.1
type: Protein
SIO_000068: ncbiprotein

position:4173101:1
position: 4173101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4174756:1
position: 4174756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4173101-4173157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4174025-4174756:1:exon

LOC104683624
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104683624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4180678..4199353)
location: region:4180678-4199353:-1
so has part: feature:4180678-4199353:-1:exon
subclass of: SO_0000010

104683624
type: Gene
SIO_000068: ncbigene

position:4180678:-1
position: 4180678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4199353:-1
position: 4199353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4180678-4199353:-1:exon

LOC104683624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104683624
product: speckle type BTB/POZ protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564641.1
SIO_010081: LOC104683624
subclass of: SO_0000673
so part of: LOC104683624
location: complement(join(4180678..4181831,4182921..4183063,4185103..4185225,4185635..4185690,4186364..4186541,4188459..4188586,4188687..4188838,4190135..4190256,4193150..4193285,4199041..4199353))
location: region:4180678-4199353:-1
so has part: feature:4199041-4199353:-1:exon
so has part: feature:4193150-4193285:-1:exon
so has part: feature:4190135-4190256:-1:exon
so has part: feature:4188687-4188838:-1:exon
so has part: feature:4188459-4188586:-1:exon
so has part: feature:4186364-4186541:-1:exon
so has part: feature:4185635-4185690:-1:exon
so has part: feature:4185103-4185225:-1:exon
so has part: feature:4182921-4183063:-1:exon
so has part: feature:4180678-4181831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4199041-4199353:-1:exon

position:4199041:-1
position: 4199041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4193150-4193285:-1:exon

position:4193150:-1
position: 4193150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193285:-1
position: 4193285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4190135-4190256:-1:exon

position:4190135:-1
position: 4190135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190256:-1
position: 4190256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4188687-4188838:-1:exon

position:4188687:-1
position: 4188687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188838:-1
position: 4188838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4188459-4188586:-1:exon

position:4188459:-1
position: 4188459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188586:-1
position: 4188586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4186364-4186541:-1:exon

position:4186364:-1
position: 4186364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186541:-1
position: 4186541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4185635-4185690:-1:exon

position:4185635:-1
position: 4185635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4185690:-1
position: 4185690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4185103-4185225:-1:exon

position:4185103:-1
position: 4185103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4185225:-1
position: 4185225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4182921-4183063:-1:exon

position:4182921:-1
position: 4182921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183063:-1
position: 4183063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4180678-4181831:-1:exon

position:4181831:-1
position: 4181831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104683624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104683624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFKGHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC104683624
subclass of: SO_0000673
so part of: LOC104683624
location: complement(join(4181687..4181831,4182921..4183063,4185103..4185225,4185635..4185690,4186364..4186541,4188459..4188586,4188687..4188838,4190135..4190256,4193150..4193227))
location: region:4181687-4193227:-1
so has part: feature:4193150-4193227:-1:exon
so has part: feature:4190135-4190256:-1:exon
so has part: feature:4188687-4188838:-1:exon
so has part: feature:4188459-4188586:-1:exon
so has part: feature:4186364-4186541:-1:exon
so has part: feature:4185635-4185690:-1:exon
so has part: feature:4185103-4185225:-1:exon
so has part: feature:4182921-4183063:-1:exon
so has part: feature:4181687-4181831:-1:exon

XP_039420575.1
type: Protein
SIO_000068: ncbiprotein

position:4181687:-1
position: 4181687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193227:-1
position: 4193227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193150-4193227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190135-4190256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4188687-4188838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188459-4188586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186364-4186541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4185635-4185690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4185103-4185225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4182921-4183063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4181687-4181831:-1:exon

SLC35B1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4206650..4210324)
location: region:4206650-4210324:-1
so has part: feature:4206650-4210324:-1:exon
subclass of: SO_0000010

104683623
type: Gene
SIO_000068: ncbigene

position:4206650:-1
position: 4206650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4210324:-1
position: 4210324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4206650-4210324:-1:exon

SLC35B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC35B1
product: solute carrier family 35 member B1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564713.1
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: complement(join(4206650..4207010,4207239..4207392,4207717..4207823,4208342..4208468,4208801..4208958,4209187..4209217,4209561..4209692,4209764..4209867,4210143..4210324))
location: region:4206650-4210324:-1
so has part: feature:4210143-4210324:-1:exon
so has part: feature:4209764-4209867:-1:exon
so has part: feature:4209561-4209692:-1:exon
so has part: feature:4209187-4209217:-1:exon
so has part: feature:4208801-4208958:-1:exon
so has part: feature:4208342-4208468:-1:exon
so has part: feature:4207717-4207823:-1:exon
so has part: feature:4207239-4207392:-1:exon
so has part: feature:4206650-4207010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4210143-4210324:-1:exon

position:4210143:-1
position: 4210143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4209764-4209867:-1:exon

position:4209764:-1
position: 4209764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209867:-1
position: 4209867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4209561-4209692:-1:exon

position:4209561:-1
position: 4209561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209692:-1
position: 4209692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4209187-4209217:-1:exon

position:4209187:-1
position: 4209187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209217:-1
position: 4209217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4208801-4208958:-1:exon

position:4208801:-1
position: 4208801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4208958:-1
position: 4208958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4208342-4208468:-1:exon

position:4208342:-1
position: 4208342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4208468:-1
position: 4208468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4207717-4207823:-1:exon

position:4207717:-1
position: 4207717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4207823:-1
position: 4207823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4207239-4207392:-1:exon

position:4207239:-1
position: 4207239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4207392:-1
position: 4207392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4206650-4207010:-1:exon

position:4207010:-1
position: 4207010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC35B1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: solute carrier family 35 member B1
translation: MRPPGTPRDVALEVPPALSGPAATMGASAAAGLPERLRLPVCFLGVFACYFYYGILQESITRGRYGEGAKQEKFKYALTLVFIQCVINAAFAKLLIRFVDAARADRTRGWLYGACSLSYLGAMVSSNSALQFVSYPTQVLGKSCKPIPVMLLGVTLLRKRYPPAKYLCVLLIVAGVALFLYKPKKGTGDTEHVFGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNVNLWSTLFLGAGILFTGELWEFLSFTERYPSIISNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVVLFANPISPMQWVGTILVFLGLGLDAKFGKGVKKTSH
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: complement(join(4206958..4207010,4207239..4207392,4207717..4207823,4208342..4208468,4208801..4208958,4209187..4209217,4209561..4209692,4209764..4209867,4210143..4210321))
location: region:4206958-4210321:-1
so has part: feature:4210143-4210321:-1:exon
so has part: feature:4209764-4209867:-1:exon
so has part: feature:4209561-4209692:-1:exon
so has part: feature:4209187-4209217:-1:exon
so has part: feature:4208801-4208958:-1:exon
so has part: feature:4208342-4208468:-1:exon
so has part: feature:4207717-4207823:-1:exon
so has part: feature:4207239-4207392:-1:exon
so has part: feature:4206958-4207010:-1:exon

XP_039420647.1
type: Protein
SIO_000068: ncbiprotein

position:4206958:-1
position: 4206958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4210321:-1
position: 4210321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4210143-4210321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4209764-4209867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209561-4209692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4209187-4209217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4208801-4208958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4208342-4208468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4207717-4207823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4207239-4207392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4206958-4207010:-1:exon

KAT7
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4211541..4221410
location: region:4211541-4221410:1
so has part: feature:4211541-4221410:1:exon
subclass of: SO_0000010

104683622
type: Gene
SIO_000068: ncbigene

position:4211541:1
position: 4211541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221410:1
position: 4221410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4211541-4221410:1:exon

KAT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KAT7
product: lysine acetyltransferase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564649.1
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(4211541..4211731,4213085..4213232,4213673..4213849,4213985..4214224,4214702..4214784,4215013..4215102,4215663..4215761,4215899..4216009,4216904..4217095,4217303..4217392,4217732..4217872,4218269..4218362,4218503..4218649,4219212..4219318,4219857..4221410)
location: region:4211541-4221410:1
so has part: feature:4211541-4211731:1:exon
so has part: feature:4213085-4213232:1:exon
so has part: feature:4213673-4213849:1:exon
so has part: feature:4213985-4214224:1:exon
so has part: feature:4214702-4214784:1:exon
so has part: feature:4215013-4215102:1:exon
so has part: feature:4215663-4215761:1:exon
so has part: feature:4215899-4216009:1:exon
so has part: feature:4216904-4217095:1:exon
so has part: feature:4217303-4217392:1:exon
so has part: feature:4217732-4217872:1:exon
so has part: feature:4218269-4218362:1:exon
so has part: feature:4218503-4218649:1:exon
so has part: feature:4219212-4219318:1:exon
so has part: feature:4219857-4221410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4211541-4211731:1:exon

position:4211731:1
position: 4211731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4213085-4213232:1:exon

position:4213085:1
position: 4213085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213232:1
position: 4213232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4213673-4213849:1:exon

position:4213673:1
position: 4213673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213849:1
position: 4213849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4213985-4214224:1:exon

position:4213985:1
position: 4213985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214224:1
position: 4214224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4214702-4214784:1:exon

position:4214702:1
position: 4214702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214784:1
position: 4214784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4215013-4215102:1:exon

position:4215013:1
position: 4215013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215102:1
position: 4215102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4215663-4215761:1:exon

position:4215663:1
position: 4215663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215761:1
position: 4215761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4215899-4216009:1:exon

position:4215899:1
position: 4215899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4216009:1
position: 4216009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4216904-4217095:1:exon

position:4216904:1
position: 4216904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217095:1
position: 4217095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4217303-4217392:1:exon

position:4217303:1
position: 4217303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217392:1
position: 4217392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4217732-4217872:1:exon

position:4217732:1
position: 4217732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217872:1
position: 4217872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4218269-4218362:1:exon

position:4218269:1
position: 4218269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4218362:1
position: 4218362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4218503-4218649:1:exon

position:4218503:1
position: 4218503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4218649:1
position: 4218649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4219212-4219318:1:exon

position:4219212:1
position: 4219212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219318:1
position: 4219318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4219857-4221410:1:exon

position:4219857:1
position: 4219857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT7
translation: MQRRKRNAGSSSDGTEDSDFSTDPEHTDSSESDGTSRRSARVTRSSARLSQSSQDSSPVRNPPAFGPDEPVYSTRRVTRSQQQPAPVTPKKYPLRQTRSSGSETEQAVDFSDRDTKNAADHDESPPRTPTGNAPSSESDIDISSPNVSHDESIAKDMSMKDSGSDLSHRPKRRRFHESYNFNMKCPTPGCNSLGHLTGKHERHFSISGCPLYHNLSADECKVRAQSRDKQIEERMLAHRQDDNNRHATRHQAPTERQLRYKEKVAELRKKRNSGLSKEQKEKYMEHRQTYGNTREPLLENLTSEYDLELFRRAQARASEDLEKLRLQGQITEGSNMIKTIAFGRYELDTWYHSPYPEEYARLGRLYMCEFCLKYMKSQTILRRHMAKCVWKHPPGDEIYRKGSISVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTEADNTGCHLIGYFSKEKNSFLNYNVSCILTMPQYMRQGYGKMLIDFSYLLSKVEEKVGSPERPLSDLGLISYRSYWKEVLLRYLHNFQGKEISIKEISQETAVNPVDIVSTLQALQMLKYWKGKHLVLKRQDLIDEWIAKEAKRSNSNKTMDPSCLKWTPPKGT
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(4211717..4211731,4213085..4213232,4213673..4213849,4213985..4214224,4214702..4214784,4215013..4215102,4215663..4215761,4215899..4216009,4216904..4217095,4217303..4217392,4217732..4217872,4218269..4218362,4218503..4218649,4219212..4219318,4219857..4219958)
location: region:4211717-4219958:1
so has part: feature:4211717-4211731:1:exon
so has part: feature:4213085-4213232:1:exon
so has part: feature:4213673-4213849:1:exon
so has part: feature:4213985-4214224:1:exon
so has part: feature:4214702-4214784:1:exon
so has part: feature:4215013-4215102:1:exon
so has part: feature:4215663-4215761:1:exon
so has part: feature:4215899-4216009:1:exon
so has part: feature:4216904-4217095:1:exon
so has part: feature:4217303-4217392:1:exon
so has part: feature:4217732-4217872:1:exon
so has part: feature:4218269-4218362:1:exon
so has part: feature:4218503-4218649:1:exon
so has part: feature:4219212-4219318:1:exon
so has part: feature:4219857-4219958:1:exon

XP_039420583.1
type: Protein
SIO_000068: ncbiprotein

position:4211717:1
position: 4211717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219958:1
position: 4219958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4211717-4211731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4213085-4213232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4213673-4213849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4213985-4214224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4214702-4214784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4215013-4215102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4215663-4215761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4215899-4216009:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4216904-4217095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4217303-4217392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4217732-4217872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4218269-4218362:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4218503-4218649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4219212-4219318:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4219857-4219958:1:exon

LOC120411224
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4225413..4232664
location: region:4225413-4232664:1
so has part: feature:4225413-4232664:1:exon
subclass of: SO_0000011

120411224
type: Gene
SIO_000068: ncbigene

position:4225413:1
position: 4225413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232664:1
position: 4232664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4225413-4232664:1:exon

LOC120411224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411224
product: uncharacterized LOC120411224
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005603608.1
SIO_010081: LOC120411224
subclass of: SO_0000673
so part of: LOC120411224
location: join(4225413..4226011,4227294..4232664)
location: region:4225413-4232664:1
so has part: feature:4225413-4226011:1:exon
so has part: feature:4227294-4232664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4225413-4226011:1:exon

position:4226011:1
position: 4226011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4227294-4232664:1:exon

position:4227294:1
position: 4227294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109143376
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109143376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4247544..4249247
location: region:4247544-4249247:1
so has part: feature:4247544-4249247:1:exon
subclass of: SO_0000011

109143376
type: Gene
SIO_000068: ncbigene

position:4247544:1
position: 4247544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249247:1
position: 4249247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4247544-4249247:1:exon

LOC109143376
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109143376
product: uncharacterized LOC109143376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002043497.2
SIO_010081: LOC109143376
subclass of: SO_0000673
so part of: LOC109143376
location: join(4247544..4247648,4248262..4248348,4249024..4249247)
location: region:4247544-4249247:1
so has part: feature:4247544-4247648:1:exon
so has part: feature:4248262-4248348:1:exon
so has part: feature:4249024-4249247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4247544-4247648:1:exon

position:4247648:1
position: 4247648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4248262-4248348:1:exon

position:4248262:1
position: 4248262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4248348:1
position: 4248348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4249024-4249247:1:exon

position:4249024:1
position: 4249024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLX4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DLX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4257469..4260816
location: region:4257469-4260816:1
so has part: feature:4257469-4260816:1:exon
subclass of: SO_0000010

120411191
type: Gene
SIO_000068: ncbigene

position:4257469:1
position: 4257469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4260816:1
position: 4260816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257469-4260816:1:exon

DLX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DLX4
product: distal-less homeobox 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039564507.1
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: join(4257469..4257818,4258731..4258924,4260175..4260816)
location: region:4257469-4260816:1
so has part: feature:4257469-4257818:1:exon
so has part: feature:4258731-4258924:1:exon
so has part: feature:4260175-4260816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4257469-4257818:1:exon

position:4257818:1
position: 4257818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4258731-4258924:1:exon

position:4258731:1
position: 4258731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4258924:1
position: 4258924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4260175-4260816:1:exon

position:4260175:1
position: 4260175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DLX4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein DLX-4
translation: MTMSSVAETLLGTDPSKAAFLELCPPQHYPLHGLPPAGHPQHDPPPFSSYGRPGHFPYPGGAPPPPHGGPYLPYAPPGAPPAPAPGARLQDTEPEKPLAVSNGELRLGGKGKKLRKPRTIYSSLQLQALNQRFQQTQYLALPERAELAAQLGLTQTQVKIWFQNKRSKYKKIMKQVPSAPDGEQPPHSTPAVSPCSPSLPPLWDLPGPGKGPPLAPGGYINSFGAWYQPHPQDAIPRTPMM
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: join(4257542..4257818,4258731..4258924,4260175..4260430)
location: region:4257542-4260430:1
so has part: feature:4257542-4257818:1:exon
so has part: feature:4258731-4258924:1:exon
so has part: feature:4260175-4260430:1:exon

XP_039420441.1
type: Protein
SIO_000068: ncbiprotein

position:4257542:1
position: 4257542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4260430:1
position: 4260430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257542-4257818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4258731-4258924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4260175-4260430:1:exon

DLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4263217..4267384)
location: region:4263217-4267384:-1
so has part: feature:4263217-4267384:-1:exon
subclass of: SO_0000010

120411190
type: Gene
SIO_000068: ncbigene

position:4263217:-1
position: 4263217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267384:-1
position: 4267384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4263217-4267384:-1:exon

DLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DLX3
product: distal-less homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039564505.1
SIO_010081: DLX3
subclass of: SO_0000673
so part of: DLX3
location: complement(join(4263217..4264547,4266343..4266533,4266912..4267384))
location: region:4263217-4267384:-1
so has part: feature:4266912-4267384:-1:exon
so has part: feature:4266343-4266533:-1:exon
so has part: feature:4263217-4264547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4266912-4267384:-1:exon

position:4266912:-1
position: 4266912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4266343-4266533:-1:exon

position:4266343:-1
position: 4266343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266533:-1
position: 4266533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4263217-4264547:-1:exon

position:4264547:-1
position: 4264547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-3
translation: MSGSFDKKLSSILTDLSGSLSCHAASKDSPTLPESSVTDLGYYTGQHDYYPGQSYGQPVGHYPYPQFNLNGIGAAGTYSPKSEYSYSPSYRQYGHFREQQLPAQEAVSVKEEPEPEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPVWDSPGGSARTPLPQPLPYSSSPGFLEEHNPWYHPQSLSGPHGPHQAQAAPPMHHPSPGPPSTGAVY
SIO_010081: DLX3
subclass of: SO_0000673
so part of: DLX3
location: complement(join(4264221..4264547,4266343..4266533,4266912..4267230))
location: region:4264221-4267230:-1
so has part: feature:4266912-4267230:-1:exon
so has part: feature:4266343-4266533:-1:exon
so has part: feature:4264221-4264547:-1:exon

XP_039420439.1
type: Protein
SIO_000068: ncbiprotein

position:4264221:-1
position: 4264221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267230:-1
position: 4267230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4266912-4267230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266343-4266533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4264221-4264547:-1:exon

ITGA3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ITGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4271163..4284209
location: region:4271163-4284209:1
so has part: feature:4271163-4284209:1:exon
subclass of: SO_0000010

120411187
type: Gene
SIO_000068: ncbigene

position:4271163:1
position: 4271163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4284209:1
position: 4284209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4271163-4284209:1:exon

ITGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ITGA3
product: integrin subunit alpha 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039564502.1
SIO_010081: ITGA3
subclass of: SO_0000673
so part of: ITGA3
location: join(4271163..4271394,4276793..4276914,4276999..4277081,4277520..4277769,4277973..4278056,4278520..4278728,4279023..4279216,4279505..4279593,4279763..4279899,4279998..4280084,4280165..4280232,4280322..4280458,4280634..4280780,4280858..4280955,4281061..4281226,4281313..4281381,4281470..4281549,4281627..4281704,4281870..4281972,4282049..4282219,4282318..4282430,4282559..4282671,4282967..4283065,4283161..4283286,4283732..4283888,4284119..4284209)
location: region:4271163-4284209:1
so has part: feature:4271163-4271394:1:exon
so has part: feature:4276793-4276914:1:exon
so has part: feature:4276999-4277081:1:exon
so has part: feature:4277520-4277769:1:exon
so has part: feature:4277973-4278056:1:exon
so has part: feature:4278520-4278728:1:exon
so has part: feature:4279023-4279216:1:exon
so has part: feature:4279505-4279593:1:exon
so has part: feature:4279763-4279899:1:exon
so has part: feature:4279998-4280084:1:exon
so has part: feature:4280165-4280232:1:exon
so has part: feature:4280322-4280458:1:exon
so has part: feature:4280634-4280780:1:exon
so has part: feature:4280858-4280955:1:exon
so has part: feature:4281061-4281226:1:exon
so has part: feature:4281313-4281381:1:exon
so has part: feature:4281470-4281549:1:exon
so has part: feature:4281627-4281704:1:exon
so has part: feature:4281870-4281972:1:exon
so has part: feature:4282049-4282219:1:exon
so has part: feature:4282318-4282430:1:exon
so has part: feature:4282559-4282671:1:exon
so has part: feature:4282967-4283065:1:exon
so has part: feature:4283161-4283286:1:exon
so has part: feature:4283732-4283888:1:exon
so has part: feature:4284119-4284209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4271163-4271394:1:exon

position:4271394:1
position: 4271394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4276793-4276914:1:exon

position:4276793:1
position: 4276793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4276914:1
position: 4276914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4276999-4277081:1:exon

position:4276999:1
position: 4276999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277081:1
position: 4277081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4277520-4277769:1:exon

position:4277520:1
position: 4277520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277769:1
position: 4277769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4277973-4278056:1:exon

position:4277973:1
position: 4277973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278056:1
position: 4278056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4278520-4278728:1:exon

position:4278520:1
position: 4278520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278728:1
position: 4278728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4279023-4279216:1:exon

position:4279023:1
position: 4279023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279216:1
position: 4279216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4279505-4279593:1:exon

position:4279505:1
position: 4279505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279593:1
position: 4279593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4279763-4279899:1:exon

position:4279763:1
position: 4279763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279899:1
position: 4279899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4279998-4280084:1:exon

position:4279998:1
position: 4279998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4280084:1
position: 4280084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4280165-4280232:1:exon

position:4280165:1
position: 4280165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4280232:1
position: 4280232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4280322-4280458:1:exon

position:4280322:1
position: 4280322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4280458:1
position: 4280458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4280634-4280780:1:exon

position:4280634:1
position: 4280634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4280780:1
position: 4280780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4280858-4280955:1:exon

position:4280858:1
position: 4280858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4280955:1
position: 4280955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4281061-4281226:1:exon

position:4281061:1
position: 4281061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281226:1
position: 4281226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4281313-4281381:1:exon

position:4281313:1
position: 4281313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281381:1
position: 4281381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4281470-4281549:1:exon

position:4281470:1
position: 4281470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281549:1
position: 4281549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4281627-4281704:1:exon

position:4281627:1
position: 4281627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281704:1
position: 4281704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4281870-4281972:1:exon

position:4281870:1
position: 4281870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281972:1
position: 4281972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4282049-4282219:1:exon

position:4282049:1
position: 4282049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282219:1
position: 4282219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4282318-4282430:1:exon

position:4282318:1
position: 4282318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282430:1
position: 4282430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4282559-4282671:1:exon

position:4282559:1
position: 4282559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282671:1
position: 4282671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4282967-4283065:1:exon

position:4282967:1
position: 4282967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283065:1
position: 4283065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4283161-4283286:1:exon

position:4283161:1
position: 4283161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283286:1
position: 4283286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4283732-4283888:1:exon

position:4283732:1
position: 4283732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283888:1
position: 4283888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4284119-4284209:1:exon

position:4284119:1
position: 4284119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ITGA3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: integrin alpha-3
translation: MARSRRLLPPPLPGLLLGLGPVLLGAAAAFNLDRTFPVLKEGPAGALFGFSVALHRQTERLERSLLLVGAPQDAEPVNGTRTGAVYACPLSATTRDCQRLAIELKDEPDKAIIEDMWLGVTVASQRQPAGRVLACAHRYTRVLWSGAEAQRRMVGRCYIRGNDLRLDLGDEWQTYHNEMCNANTDTDETGMCQMGTSAGFSANIIYFGAPGAYNWQGTDYMLQREMWDLDDFSYPKEKIGNIYIGYTAEVGSAVLQRDDVTMVTGAPRYEHTGAVLLLSRGAQRTLNRSLLLPGPQVGSYFGSALALADLNNDGWQDLVVGAPYYFERKQEVGGAVFVYMNEAGGFQQLHSLILTGPSYSGFGFALASIGDVNQDGFQDIAVGAPFEGPGKVYIYHSSAEGLRDRPQQVISGSDLGPTEIKTFGYSLSGGLDMDGNSYPDLLVGSLSERIVLLRARPVINILDKTFTVTPSKVDPAQCTPKSCMTVTLCFSYNQSAGDPSYKERITLQYTLEADKDRHPPRVRFSGSQSATYTGSFSMPATRCQSQELLLLDNVRDKLHPIVLSMNYSLLEKPRKFQLGPHSLDAFPVLNQDQSHENETKIEFQKECGSDNQCYSNLQLQSSWVTEQSQPLPRVNGTQVLQYSRDVRKLHLSINISNVPTTPWNGEDAHEALLNVTVPPSLLPSSVRPSGACTFGDTVLCELGNPFKRNQRAELTITFEAIGIMLDTREVVVWLDLSTQSTQEDLQPVLAKLLVDYSIQSSLSIASSHIQSYFSGIVVGESAMKQEQDVGSPLTFDFQVTTKGESLGTLGTILLGFEWPYEIPNGKWLLYPTEILVNGNDTCHPPGGVINPLNLTLLQDQAPSRQRREXGAPELGEPPVTLATGRRPRSEAVLSCSAGTARCVWXECPLLHTQLPSSFSLRARVWNSTFIEEFRDFDRVKVTGTATLFLRSQVPTITMRNHTVRFSVDVDSELQEEQPAEIALWLVLVSVAAGLLLLGLIILLLWKCGFFRRANTRAMYEAKGQKAEMRIQPSETERLTDDY
SIO_010081: ITGA3
subclass of: SO_0000673
so part of: ITGA3
location: join(4271201..4271394,4276793..4276914,4276999..4277081,4277520..4277769,4277973..4278056,4278520..4278728,4279023..4279216,4279505..4279593,4279763..4279899,4279998..4280084,4280165..4280232,4280322..4280458,4280634..4280780,4280858..4280955,4281061..4281226,4281313..4281381,4281470..4281549,4281627..4281704,4281870..4281972,4282049..4282219,4282318..4282430,4282559..4282671,4282967..4283065,4283161..4283286,4283732..4283843)
location: region:4271201-4283843:1
so has part: feature:4271201-4271394:1:exon
so has part: feature:4276793-4276914:1:exon
so has part: feature:4276999-4277081:1:exon
so has part: feature:4277520-4277769:1:exon
so has part: feature:4277973-4278056:1:exon
so has part: feature:4278520-4278728:1:exon
so has part: feature:4279023-4279216:1:exon
so has part: feature:4279505-4279593:1:exon
so has part: feature:4279763-4279899:1:exon
so has part: feature:4279998-4280084:1:exon
so has part: feature:4280165-4280232:1:exon
so has part: feature:4280322-4280458:1:exon
so has part: feature:4280634-4280780:1:exon
so has part: feature:4280858-4280955:1:exon
so has part: feature:4281061-4281226:1:exon
so has part: feature:4281313-4281381:1:exon
so has part: feature:4281470-4281549:1:exon
so has part: feature:4281627-4281704:1:exon
so has part: feature:4281870-4281972:1:exon
so has part: feature:4282049-4282219:1:exon
so has part: feature:4282318-4282430:1:exon
so has part: feature:4282559-4282671:1:exon
so has part: feature:4282967-4283065:1:exon
so has part: feature:4283161-4283286:1:exon
so has part: feature:4283732-4283843:1:exon

XP_039420436.1
type: Protein
SIO_000068: ncbiprotein

position:4271201:1
position: 4271201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283843:1
position: 4283843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4271201-4271394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4276793-4276914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4276999-4277081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4277520-4277769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4277973-4278056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4278520-4278728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4279023-4279216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4279505-4279593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4279763-4279899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4279998-4280084:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4280165-4280232:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4280322-4280458:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4280634-4280780:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4280858-4280955:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4281061-4281226:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4281313-4281381:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4281470-4281549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4281627-4281704:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4281870-4281972:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4282049-4282219:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4282318-4282430:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4282559-4282671:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4282967-4283065:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4283161-4283286:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4283732-4283843:1:exon

PDK2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4285610..4291323
location: region:4285610-4291323:1
so has part: feature:4285610-4291323:1:exon
subclass of: SO_0000010

120411189
type: Gene
SIO_000068: ncbigene

position:4285610:1
position: 4285610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4291323:1
position: 4291323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4285610-4291323:1:exon

PDK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PDK2
product: pyruvate dehydrogenase kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564504.1
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(4285610..4285775,4286900..4287041,4287847..4287918,4288146..4288330,4288782..4288871,4289134..4289211,4289548..4289624,4289705..4289803,4289889..4289996,4290520..4290633,4290707..4291323)
location: region:4285610-4291323:1
so has part: feature:4285610-4285775:1:exon
so has part: feature:4286900-4287041:1:exon
so has part: feature:4287847-4287918:1:exon
so has part: feature:4288146-4288330:1:exon
so has part: feature:4288782-4288871:1:exon
so has part: feature:4289134-4289211:1:exon
so has part: feature:4289548-4289624:1:exon
so has part: feature:4289705-4289803:1:exon
so has part: feature:4289889-4289996:1:exon
so has part: feature:4290520-4290633:1:exon
so has part: feature:4290707-4291323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4285610-4285775:1:exon

position:4285775:1
position: 4285775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4286900-4287041:1:exon

position:4286900:1
position: 4286900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4287041:1
position: 4287041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4287847-4287918:1:exon

position:4287847:1
position: 4287847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4287918:1
position: 4287918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4288146-4288330:1:exon

position:4288146:1
position: 4288146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4288330:1
position: 4288330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4288782-4288871:1:exon

position:4288782:1
position: 4288782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4288871:1
position: 4288871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4289134-4289211:1:exon

position:4289134:1
position: 4289134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4289211:1
position: 4289211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4289548-4289624:1:exon

position:4289548:1
position: 4289548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4289624:1
position: 4289624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4289705-4289803:1:exon

position:4289705:1
position: 4289705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4289803:1
position: 4289803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4289889-4289996:1:exon

position:4289889:1
position: 4289889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4289996:1
position: 4289996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4290520-4290633:1:exon

position:4290520:1
position: 4290520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4290633:1
position: 4290633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4290707-4291323:1:exon

position:4290707:1
position: 4290707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 2
translation: MKQFLDFGSSNACEKTSFAFLRQELPVRLSNIMKEINLLPDRVLRTPSVQLVQSWYVQSLLDIMEFHDRDPEDQATLGQFTNALVTIRNRHNDVVPTMAQGVIEYKETYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLLFDGSTNPAHPKHIGSIDPHCNVANVVRDAYNMAKLLCDKYYMASPELEIEEVNASNSEQPVSIVYVPSHLYHMLFELFKNAMRATVESHENSPRLPAIKVMVALGQEDLSIRMSDRGMGVPLRKIERLFSYMYSTAPTPQLGSGGAPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQASQEGGDWCVPSTEPKNTSTYRVP
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(4285754..4285775,4286900..4287041,4287847..4287918,4288146..4288330,4288782..4288871,4289134..4289211,4289548..4289624,4289705..4289803,4289889..4289996,4290520..4290633,4290707..4290847)
location: region:4285754-4290847:1
so has part: feature:4285754-4285775:1:exon
so has part: feature:4286900-4287041:1:exon
so has part: feature:4287847-4287918:1:exon
so has part: feature:4288146-4288330:1:exon
so has part: feature:4288782-4288871:1:exon
so has part: feature:4289134-4289211:1:exon
so has part: feature:4289548-4289624:1:exon
so has part: feature:4289705-4289803:1:exon
so has part: feature:4289889-4289996:1:exon
so has part: feature:4290520-4290633:1:exon
so has part: feature:4290707-4290847:1:exon

XP_039420438.1
type: Protein
SIO_000068: ncbiprotein

position:4285754:1
position: 4285754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4290847:1
position: 4290847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4285754-4285775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4286900-4287041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4287847-4287918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4288146-4288330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4288782-4288871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4289134-4289211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4289548-4289624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4289705-4289803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4289889-4289996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4290520-4290633:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4290707-4290847:1:exon

SAMD14
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SAMD14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4291400..4296495)
location: region:4291400-4296495:-1
so has part: feature:4291400-4296495:-1:exon
subclass of: SO_0000010

120411195
type: Gene
SIO_000068: ncbigene

position:4291400:-1
position: 4291400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4296495:-1
position: 4296495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4291400-4296495:-1:exon

SAMD14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SAMD14
product: sterile alpha motif domain containing 14
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564576.1
SIO_010081: SAMD14
subclass of: SO_0000673
so part of: SAMD14
location: complement(join(4291400..4291417,4291876..4292016,4292414..4292569,4292645..4292852,4293044..4293193,4293272..4293346,4293555..4293642,4293714..4293971,4294160..4294317,4295352..4295403,4296398..4296495))
location: region:4291400-4296495:-1
so has part: feature:4296398-4296495:-1:exon
so has part: feature:4295352-4295403:-1:exon
so has part: feature:4294160-4294317:-1:exon
so has part: feature:4293714-4293971:-1:exon
so has part: feature:4293555-4293642:-1:exon
so has part: feature:4293272-4293346:-1:exon
so has part: feature:4293044-4293193:-1:exon
so has part: feature:4292645-4292852:-1:exon
so has part: feature:4292414-4292569:-1:exon
so has part: feature:4291876-4292016:-1:exon
so has part: feature:4291400-4291417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4296398-4296495:-1:exon

position:4296398:-1
position: 4296398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4295352-4295403:-1:exon

position:4295352:-1
position: 4295352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4295403:-1
position: 4295403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4294160-4294317:-1:exon

position:4294160:-1
position: 4294160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294317:-1
position: 4294317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4293714-4293971:-1:exon

position:4293714:-1
position: 4293714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293971:-1
position: 4293971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4293555-4293642:-1:exon

position:4293555:-1
position: 4293555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293642:-1
position: 4293642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4293272-4293346:-1:exon

position:4293272:-1
position: 4293272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293346:-1
position: 4293346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4293044-4293193:-1:exon

position:4293044:-1
position: 4293044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293193:-1
position: 4293193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4292645-4292852:-1:exon

position:4292645:-1
position: 4292645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292852:-1
position: 4292852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4292414-4292569:-1:exon

position:4292414:-1
position: 4292414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292569:-1
position: 4292569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4291876-4292016:-1:exon

position:4291876:-1
position: 4291876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292016:-1
position: 4292016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4291400-4291417:-1:exon

position:4291417:-1
position: 4291417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMD14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SAMD14
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sterile alpha motif domain-containing protein 14
translation: MSVSKLQDTDEVFDFTAVVPETPRLDSSLHKARARLLARGRRQRPSRSRLRDSASSTEGDEGPEAAGTEGEGSPPAPSPFSRTDGFSFEPGVARPGRGPPAPTPPLSRYRPLTNTPSQEGLSGPPAPQSCPSSDSSPGFAHRDPRPRQHSEDDSRDMSPPEPASPTVGLDKKTRRKFLDLGVTLRRASSVKSRKEKSSNRLSMGSREAAEGXGRPSGSPFLPFSWFSDSARGCGSXGSASPAGSPRHEGLSPAKSQGGSSFRGVWQPSCNGVLWGGSGGPLWVQPLPLPQDSTLSEDSPPSSASPHLPGSPXCSYPYHTLSQSSDELLEEPPGAAAGWTCGQVGQWLQSLGLERYVRDFSAHGVDGPRLLHLDGAKLKALGVGSSQDRAVLKRRLGGAERGDPAPPPHPQPPEHPRGHLGTRPPPVPPRD
SIO_010081: SAMD14
subclass of: SO_0000673
so part of: SAMD14
location: complement(join(4291400..4291417,4291876..4292016,4292414..4292569,4292645..4292852,4293044..4293193,4293272..4293346,4293555..4293642,4293714..4293971,4294160..4294317,4295352..4295391))
location: region:4291400-4295391:-1
so has part: feature:4295352-4295391:-1:exon
so has part: feature:4294160-4294317:-1:exon
so has part: feature:4293714-4293971:-1:exon
so has part: feature:4293555-4293642:-1:exon
so has part: feature:4293272-4293346:-1:exon
so has part: feature:4293044-4293193:-1:exon
so has part: feature:4292645-4292852:-1:exon
so has part: feature:4292414-4292569:-1:exon
so has part: feature:4291876-4292016:-1:exon
so has part: feature:4291400-4291417:-1:exon

XP_039420510.1
type: Protein
SIO_000068: ncbiprotein

position:4295391:-1
position: 4295391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4295352-4295391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4294160-4294317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4293714-4293971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4293555-4293642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4293272-4293346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4293044-4293193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4292645-4292852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4292414-4292569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4291876-4292016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4291400-4291417:-1:exon

PPP1R9B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PPP1R9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4297542..4306132)
location: region:4297542-4306132:-1
so has part: feature:4297542-4306132:-1:exon
subclass of: SO_0000010

120411188
type: Gene
SIO_000068: ncbigene

position:4297542:-1
position: 4297542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306132:-1
position: 4306132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4297542-4306132:-1:exon

PPP1R9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PPP1R9B
product: protein phosphatase 1 regulatory subunit 9B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564503.1
SIO_010081: PPP1R9B
subclass of: SO_0000673
so part of: PPP1R9B
location: complement(join(4297542..4298661,4299960..4300056,4300674..4300903,4301106..4301159,4301241..4301612,4301883..4301987,4302098..4302218,4302310..4302442,4304440..4306132))
location: region:4297542-4306132:-1
so has part: feature:4304440-4306132:-1:exon
so has part: feature:4302310-4302442:-1:exon
so has part: feature:4302098-4302218:-1:exon
so has part: feature:4301883-4301987:-1:exon
so has part: feature:4301241-4301612:-1:exon
so has part: feature:4301106-4301159:-1:exon
so has part: feature:4300674-4300903:-1:exon
so has part: feature:4299960-4300056:-1:exon
so has part: feature:4297542-4298661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4304440-4306132:-1:exon

position:4304440:-1
position: 4304440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4302310-4302442:-1:exon

position:4302310:-1
position: 4302310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4302442:-1
position: 4302442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4302098-4302218:-1:exon

position:4302098:-1
position: 4302098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4302218:-1
position: 4302218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4301883-4301987:-1:exon

position:4301883:-1
position: 4301883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301987:-1
position: 4301987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4301241-4301612:-1:exon

position:4301241:-1
position: 4301241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301612:-1
position: 4301612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4301106-4301159:-1:exon

position:4301106:-1
position: 4301106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301159:-1
position: 4301159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4300674-4300903:-1:exon

position:4300674:-1
position: 4300674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300903:-1
position: 4300903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4299960-4300056:-1:exon

position:4299960:-1
position: 4299960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300056:-1
position: 4300056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4297542-4298661:-1:exon

position:4298661:-1
position: 4298661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PPP1R9B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurabin-2
translation: MLRTEAGGAGGSPSAGGAAGAGGLRSASPHRNAYEATIQALAPTKEADGEDGKKSRGKKYGSNVHRIKNMFLQMGTAPGPEGACDLAKAKEKPVRLSLPRAGSLGDAVDQGSLLKLGTSVSERVSRFDSKPDKPFSKLQETRKIFERSPQEKATTTKLLLRKERAGFQDRKLDVVVRFNGSTESLDKLDADAVSPTVSQLSAVFEKADLRNNLHKAQGRAAVPLNAKVVAKRPRVFAPGTEAARPGDGHTTPARARPPDEEKAAGRAXRPAEKEAAAAPRVQEVCKIKPVEVEESGEGEEDEEEEEAAVAGEAVPAPQPAKGDEGPAAAAPRLDGGSGVAAGEEGVKGERAEEGDGSEEAKKEDFSEADLVDISAYSGLGEDSGGSGLEEEDEAEGLYEPESGCVEIPGLSEEEEPVPNRKIQFSTAPIQVFSTYSNEDYDRRNEDVDPMAASAEYELEKRVERLDLFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLIVEVDGTSLVGVTQSFAASVLRNTKGRVRFLIGREKPGEQSEVAQLIQQTLEQERWQREMMEQRYTQYTEDDEEVRGQRQPGGDTGLGQHPQXANPAPCPPQTGEYATDEEEEMSPMFPSGEMAIEVFELAENEDTLSPVEMDPEKLVHKFKELQIKHAVTEAEIQQLKRKLQCLEQEKARWRAEKAQLEQSVEENKERMEKLEGYWMEAQNLCQAVDEHLKETQAQYQTLERKYSKAKRLIKEYQQKEIEFLKKETAQRRVLEESELAHKEEMEKLQEKISELEAKLQTLKNSNPT
SIO_010081: PPP1R9B
subclass of: SO_0000673
so part of: PPP1R9B
location: complement(join(4298608..4298661,4299960..4300056,4300674..4300903,4301106..4301159,4301241..4301612,4301883..4301987,4302098..4302218,4302310..4302442,4304440..4305728))
location: region:4298608-4305728:-1
so has part: feature:4304440-4305728:-1:exon
so has part: feature:4302310-4302442:-1:exon
so has part: feature:4302098-4302218:-1:exon
so has part: feature:4301883-4301987:-1:exon
so has part: feature:4301241-4301612:-1:exon
so has part: feature:4301106-4301159:-1:exon
so has part: feature:4300674-4300903:-1:exon
so has part: feature:4299960-4300056:-1:exon
so has part: feature:4298608-4298661:-1:exon

XP_039420437.1
type: Protein
SIO_000068: ncbiprotein

position:4298608:-1
position: 4298608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305728:-1
position: 4305728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4304440-4305728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4302310-4302442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4302098-4302218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4301883-4301987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4301241-4301612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4301106-4301159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4300674-4300903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4299960-4300056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4298608-4298661:-1:exon

SGCA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SGCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4307320..4311217
location: region:4307320-4311217:1
so has part: feature:4307320-4311217:1:exon
subclass of: SO_0000010

120411223
type: Gene
SIO_000068: ncbigene

position:4307320:1
position: 4307320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4311217:1
position: 4311217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307320-4311217:1:exon

SGCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SGCA
product: sarcoglycan alpha
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_039564718.1
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(4307320..4307784,4308318..4308467,4308778..4308917,4308995..4309067,4309151..4309350,4309521..4309683,4309749..4309954,4310109..4310135,4310848..4311217)
location: region:4307320-4311217:1
so has part: feature:4307320-4307784:1:exon
so has part: feature:4308318-4308467:1:exon
so has part: feature:4308778-4308917:1:exon
so has part: feature:4308995-4309067:1:exon
so has part: feature:4309151-4309350:1:exon
so has part: feature:4309521-4309683:1:exon
so has part: feature:4309749-4309954:1:exon
so has part: feature:4310109-4310135:1:exon
so has part: feature:4310848-4311217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307320-4307784:1:exon

position:4307784:1
position: 4307784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4308318-4308467:1:exon

position:4308318:1
position: 4308318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308467:1
position: 4308467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4308778-4308917:1:exon

position:4308778:1
position: 4308778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308917:1
position: 4308917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4308995-4309067:1:exon

position:4308995:1
position: 4308995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309067:1
position: 4309067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4309151-4309350:1:exon

position:4309151:1
position: 4309151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309350:1
position: 4309350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4309521-4309683:1:exon

position:4309521:1
position: 4309521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309683:1
position: 4309683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4309749-4309954:1:exon

position:4309749:1
position: 4309749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309954:1
position: 4309954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4310109-4310135:1:exon

position:4310109:1
position: 4310109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310135:1
position: 4310135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4310848-4311217:1:exon

position:4310848:1
position: 4310848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SGCA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: alpha-sarcoglycan
translation: MEGPELLRLWVLAALALGGSQATVLDHHVLPDLRLSAETGAIFVHELERELFLETFPGSEDDDAPVTFRAHLWDHPDLPRWLRFAQRDPGQPGFLYGCPLAPELGTHSIQVLAYNRHTFATVSQRLLISVTPAPGGDALFQAEFLVGNRNVEELLPEAAREMFLQASAGVWERGDLHIINVTSALDRGGRVPLPIEGRREGVYVQVGSHSPFSPCLASAVSPQSRSRCHRGQRPLASCYDTFAPHFSIRWCNLTLLQVWPSPTTPGPLWGSGVLEDGGGFEPPTEVVPRELLPGFLVTLLVPLAVAALLCLLLGHLMCCRREGVEKRDLQTSDIQLVHHSSIHGDTRELRLMAGSRDVPRPLSTLPMFNVRTGQRINPMPGPRDGARVPLLPQ
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(4307745..4307784,4308318..4308467,4308778..4308917,4308995..4309067,4309151..4309350,4309521..4309683,4309749..4309954,4310109..4310135,4310848..4311031)
location: region:4307745-4311031:1
so has part: feature:4307745-4307784:1:exon
so has part: feature:4308318-4308467:1:exon
so has part: feature:4308778-4308917:1:exon
so has part: feature:4308995-4309067:1:exon
so has part: feature:4309151-4309350:1:exon
so has part: feature:4309521-4309683:1:exon
so has part: feature:4309749-4309954:1:exon
so has part: feature:4310109-4310135:1:exon
so has part: feature:4310848-4311031:1:exon

XP_039420652.1
type: Protein
SIO_000068: ncbiprotein

position:4307745:1
position: 4307745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4311031:1
position: 4311031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307745-4307784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4308318-4308467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4308778-4308917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4308995-4309067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4309151-4309350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4309521-4309683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4309749-4309954:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4310109-4310135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310848-4311031:1:exon

COL1A1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: COL1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4312401..4328167)
location: region:4312401-4328167:-1
so has part: feature:4312401-4328167:-1:exon
subclass of: SO_0000010

120411203
type: Gene
SIO_000068: ncbigene

position:4312401:-1
position: 4312401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328167:-1
position: 4328167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4312401-4328167:-1:exon

COL1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: COL1A1
product: collagen type I alpha 1 chain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 23 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039564632.1
SIO_010081: COL1A1
subclass of: SO_0000673
so part of: COL1A1
location: complement(join(4312401..4314049,4314127..4314369,4314447..4314637,4315159..4315441,4315528..4315635,4315803..4315856,4315972..4316079,4316206..4316259,4316534..4316641,4316728..4316781,4316930..4317036,4317132..4317238,4317354..4317514,4317691..4317744,4318063..4318116,4318208..4318315,4318416..4318469,4318583..4318636,4318737..4318844,4319188..4319295,4319453..4319551,4319651..4319695,4319949..4320002,4320110..4320163,4320267..4320320,4320778..4320831,4320949..4321046,4321127..4321180,4321346..4321444,4321632..4321685,4321931..4322037,4322129..4322182,4322439..4322537,4322618..4322662,4322750..4322848,4323105..4323158,4323307..4323351,4323459..4323512,4323762..4323806,4323904..4323957,4324062..4324115,4324225..4324278,4324403..4324456,4324668..4324721,4324951..4324995,4325591..4325659,4325741..4325833,4325917..4325952,4326052..4326086,4326231..4326425,4327956..4328167))
location: region:4312401-4328167:-1
so has part: feature:4327956-4328167:-1:exon
so has part: feature:4326231-4326425:-1:exon
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COL1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: COL1A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(I) chain
translation: MFSFVDSRSLLLIAATVLLTRGQGEEDIQTGSCIQDGLTYNDKDVWKPEPCQICVCDSGNILCDEVICEDTSDCPNAEIPFGECCPICPDTDASPAYPESAGVEGPKGDTGPKGDRGLPGPPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQMSYGYDEKAGGMAVPGPMGPAGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGEPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGARGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNTGEPGAPGNKGDTGAKGEPGPAGVQXPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGGDGIAGPKGPPGERGSPGPVGPKGSPGEAGRPGEPGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPXPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGETGAQGPPGPAGPAGERGEQGPAGAPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPGERGAAGLPGAKGDRGDPGPKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGETGDAGAKGDAGPPGPAGPTGAPGPAGAVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGGKGPRGETGPAGRPGEPGPAGPPXPPGEKGAPGADGPIGAPGXPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSPGERGPPGPXGPPGLAGPPGEAGREGSPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPQGPAGPPGPAGARGPAGPQGPRGDKGETGEQGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGDVGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTRKNPARTCRDLKMCHGDWKSGEYWIDPNQGCNLDAIKVFCNLETGETCVYPTQASIARKNWYLSKNPKEKKHVWFGETMSDGFQFEYGGEGSNPADVAIQLTFLRLMATEAAQNVTYHCKNSVAYMDQASGNLKKALLLQGANEIEIRAEGNSRFTYGVTEDGCTSHTGAWGKTVIEYKTTKTSRLPIIDLAPMDVGAPDQEFGIDIGPVCFL
SIO_010081: COL1A1
subclass of: SO_0000673
so part of: COL1A1
location: complement(join(4313903..4314049,4314127..4314369,4314447..4314637,4315159..4315441,4315528..4315635,4315803..4315856,4315972..4316079,4316206..4316259,4316534..4316641,4316728..4316781,4316930..4317036,4317132..4317238,4317354..4317514,4317691..4317744,4318063..4318116,4318208..4318315,4318416..4318469,4318583..4318636,4318737..4318844,4319188..4319295,4319453..4319551,4319651..4319695,4319949..4320002,4320110..4320163,4320267..4320320,4320778..4320831,4320949..4321046,4321127..4321180,4321346..4321444,4321632..4321685,4321931..4322037,4322129..4322182,4322439..4322537,4322618..4322662,4322750..4322848,4323105..4323158,4323307..4323351,4323459..4323512,4323762..4323806,4323904..4323957,4324062..4324115,4324225..4324278,4324403..4324456,4324668..4324721,4324951..4324995,4325591..4325659,4325741..4325833,4325917..4325952,4326052..4326086,4326231..4326425,4327956..4328037))
location: region:4313903-4328037:-1
so has part: feature:4327956-4328037:-1:exon
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so has part: feature:4323307-4323351:-1:exon
so has part: feature:4323105-4323158:-1:exon
so has part: feature:4322750-4322848:-1:exon
so has part: feature:4322618-4322662:-1:exon
so has part: feature:4322439-4322537:-1:exon
so has part: feature:4322129-4322182:-1:exon
so has part: feature:4321931-4322037:-1:exon
so has part: feature:4321632-4321685:-1:exon
so has part: feature:4321346-4321444:-1:exon
so has part: feature:4321127-4321180:-1:exon
so has part: feature:4320949-4321046:-1:exon
so has part: feature:4320778-4320831:-1:exon
so has part: feature:4320267-4320320:-1:exon
so has part: feature:4320110-4320163:-1:exon
so has part: feature:4319949-4320002:-1:exon
so has part: feature:4319651-4319695:-1:exon
so has part: feature:4319453-4319551:-1:exon
so has part: feature:4319188-4319295:-1:exon
so has part: feature:4318737-4318844:-1:exon
so has part: feature:4318583-4318636:-1:exon
so has part: feature:4318416-4318469:-1:exon
so has part: feature:4318208-4318315:-1:exon
so has part: feature:4318063-4318116:-1:exon
so has part: feature:4317691-4317744:-1:exon
so has part: feature:4317354-4317514:-1:exon
so has part: feature:4317132-4317238:-1:exon
so has part: feature:4316930-4317036:-1:exon
so has part: feature:4316728-4316781:-1:exon
so has part: feature:4316534-4316641:-1:exon
so has part: feature:4316206-4316259:-1:exon
so has part: feature:4315972-4316079:-1:exon
so has part: feature:4315803-4315856:-1:exon
so has part: feature:4315528-4315635:-1:exon
so has part: feature:4315159-4315441:-1:exon
so has part: feature:4314447-4314637:-1:exon
so has part: feature:4314127-4314369:-1:exon
so has part: feature:4313903-4314049:-1:exon

XP_039420566.1
type: Protein
SIO_000068: ncbiprotein

position:4313903:-1
position: 4313903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328037:-1
position: 4328037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4327956-4328037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4326231-4326425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4326052-4326086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4325917-4325952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4325741-4325833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4325591-4325659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4324951-4324995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4324668-4324721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4324403-4324456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4324225-4324278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4324062-4324115:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4323904-4323957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4323762-4323806:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4323459-4323512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4323307-4323351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4323105-4323158:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4322750-4322848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4322618-4322662:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4322439-4322537:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4322129-4322182:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4321931-4322037:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4321632-4321685:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4321346-4321444:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4321127-4321180:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4320949-4321046:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4320778-4320831:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4320267-4320320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4320110-4320163:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4319949-4320002:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4319651-4319695:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4319453-4319551:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4319188-4319295:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4318737-4318844:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4318583-4318636:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4318416-4318469:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4318208-4318315:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4318063-4318116:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4317691-4317744:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4317354-4317514:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4317132-4317238:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4316930-4317036:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4316728-4316781:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:4316534-4316641:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:4316206-4316259:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:4315972-4316079:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:4315803-4315856:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:4315528-4315635:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:4315159-4315441:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:4314447-4314637:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:4314127-4314369:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:4313903-4314049:-1:exon

LOC120411204
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4335802..4340858
location: region:4335802-4340858:1
so has part: feature:4335802-4340858:1:exon
subclass of: SO_0000010

120411204
type: Gene
SIO_000068: ncbigene

position:4335802:1
position: 4335802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4340858:1
position: 4340858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4335802-4340858:1:exon

LOC120411204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411204
product: basic salivary proline-rich protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039564633.1
SIO_010081: LOC120411204
subclass of: SO_0000673
so part of: LOC120411204
location: join(4335802..4336138,4340156..4340408,4340641..4340858)
location: region:4335802-4340858:1
so has part: feature:4335802-4336138:1:exon
so has part: feature:4340156-4340408:1:exon
so has part: feature:4340641-4340858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4335802-4336138:1:exon

position:4336138:1
position: 4336138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4340156-4340408:1:exon

position:4340156:1
position: 4340156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4340408:1
position: 4340408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4340641-4340858:1:exon

position:4340641:1
position: 4340641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120411204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic salivary proline-rich protein 1-like
translation: MAAVAPGARSRSRSQWPVGRRLSRSGAGWPRCRRCPAPAPRPGAKFLRLRRKPSALAAQRGRARPEGCRRDAGAGEGWRRESRAMFFIIVITFIAITFLLLIFHLFRKLCQDPVPPPAYRSPQGPMPASPSRDPQGPVPPPLTLMPTLPSLPSGAIPVGLEPPPYSEVTAKPFLYPLPQGPCPECGHMPTAQPPLTTRT
SIO_010081: LOC120411204
subclass of: SO_0000673
so part of: LOC120411204
location: join(4335891..4336138,4340156..4340408,4340641..4340739)
location: region:4335891-4340739:1
so has part: feature:4335891-4336138:1:exon
so has part: feature:4340156-4340408:1:exon
so has part: feature:4340641-4340739:1:exon

XP_039420567.1
type: Protein
SIO_000068: ncbiprotein

position:4335891:1
position: 4335891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4340739:1
position: 4340739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4335891-4336138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4340156-4340408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4340641-4340739:1:exon

LOC120411185
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4341192..4345314)
location: region:4341192-4345314:-1
so has part: feature:4341192-4345314:-1:exon
subclass of: SO_0000010

120411185
type: Gene
SIO_000068: ncbigene

position:4341192:-1
position: 4341192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4345314:-1
position: 4345314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4341192-4345314:-1:exon

LOC120411185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411185
product: all-trans-retinol 13,14-reductase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039564474.1
SIO_010081: LOC120411185
subclass of: SO_0000673
so part of: LOC120411185
location: complement(join(4341192..4341439,4341639..4341798,4341914..4342080,4342217..4342326,4342408..4342546,4343066..4343191,4343279..4343476,4343801..4343996,4344182..4344411,4344743..4344925,4345036..4345314))
location: region:4341192-4345314:-1
so has part: feature:4345036-4345314:-1:exon
so has part: feature:4344743-4344925:-1:exon
so has part: feature:4344182-4344411:-1:exon
so has part: feature:4343801-4343996:-1:exon
so has part: feature:4343279-4343476:-1:exon
so has part: feature:4343066-4343191:-1:exon
so has part: feature:4342408-4342546:-1:exon
so has part: feature:4342217-4342326:-1:exon
so has part: feature:4341914-4342080:-1:exon
so has part: feature:4341639-4341798:-1:exon
so has part: feature:4341192-4341439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4345036-4345314:-1:exon

position:4345036:-1
position: 4345036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4344743-4344925:-1:exon

position:4344743:-1
position: 4344743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4344925:-1
position: 4344925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4344182-4344411:-1:exon

position:4344182:-1
position: 4344182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4344411:-1
position: 4344411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4343801-4343996:-1:exon

position:4343801:-1
position: 4343801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343996:-1
position: 4343996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4343279-4343476:-1:exon

position:4343279:-1
position: 4343279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343476:-1
position: 4343476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4343066-4343191:-1:exon

position:4343066:-1
position: 4343066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343191:-1
position: 4343191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4342408-4342546:-1:exon

position:4342408:-1
position: 4342408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4342546:-1
position: 4342546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4342217-4342326:-1:exon

position:4342217:-1
position: 4342217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4342326:-1
position: 4342326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4341914-4342080:-1:exon

position:4341914:-1
position: 4341914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4342080:-1
position: 4342080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4341639-4341798:-1:exon

position:4341639:-1
position: 4341639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4341798:-1
position: 4341798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4341192-4341439:-1:exon

position:4341439:-1
position: 4341439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120411185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: all-trans-retinol 13,14-reductase-like
translation: MWPALLLLVALAVLALGRVAHRLLGPSGNPFAGPPLEPPRPLVTDQRTRDRVLKRGFSAQRVPDQLDAVVIGSGVGGLAVAATLAKAGRRVLVLEQHDQAGGCCHTFEQHGIEFDVGIHYVGQLHEGSLLRVLLDQLTDGQLCWHRLPDPYDEVTLGPQRYQLRSGKVAFVTALEEQFPAEKAAIREFMKLSKVASRHVALLAVLKLSPRWLVALLLRLGLLPRLSPVFRMATTSHSQAVAQLTSDPDLRALLGYLFYGTAPRDSSFLVNALMVHHYQRGAWYPRGGASEVAFHAVPVIERAGGAVLVRAPVTRVLVSAAGTAVGVAVRAGPAEEELEIRAPIVISDAGVFNTFGKLLPRHVRSHPGVRSLLDMVRPGMGSFLVFVGLRGSAAELGLPPTNFWIYPHNDLDAMMTQYAALSRDDVPENLAMMFITFPAAKDPTYEQRHPGKSCMTILTMARYEWFEEWAGSRPRHRGPEYQRYKMDIAQRLLERALLRFPHLRDKVEFVEAASPLTNQHYLGAARGEMYGTEHDLLRFSPAVVAALRPDTPVRNLYLTGQDVFSCGLAGAVHGGLLCASAILGRLLYLDLLLLKRKIKRRQGRHTA
SIO_010081: LOC120411185
subclass of: SO_0000673
so part of: LOC120411185
location: complement(join(4341294..4341439,4341639..4341798,4341914..4342080,4342217..4342326,4342408..4342546,4343066..4343191,4343279..4343476,4343801..4343996,4344182..4344411,4344743..4344925,4345036..4345201))
location: region:4341294-4345201:-1
so has part: feature:4345036-4345201:-1:exon
so has part: feature:4344743-4344925:-1:exon
so has part: feature:4344182-4344411:-1:exon
so has part: feature:4343801-4343996:-1:exon
so has part: feature:4343279-4343476:-1:exon
so has part: feature:4343066-4343191:-1:exon
so has part: feature:4342408-4342546:-1:exon
so has part: feature:4342217-4342326:-1:exon
so has part: feature:4341914-4342080:-1:exon
so has part: feature:4341639-4341798:-1:exon
so has part: feature:4341294-4341439:-1:exon

XP_039420408.1
type: Protein
SIO_000068: ncbiprotein

position:4341294:-1
position: 4341294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4345201:-1
position: 4345201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4345036-4345201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4344743-4344925:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4344182-4344411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4343801-4343996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4343279-4343476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4343066-4343191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4342408-4342546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4342217-4342326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4341914-4342080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4341639-4341798:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4341294-4341439:-1:exon

MPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4346171..4353725)
location: region:4346171-4353725:-1
so has part: feature:4346171-4353725:-1:exon
subclass of: SO_0000010

120411216
type: Gene
SIO_000068: ncbigene

position:4346171:-1
position: 4346171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4353725:-1
position: 4353725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4346171-4353725:-1:exon

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MPP2
product: membrane palmitoylated protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_039564703.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(4346171..4347179,4347319..4347447,4347527..4347729,4348085..4348246,4348351..4348419,4348623..4348728,4349131..4349262,4350131..4350358,4350729..4350877,4351044..4351202,4351789..4351907,4353623..4353725))
location: region:4346171-4353725:-1
so has part: feature:4353623-4353725:-1:exon
so has part: feature:4351789-4351907:-1:exon
so has part: feature:4351044-4351202:-1:exon
so has part: feature:4350729-4350877:-1:exon
so has part: feature:4350131-4350358:-1:exon
so has part: feature:4349131-4349262:-1:exon
so has part: feature:4348623-4348728:-1:exon
so has part: feature:4348351-4348419:-1:exon
so has part: feature:4348085-4348246:-1:exon
so has part: feature:4347527-4347729:-1:exon
so has part: feature:4347319-4347447:-1:exon
so has part: feature:4346171-4347179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4353623-4353725:-1:exon

position:4353623:-1
position: 4353623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4351789-4351907:-1:exon

position:4351789:-1
position: 4351789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4351907:-1
position: 4351907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4351044-4351202:-1:exon

position:4351044:-1
position: 4351044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4351202:-1
position: 4351202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4350729-4350877:-1:exon

position:4350729:-1
position: 4350729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4350877:-1
position: 4350877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4350131-4350358:-1:exon

position:4350131:-1
position: 4350131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4350358:-1
position: 4350358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4349131-4349262:-1:exon

position:4349131:-1
position: 4349131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349262:-1
position: 4349262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4348623-4348728:-1:exon

position:4348623:-1
position: 4348623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348728:-1
position: 4348728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4348351-4348419:-1:exon

position:4348351:-1
position: 4348351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348419:-1
position: 4348419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4348085-4348246:-1:exon

position:4348085:-1
position: 4348085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348246:-1
position: 4348246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4347527-4347729:-1:exon

position:4347527:-1
position: 4347527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4347729:-1
position: 4347729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4347319-4347447:-1:exon

position:4347319:-1
position: 4347319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4347447:-1
position: 4347447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4346171-4347179:-1:exon

position:4347179:-1
position: 4347179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MPP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MAGUK p55 subfamily member 2
translation: MPAAAPASVTAMQQVLDNLMGLPGTPGVADLDLIFLRGIMESPIVRSLAKAHERLEERKLEAVRGDNLALVQEILRDIGRLARPDVQGAAAELARILREPHFQSLLETHDSVAAKSYDXPPSSPGPEPSLGSQPVPPDAVRMVGIRKAAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFMAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDGEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEVARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKESERDGQGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTRIDSIRAVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPGPERLRAMNRAALESGVATKQLTEADAQRTVEESSRIQRGYGHYFDLSLTNDDLERTFGRLREAMDHLRVQPQWVPVTWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(4347003..4347179,4347319..4347447,4347527..4347729,4348085..4348246,4348351..4348419,4348623..4348728,4349131..4349262,4350131..4350358,4350729..4350877,4351044..4351202,4351789..4351907,4353623..4353653))
location: region:4347003-4353653:-1
so has part: feature:4353623-4353653:-1:exon
so has part: feature:4351789-4351907:-1:exon
so has part: feature:4351044-4351202:-1:exon
so has part: feature:4350729-4350877:-1:exon
so has part: feature:4350131-4350358:-1:exon
so has part: feature:4349131-4349262:-1:exon
so has part: feature:4348623-4348728:-1:exon
so has part: feature:4348351-4348419:-1:exon
so has part: feature:4348085-4348246:-1:exon
so has part: feature:4347527-4347729:-1:exon
so has part: feature:4347319-4347447:-1:exon
so has part: feature:4347003-4347179:-1:exon

XP_039420637.1
type: Protein
SIO_000068: ncbiprotein

position:4347003:-1
position: 4347003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4353653:-1
position: 4353653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4353623-4353653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4351789-4351907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4351044-4351202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4350729-4350877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4350131-4350358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4349131-4349262:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4348623-4348728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4348351-4348419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4348085-4348246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4347527-4347729:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4347319-4347447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4347003-4347179:-1:exon

LOC120411217
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4354056..4354934)
location: region:4354056-4354934:-1
so has part: feature:4354056-4354934:-1:exon
subclass of: SO_0000010

120411217
type: Gene
SIO_000068: ncbigene

position:4354056:-1
position: 4354056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354934:-1
position: 4354934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354056-4354934:-1:exon

LOC120411217
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411217
product: pancreatic hormone-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039564704.1
SIO_010081: LOC120411217
subclass of: SO_0000673
so part of: LOC120411217
location: complement(join(4354056..4354184,4354423..4354493,4354756..4354934))
location: region:4354056-4354934:-1
so has part: feature:4354756-4354934:-1:exon
so has part: feature:4354423-4354493:-1:exon
so has part: feature:4354056-4354184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4354756-4354934:-1:exon

position:4354756:-1
position: 4354756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4354423-4354493:-1:exon

position:4354423:-1
position: 4354423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354493:-1
position: 4354493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4354056-4354184:-1:exon

position:4354184:-1
position: 4354184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120411217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic hormone-like
translation: MAPRWPPLLLVACALVALLPLRPRAAPAQPAYPGDDAPVEDLLRFYNDLQQYLNVVTRPRYGKREGGRALGEEPLGAPGC
SIO_010081: LOC120411217
subclass of: SO_0000673
so part of: LOC120411217
location: complement(join(4354430..4354493,4354756..4354934))
location: region:4354430-4354934:-1
so has part: feature:4354756-4354934:-1:exon
so has part: feature:4354430-4354493:-1:exon

XP_039420638.1
type: Protein
SIO_000068: ncbiprotein

position:4354430:-1
position: 4354430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354756-4354934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4354430-4354493:-1:exon

LOC120411199
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4356530..4357905)
location: region:4356530-4357905:-1
so has part: feature:4356530-4357905:-1:exon
subclass of: SO_0000010

120411199
type: Gene
SIO_000068: ncbigene

position:4356530:-1
position: 4356530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357905:-1
position: 4357905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356530-4357905:-1:exon

LOC120411199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411199
product: peptide YY-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039564587.1
SIO_010081: LOC120411199
subclass of: SO_0000673
so part of: LOC120411199
location: complement(join(4356530..4356785,4356942..4357013,4357204..4357382,4357858..4357905))
location: region:4356530-4357905:-1
so has part: feature:4357858-4357905:-1:exon
so has part: feature:4357204-4357382:-1:exon
so has part: feature:4356942-4357013:-1:exon
so has part: feature:4356530-4356785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4357858-4357905:-1:exon

position:4357858:-1
position: 4357858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4357204-4357382:-1:exon

position:4357204:-1
position: 4357204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357382:-1
position: 4357382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4356942-4357013:-1:exon

position:4356942:-1
position: 4356942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357013:-1
position: 4357013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4356530-4356785:-1:exon

position:4356785:-1
position: 4356785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120411199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411199
product: peptide YY-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039564586.1
SIO_010081: LOC120411199
subclass of: SO_0000673
so part of: LOC120411199
location: complement(join(4356530..4356785,4356942..4357013,4357204..4357468))
location: region:4356530-4357468:-1
so has part: feature:4357204-4357468:-1:exon
so has part: feature:4356942-4357013:-1:exon
so has part: feature:4356530-4356785:-1:exon

position:4357468:-1
position: 4357468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4357204-4357468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4356942-4357013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356530-4356785:-1:exon

LOC120411199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide YY-like isoform X1
translation: MGAPGGDGGAPPAASAAPRPRSPQMATSPRPWRALVAVSLCALLCLAAAYPPKPESPGDDASPEEMARYFSALRHYINLVTRQRYGKRSSPGAAVTELLLGAGSDRSRYGDDDSSW
SIO_010081: LOC120411199
subclass of: SO_0000673
so part of: LOC120411199
location: complement(join(4356758..4356785,4356942..4357013,4357204..4357454))
location: region:4356758-4357454:-1
so has part: feature:4357204-4357454:-1:exon
so has part: feature:4356942-4357013:-1:exon
so has part: feature:4356758-4356785:-1:exon

XP_039420520.1
type: Protein
SIO_000068: ncbiprotein

position:4356758:-1
position: 4356758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357454:-1
position: 4357454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4357204-4357454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4356942-4357013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356758-4356785:-1:exon

LOC120411199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide YY-like isoform X2
translation: MATSPRPWRALVAVSLCALLCLAAAYPPKPESPGDDASPEEMARYFSALRHYINLVTRQRYGKRSSPGAAVTELLLGAGSDRSRYGDDDSSW
SIO_010081: LOC120411199
subclass of: SO_0000673
so part of: LOC120411199
location: complement(join(4356758..4356785,4356942..4357013,4357204..4357382))
location: region:4356758-4357382:-1
so has part: feature:4357204-4357382:-1:exon
so has part: feature:4356942-4357013:-1:exon
so has part: feature:4356758-4356785:-1:exon

XP_039420521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4357204-4357382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4356942-4357013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356758-4356785:-1:exon

TMEM101
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4360680..4363110)
location: region:4360680-4363110:-1
so has part: feature:4360680-4363110:-1:exon
subclass of: SO_0000010

120411197
type: Gene
SIO_000068: ncbigene

position:4360680:-1
position: 4360680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4363110:-1
position: 4363110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4360680-4363110:-1:exon

TMEM101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMEM101
product: transmembrane protein 101, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039564583.1
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360680..4361016,4361461..4361607,4361691..4361871,4363080..4363110))
location: region:4360680-4363110:-1
so has part: feature:4363080-4363110:-1:exon
so has part: feature:4361691-4361871:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360680-4361016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4363080-4363110:-1:exon

position:4363080:-1
position: 4363080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4361691-4361871:-1:exon

position:4361691:-1
position: 4361691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4361871:-1
position: 4361871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4361461-4361607:-1:exon

position:4361461:-1
position: 4361461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4361607:-1
position: 4361607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4360680-4361016:-1:exon

position:4361016:-1
position: 4361016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMEM101
product: transmembrane protein 101, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039564582.1
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360680..4361016,4361461..4361607,4361691..4361871,4362879..4362997))
location: region:4360680-4362997:-1
so has part: feature:4362879-4362997:-1:exon
so has part: feature:4361691-4361871:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360680-4361016:-1:exon

position:4362997:-1
position: 4362997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362879-4362997:-1:exon

position:4362879:-1
position: 4362879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4361691-4361871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4361461-4361607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4360680-4361016:-1:exon

TMEM101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMEM101
product: transmembrane protein 101, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564581.1
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360680..4361016,4361461..4361607,4361691..4361871,4362543..4362695))
location: region:4360680-4362695:-1
so has part: feature:4362543-4362695:-1:exon
so has part: feature:4361691-4361871:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360680-4361016:-1:exon

position:4362695:-1
position: 4362695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362543-4362695:-1:exon

position:4362543:-1
position: 4362543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4361691-4361871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4361461-4361607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4360680-4361016:-1:exon

TMEM101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 101 isoform X1
translation: MAAGRGWRRRALRLLTAGGGVLLTRFPFWHCFSGLLLCAERADLRRKPDIPVPYLYVDMGVAVLCASFMSFGVKRRWFALGAALQLAVATYAAHVGGHVHYGDWLKVRMYSRTIAIIGGFLILASGAGELYRQKPRSRSLQSTGQVFLGIYLICQAYSLQHSTEDRLAYLDHLLGGELALQLLFLLYGLLALAFLSGYYVRTAAQVLAVLLPLAILLIDGNLGYWHALRRVEFWNQMKLIGQNVGIFGAVVILATDG
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360708..4361016,4361461..4361607,4361691..4361871,4362543..4362679))
location: region:4360708-4362679:-1
so has part: feature:4362543-4362679:-1:exon
so has part: feature:4361691-4361871:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360708-4361016:-1:exon

XP_039420515.1
type: Protein
SIO_000068: ncbiprotein

position:4360708:-1
position: 4360708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4362679:-1
position: 4362679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362543-4362679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4361691-4361871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4361461-4361607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4360708-4361016:-1:exon

TMEM101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 101 isoform X2
translation: MGVAVLCASFMSFGVKRRWFALGAALQLAVATYAAHVGGHVHYGDWLKVRMYSRTIAIIGGFLILASGAGELYRQKPRSRSLQSTGQVFLGIYLICQAYSLQHSTEDRLAYLDHLLGGELALQLLFLLYGLLALAFLSGYYVRTAAQVLAVLLPLAILLIDGNLGYWHALRRVEFWNQMKLIGQNVGIFGAVVILATDG
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360708..4361016,4361461..4361607,4361691..4361834))
location: region:4360708-4361834:-1
so has part: feature:4361691-4361834:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360708-4361016:-1:exon

XP_039420516.1
type: Protein
SIO_000068: ncbiprotein

position:4361834:-1
position: 4361834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4361691-4361834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4361461-4361607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4360708-4361016:-1:exon

TMEM101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 101 isoform X2
translation: MGVAVLCASFMSFGVKRRWFALGAALQLAVATYAAHVGGHVHYGDWLKVRMYSRTIAIIGGFLILASGAGELYRQKPRSRSLQSTGQVFLGIYLICQAYSLQHSTEDRLAYLDHLLGGELALQLLFLLYGLLALAFLSGYYVRTAAQVLAVLLPLAILLIDGNLGYWHALRRVEFWNQMKLIGQNVGIFGAVVILATDG
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(4360708..4361016,4361461..4361607,4361691..4361834))
location: region:4360708-4361834:-1
so has part: feature:4361691-4361834:-1:exon
so has part: feature:4361461-4361607:-1:exon
so has part: feature:4360708-4361016:-1:exon

XP_039420517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4361691-4361834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4361461-4361607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4360708-4361016:-1:exon

LSM12
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LSM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4363389..4370142)
location: region:4363389-4370142:-1
so has part: feature:4363389-4370142:-1:exon
subclass of: SO_0000010

120411198
type: Gene
SIO_000068: ncbigene

position:4363389:-1
position: 4363389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370142:-1
position: 4370142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4363389-4370142:-1:exon

LSM12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LSM12
product: LSM12 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564585.1
SIO_010081: LSM12
subclass of: SO_0000673
so part of: LSM12
location: complement(join(4363389..4364217,4364550..4364676,4365013..4365122,4368000..4368133,4369962..4370142))
location: region:4363389-4370142:-1
so has part: feature:4369962-4370142:-1:exon
so has part: feature:4368000-4368133:-1:exon
so has part: feature:4365013-4365122:-1:exon
so has part: feature:4364550-4364676:-1:exon
so has part: feature:4363389-4364217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4369962-4370142:-1:exon

position:4369962:-1
position: 4369962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4368000-4368133:-1:exon

position:4368000:-1
position: 4368000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4368133:-1
position: 4368133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4365013-4365122:-1:exon

position:4365013:-1
position: 4365013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365122:-1
position: 4365122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4364550-4364676:-1:exon

position:4364550:-1
position: 4364550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4364676:-1
position: 4364676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4363389-4364217:-1:exon

position:4364217:-1
position: 4364217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LSM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM12 homolog
translation: MAAPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYPSKMLALKCPSSSGKPNHADILLVNLQYVSEVEIINDRTETPPPLASLNVSKLANKARTEKEEKMSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVIAPPYQVENCKGKEGSALSHVRKIVEKHFRDVESQKVLQRSQAQQTQKDTSLSS
SIO_010081: LSM12
subclass of: SO_0000673
so part of: LSM12
location: complement(join(4364125..4364217,4364550..4364676,4365013..4365122,4368000..4368133,4369962..4370082))
location: region:4364125-4370082:-1
so has part: feature:4369962-4370082:-1:exon
so has part: feature:4368000-4368133:-1:exon
so has part: feature:4365013-4365122:-1:exon
so has part: feature:4364550-4364676:-1:exon
so has part: feature:4364125-4364217:-1:exon

XP_039420519.1
type: Protein
SIO_000068: ncbiprotein

position:4364125:-1
position: 4364125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370082:-1
position: 4370082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369962-4370082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4368000-4368133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365013-4365122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4364550-4364676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4364125-4364217:-1:exon

G6PC3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4370252..4374143
location: region:4370252-4374143:1
so has part: feature:4370252-4374143:1:exon
subclass of: SO_0000010

120411196
type: Gene
SIO_000068: ncbigene

position:4370252:1
position: 4370252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4374143:1
position: 4374143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370252-4374143:1:exon

G6PC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: G6PC3
product: glucose-6-phosphatase catalytic subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_039564580.1
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(4370252..4370359,4370991..4371217,4371544..4371650,4371830..4371920,4372331..4372449,4372537..4372678,4372998..4374143)
location: region:4370252-4374143:1
so has part: feature:4370252-4370359:1:exon
so has part: feature:4370991-4371217:1:exon
so has part: feature:4371544-4371650:1:exon
so has part: feature:4371830-4371920:1:exon
so has part: feature:4372331-4372449:1:exon
so has part: feature:4372537-4372678:1:exon
so has part: feature:4372998-4374143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4370252-4370359:1:exon

position:4370359:1
position: 4370359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4370991-4371217:1:exon

position:4370991:1
position: 4370991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4371217:1
position: 4371217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4371544-4371650:1:exon

position:4371544:1
position: 4371544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4371650:1
position: 4371650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4371830-4371920:1:exon

position:4371830:1
position: 4371830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4371920:1
position: 4371920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4372331-4372449:1:exon

position:4372331:1
position: 4372331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4372449:1
position: 4372449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4372537-4372678:1:exon

position:4372537:1
position: 4372537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4372678:1
position: 4372678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4372998-4374143:1:exon

position:4372998:1
position: 4372998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

G6PC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase 3
translation: MKPPPQPSAMDALHEAGIRVAVALQAGPPWLEQFWLFLTSHLDPNSIYTVCFPLARGLDDHVSVMVLWIALVAEWLNVVLKWFLFGERPYWWIHESGLSSREQLPLRQFPASCETGPGSPSGHCMILGAALWPIVTALTNEVSRCTRRRVLRLIPFLVYILLLVAMGLSRIFVLAHFPHQVVTGSLAGMALGWGLQRWPPNFLKYRFFLAAALGLLLSALALHGLATAAGLDLDWSIRRAGARCSDPSWLRPETRPWASLCRVGGSALGLALAARHPLSRRAAEELRALEPPLGSAALGLLALDVLHKLPKSEDTALWYLNVGARYTLGPVLVCSLLPQLILTLRRLRGTP
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(4370342..4370359,4370991..4371217,4371544..4371650,4371830..4371920,4372331..4372449,4372537..4372678,4372998..4373349)
location: region:4370342-4373349:1
so has part: feature:4370342-4370359:1:exon
so has part: feature:4370991-4371217:1:exon
so has part: feature:4371544-4371650:1:exon
so has part: feature:4371830-4371920:1:exon
so has part: feature:4372331-4372449:1:exon
so has part: feature:4372537-4372678:1:exon
so has part: feature:4372998-4373349:1:exon

XP_039420514.1
type: Protein
SIO_000068: ncbiprotein

position:4370342:1
position: 4370342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4373349:1
position: 4373349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370342-4370359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4370991-4371217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4371544-4371650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371830-4371920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4372331-4372449:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4372537-4372678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4372998-4373349:1:exon

HDAC5
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HDAC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4375707..4396091)
location: region:4375707-4396091:-1
so has part: feature:4375707-4396091:-1:exon
subclass of: SO_0000010

120411208
type: Gene
SIO_000068: ncbigene

position:4375707:-1
position: 4375707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4396091:-1
position: 4396091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4375707-4396091:-1:exon

HDAC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HDAC5
product: histone deacetylase 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564642.1
SIO_010081: HDAC5
subclass of: SO_0000673
so part of: HDAC5
location: complement(join(4375707..4375834,4376381..4376535,4376707..4376791,4376971..4377104,4377182..4377300,4377688..4377785,4377877..4377996,4384352..4384439,4384516..4384571,4384708..4384815,4384884..4384933,4385315..4385435,4385513..4385646,4386108..4386258,4386554..4386827,4387189..4387375,4387519..4387750,4388081..4388206,4388365..4388471,4389147..4389281,4389376..4389498,4389585..4389699,4389843..4389975,4390398..4390600,4392091..4392165,4394577..4394689,4396055..4396091))
location: region:4375707-4396091:-1
so has part: feature:4396055-4396091:-1:exon
so has part: feature:4394577-4394689:-1:exon
so has part: feature:4392091-4392165:-1:exon
so has part: feature:4390398-4390600:-1:exon
so has part: feature:4389843-4389975:-1:exon
so has part: feature:4389585-4389699:-1:exon
so has part: feature:4389376-4389498:-1:exon
so has part: feature:4389147-4389281:-1:exon
so has part: feature:4388365-4388471:-1:exon
so has part: feature:4388081-4388206:-1:exon
so has part: feature:4387519-4387750:-1:exon
so has part: feature:4387189-4387375:-1:exon
so has part: feature:4386554-4386827:-1:exon
so has part: feature:4386108-4386258:-1:exon
so has part: feature:4385513-4385646:-1:exon
so has part: feature:4385315-4385435:-1:exon
so has part: feature:4384884-4384933:-1:exon
so has part: feature:4384708-4384815:-1:exon
so has part: feature:4384516-4384571:-1:exon
so has part: feature:4384352-4384439:-1:exon
so has part: feature:4377877-4377996:-1:exon
so has part: feature:4377688-4377785:-1:exon
so has part: feature:4377182-4377300:-1:exon
so has part: feature:4376971-4377104:-1:exon
so has part: feature:4376707-4376791:-1:exon
so has part: feature:4376381-4376535:-1:exon
so has part: feature:4375707-4375834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4396055-4396091:-1:exon

position:4396055:-1
position: 4396055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4394577-4394689:-1:exon

position:4394577:-1
position: 4394577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394689:-1
position: 4394689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4392091-4392165:-1:exon

position:4392091:-1
position: 4392091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4392165:-1
position: 4392165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4390398-4390600:-1:exon

position:4390398:-1
position: 4390398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4390600:-1
position: 4390600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4389843-4389975:-1:exon

position:4389843:-1
position: 4389843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389975:-1
position: 4389975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4389585-4389699:-1:exon

position:4389585:-1
position: 4389585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389699:-1
position: 4389699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4389376-4389498:-1:exon

position:4389376:-1
position: 4389376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389498:-1
position: 4389498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4389147-4389281:-1:exon

position:4389147:-1
position: 4389147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389281:-1
position: 4389281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4388365-4388471:-1:exon

position:4388365:-1
position: 4388365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4388471:-1
position: 4388471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4388081-4388206:-1:exon

position:4388081:-1
position: 4388081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4388206:-1
position: 4388206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4387519-4387750:-1:exon

position:4387519:-1
position: 4387519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387750:-1
position: 4387750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4387189-4387375:-1:exon

position:4387189:-1
position: 4387189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387375:-1
position: 4387375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4386554-4386827:-1:exon

position:4386554:-1
position: 4386554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4386827:-1
position: 4386827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4386108-4386258:-1:exon

position:4386108:-1
position: 4386108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4386258:-1
position: 4386258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4385513-4385646:-1:exon

position:4385513:-1
position: 4385513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385646:-1
position: 4385646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4385315-4385435:-1:exon

position:4385315:-1
position: 4385315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385435:-1
position: 4385435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4384884-4384933:-1:exon

position:4384884:-1
position: 4384884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384933:-1
position: 4384933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4384708-4384815:-1:exon

position:4384708:-1
position: 4384708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384815:-1
position: 4384815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4384516-4384571:-1:exon

position:4384516:-1
position: 4384516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384571:-1
position: 4384571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4384352-4384439:-1:exon

position:4384352:-1
position: 4384352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384439:-1
position: 4384439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4377877-4377996:-1:exon

position:4377877:-1
position: 4377877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377996:-1
position: 4377996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4377688-4377785:-1:exon

position:4377688:-1
position: 4377688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377785:-1
position: 4377785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4377182-4377300:-1:exon

position:4377182:-1
position: 4377182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377300:-1
position: 4377300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4376971-4377104:-1:exon

position:4376971:-1
position: 4376971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377104:-1
position: 4377104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4376707-4376791:-1:exon

position:4376707:-1
position: 4376707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376791:-1
position: 4376791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4376381-4376535:-1:exon

position:4376381:-1
position: 4376381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376535:-1
position: 4376535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4375707-4375834:-1:exon

position:4375834:-1
position: 4375834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HDAC5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone deacetylase 5
translation: MDPQSDTEGGSGREPPLELLPRVPLHASLPAPGPEGPEGPGPEAGVDAGLAAARERQLQRELVALKQQQQLQKQLLFAEFQKQHEHLTRQHQVQLQKHLKQQQEALAARRQQELEQQRQRERQELEQQRLEQLQSLRPKDRGRDSAIASTEVKLKLQEFLLSKTKEPGPGPPNHSLPQHPKCWAHHTSLDQSSPPRLAARGPPIYKLPLLGTYDGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRRDGSVLSAFRKRHVEITVSSVCSSAPGSGPSSPNSSHGAHNGLAASVPNIHSELLPQPRALALDGAQLSLYTSPSLPNLSLGLQATVTVTSAHLPASPKLSPQAEGERPGVPPGVSPLRPGAALTGKFLSTSSIPGCLLGVALDGDAPAGPPSLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERGGVPVXNKLPRHRPLSRTQSSPLPQSPQALPHGPLQHHFLDKQQVQLGKLLPKGGELARQPPTHPEETEEELTEQQSPPPVRGAPRAPLGPPLALVSPEPGDPPEQPQDPEGCQEPGDSGDEAEATGDPDVTELGVTYKQVYPEAPLQLFPAPPLGVLALPHPALARTQSSPASVKPPPPEGPPKHLFTTGVVYDTFMLKHQCTCGNTTIHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHALLYGTSPLNRQKLDSKKLLGPITPKTYTVLPCGGIGVDSDTVWNELHSSSAVRTAVGCLLELAFKVAAGEVKNGFAVIRPPGHHAEESTAMGFCFFNSVAISAKLLQQRLSVGRILIVDWDIHHGNGTQQAFYSDPHVLYISLHRYDDGNFFPGSGAPEEVGSGLGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGHDLTAICDASEACVTALLGLELEPLDPALLQQKPNVNAVATLEKVIEIQSRHWGCVRRFAATVGRSLLEAQRGDTEEAETVTAMALLSVGA
SIO_010081: HDAC5
subclass of: SO_0000673
so part of: HDAC5
location: complement(join(4376408..4376535,4376707..4376791,4376971..4377104,4377182..4377300,4377688..4377785,4377877..4377996,4384352..4384439,4384516..4384571,4384708..4384815,4384884..4384933,4385315..4385435,4385513..4385646,4386108..4386258,4386554..4386827,4387189..4387375,4387519..4387750,4388081..4388206,4388365..4388471,4389147..4389281,4389376..4389498,4389585..4389699,4389843..4389975,4390398..4390600,4392091..4392165,4394577..4394598))
location: region:4376408-4394598:-1
so has part: feature:4394577-4394598:-1:exon
so has part: feature:4392091-4392165:-1:exon
so has part: feature:4390398-4390600:-1:exon
so has part: feature:4389843-4389975:-1:exon
so has part: feature:4389585-4389699:-1:exon
so has part: feature:4389376-4389498:-1:exon
so has part: feature:4389147-4389281:-1:exon
so has part: feature:4388365-4388471:-1:exon
so has part: feature:4388081-4388206:-1:exon
so has part: feature:4387519-4387750:-1:exon
so has part: feature:4387189-4387375:-1:exon
so has part: feature:4386554-4386827:-1:exon
so has part: feature:4386108-4386258:-1:exon
so has part: feature:4385513-4385646:-1:exon
so has part: feature:4385315-4385435:-1:exon
so has part: feature:4384884-4384933:-1:exon
so has part: feature:4384708-4384815:-1:exon
so has part: feature:4384516-4384571:-1:exon
so has part: feature:4384352-4384439:-1:exon
so has part: feature:4377877-4377996:-1:exon
so has part: feature:4377688-4377785:-1:exon
so has part: feature:4377182-4377300:-1:exon
so has part: feature:4376971-4377104:-1:exon
so has part: feature:4376707-4376791:-1:exon
so has part: feature:4376408-4376535:-1:exon

XP_039420576.1
type: Protein
SIO_000068: ncbiprotein

position:4376408:-1
position: 4376408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394598:-1
position: 4394598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394577-4394598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4392091-4392165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4390398-4390600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4389843-4389975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4389585-4389699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4389376-4389498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4389147-4389281:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4388365-4388471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4388081-4388206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4387519-4387750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4387189-4387375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4386554-4386827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4386108-4386258:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4385513-4385646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4385315-4385435:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4384884-4384933:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4384708-4384815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4384516-4384571:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4384352-4384439:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4377877-4377996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4377688-4377785:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4377182-4377300:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4376971-4377104:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4376707-4376791:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4376408-4376535:-1:exon

HROB
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HROB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4396343..4400720
location: region:4396343-4400720:1
so has part: feature:4396343-4400720:1:exon
subclass of: SO_0000010

120411218
type: Gene
SIO_000068: ncbigene

position:4396343:1
position: 4396343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400720:1
position: 4400720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4396343-4400720:1:exon

HROB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HROB
product: homologous recombination factor with OB-fold, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039564705.1
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(4396343..4396424,4397237..4397287,4397411..4398178,4398605..4398688,4398822..4398962,4399203..4399311,4399389..4399474,4399866..4399970,4400105..4400297,4400432..4400720)
location: region:4396343-4400720:1
so has part: feature:4396343-4396424:1:exon
so has part: feature:4397237-4397287:1:exon
so has part: feature:4397411-4398178:1:exon
so has part: feature:4398605-4398688:1:exon
so has part: feature:4398822-4398962:1:exon
so has part: feature:4399203-4399311:1:exon
so has part: feature:4399389-4399474:1:exon
so has part: feature:4399866-4399970:1:exon
so has part: feature:4400105-4400297:1:exon
so has part: feature:4400432-4400720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4396343-4396424:1:exon

position:4396424:1
position: 4396424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4397237-4397287:1:exon

position:4397237:1
position: 4397237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4397287:1
position: 4397287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4397411-4398178:1:exon

position:4397411:1
position: 4397411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4398178:1
position: 4398178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4398605-4398688:1:exon

position:4398605:1
position: 4398605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4398688:1
position: 4398688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4398822-4398962:1:exon

position:4398822:1
position: 4398822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4398962:1
position: 4398962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4399203-4399311:1:exon

position:4399203:1
position: 4399203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399311:1
position: 4399311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4399389-4399474:1:exon

position:4399389:1
position: 4399389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399474:1
position: 4399474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4399866-4399970:1:exon

position:4399866:1
position: 4399866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399970:1
position: 4399970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4400105-4400297:1:exon

position:4400105:1
position: 4400105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400297:1
position: 4400297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4400432-4400720:1:exon

position:4400432:1
position: 4400432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HROB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HROB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous recombination OB-fold protein isoform X1
translation: MARTPGAWCATALAQECVSTQSCHFQKLFGTDGELEDEDFLSAVEDAENQFVIPGHSSPSVVPVHPSKAPTLRPLAGQGGFQGPPSRGAAPQDELDNDLFLAACRELEGPEAPVGAGAVPLPPRHREKPPWKCPGKENTQECGIPKKLRVGEELVPGSGGVQDRQGPLPSPKLVLRPSAAGACTPRPPPSVGKPGGSGGCIPAPGAPSLRPVRASLGGSSSSVPRTPPAQSCPQPWLPPGPPSGPPGPPNPPVVTNHLVQLVTAASKAPGGPPRAPPRRESRRFPGPAGILPQQHSGKLLEEILVSAPQTPAHGAVAKPRAQALPSSPLPTEEDFGKGPWLAMKTELGLDERDPSCFLHTYSVVMVLRKAALKQLPKNKVPSMAVMIKTLTRSSAGAGAVFRDPTGEMQGTVHRLLLEQRQSELRAGSVLLLRQVGVFSPSHRNHYLNVTPNNLLRIFPPEPEGCSPRQVPAQAELIPDPPAQPPQGVLAPEDWGHSRTSGHSAEQHPGGFSLHPPSSGPSWEELVGADGCDMDDLDGLLGELPEDFFSASAQADCG
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(4396362..4396424,4397237..4397287,4397411..4398178,4398605..4398688,4398822..4398962,4399203..4399311,4399389..4399474,4399866..4399970,4400105..4400297,4400432..4400505)
location: region:4396362-4400505:1
so has part: feature:4396362-4396424:1:exon
so has part: feature:4397237-4397287:1:exon
so has part: feature:4397411-4398178:1:exon
so has part: feature:4398605-4398688:1:exon
so has part: feature:4398822-4398962:1:exon
so has part: feature:4399203-4399311:1:exon
so has part: feature:4399389-4399474:1:exon
so has part: feature:4399866-4399970:1:exon
so has part: feature:4400105-4400297:1:exon
so has part: feature:4400432-4400505:1:exon

XP_039420639.1
type: Protein
SIO_000068: ncbiprotein

position:4396362:1
position: 4396362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400505:1
position: 4400505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4396362-4396424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4397237-4397287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4397411-4398178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4398605-4398688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4398822-4398962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4399203-4399311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4399389-4399474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4399866-4399970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4400105-4400297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4400432-4400505:1:exon

HROB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HROB
product: homologous recombination factor with OB-fold, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039564706.1
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(4396852..4396998,4397237..4397287,4397411..4398178,4398605..4398688,4398822..4398962,4399203..4399311,4399389..4399474,4399866..4399970,4400105..4400297,4400432..4400720)
location: region:4396852-4400720:1
so has part: feature:4396852-4396998:1:exon
so has part: feature:4397237-4397287:1:exon
so has part: feature:4397411-4398178:1:exon
so has part: feature:4398605-4398688:1:exon
so has part: feature:4398822-4398962:1:exon
so has part: feature:4399203-4399311:1:exon
so has part: feature:4399389-4399474:1:exon
so has part: feature:4399866-4399970:1:exon
so has part: feature:4400105-4400297:1:exon
so has part: feature:4400432-4400720:1:exon

position:4396852:1
position: 4396852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4396852-4396998:1:exon

position:4396998:1
position: 4396998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4397237-4397287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4397411-4398178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4398605-4398688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4398822-4398962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4399203-4399311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4399389-4399474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4399866-4399970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4400105-4400297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4400432-4400720:1:exon

HROB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HROB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous recombination OB-fold protein isoform X2
translation: MSCHFQKLFGTDGELEDEDFLSAVEDAENQFVIPGHSSPSVVPVHPSKAPTLRPLAGQGGFQGPPSRGAAPQDELDNDLFLAACRELEGPEAPVGAGAVPLPPRHREKPPWKCPGKENTQECGIPKKLRVGEELVPGSGGVQDRQGPLPSPKLVLRPSAAGACTPRPPPSVGKPGGSGGCIPAPGAPSLRPVRASLGGSSSSVPRTPPAQSCPQPWLPPGPPSGPPGPPNPPVVTNHLVQLVTAASKAPGGPPRAPPRRESRRFPGPAGILPQQHSGKLLEEILVSAPQTPAHGAVAKPRAQALPSSPLPTEEDFGKGPWLAMKTELGLDERDPSCFLHTYSVVMVLRKAALKQLPKNKVPSMAVMIKTLTRSSAGAGAVFRDPTGEMQGTVHRLLLEQRQSELRAGSVLLLRQVGVFSPSHRNHYLNVTPNNLLRIFPPEPEGCSPRQVPAQAELIPDPPAQPPQGVLAPEDWGHSRTSGHSAEQHPGGFSLHPPSSGPSWEELVGADGCDMDDLDGLLGELPEDFFSASAQADCG
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(4396996..4396998,4397237..4397287,4397411..4398178,4398605..4398688,4398822..4398962,4399203..4399311,4399389..4399474,4399866..4399970,4400105..4400297,4400432..4400505)
location: region:4396996-4400505:1
so has part: feature:4396996-4396998:1:exon
so has part: feature:4397237-4397287:1:exon
so has part: feature:4397411-4398178:1:exon
so has part: feature:4398605-4398688:1:exon
so has part: feature:4398822-4398962:1:exon
so has part: feature:4399203-4399311:1:exon
so has part: feature:4399389-4399474:1:exon
so has part: feature:4399866-4399970:1:exon
so has part: feature:4400105-4400297:1:exon
so has part: feature:4400432-4400505:1:exon

XP_039420640.1
type: Protein
SIO_000068: ncbiprotein

position:4396996:1
position: 4396996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4396996-4396998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4397237-4397287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4397411-4398178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4398605-4398688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4398822-4398962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4399203-4399311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4399389-4399474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4399866-4399970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4400105-4400297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4400432-4400505:1:exon

ASB16
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ASB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4400827..4403336
location: region:4400827-4403336:1
so has part: feature:4400827-4403336:1:exon
subclass of: SO_0000010

120411219
type: Gene
SIO_000068: ncbigene

position:4400827:1
position: 4400827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4403336:1
position: 4403336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4400827-4403336:1:exon

ASB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ASB16
product: ankyrin repeat and SOCS box containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039564707.1
SIO_010081: ASB16
subclass of: SO_0000673
so part of: ASB16
location: join(4400827..4401365,4401696..4401963,4402256..4402748,4402827..4402940,4403032..4403336)
location: region:4400827-4403336:1
so has part: feature:4400827-4401365:1:exon
so has part: feature:4401696-4401963:1:exon
so has part: feature:4402256-4402748:1:exon
so has part: feature:4402827-4402940:1:exon
so has part: feature:4403032-4403336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4400827-4401365:1:exon

position:4401365:1
position: 4401365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4401696-4401963:1:exon

position:4401696:1
position: 4401696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4401963:1
position: 4401963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4402256-4402748:1:exon

position:4402256:1
position: 4402256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4402748:1
position: 4402748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4402827-4402940:1:exon

position:4402827:1
position: 4402827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4402940:1
position: 4402940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4403032-4403336:1:exon

position:4403032:1
position: 4403032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ASB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 16
translation: MAHETFAFSSSALRSLRLQRELLEREDRRRALARESASRRFLPGTPRAPPSPPRRRQFCRDPAVHNALYAGDLPRVQSIFRDEATANLVLEMVSEELVWSPEQGLWVLSPRRQHTSALRIAAARGYEDCARHLLLRGAAVDAVVGDRAPLHDSVAAPHPNCARLLLAFGANPNVLSADGSAPLHLCTAPHSLRCAELLLAHGAQVNLGTRDRQVTALHVAARQGLVAHVELYLHHGADPSRRTHQGETPLNAAAAAAERPEDAERFLRVAERLLAAGADPRAAGRKGHTPLHNACANGHPALARLLLRHGADATVPNGAGDTPMDCALRAVHEYREQRPEETIALLLEHGALPAHPKMLRLCCQHPPALEVMLNAYDRVPPADGWVEAVPPELWEEHQEFYASAVRMAGQPRRLQHLARVAIRHHLGARCHTAVPRLALPPPLRCYLQLPIEGLIS
SIO_010081: ASB16
subclass of: SO_0000673
so part of: ASB16
location: join(4401056..4401365,4401696..4401963,4402256..4402748,4402827..4402940,4403032..4403217)
location: region:4401056-4403217:1
so has part: feature:4401056-4401365:1:exon
so has part: feature:4401696-4401963:1:exon
so has part: feature:4402256-4402748:1:exon
so has part: feature:4402827-4402940:1:exon
so has part: feature:4403032-4403217:1:exon

XP_039420641.1
type: Protein
SIO_000068: ncbiprotein

position:4401056:1
position: 4401056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4403217:1
position: 4403217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4401056-4401365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4401696-4401963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4402256-4402748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4402827-4402940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4403032-4403217:1:exon

TMUB2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TMUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4403735..4405792
location: region:4403735-4405792:1
so has part: feature:4403735-4405792:1:exon
subclass of: SO_0000010

120411206
type: Gene
SIO_000068: ncbigene

position:4403735:1
position: 4403735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4405792:1
position: 4405792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4403735-4405792:1:exon

TMUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMUB2
product: transmembrane and ubiquitin like domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_039564635.1
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(4403735..4403790,4404059..4404858,4405171..4405792)
location: region:4403735-4405792:1
so has part: feature:4403735-4403790:1:exon
so has part: feature:4404059-4404858:1:exon
so has part: feature:4405171-4405792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4403735-4403790:1:exon

position:4403790:1
position: 4403790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4404059-4404858:1:exon

position:4404059:1
position: 4404059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404858:1
position: 4404858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4405171-4405792:1:exon

position:4405171:1
position: 4405171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and ubiquitin-like domain-containing protein 2
translation: MEPPAAPLILGVGDEVTLVAGVAVLVLALVLAWLSTYVADGSGQLLGTGDAAVIRLGPLPPYAGPAGAAEAPEPPRAPENAEEKTEEEGGAAAQGDSGSPPDPGLEQLLDVRSLSQGAAEPRAPGAGDVCPGLIKIRLKFLNDTEEVAVARPEDTVGILKSKYFPGQESQMKLIYRGQLLQDQARTLRSLRITDNCVIHCHRSRGATVATPALPEPGPAGPAAPGLPLGGGSLMVPTVMVVLALGWYFRINYRQLFTAPATVSLIGVTVLVTFLAFGVYGQAG
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(4404377..4404858,4405171..4405540)
location: region:4404377-4405540:1
so has part: feature:4404377-4404858:1:exon
so has part: feature:4405171-4405540:1:exon

XP_039420569.1
type: Protein
SIO_000068: ncbiprotein

position:4404377:1
position: 4404377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4405540:1
position: 4405540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4404377-4404858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405171-4405540:1:exon

ATXN7L3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ATXN7L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4405943..4412821)
location: region:4405943-4412821:-1
so has part: feature:4405943-4412821:-1:exon
subclass of: SO_0000010

120411205
type: Gene
SIO_000068: ncbigene

position:4405943:-1
position: 4405943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412821:-1
position: 4412821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4405943-4412821:-1:exon

ATXN7L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ATXN7L3
product: ataxin 7 like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039564634.1
SIO_010081: ATXN7L3
subclass of: SO_0000673
so part of: ATXN7L3
location: complement(join(4405943..4407828,4408133..4408266,4408529..4408600,4408710..4408753,4409022..4409090,4409212..4409243,4409496..4409541,4409621..4409643,4409796..4409893,4410289..4410460,4410877..4411009,4411096..4411202,4412750..4412821))
location: region:4405943-4412821:-1
so has part: feature:4412750-4412821:-1:exon
so has part: feature:4411096-4411202:-1:exon
so has part: feature:4410877-4411009:-1:exon
so has part: feature:4410289-4410460:-1:exon
so has part: feature:4409796-4409893:-1:exon
so has part: feature:4409621-4409643:-1:exon
so has part: feature:4409496-4409541:-1:exon
so has part: feature:4409212-4409243:-1:exon
so has part: feature:4409022-4409090:-1:exon
so has part: feature:4408710-4408753:-1:exon
so has part: feature:4408529-4408600:-1:exon
so has part: feature:4408133-4408266:-1:exon
so has part: feature:4405943-4407828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4412750-4412821:-1:exon

position:4412750:-1
position: 4412750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4411096-4411202:-1:exon

position:4411096:-1
position: 4411096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4411202:-1
position: 4411202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4410877-4411009:-1:exon

position:4410877:-1
position: 4410877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4411009:-1
position: 4411009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4410289-4410460:-1:exon

position:4410289:-1
position: 4410289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410460:-1
position: 4410460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4409796-4409893:-1:exon

position:4409796:-1
position: 4409796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409893:-1
position: 4409893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4409621-4409643:-1:exon

position:4409621:-1
position: 4409621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409643:-1
position: 4409643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4409496-4409541:-1:exon

position:4409496:-1
position: 4409496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409541:-1
position: 4409541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4409212-4409243:-1:exon

position:4409212:-1
position: 4409212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409243:-1
position: 4409243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4409022-4409090:-1:exon

position:4409022:-1
position: 4409022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409090:-1
position: 4409090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4408710-4408753:-1:exon

position:4408710:-1
position: 4408710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408753:-1
position: 4408753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4408529-4408600:-1:exon

position:4408529:-1
position: 4408529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408600:-1
position: 4408600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4408133-4408266:-1:exon

position:4408133:-1
position: 4408133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408266:-1
position: 4408266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4405943-4407828:-1:exon

position:4407828:-1
position: 4407828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATXN7L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ATXN7L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-7-like protein 3
translation: MKMEDMSLSGLDNSKLEAIAHEIYTELVEDACLGLCFEVHRAVKCGYFFLDDTDPDSMKDFEIVDQPGVDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIASSNNLNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGEIGGNPDPFKYSNSAGINYETLGPEELRTLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRAVRVYLLGPSASLPEAEGGVENDSFEVAESQALMSRLQWDGSSDISPSDSASSKASTNNSESRKTKKKKPHLGLVSGAPGLGSSKKKKPKPPAPHTPSIYDDIN
SIO_010081: ATXN7L3
subclass of: SO_0000673
so part of: ATXN7L3
location: complement(join(4407680..4407828,4408133..4408266,4408529..4408600,4408710..4408753,4409022..4409090,4409212..4409243,4409496..4409541,4409621..4409643,4409796..4409893,4410289..4410460,4410877..4411009,4411096..4411146))
location: region:4407680-4411146:-1
so has part: feature:4411096-4411146:-1:exon
so has part: feature:4410877-4411009:-1:exon
so has part: feature:4410289-4410460:-1:exon
so has part: feature:4409796-4409893:-1:exon
so has part: feature:4409621-4409643:-1:exon
so has part: feature:4409496-4409541:-1:exon
so has part: feature:4409212-4409243:-1:exon
so has part: feature:4409022-4409090:-1:exon
so has part: feature:4408710-4408753:-1:exon
so has part: feature:4408529-4408600:-1:exon
so has part: feature:4408133-4408266:-1:exon
so has part: feature:4407680-4407828:-1:exon

XP_039420568.1
type: Protein
SIO_000068: ncbiprotein

position:4407680:-1
position: 4407680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4411146:-1
position: 4411146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411096-4411146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4410877-4411009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4410289-4410460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4409796-4409893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409621-4409643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4409496-4409541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4409212-4409243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4409022-4409090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4408710-4408753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4408529-4408600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4408133-4408266:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4407680-4407828:-1:exon

UBTF
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4415626..4433105)
location: region:4415626-4433105:-1
so has part: feature:4415626-4433105:-1:exon
subclass of: SO_0000010

120411192
type: Gene
SIO_000068: ncbigene

position:4415626:-1
position: 4415626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4433105:-1
position: 4433105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4415626-4433105:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039564524.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4433008..4433105))
location: region:4415626-4433105:-1
so has part: feature:4433008-4433105:-1:exon
so has part: feature:4429021-4429154:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4415626-4416647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4433008-4433105:-1:exon

position:4433008:-1
position: 4433008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4429021-4429154:-1:exon

position:4429021:-1
position: 4429021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4429154:-1
position: 4429154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4425883-4426058:-1:exon

position:4425883:-1
position: 4425883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4426058:-1
position: 4426058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4425519-4425602:-1:exon

position:4425519:-1
position: 4425519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4425602:-1
position: 4425602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4424735-4424890:-1:exon

position:4424735:-1
position: 4424735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424890:-1
position: 4424890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4423961-4424025:-1:exon

position:4423961:-1
position: 4423961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424025:-1
position: 4424025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4423236-4423365:-1:exon

position:4423236:-1
position: 4423236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4423365:-1
position: 4423365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4422698-4422808:-1:exon

position:4422698:-1
position: 4422698
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urn:…
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SIO_000628: feature:4422275-4422408:-1:exon

position:4422275:-1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:4418607-4418796:-1:exon

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urn:…
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:4415626-4416647:-1:exon

position:4416647:-1
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reference: sequence
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UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039564536.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4415626-4432502:-1
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position:4432502:-1
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reference: sequence
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SIO_000628: feature:4432415-4432502:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:4423961-4424025:-1:exon

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SIO_000628: feature:4423245-4423365:-1:exon

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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

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SIO_000628: feature:4421541-4421682:-1:exon

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SIO_000628: feature:4420332-4420445:-1:exon

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SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
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SIO_000628: feature:4419140-4419250:-1:exon

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SIO_000628: feature:4418964-4419052:-1:exon

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SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

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urn:…
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SIO_000628: feature:4415626-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_039564532.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4415626-4432502:-1
so has part: feature:4432415-4432502:-1:exon
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so has part: feature:4418607-4418796:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4432415-4432502:-1:exon

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SIO_000628: feature:4429021-4429154:-1:exon

urn:…
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SIO_000628: feature:4425883-4426058:-1:exon

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SIO_000628: feature:4425519-4425602:-1:exon

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SIO_000300: 5
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

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SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4415626-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039564530.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4415626-4432502:-1
so has part: feature:4432415-4432502:-1:exon
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so has part: feature:4418607-4418796:-1:exon
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so has part: feature:4417038-4417157:-1:exon
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urn:…
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SIO_000628: feature:4432415-4432502:-1:exon

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SIO_000628: feature:4429021-4429154:-1:exon

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SIO_000628: feature:4425883-4426058:-1:exon

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SIO_000628: feature:4424735-4424890:-1:exon

urn:…
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SIO_000628: feature:4423961-4424025:-1:exon

urn:…
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SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

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SIO_000628: feature:4421541-4421682:-1:exon

urn:…
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SIO_000628: feature:4421173-4421214:-1:exon

urn:…
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SIO_000628: feature:4420332-4420445:-1:exon

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SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
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SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4415626-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039564531.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4415626-4432502:-1
so has part: feature:4432415-4432502:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4432415-4432502:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4415626-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039564523.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4415626-4432502:-1
so has part: feature:4432415-4432502:-1:exon
so has part: feature:4429021-4429154:-1:exon
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urn:…
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urn:…
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SIO_000628: feature:4415626-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039564527.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4431964..4432121))
location: region:4415626-4432121:-1
so has part: feature:4431964-4432121:-1:exon
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so has part: feature:4417038-4417157:-1:exon
so has part: feature:4415626-4416647:-1:exon

position:4432121:-1
position: 4432121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431964-4432121:-1:exon

position:4431964:-1
position: 4431964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039564525.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432008..4432120))
location: region:4415626-4432120:-1
so has part: feature:4432008-4432120:-1:exon
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so has part: feature:4417484-4417630:-1:exon
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so has part: feature:4415626-4416647:-1:exon

position:4432120:-1
position: 4432120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4432008-4432120:-1:exon

position:4432008:-1
position: 4432008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039564528.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4431320..4431339))
location: region:4415626-4431339:-1
so has part: feature:4431320-4431339:-1:exon
so has part: feature:4429021-4429154:-1:exon
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so has part: feature:4415626-4416647:-1:exon

position:4431339:-1
position: 4431339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431320-4431339:-1:exon

position:4431320:-1
position: 4431320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_039564526.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4415626..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4431220..4431303))
location: region:4415626-4431303:-1
so has part: feature:4431220-4431303:-1:exon
so has part: feature:4429021-4429154:-1:exon
so has part: feature:4425883-4426058:-1:exon
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so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4415626-4416647:-1:exon

position:4431303:-1
position: 4431303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431220-4431303:-1:exon

position:4431220:-1
position: 4431220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 22
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UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039564533.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4416534-4432502:-1
so has part: feature:4432415-4432502:-1:exon
so has part: feature:4429021-4429154:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4416534-4416647:-1:exon

position:4416534:-1
position: 4416534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4432415-4432502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4429021-4429154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_039564529.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4416534-4432502:-1
so has part: feature:4432415-4432502:-1:exon
so has part: feature:4429021-4429154:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4432415-4432502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4429021-4429154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X8
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420470.1
type: Protein
SIO_000068: ncbiprotein

position:4429078:-1
position: 4429078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X5
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X6
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X2
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423245..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423245-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423245-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X3
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X4
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4416534..4416647,4417038..4417157,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4416534-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417038-4417157:-1:exon
so has part: feature:4416534-4416647:-1:exon

XP_039420462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417038-4417157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416534-4416647:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBTF
product: upstream binding transcription factor, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039564534.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4417122..4417191,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429154,4432415..4432502))
location: region:4417122-4432502:-1
so has part: feature:4432415-4432502:-1:exon
so has part: feature:4429021-4429154:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417122-4417191:-1:exon

position:4417122:-1
position: 4417122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4432415-4432502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4429021-4429154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4417122-4417191:-1:exon

position:4417191:-1
position: 4417191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X7
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDEILSLVSAPFAPV
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(4417153..4417191,4417484..4417630,4418000..4418068,4418304..4418351,4418607..4418796,4418964..4419052,4419140..4419250,4419470..4419625,4420042..4420197,4420332..4420445,4421173..4421214,4421541..4421682,4422275..4422408,4422698..4422808,4423236..4423365,4423961..4424025,4424735..4424890,4425519..4425602,4425883..4426058,4429021..4429078))
location: region:4417153-4429078:-1
so has part: feature:4429021-4429078:-1:exon
so has part: feature:4425883-4426058:-1:exon
so has part: feature:4425519-4425602:-1:exon
so has part: feature:4424735-4424890:-1:exon
so has part: feature:4423961-4424025:-1:exon
so has part: feature:4423236-4423365:-1:exon
so has part: feature:4422698-4422808:-1:exon
so has part: feature:4422275-4422408:-1:exon
so has part: feature:4421541-4421682:-1:exon
so has part: feature:4421173-4421214:-1:exon
so has part: feature:4420332-4420445:-1:exon
so has part: feature:4420042-4420197:-1:exon
so has part: feature:4419470-4419625:-1:exon
so has part: feature:4419140-4419250:-1:exon
so has part: feature:4418964-4419052:-1:exon
so has part: feature:4418607-4418796:-1:exon
so has part: feature:4418304-4418351:-1:exon
so has part: feature:4418000-4418068:-1:exon
so has part: feature:4417484-4417630:-1:exon
so has part: feature:4417153-4417191:-1:exon

XP_039420468.1
type: Protein
SIO_000068: ncbiprotein

position:4417153:-1
position: 4417153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4429021-4429078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425883-4426058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4425519-4425602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4424735-4424890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4423961-4424025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4423236-4423365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4422698-4422808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4422275-4422408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4421541-4421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4421173-4421214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4420332-4420445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4420042-4420197:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4419470-4419625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4419140-4419250:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4418964-4419052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4418607-4418796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4418304-4418351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4418000-4418068:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4417484-4417630:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4417153-4417191:-1:exon

SLC4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4437117..4449890)
location: region:4437117-4449890:-1
so has part: feature:4437117-4449890:-1:exon
subclass of: SO_0000010

104698650
type: Gene
SIO_000068: ncbigene

position:4437117:-1
position: 4437117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4449890:-1
position: 4449890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4437117-4449890:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039564522.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(4437117..4437483,4437854..4438027,4438252..4438421,4438507..4438760,4438871..4439037,4439132..4439221,4439383..4439550,4440004..4440198,4440645..4440793,4441000..4441206,4441314..4441524,4442011..4442195,4442737..4442806,4443234..4443375,4443577..4443712,4443792..4443969,4444152..4444225,4445307..4445404,4445522..4445591,4446477..4446573,4446683..4446774,4449798..4449890))
location: region:4437117-4449890:-1
so has part: feature:4449798-4449890:-1:exon
so has part: feature:4446683-4446774:-1:exon
so has part: feature:4446477-4446573:-1:exon
so has part: feature:4445522-4445591:-1:exon
so has part: feature:4445307-4445404:-1:exon
so has part: feature:4444152-4444225:-1:exon
so has part: feature:4443792-4443969:-1:exon
so has part: feature:4443577-4443712:-1:exon
so has part: feature:4443234-4443375:-1:exon
so has part: feature:4442737-4442806:-1:exon
so has part: feature:4442011-4442195:-1:exon
so has part: feature:4441314-4441524:-1:exon
so has part: feature:4441000-4441206:-1:exon
so has part: feature:4440645-4440793:-1:exon
so has part: feature:4440004-4440198:-1:exon
so has part: feature:4439383-4439550:-1:exon
so has part: feature:4439132-4439221:-1:exon
so has part: feature:4438871-4439037:-1:exon
so has part: feature:4438507-4438760:-1:exon
so has part: feature:4438252-4438421:-1:exon
so has part: feature:4437854-4438027:-1:exon
so has part: feature:4437117-4437483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4449798-4449890:-1:exon

position:4449798:-1
position: 4449798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4446683-4446774:-1:exon

position:4446683:-1
position: 4446683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4446774:-1
position: 4446774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4446477-4446573:-1:exon

position:4446477:-1
position: 4446477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4446573:-1
position: 4446573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4445522-4445591:-1:exon

position:4445522:-1
position: 4445522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4445591:-1
position: 4445591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4445307-4445404:-1:exon

position:4445307:-1
position: 4445307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4445404:-1
position: 4445404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4444152-4444225:-1:exon

position:4444152:-1
position: 4444152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444225:-1
position: 4444225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4443792-4443969:-1:exon

position:4443792:-1
position: 4443792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443969:-1
position: 4443969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4443577-4443712:-1:exon

position:4443577:-1
position: 4443577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443712:-1
position: 4443712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4443234-4443375:-1:exon

position:4443234:-1
position: 4443234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443375:-1
position: 4443375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4442737-4442806:-1:exon

position:4442737:-1
position: 4442737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4442806:-1
position: 4442806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4442011-4442195:-1:exon

position:4442011:-1
position: 4442011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4442195:-1
position: 4442195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4441314-4441524:-1:exon

position:4441314:-1
position: 4441314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4441524:-1
position: 4441524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4441000-4441206:-1:exon

position:4441000:-1
position: 4441000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4441206:-1
position: 4441206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4440645-4440793:-1:exon

position:4440645:-1
position: 4440645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4440793:-1
position: 4440793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4440004-4440198:-1:exon

position:4440004:-1
position: 4440004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4440198:-1
position: 4440198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4439383-4439550:-1:exon

position:4439383:-1
position: 4439383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439550:-1
position: 4439550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4439132-4439221:-1:exon

position:4439132:-1
position: 4439132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439221:-1
position: 4439221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4438871-4439037:-1:exon

position:4438871:-1
position: 4438871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439037:-1
position: 4439037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4438507-4438760:-1:exon

position:4438507:-1
position: 4438507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438760:-1
position: 4438760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4438252-4438421:-1:exon

position:4438252:-1
position: 4438252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438421:-1
position: 4438421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4437854-4438027:-1:exon

position:4437854:-1
position: 4437854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438027:-1
position: 4438027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4437117-4437483:-1:exon

position:4437483:-1
position: 4437483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein
translation: MEGPGQESYEEGMRRSLDPEGYEDPGLKSSHLSLGEMSRAGAGIGSPLQAWRARAEEMKPLRQFLPGRRGFYDLDGKRRSAGAPPGHPSRGEGQPVSVTDVDLEATGSRRLLSQQDTHEGYVELHELVLDNAKDLCWMEAGHWLKLEEDFQESGDWSQPHLSFLTYHSLLEIRRALNKGAILLNVEATSLPAIVHILLDQLIYEGQMKPQDRDDVMRTLLLRHSHPTEDESVWTMPPALVQRSGTTRADVERPLLREQRPVEMSRMAGREQSGVPKPQLLETIPEGAEATLVLVGCAAFLEQPMLAFVRLKNAVTLDGVLDVSLPVRFLIVVLGPDTPQISYHEIGRAIATMMSERVFRQDAYLAEARQDLVRGVEDFLDASIVLPPTETPNEQLLRALVPLQRELLRRRYQPFERLHIGDYLKDLGPDEAAAAEDDDPLRRTGWPFGGLVRDIRRRYPKYLSDIKDALNPQCLAAVIFIYFAALSPAITFGGLLGEKTKGMMGVSELLISTCVQCVLFSLLSAQPLLVVGFSGPLLVFEEAFYSFCSSNGLEYIVGRVWIGFWLILLVLVVVACEGSFLVRYLSRYTQEIFSFLISLIFIFETFSKLVTIFKDHPLSRQYNLQPDFQPGVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFIMALADFFIKDTYTQKLSVPKGLQVTNSSARGWFIHPLGKESPFPIWMMFASVIPALLVFILIFLETQITTLIVSKPERKLVKGTGFHLDLLLIVAMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAPGEKSQILEVKEQRISGLLVAVLIGVSILMEPILKFIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLKPPKYHPDEPYVTRVKTWRMHLFTFTQIIFLVVLWVVKSTPASLALPFVLILTVPLRRFLLPKIFRDIELKCLDADDAVVTFEEAEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(4437403..4437483,4437854..4438027,4438252..4438421,4438507..4438760,4438871..4439037,4439132..4439221,4439383..4439550,4440004..4440198,4440645..4440793,4441000..4441206,4441314..4441524,4442011..4442195,4442737..4442806,4443234..4443375,4443577..4443712,4443792..4443969,4444152..4444225,4445307..4445404,4445522..4445591,4446477..4446573,4446683..4446700))
location: region:4437403-4446700:-1
so has part: feature:4446683-4446700:-1:exon
so has part: feature:4446477-4446573:-1:exon
so has part: feature:4445522-4445591:-1:exon
so has part: feature:4445307-4445404:-1:exon
so has part: feature:4444152-4444225:-1:exon
so has part: feature:4443792-4443969:-1:exon
so has part: feature:4443577-4443712:-1:exon
so has part: feature:4443234-4443375:-1:exon
so has part: feature:4442737-4442806:-1:exon
so has part: feature:4442011-4442195:-1:exon
so has part: feature:4441314-4441524:-1:exon
so has part: feature:4441000-4441206:-1:exon
so has part: feature:4440645-4440793:-1:exon
so has part: feature:4440004-4440198:-1:exon
so has part: feature:4439383-4439550:-1:exon
so has part: feature:4439132-4439221:-1:exon
so has part: feature:4438871-4439037:-1:exon
so has part: feature:4438507-4438760:-1:exon
so has part: feature:4438252-4438421:-1:exon
so has part: feature:4437854-4438027:-1:exon
so has part: feature:4437403-4437483:-1:exon

XP_039420456.1
type: Protein
SIO_000068: ncbiprotein

position:4437403:-1
position: 4437403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4446700:-1
position: 4446700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4446683-4446700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4446477-4446573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4445522-4445591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4445307-4445404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4444152-4444225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4443792-4443969:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4443577-4443712:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4443234-4443375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4442737-4442806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4442011-4442195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4441314-4441524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4441000-4441206:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4440645-4440793:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4440004-4440198:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4439383-4439550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4439132-4439221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4438871-4439037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4438507-4438760:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4438252-4438421:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4437854-4438027:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4437403-4437483:-1:exon

RUNDC3A
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4451509..4456780
location: region:4451509-4456780:1
so has part: feature:4451509-4456780:1:exon
subclass of: SO_0000010

104698648
type: Gene
SIO_000068: ncbigene

position:4451509:1
position: 4451509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456780:1
position: 4456780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4451509-4456780:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039564537.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(4451509..4451671,4453202..4453317,4453479..4453612,4454029..4454114,4454248..4454337,4454430..4454510,4454624..4454789,4455010..4455167,4455481..4455618,4456072..4456780)
location: region:4451509-4456780:1
so has part: feature:4451509-4451671:1:exon
so has part: feature:4453202-4453317:1:exon
so has part: feature:4453479-4453612:1:exon
so has part: feature:4454029-4454114:1:exon
so has part: feature:4454248-4454337:1:exon
so has part: feature:4454430-4454510:1:exon
so has part: feature:4454624-4454789:1:exon
so has part: feature:4455010-4455167:1:exon
so has part: feature:4455481-4455618:1:exon
so has part: feature:4456072-4456780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4451509-4451671:1:exon

position:4451671:1
position: 4451671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4453202-4453317:1:exon

position:4453202:1
position: 4453202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4453317:1
position: 4453317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4453479-4453612:1:exon

position:4453479:1
position: 4453479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4453612:1
position: 4453612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4454029-4454114:1:exon

position:4454029:1
position: 4454029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454114:1
position: 4454114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4454248-4454337:1:exon

position:4454248:1
position: 4454248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454337:1
position: 4454337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4454430-4454510:1:exon

position:4454430:1
position: 4454430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454510:1
position: 4454510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4454624-4454789:1:exon

position:4454624:1
position: 4454624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454789:1
position: 4454789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4455010-4455167:1:exon

position:4455010:1
position: 4455010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4455167:1
position: 4455167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4455481-4455618:1:exon

position:4455481:1
position: 4455481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4455618:1
position: 4455618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4456072-4456780:1:exon

position:4456072:1
position: 4456072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_039564538.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(4451510..4451671,4453202..4453317,4453479..4453612,4454029..4454114,4454248..4454337,4454430..4454510,4454624..4454789,4455010..4455167,4455481..4455618,4455741..4455847,4456072..4456278)
location: region:4451510-4456278:1
so has part: feature:4451510-4451671:1:exon
so has part: feature:4453202-4453317:1:exon
so has part: feature:4453479-4453612:1:exon
so has part: feature:4454029-4454114:1:exon
so has part: feature:4454248-4454337:1:exon
so has part: feature:4454430-4454510:1:exon
so has part: feature:4454624-4454789:1:exon
so has part: feature:4455010-4455167:1:exon
so has part: feature:4455481-4455618:1:exon
so has part: feature:4455741-4455847:1:exon
so has part: feature:4456072-4456278:1:exon

position:4451510:1
position: 4451510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456278:1
position: 4456278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4451510-4451671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4453202-4453317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4453479-4453612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4454029-4454114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4454248-4454337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4454430-4454510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4454624-4454789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4455010-4455167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4455481-4455618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4455741-4455847:1:exon

position:4455741:1
position: 4455741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4455847:1
position: 4455847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4456072-4456278:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X1
translation: MEASWVPAAMALGLSSKKASSRNIAVERKNLITVCRFSVKTLLEKYTADPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFSFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESGSDSKLYRREGPHALHAGALRLPGLPAQLQVPGQSQVQRVPGERQHGSQPDPQPQLRAPAPAPPPGPAARPRTELGPPSPPRRQRGTRRTHRGGWGPASPSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(4451565..4451671,4453202..4453317,4453479..4453612,4454029..4454114,4454248..4454337,4454430..4454510,4454624..4454789,4455010..4455167,4455481..4455618,4456072..4456357)
location: region:4451565-4456357:1
so has part: feature:4451565-4451671:1:exon
so has part: feature:4453202-4453317:1:exon
so has part: feature:4453479-4453612:1:exon
so has part: feature:4454029-4454114:1:exon
so has part: feature:4454248-4454337:1:exon
so has part: feature:4454430-4454510:1:exon
so has part: feature:4454624-4454789:1:exon
so has part: feature:4455010-4455167:1:exon
so has part: feature:4455481-4455618:1:exon
so has part: feature:4456072-4456357:1:exon

XP_039420471.1
type: Protein
SIO_000068: ncbiprotein

position:4451565:1
position: 4451565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456357:1
position: 4456357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4451565-4451671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4453202-4453317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4453479-4453612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4454029-4454114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4454248-4454337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4454430-4454510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4454624-4454789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4455010-4455167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4455481-4455618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4456072-4456357:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X2
translation: MEASWVPAAMALGLSSKKASSRNIAVERKNLITVCRFSVKTLLEKYTADPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFSFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESGSDSKLYRRHSFVSTDQLSAENSLSSDSQRLGEGKREGEPWGPLGKDPTPSMLGLCGSLASLPSCKSLASLKSNECLVSDSTEASPTRSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(4451565..4451671,4453202..4453317,4453479..4453612,4454029..4454114,4454248..4454337,4454430..4454510,4454624..4454789,4455010..4455167,4455481..4455618,4455741..4455847,4456072..4456214)
location: region:4451565-4456214:1
so has part: feature:4451565-4451671:1:exon
so has part: feature:4453202-4453317:1:exon
so has part: feature:4453479-4453612:1:exon
so has part: feature:4454029-4454114:1:exon
so has part: feature:4454248-4454337:1:exon
so has part: feature:4454430-4454510:1:exon
so has part: feature:4454624-4454789:1:exon
so has part: feature:4455010-4455167:1:exon
so has part: feature:4455481-4455618:1:exon
so has part: feature:4455741-4455847:1:exon
so has part: feature:4456072-4456214:1:exon

XP_039420472.1
type: Protein
SIO_000068: ncbiprotein

position:4456214:1
position: 4456214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4451565-4451671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4453202-4453317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4453479-4453612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4454029-4454114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4454248-4454337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4454430-4454510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4454624-4454789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4455010-4455167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4455481-4455618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4455741-4455847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4456072-4456214:1:exon

SLC25A39
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4457136..4464799)
location: region:4457136-4464799:-1
so has part: feature:4457136-4464799:-1:exon
subclass of: SO_0000010

104698647
type: Gene
SIO_000068: ncbigene

position:4457136:-1
position: 4457136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4464799:-1
position: 4464799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4457136-4464799:-1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039564541.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457136..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461073,4464724..4464799))
location: region:4457136-4464799:-1
so has part: feature:4464724-4464799:-1:exon
so has part: feature:4460965-4461073:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457136-4457997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4464724-4464799:-1:exon

position:4464724:-1
position: 4464724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4460965-4461073:-1:exon

position:4460965:-1
position: 4460965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461073:-1
position: 4461073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4460831-4460890:-1:exon

position:4460831:-1
position: 4460831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4460890:-1
position: 4460890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4460198-4460242:-1:exon

position:4460198:-1
position: 4460198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4460242:-1
position: 4460242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4459434-4459543:-1:exon

position:4459434:-1
position: 4459434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459543:-1
position: 4459543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4459243-4459310:-1:exon

position:4459243:-1
position: 4459243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459310:-1
position: 4459310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4459001-4459125:-1:exon

position:4459001:-1
position: 4459001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459125:-1
position: 4459125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4458667-4458840:-1:exon

position:4458667:-1
position: 4458667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4458840:-1
position: 4458840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4458462-4458571:-1:exon

position:4458462:-1
position: 4458462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4458571:-1
position: 4458571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4458230-4458311:-1:exon

position:4458230:-1
position: 4458230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4458311:-1
position: 4458311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4458069-4458149:-1:exon

position:4458069:-1
position: 4458069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4458149:-1
position: 4458149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4457136-4457997:-1:exon

position:4457997:-1
position: 4457997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039564540.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457136..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460831..4460890,4460965..4461073,4464667..4464689))
location: region:4457136-4464689:-1
so has part: feature:4464667-4464689:-1:exon
so has part: feature:4460965-4461073:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457136-4457997:-1:exon

position:4464689:-1
position: 4464689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4464667-4464689:-1:exon

position:4464667:-1
position: 4464667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4460965-4461073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4457136-4457997:-1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039564539.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457136..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461073,4464667..4464689))
location: region:4457136-4464689:-1
so has part: feature:4464667-4464689:-1:exon
so has part: feature:4460965-4461073:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457136-4457997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4464667-4464689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460965-4461073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460198-4460242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4457136-4457997:-1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_039564542.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457136..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461073,4463279..4463406))
location: region:4457136-4463406:-1
so has part: feature:4463279-4463406:-1:exon
so has part: feature:4460965-4461073:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457136-4457997:-1:exon

position:4463406:-1
position: 4463406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463279-4463406:-1:exon

position:4463279:-1
position: 4463279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4460965-4461073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460198-4460242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4457136-4457997:-1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564543.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457136..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459434..4459522))
location: region:4457136-4459522:-1
so has part: feature:4459434-4459522:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457136-4457997:-1:exon

position:4459522:-1
position: 4459522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4459434-4459522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4457136-4457997:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X3
translation: MGDSAMAEKVSPSLGGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQKTPFSKALPAQSVPWGAQPATWKCFLYCNGLMDHLYVCQNGNGCTAWYKAPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLQARTGSRSHYIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRMWLCRHAWLDEATFMVSFLSGAISGAVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKSFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457879..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461073,4464724..4464726))
location: region:4457879-4464726:-1
so has part: feature:4464724-4464726:-1:exon
so has part: feature:4460965-4461073:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457879-4457997:-1:exon

XP_039420475.1
type: Protein
SIO_000068: ncbiprotein

position:4457879:-1
position: 4457879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4464726:-1
position: 4464726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4464724-4464726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460965-4461073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460198-4460242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4457879-4457997:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X2
translation: MAEKVSPSLGGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQKTPFSKGKCFLYCNGLMDHLYVCQNGNGCTAWYKAPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLQARTGSRSHYIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRMWLCRHAWLDEATFMVSFLSGAISGAVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKSFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457879..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460831..4460890,4460965..4461061))
location: region:4457879-4461061:-1
so has part: feature:4460965-4461061:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457879-4457997:-1:exon

XP_039420474.1
type: Protein
SIO_000068: ncbiprotein

position:4461061:-1
position: 4461061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4460965-4461061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4457879-4457997:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X1
translation: MAEKVSPSLGGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQKTPFSKALPAQSVPWGAQPATWKCFLYCNGLMDHLYVCQNGNGCTAWYKAPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLQARTGSRSHYIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRMWLCRHAWLDEATFMVSFLSGAISGAVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKSFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457879..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461061))
location: region:4457879-4461061:-1
so has part: feature:4460965-4461061:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457879-4457997:-1:exon

XP_039420473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4460965-4461061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460198-4460242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4457879-4457997:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X1
translation: MAEKVSPSLGGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQKTPFSKALPAQSVPWGAQPATWKCFLYCNGLMDHLYVCQNGNGCTAWYKAPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLQARTGSRSHYIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRMWLCRHAWLDEATFMVSFLSGAISGAVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKSFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457879..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459243..4459310,4459434..4459543,4460198..4460242,4460831..4460890,4460965..4461061))
location: region:4457879-4461061:-1
so has part: feature:4460965-4461061:-1:exon
so has part: feature:4460831-4460890:-1:exon
so has part: feature:4460198-4460242:-1:exon
so has part: feature:4459434-4459543:-1:exon
so has part: feature:4459243-4459310:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457879-4457997:-1:exon

XP_039420476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4460965-4461061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460831-4460890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4460198-4460242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459434-4459543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459243-4459310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4457879-4457997:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X4
translation: MGSWTTCMSARMAMAAPPGTRPPPTSLAHWVMAVPATVIYFTTYDQLRDYLQARTGSRSHYIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRMWLCRHAWLDEATFMVSFLSGAISGAVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKSFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(4457879..4457997,4458069..4458149,4458230..4458311,4458462..4458571,4458667..4458840,4459001..4459125,4459434..4459522))
location: region:4457879-4459522:-1
so has part: feature:4459434-4459522:-1:exon
so has part: feature:4459001-4459125:-1:exon
so has part: feature:4458667-4458840:-1:exon
so has part: feature:4458462-4458571:-1:exon
so has part: feature:4458230-4458311:-1:exon
so has part: feature:4458069-4458149:-1:exon
so has part: feature:4457879-4457997:-1:exon

XP_039420477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4459434-4459522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4459001-4459125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4458667-4458840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458462-4458571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4458230-4458311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4458069-4458149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4457879-4457997:-1:exon

LOC104698638
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4469863..4512981
location: region:4469863-4512981:1
so has part: feature:4469863-4512981:1:exon
subclass of: SO_0000010

104698638
type: Gene
SIO_000068: ncbigene

position:4469863:1
position: 4469863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512981:1
position: 4512981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469863-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039564607.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469863..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4509515..4509647,4510015..4510237)
location: region:4469863-4510237:1
so has part: feature:4469863-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4509515-4509647:1:exon
so has part: feature:4510015-4510237:1:exon

position:4510237:1
position: 4510237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469863-4469977:1:exon

position:4469977:1
position: 4469977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

position:4488881:1
position: 4488881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4488969:1
position: 4488969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

position:4490263:1
position: 4490263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4490349:1
position: 4490349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

position:4491466:1
position: 4491466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4491552:1
position: 4491552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

position:4493046:1
position: 4493046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493111:1
position: 4493111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

position:4494934:1
position: 4494934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4495821:1
position: 4495821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

position:4497985:1
position: 4497985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4498031:1
position: 4498031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

position:4498893:1
position: 4498893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4499051:1
position: 4499051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

position:4499957:1
position: 4499957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500062:1
position: 4500062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

position:4500581:1
position: 4500581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500631:1
position: 4500631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4501048-4501313:1:exon

position:4501048:1
position: 4501048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4501313:1
position: 4501313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4504054-4504146:1:exon

position:4504054:1
position: 4504054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4504146:1
position: 4504146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4504294-4504386:1:exon

position:4504294:1
position: 4504294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4504386:1
position: 4504386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4507659-4507740:1:exon

position:4507659:1
position: 4507659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507740:1
position: 4507740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4507894-4508006:1:exon

position:4507894:1
position: 4507894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4508006:1
position: 4508006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4509515-4509647:1:exon

position:4509515:1
position: 4509515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509647:1
position: 4509647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4510015-4510237:1:exon

position:4510015:1
position: 4510015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_039564617.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469864..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469864-4512981:1
so has part: feature:4469864-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

position:4469864:1
position: 4469864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469864-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501150-4501313:1:exon

position:4501150:1
position: 4501150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039564608.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469864..4469977,4488881..4488969,4490263..4490349,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469864-4512981:1
so has part: feature:4469864-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469864-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_039564613.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469864..4469977,4488881..4488969,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469864-4512981:1
so has part: feature:4469864-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469864-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039564605.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

position:4469865:1
position: 4469865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039564609.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039564614.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039564610.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501150-4501313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039564615.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4501150-4501313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039564606.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039564611.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
so has part: feature:4469865-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469865-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039564616.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469865..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469865-4512981:1
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urn:…
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urn:…
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LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039564612.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469866..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469866-4512981:1
so has part: feature:4469866-4469977:1:exon
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so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
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so has part: feature:4501048-4501313:1:exon
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so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
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position:4469866:1
position: 4469866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039564624.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469869..4469977,4488881..4488969,4490263..4490349,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469869-4512981:1
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so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
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so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

position:4469869:1
position: 4469869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039564622.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
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position:4469870:1
position: 4469870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 14
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LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039564628.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
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urn:…
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urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039564623.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039564619.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4490263..4490349,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
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urn:…
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039564626.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4490263..4490349,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 8
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039564621.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469870..4469977,4488881..4488969,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469870-4512981:1
so has part: feature:4469870-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469870-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039564618.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469871..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469871-4512981:1
so has part: feature:4469871-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

position:4469871:1
position: 4469871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469871-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_039564627.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469871..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469871-4512981:1
so has part: feature:4469871-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469871-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_039564625.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469871..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469871-4512981:1
so has part: feature:4469871-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469871-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104698638
product: microtubule-associated protein tau, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039564620.1
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4469872..4469977,4488881..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4512981)
location: region:4469872-4512981:1
so has part: feature:4469872-4469977:1:exon
so has part: feature:4488881-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4512981:1:exon

position:4469872:1
position: 4469872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469872-4469977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4488881-4488969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4512981:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X1
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIINKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420539.1
type: Protein
SIO_000068: ncbiprotein

position:4488927:1
position: 4488927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4510230:1
position: 4510230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X5
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X10
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X6
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIINKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501150-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X11
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501150-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X13
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501150..4501313,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501150-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4501150-4501313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X2
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIINKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X7
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X12
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4498893..4499051,4499957..4500062,4501048..4501313,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X8
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGEPSSPKLQPGPQECVGEAVKGASQPPEQGAGLQQPPLSRETKAPAAAPTRIEVTIPIPLDMYQGSGASEGSSELWDQGGREGVGVEPELGRGVRTEGLAGAGGTGDHKDGPSPLCARAPLKEDSSGRERDQDRDIDETSEQGLPSLVDHRVSLGPEKGLCPAAAKETREEHDGENKSKDVLRDTPGEALLTEAESHKAGEDQEEKQQPLGGEGGLDVTPSEPSESVSQKEAEPKEGEDSGPVLEAAKLPAEVEDDMKDKDAPSEEVVPDAGGRRTPRRKPSGLAADKATRVPLLKGRVDKEGTEADEKKPKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIINKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4494934..4495821,4497985..4498031,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4494934-4495821:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494934-4495821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X14
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIINKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4504294..4504386,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4504294-4504386:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4498893-4499051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4499957-4500062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4500581-4500631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501048-4501313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4504054-4504146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4504294-4504386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4507659-4507740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4507894-4508006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4510015-4510230:1:exon

LOC104698638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104698638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X18
translation: MEDHAPGQEKHFSSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGAEQHGEIPEGTTAEEAGVGATPNLEDHAAGDATQGRVDKEGTEADEKKPKKSSPCPAKPPGSIPPLRHTAPPKPPSSPASASKRASPAAARPAGTGTQETRAKAKTGTARTGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKTPPAAAKTEKGEQPKSGDRSGYTSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKTRVQPSAAPMPDLKNVKSKIGSTDNLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINLVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC104698638
subclass of: SO_0000673
so part of: LOC104698638
location: join(4488927..4488969,4490263..4490349,4491466..4491552,4493046..4493111,4497985..4498031,4498893..4499051,4499957..4500062,4500581..4500631,4501048..4501313,4504054..4504146,4507659..4507740,4507894..4508006,4510015..4510230)
location: region:4488927-4510230:1
so has part: feature:4488927-4488969:1:exon
so has part: feature:4490263-4490349:1:exon
so has part: feature:4491466-4491552:1:exon
so has part: feature:4493046-4493111:1:exon
so has part: feature:4497985-4498031:1:exon
so has part: feature:4498893-4499051:1:exon
so has part: feature:4499957-4500062:1:exon
so has part: feature:4500581-4500631:1:exon
so has part: feature:4501048-4501313:1:exon
so has part: feature:4504054-4504146:1:exon
so has part: feature:4507659-4507740:1:exon
so has part: feature:4507894-4508006:1:exon
so has part: feature:4510015-4510230:1:exon

XP_039420556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4488927-4488969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4490263-4490349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491466-4491552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4493046-4493111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4497985-4498031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4498893-4499051:1:exon