Corvus cornix cornix isolate S_Up_H32 chromosome 21, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 21, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_046350.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_046350.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022203.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6847934
topology: linear
so has quality: SO_0000987
location: 1..6847934
location: region:1-6847934:1
RO_0002162: 932674

NC_046350
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6847934:1
position: 6847934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6847934:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 21
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

UBR4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2041..77585)
location: region:2041-77585:-1
so has part: feature:2041-77585:-1:exon
subclass of: SO_0000010

104697588
type: Gene
SIO_000068: ncbigene

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position: 2041
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type: ReverseStrandPosition
type: ExactPosition

position:77585:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:2041-77585:-1:exon

UBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBR4
product: ubiquitin protein ligase E3 component n-recognin 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_039563836.1
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2041..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40013,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77585))
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UBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBR4
product: ubiquitin protein ligase E3 component n-recognin 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039563835.1
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2041..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40031,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77585))
location: region:2041-77585:-1
so has part: feature:77449-77585:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:77449-77585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

urn:…
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SIO_000628: feature:72836-72939:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 12
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SIO_000628: feature:68474-68611:-1:exon

urn:…
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SIO_000628: feature:67880-67997:-1:exon

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SIO_000628: feature:67276-67463:-1:exon

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SIO_000300: 16
SIO_000628: feature:66534-66693:-1:exon

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UBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBR4
product: ubiquitin protein ligase E3 component n-recognin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039563834.1
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
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location: region:2041-77585:-1
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UBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBR4
product: ubiquitin protein ligase E3 component n-recognin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039563833.1
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
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UBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBR4
product: ubiquitin protein ligase E3 component n-recognin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039563832.1
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
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SIO_000628: feature:70687-70828:-1:exon

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urn:…
SIO_000300: 13
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urn:…
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SIO_000628: feature:66534-66693:-1:exon

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SIO_000628: feature:61753-61935:-1:exon

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urn:…
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SIO_000628: feature:59571-59728:-1:exon

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SIO_000628: feature:11973-12100:-1:exon

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SIO_000628: feature:11484-11591:-1:exon

urn:…
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SIO_000628: feature:10146-10265:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:2041-2513:-1:exon

UBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UBR4 isoform X5
translation: MAAGGAGAAAGPGWDVAVRPLLSASYSAFDMKELPQLLASVIESESEILHHDKQYEPFYSSFVALSTHYITTVCGLIPRNQLQSVAAACKVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQTVKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRVSSSPSITTETQVEGESEDQAATDQTSATKTKSIFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVSANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLTPTRLQDVTVLALSCLYAGVSVATCMAILHVGSTQQVRTGSTSSKEEDYENDAATIVQKCLEIYEMIGQAISNSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDIIARTKEGVGSPKLGPGKGHQGFGVLSVVLANHAIKLLSSLFQDLQVEALHKGWESDGPPAVLDIMAQSTSIQRIQRLIDSVPLTNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSSTEEDSSQDDDSEPILGQWFEETISPSKEKVAPPPPPPPPPLESSPRVKSPNKQSAGENGNILASRKDPELFLSLASNILNFITSSMLNSRNNFIRNYLSVSLSEQHMATLASIIKEVDKDGLKGTSDEEFAAALYHFNHSLVTSDLQSPALQNTLLQQLGVAPFSEGPWPLYIHPQSLSVLSRLLLIWQHKATAQGDPDVPECLKVWERFVGTLKQNALQGTLPSDTEDLNVEHLQLLLLIFHNFSERGRRSIMMLCIQTIVELTANMETQQCSVPLIVARLLLVFDYLLHQYSKAPVYLFEQVQYNLLTPPIGWVSGSQDSSRRTSVPLYHGFKEVEENWTKHSSSDSAPQPRFYCILSPEASEDDLNRLDSTVCEVLFSRATKYDELYAALTSLLAAGSQFDTLRRRENKNVTALEACALQYYFLILWRILGILPPSKSYMHHLAMNTPEMSDCDLLHTLRWSSRLQIPSYVVWIKDHLIKQGMKAEHAAPLIELTSSKCISVKYDVEIAEEYFARQISSFCTVDCTTILQLHEVPSLQSIYTLDAAISKIQVSLDEHFSKLAAETDPHKSSEITKNLLPATLQLIDTYATFTRSYLLRSLSEEGSSDNKPSEEKLRGYAAVLAIGSSRCKSNTLGPTLVQNLPSAVQTLCESWNNIHTNEFPNIGSWRNAFANDTIPAESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVWSDDLNPPQVIHSLLPLLLETSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYNILAHHSDPNSGLDESILEECLQHLEKQLESSQARKAMEEFFSESGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLRLCGSLAQLACVEPVRLQAWLTRMTMSPPKDSDQLDVVQENRQLLQLLTTYIVRENSQVGEGVCTVLLSTLIPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHGAAVDWLGRCKKYLSQKNVVEKMNANVMQGKHVTILECTCHIVSYLADVTNALSQSSGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRVPESVIRHASTSPAEKAKVTISEGKGPDEEKPKKSSLCRNVEGCREELQSQANFSFAPLVLEMLNFLMDAIQVNFQQASAMGSSSRAQQALNELHTLDKSVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAI…
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2102..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40013,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77579))
location: region:2102-77579:-1
so has part: feature:77449-77579:-1:exon
so has part: feature:73790-73887:-1:exon
so has part: feature:72836-72939:-1:exon
so has part: feature:72046-72175:-1:exon
so has part: feature:71800-71939:-1:exon
so has part: feature:71356-71458:-1:exon
so has part: feature:70687-70828:-1:exon
so has part: feature:70457-70581:-1:exon
so has part: feature:69679-69803:-1:exon
so has part: feature:69384-69443:-1:exon
so has part: feature:69064-69254:-1:exon
so has part: feature:68729-68828:-1:exon
so has part: feature:68474-68611:-1:exon
so has part: feature:67880-67997:-1:exon
so has part: feature:67276-67463:-1:exon
so has part: feature:66534-66693:-1:exon
so has part: feature:66320-66405:-1:exon
so has part: feature:65171-65340:-1:exon
so has part: feature:64235-64517:-1:exon
so has part: feature:63523-63655:-1:exon
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so has part: feature:47973-48136:-1:exon
so has part: feature:47547-47763:-1:exon
so has part: feature:46950-47166:-1:exon
so has part: feature:44414-44477:-1:exon
so has part: feature:43854-43988:-1:exon
so has part: feature:43362-43536:-1:exon
so has part: feature:42994-43131:-1:exon
so has part: feature:42440-42561:-1:exon
so has part: feature:41760-41871:-1:exon
so has part: feature:41110-41240:-1:exon
so has part: feature:40794-40971:-1:exon
so has part: feature:40508-40612:-1:exon
so has part: feature:39876-40013:-1:exon
so has part: feature:37265-37433:-1:exon
so has part: feature:36341-36437:-1:exon
so has part: feature:35841-35948:-1:exon
so has part: feature:35244-35360:-1:exon
so has part: feature:33382-33591:-1:exon
so has part: feature:32553-32702:-1:exon
so has part: feature:31692-31919:-1:exon

XP_039419770.1
type: Protein
SIO_000068: ncbiprotein

position:2102:-1
position: 2102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77579:-1
position: 77579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77449-77579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72836-72939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72046-72175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71800-71939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71356-71458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70687-70828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70457-70581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69679-69803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69384-69443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69064-69254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68729-68828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68474-68611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67880-67997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67276-67463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66534-66693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66320-66405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65171-65340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64235-64517:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63523-63655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63017-63096:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62389-62517:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61753-61935:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:61457-61579:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:61138-61367:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:60390-60514:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59849-59946:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:59571-59728:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:58673-58882:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:58043-58144:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:57036-57136:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56660-56858:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:56351-56539:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55790-55853:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:55409-55600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:54766-54836:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:54493-54640:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:53812-54039:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:53444-53614:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:53164-53346:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:52194-52352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:51438-51590:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:50925-51152:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:49987-50144:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:48721-48892:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:48376-48577:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:47973-48136:-1:exon

urn:…
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SIO_000628: feature:47547-47763:-1:exon

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urn:…
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SIO_000628: feature:35244-35360:-1:exon

urn:…
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SIO_000628: feature:33382-33591:-1:exon

urn:…
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SIO_000628: feature:32553-32702:-1:exon

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SIO_000628: feature:31532-31610:-1:exon

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SIO_000628: feature:29574-29742:-1:exon

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SIO_000628: feature:28902-29046:-1:exon

urn:…
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SIO_000628: feature:26820-27013:-1:exon

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SIO_000628: feature:25557-25796:-1:exon

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SIO_000628: feature:24222-24360:-1:exon

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SIO_000628: feature:23602-23727:-1:exon

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SIO_000628: feature:22241-22584:-1:exon

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urn:…
SIO_000300: 85
SIO_000628: feature:18457-18598:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:17679-17760:-1:exon

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SIO_000628: feature:16596-16769:-1:exon

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SIO_000628: feature:16064-16185:-1:exon

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SIO_000628: feature:14782-14862:-1:exon

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SIO_000628: feature:12484-12571:-1:exon

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SIO_000300: 92
SIO_000628: feature:11973-12100:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:11484-11591:-1:exon

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SIO_000628: feature:10146-10265:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:8857-9047:-1:exon

urn:…
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SIO_000628: feature:8377-8550:-1:exon

urn:…
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SIO_000628: feature:7807-7906:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:6775-6993:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:6427-6540:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:5876-6018:-1:exon

urn:…
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SIO_000628: feature:5426-5551:-1:exon

urn:…
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SIO_000628: feature:4291-4485:-1:exon

urn:…
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SIO_000628: feature:2102-2513:-1:exon

UBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UBR4 isoform X4
translation: MAAGGAGAAAGPGWDVAVRPLLSASYSAFDMKELPQLLASVIESESEILHHDKQYEPFYSSFVALSTHYITTVCGLIPRNQLQSVAAACKVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQTVKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRVSSSPSITTETQVEGESEDQAATDQTSATKTKSIFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVSANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLTPTRLQDVTVLALSCLYAGVSVATCMAILHVGSTQQVRTGSTSSKEEDYENDAATIVQKCLEIYEMIGQAISNSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDIIARTKEGVGSPKLGPGKGHQGFGVLSVVLANHAIKLLSSLFQDLQVEALHKGWESDGPPAVLDIMAQSTSIQRIQRLIDSVPLTNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSSTEEDSSQDDDSEPILGQWFEETISPSKEKVAPPPPPPPPPLESSPRVKSPNKQSAGENGNILASRKDPELFLSLASNILNFITSSMLNSRNNFIRNYLSVSLSEQHMATLASIIKEVDKDGLKGTSDEEFAAALYHFNHSLVTSDLQSPALQNTLLQQLGVAPFSEGPWPLYIHPQSLSVLSRLLLIWQHKATAQGDPDVPECLKVWERFVGTLKQNALQGTLPSDTEDLNVEHLQLLLLIFHNFSERGRRSIMMLCIQTIVELTANMETQQCSVPLIVARLLLVFDYLLHQYSKAPVYLFEQVQYNLLTPPIGWVSGSQDSSRRTSVPLYHGFKEVEENWTKHSSSDSAPQPRFYCILSPEASEDDLNRLDSTVCEVLFSRATKYDELYAALTSLLAAGSQFDTLRRRENKNVTALEACALQYYFLILWRILGILPPSKSYMHHLAMNTPEMSDCDLLHTLRWSSRLQIPSYVVWIKDHLIKQGMKAEHAAPLIELTSSKCISVKYDVEIAEEYFARQISSFCTVDCTTILQLHEVPSLQSIYTLDAAISKIQVSLDEHFSKLAAETDPHKSSEITKNLLPATLQLIDTYATFTRSYLLRSLSEEGSSDNKPSEEKLRGYAAVLAIGSSRCKSNTLGPTLVQNLPSAVQTLCESWNNIHTNEFPNIGSWRNAFANDTIPAESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVWSDDLNPPQVIHSLLPLLLETSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYNILAHHSDPNSGLDESILEECLQHLEKQLESSQARKAMEEFFSESGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLRLCGSLAQLACVEPVRLQAWLTRMTMSPPKDSDQLDVVQENRQLLQLLTTYIVRENSQVGEGVCTVLLSTLIPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHGAAVDWLGRCKKYLSQKNVVEKMNANVMQGKHVTILECTCHIVSYLADVTNALSQSSGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRVPESVIRHASTSPAEKAKVTISEGKGPDEEKPKKSSLCRNVEGCREELQSQANFSFAPLVLEMLNFLMDAIQVNFQQASAMGSSSRAQQALNELHTLDKSVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAI…
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2102..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40031,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77579))
location: region:2102-77579:-1
so has part: feature:77449-77579:-1:exon
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so has part: feature:71800-71939:-1:exon
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so has part: feature:66534-66693:-1:exon
so has part: feature:66320-66405:-1:exon
so has part: feature:65171-65340:-1:exon
so has part: feature:64235-64517:-1:exon
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so has part: feature:63017-63096:-1:exon
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so has part: feature:61138-61367:-1:exon
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so has part: feature:42994-43131:-1:exon
so has part: feature:42440-42561:-1:exon
so has part: feature:41760-41871:-1:exon
so has part: feature:41110-41240:-1:exon
so has part: feature:40794-40971:-1:exon
so has part: feature:40508-40612:-1:exon
so has part: feature:39876-40031:-1:exon
so has part: feature:37265-37433:-1:exon
so has part: feature:36341-36437:-1:exon
so has part: feature:35841-35948:-1:exon
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so has part: feature:33382-33591:-1:exon
so has part: feature:32553-32702:-1:exon
so has part: feature:31692-31919:-1:exon

XP_039419769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77449-77579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72836-72939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72046-72175:-1:exon

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SIO_000300: 5
SIO_000628: feature:71800-71939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71356-71458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70687-70828:-1:exon

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SIO_000300: 8
SIO_000628: feature:70457-70581:-1:exon

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SIO_000300: 9
SIO_000628: feature:69679-69803:-1:exon

urn:…
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SIO_000628: feature:69384-69443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69064-69254:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:67880-67997:-1:exon

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SIO_000300: 15
SIO_000628: feature:67276-67463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66534-66693:-1:exon

urn:…
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SIO_000628: feature:66320-66405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65171-65340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64235-64517:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63523-63655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63017-63096:-1:exon

urn:…
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SIO_000628: feature:62389-62517:-1:exon

urn:…
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SIO_000628: feature:61753-61935:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:61457-61579:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:61138-61367:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:60390-60514:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59849-59946:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:59571-59728:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:58673-58882:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:58043-58144:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:57036-57136:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56660-56858:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:56351-56539:-1:exon

urn:…
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SIO_000628: feature:55790-55853:-1:exon

urn:…
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SIO_000628: feature:55409-55600:-1:exon

urn:…
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SIO_000628: feature:54766-54836:-1:exon

urn:…
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SIO_000628: feature:54493-54640:-1:exon

urn:…
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SIO_000628: feature:53812-54039:-1:exon

urn:…
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SIO_000628: feature:53444-53614:-1:exon

urn:…
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SIO_000628: feature:53164-53346:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:52194-52352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:51438-51590:-1:exon

urn:…
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SIO_000628: feature:50925-51152:-1:exon

urn:…
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SIO_000628: feature:48376-48577:-1:exon

urn:…
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SIO_000628: feature:47973-48136:-1:exon

urn:…
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SIO_000628: feature:43854-43988:-1:exon

urn:…
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SIO_000628: feature:43362-43536:-1:exon

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SIO_000628: feature:42994-43131:-1:exon

urn:…
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SIO_000628: feature:19117-19226:-1:exon

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SIO_000628: feature:18457-18598:-1:exon

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urn:…
SIO_000300: 93
SIO_000628: feature:11484-11591:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:10146-10265:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:8857-9047:-1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:8377-8550:-1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:7807-7906:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:6775-6993:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:6427-6540:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:5876-6018:-1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:5426-5551:-1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:4291-4485:-1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:2102-2513:-1:exon

UBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UBR4 isoform X3
translation: MAAGGAGAAAGPGWDVAVRPLLSASYSAFDMKELPQLLASVIESESEILHHDKQYEPFYSSFVALSTHYITTVCGLIPRNQLQSVAAACKVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQTVKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRVSSSPSITTETQVEGESEDQAATDQTSATKTKSIFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVSANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLTPTRLQDVTVLALSCLYAGVSVATCMAILHVGSTQQVRTGSTSSKEEDYENDAATIVQKCLEIYEMIGQAISNSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDIIARTKEGVGSPKLGPGKGHQGFGVLSVVLANHAIKLLSSLFQDLQVEALHKGWESDGPPAVLDIMAQSTSIQRIQRLIDSVPLTNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSSTEEDSSQDDDSEPILGQWFEETISPSKEKVAPPPPPPPPPLESSPRVKSPNKQSAGENGNILASRKDPELFLSLASNILNFITSSMLNSRNNFIRNYLSVSLSEQHMATLASIIKEVDKDGLKGTSDEEFAAALYHFNHSLVTSDLQSPALQNTLLQQLGVAPFSEGPWPLYIHPQSLSVLSRLLLIWQHKATAQGDPDVPECLKVWERFVGTLKQNALQGTLPSDTEDLNVEHLQLLLLIFHNFSERGRRSIMMLCIQTIVELTANMETQQCSVPLIVARLLLVFDYLLHQYSKAPVYLFEQVQYNLLTPPIGWVSGSQDSSRRTSVPLYHGFKEVEENWTKHSSSDSAPQPRFYCILSPEASEDDLNRLDSTVCEVLFSRATKYDELYAALTSLLAAGSQFDTLRRRENKNVTALEACALQYYFLILWRILGILPPSKSYMHHLAMNTPEMSDCDLLHTLRWSSRLQIPSYVVWIKDHLIKQGMKAEHAAPLIELTSSKCISVKYDVEIAEEYFARQISSFCTVDCTTILQLHEVPSLQSIYTLDAAISKIQVSLDEHFSKLAAETDPHKSSEITKNLLPATLQLIDTYATFTRSYLLRSLSEEGSSDNKPSEEKLRGYAAVLAIGSSRCKSNTLGPTLVQNLPSAVQTLCESWNNIHTNEFPNIGSWRNAFANDTIPAESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVWSDDLNPPQVIHSLLPLLLETSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYNILAHHSDPNSGLDESILEECLQHLEKQLESSQARKAMEEFFSESGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLRLCGSLAQLACVEPVRLQAWLTRMTMSPPKDSDQLDVVQENRQLLQLLTTYIVRENSQVGEGVCTVLLSTLIPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHGAAVDWLGRCKKYLSQKNVVEKMNANVMQGKHVTILECTCHIVSYLADVTNALSQSSGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRVPESVIRHASTSPAEKAKVTISEGKGPDEEKPKKSSLCRNVEGCREELQSQANFSFAPLVLEMLNFLMDAIQVNFQQASAMGSSSRAQQALNELHTLDKSVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAI…
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2102..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40007,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,45576..45608,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77579))
location: region:2102-77579:-1
so has part: feature:77449-77579:-1:exon
so has part: feature:73790-73887:-1:exon
so has part: feature:72836-72939:-1:exon
so has part: feature:72046-72175:-1:exon
so has part: feature:71800-71939:-1:exon
so has part: feature:71356-71458:-1:exon
so has part: feature:70687-70828:-1:exon
so has part: feature:70457-70581:-1:exon
so has part: feature:69679-69803:-1:exon
so has part: feature:69384-69443:-1:exon
so has part: feature:69064-69254:-1:exon
so has part: feature:68729-68828:-1:exon
so has part: feature:68474-68611:-1:exon
so has part: feature:67880-67997:-1:exon
so has part: feature:67276-67463:-1:exon
so has part: feature:66534-66693:-1:exon
so has part: feature:66320-66405:-1:exon
so has part: feature:65171-65340:-1:exon
so has part: feature:64235-64517:-1:exon
so has part: feature:63523-63655:-1:exon
so has part: feature:63017-63096:-1:exon
so has part: feature:62389-62517:-1:exon
so has part: feature:61753-61935:-1:exon
so has part: feature:61457-61579:-1:exon
so has part: feature:61138-61367:-1:exon
so has part: feature:60390-60514:-1:exon
so has part: feature:59849-59946:-1:exon
so has part: feature:59571-59728:-1:exon
so has part: feature:58673-58882:-1:exon
so has part: feature:58043-58144:-1:exon
so has part: feature:57036-57136:-1:exon
so has part: feature:56660-56858:-1:exon
so has part: feature:56351-56539:-1:exon
so has part: feature:55790-55853:-1:exon
so has part: feature:55409-55600:-1:exon
so has part: feature:54766-54836:-1:exon
so has part: feature:54493-54640:-1:exon
so has part: feature:53812-54039:-1:exon
so has part: feature:53444-53614:-1:exon
so has part: feature:53164-53346:-1:exon
so has part: feature:52194-52352:-1:exon
so has part: feature:51438-51590:-1:exon
so has part: feature:50925-51152:-1:exon
so has part: feature:49987-50144:-1:exon
so has part: feature:48721-48892:-1:exon
so has part: feature:48376-48577:-1:exon
so has part: feature:47973-48136:-1:exon
so has part: feature:47547-47763:-1:exon
so has part: feature:46950-47166:-1:exon
so has part: feature:45576-45608:-1:exon
so has part: feature:44414-44477:-1:exon
so has part: feature:43854-43988:-1:exon
so has part: feature:43362-43536:-1:exon
so has part: feature:42994-43131:-1:exon
so has part: feature:42440-42561:-1:exon
so has part: feature:41760-41871:-1:exon
so has part: feature:41110-41240:-1:exon
so has part: feature:40794-40971:-1:exon
so has part: feature:40508-40612:-1:exon
so has part: feature:39876-40007:-1:exon
so has part: feature:37265-37433:-1:exon
so has part: feature:36341-36437:-1:exon
so has part: feature:35841-35948:-1:exon
so has part: feature:35244-35360:-1:exon
so has part: feature:33382-33591:-1:exon
so has part: feature:32553-32702:-1:exon

XP_039419768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77449-77579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72836-72939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72046-72175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71800-71939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71356-71458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70687-70828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70457-70581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69679-69803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69384-69443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69064-69254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68729-68828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68474-68611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67880-67997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67276-67463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66534-66693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66320-66405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65171-65340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64235-64517:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63523-63655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63017-63096:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62389-62517:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61753-61935:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:61457-61579:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:61138-61367:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:60390-60514:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59849-59946:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:59571-59728:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:58673-58882:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:58043-58144:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:57036-57136:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56660-56858:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:56351-56539:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55790-55853:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:55409-55600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:54766-54836:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:54493-54640:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:53812-54039:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:53444-53614:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:53164-53346:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:52194-52352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:51438-51590:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:50925-51152:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:49987-50144:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:48721-48892:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:48376-48577:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:47973-48136:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:47547-47763:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:46950-47166:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:45576-45608:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:44414-44477:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:43854-43988:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:43362-43536:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:42994-43131:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:42440-42561:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:41760-41871:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:41110-41240:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:40794-40971:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:40508-40612:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:39876-40007:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:37265-37433:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:36341-36437:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:35841-35948:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:35244-35360:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:33382-33591:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:32553-32702:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:31692-31919:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:31532-31610:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:30613-30855:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:29574-29742:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:28902-29046:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:28083-28168:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:27525-27612:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:26820-27013:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:25557-25796:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:24222-24360:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:23602-23727:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:23316-23444:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:22241-22584:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:21875-21965:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:21429-21513:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:21134-21261:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:20339-20468:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:19699-19856:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:19117-19226:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:18457-18598:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:17679-17760:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:16596-16769:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:16064-16185:-1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:14993-15190:-1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:14782-14862:-1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:12484-12571:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:11973-12100:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:11484-11591:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:10146-10265:-1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:8857-9047:-1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:8377-8550:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:7807-7906:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:6775-6993:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:6427-6540:-1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:5876-6018:-1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:5426-5551:-1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:4291-4485:-1:exon

urn:…
SIO_000300: 104
SIO_000628: feature:2102-2513:-1:exon

UBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UBR4 isoform X2
translation: MAAGGAGAAAGPGWDVAVRPLLSASYSAFDMKELPQLLASVIESESEILHHDKQYEPFYSSFVALSTHYITTVCGLIPRNQLQSVAAACKVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQTVKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRVSSSPSITTETQVEGESEDQAATDQTSATKTKSIFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVSANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLTPTRLQDVTVLALSCLYAGVSVATCMAILHVGSTQQVRTGSTSSKEEDYENDAATIVQKCLEIYEMIGQAISNSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDIIARTKEGVGSPKLGPGKGHQGFGVLSVVLANHAIKLLSSLFQDLQVEALHKGWESDGPPAVLDIMAQSTSIQRIQRLIDSVPLTNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSSTEEDSSQDDDSEPILGQWFEETISPSKEKVAPPPPPPPPPLESSPRVKSPNKQSAGENGNILASRKDPELFLSLASNILNFITSSMLNSRNNFIRNYLSVSLSEQHMATLASIIKEVDKDGLKGTSDEEFAAALYHFNHSLVTSDLQSPALQNTLLQQLGVAPFSEGPWPLYIHPQSLSVLSRLLLIWQHKATAQGDPDVPECLKVWERFVGTLKQNALQGTLPSDTEDLNVEHLQLLLLIFHNFSERGRRSIMMLCIQTIVELTANMETQQCSVPLIVARLLLVFDYLLHQYSKAPVYLFEQVQYNLLTPPIGWVSGSQDSSRRTSVPLYHGFKEVEENWTKHSSSDSAPQPRFYCILSPEASEDDLNRLDSTVCEVLFSRATKYDELYAALTSLLAAGSQFDTLRRRENKNVTALEACALQYYFLILWRILGILPPSKSYMHHLAMNTPEMSDCDLLHTLRWSSRLQIPSYVVWIKDHLIKQGMKAEHAAPLIELTSSKCISVKYDVEIAEEYFARQISSFCTVDCTTILQLHEVPSLQSIYTLDAAISKIQVSLDEHFSKLAAETDPHKSSEITKNLLPATLQLIDTYATFTRSYLLRSLSEEGSSDNKPSEEKLRGYAAVLAIGSSRCKSNTLGPTLVQNLPSAVQTLCESWNNIHTNEFPNIGSWRNAFANDTIPAESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVWSDDLNPPQVIHSLLPLLLETSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYNILAHHSDPNSGLDESILEECLQHLEKQLESSQARKAMEEFFSESGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLRLCGSLAQLACVEPVRLQAWLTRMTMSPPKDSDQLDVVQENRQLLQLLTTYIVRENSQVGEGVCTVLLSTLIPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHGAAVDWLGRCKKYLSQKNVVEKMNANVMQGKHVTILECTCHIVSYLADVTNALSQSSGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRVPESVIRHASTSPAEKAKVTISEGKGPDEEKPKKSSLCRNVEGCREELQSQANFSFAPLVLEMLNFLMDAIQVNFQQASAMGSSSRAQQALNELHTLDKSVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAI…
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2102..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40013,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,45576..45608,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77579))
location: region:2102-77579:-1
so has part: feature:77449-77579:-1:exon
so has part: feature:73790-73887:-1:exon
so has part: feature:72836-72939:-1:exon
so has part: feature:72046-72175:-1:exon
so has part: feature:71800-71939:-1:exon
so has part: feature:71356-71458:-1:exon
so has part: feature:70687-70828:-1:exon
so has part: feature:70457-70581:-1:exon
so has part: feature:69679-69803:-1:exon
so has part: feature:69384-69443:-1:exon
so has part: feature:69064-69254:-1:exon
so has part: feature:68729-68828:-1:exon
so has part: feature:68474-68611:-1:exon
so has part: feature:67880-67997:-1:exon
so has part: feature:67276-67463:-1:exon
so has part: feature:66534-66693:-1:exon
so has part: feature:66320-66405:-1:exon
so has part: feature:65171-65340:-1:exon
so has part: feature:64235-64517:-1:exon
so has part: feature:63523-63655:-1:exon
so has part: feature:63017-63096:-1:exon
so has part: feature:62389-62517:-1:exon
so has part: feature:61753-61935:-1:exon
so has part: feature:61457-61579:-1:exon
so has part: feature:61138-61367:-1:exon
so has part: feature:60390-60514:-1:exon
so has part: feature:59849-59946:-1:exon
so has part: feature:59571-59728:-1:exon
so has part: feature:58673-58882:-1:exon
so has part: feature:58043-58144:-1:exon
so has part: feature:57036-57136:-1:exon
so has part: feature:56660-56858:-1:exon
so has part: feature:56351-56539:-1:exon
so has part: feature:55790-55853:-1:exon
so has part: feature:55409-55600:-1:exon
so has part: feature:54766-54836:-1:exon
so has part: feature:54493-54640:-1:exon
so has part: feature:53812-54039:-1:exon
so has part: feature:53444-53614:-1:exon
so has part: feature:53164-53346:-1:exon
so has part: feature:52194-52352:-1:exon
so has part: feature:51438-51590:-1:exon
so has part: feature:50925-51152:-1:exon
so has part: feature:49987-50144:-1:exon
so has part: feature:48721-48892:-1:exon
so has part: feature:48376-48577:-1:exon
so has part: feature:47973-48136:-1:exon
so has part: feature:47547-47763:-1:exon
so has part: feature:46950-47166:-1:exon
so has part: feature:45576-45608:-1:exon
so has part: feature:44414-44477:-1:exon
so has part: feature:43854-43988:-1:exon
so has part: feature:43362-43536:-1:exon
so has part: feature:42994-43131:-1:exon
so has part: feature:42440-42561:-1:exon
so has part: feature:41760-41871:-1:exon
so has part: feature:41110-41240:-1:exon
so has part: feature:40794-40971:-1:exon
so has part: feature:40508-40612:-1:exon
so has part: feature:39876-40013:-1:exon
so has part: feature:37265-37433:-1:exon
so has part: feature:36341-36437:-1:exon
so has part: feature:35841-35948:-1:exon
so has part: feature:35244-35360:-1:exon
so has part: feature:33382-33591:-1:exon
so has part: feature:32553-32702:-1:exon

XP_039419767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77449-77579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72836-72939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72046-72175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71800-71939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71356-71458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70687-70828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70457-70581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69679-69803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69384-69443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69064-69254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68729-68828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68474-68611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67880-67997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67276-67463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66534-66693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66320-66405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65171-65340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64235-64517:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63523-63655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63017-63096:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62389-62517:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61753-61935:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:61457-61579:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:61138-61367:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:60390-60514:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59849-59946:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:59571-59728:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:58673-58882:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:58043-58144:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:57036-57136:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56660-56858:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:56351-56539:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55790-55853:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:55409-55600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:54766-54836:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:54493-54640:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:53812-54039:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:53444-53614:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:53164-53346:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:52194-52352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:51438-51590:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:50925-51152:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:49987-50144:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:48721-48892:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:48376-48577:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:47973-48136:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:47547-47763:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:46950-47166:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:45576-45608:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:44414-44477:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:43854-43988:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:43362-43536:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:42994-43131:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:42440-42561:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:41760-41871:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:41110-41240:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:40794-40971:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:40508-40612:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:39876-40013:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:37265-37433:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:36341-36437:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:35841-35948:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:35244-35360:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:33382-33591:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:32553-32702:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:31692-31919:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:31532-31610:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:30613-30855:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:29574-29742:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:28902-29046:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:28083-28168:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:27525-27612:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:26820-27013:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:25557-25796:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:24222-24360:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:23602-23727:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:23316-23444:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:22241-22584:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:21875-21965:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:21429-21513:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:21134-21261:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:20339-20468:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:19699-19856:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:19117-19226:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:18457-18598:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:17679-17760:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:16596-16769:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:16064-16185:-1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:14993-15190:-1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:14782-14862:-1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:12484-12571:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:11973-12100:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:11484-11591:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:10146-10265:-1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:8857-9047:-1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:8377-8550:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:7807-7906:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:6775-6993:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:6427-6540:-1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:5876-6018:-1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:5426-5551:-1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:4291-4485:-1:exon

urn:…
SIO_000300: 104
SIO_000628: feature:2102-2513:-1:exon

UBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UBR4 isoform X1
translation: MAAGGAGAAAGPGWDVAVRPLLSASYSAFDMKELPQLLASVIESESEILHHDKQYEPFYSSFVALSTHYITTVCGLIPRNQLQSVAAACKVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQTVKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRVSSSPSITTETQVEGESEDQAATDQTSATKTKSIFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVSANSFFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLTPTRLQDVTVLALSCLYAGVSVATCMAILHVGSTQQVRTGSTSSKEEDYENDAATIVQKCLEIYEMIGQAISNSRRAGGEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDIIARTKEGVGSPKLGPGKGHQGFGVLSVVLANHAIKLLSSLFQDLQVEALHKGWESDGPPAVLDIMAQSTSIQRIQRLIDSVPLTNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSSTEEDSSQDDDSEPILGQWFEETISPSKEKVAPPPPPPPPPLESSPRVKSPNKQSAGENGNILASRKDPELFLSLASNILNFITSSMLNSRNNFIRNYLSVSLSEQHMATLASIIKEVDKDGLKGTSDEEFAAALYHFNHSLVTSDLQSPALQNTLLQQLGVAPFSEGPWPLYIHPQSLSVLSRLLLIWQHKATAQGDPDVPECLKVWERFVGTLKQNALQGTLPSDTEDLNVEHLQLLLLIFHNFSERGRRSIMMLCIQTIVELTANMETQQCSVPLIVARLLLVFDYLLHQYSKAPVYLFEQVQYNLLTPPIGWVSGSQDSSRRTSVPLYHGFKEVEENWTKHSSSDSAPQPRFYCILSPEASEDDLNRLDSTVCEVLFSRATKYDELYAALTSLLAAGSQFDTLRRRENKNVTALEACALQYYFLILWRILGILPPSKSYMHHLAMNTPEMSDCDLLHTLRWSSRLQIPSYVVWIKDHLIKQGMKAEHAAPLIELTSSKCISVKYDVEIAEEYFARQISSFCTVDCTTILQLHEVPSLQSIYTLDAAISKIQVSLDEHFSKLAAETDPHKSSEITKNLLPATLQLIDTYATFTRSYLLRSLSEEGSSDNKPSEEKLRGYAAVLAIGSSRCKSNTLGPTLVQNLPSAVQTLCESWNNIHTNEFPNIGSWRNAFANDTIPAESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVWSDDLNPPQVIHSLLPLLLETSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYNILAHHSDPNSGLDESILEECLQHLEKQLESSQARKAMEEFFSESGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLRLCGSLAQLACVEPVRLQAWLTRMTMSPPKDSDQLDVVQENRQLLQLLTTYIVRENSQVGEGVCTVLLSTLIPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHGAAVDWLGRCKKYLSQKNVVEKMNANVMQGKHVTILECTCHIVSYLADVTNALSQSSGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRVPESVIRHASTSPAEKAKVTISEGKGPDEEKPKKSSLCRNVEGCREELQSQANFSFAPLVLEMLNFLMDAIQVNFQQASAMGSSSRAQQALNELHTLDKSVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAI…
SIO_010081: UBR4
subclass of: SO_0000673
so part of: UBR4
location: complement(join(2102..2513,4291..4485,5426..5551,5876..6018,6427..6540,6775..6993,7807..7906,8377..8550,8857..9047,10146..10265,11484..11591,11973..12100,12484..12571,14782..14862,14993..15190,16064..16185,16596..16769,17679..17760,18457..18598,19117..19226,19699..19856,20339..20468,21134..21261,21429..21513,21875..21965,22241..22584,23316..23444,23602..23727,24222..24360,25557..25796,26820..27013,27525..27612,28083..28168,28902..29046,29574..29742,30613..30855,31532..31610,31692..31919,32553..32702,33382..33591,35244..35360,35841..35948,36341..36437,37265..37433,39876..40031,40508..40612,40794..40971,41110..41240,41760..41871,42440..42561,42994..43131,43362..43536,43854..43988,44414..44477,45576..45608,46950..47166,47547..47763,47973..48136,48376..48577,48721..48892,49987..50144,50925..51152,51438..51590,52194..52352,53164..53346,53444..53614,53812..54039,54493..54640,54766..54836,55409..55600,55790..55853,56351..56539,56660..56858,57036..57136,58043..58144,58673..58882,59571..59728,59849..59946,60390..60514,61138..61367,61457..61579,61753..61935,62389..62517,63017..63096,63523..63655,64235..64517,65171..65340,66320..66405,66534..66693,67276..67463,67880..67997,68474..68611,68729..68828,69064..69254,69384..69443,69679..69803,70457..70581,70687..70828,71356..71458,71800..71939,72046..72175,72836..72939,73790..73887,77449..77579))
location: region:2102-77579:-1
so has part: feature:77449-77579:-1:exon
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so has part: feature:41110-41240:-1:exon
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so has part: feature:33382-33591:-1:exon
so has part: feature:32553-32702:-1:exon

XP_039419766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77449-77579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73790-73887:-1:exon

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SIO_000628: feature:72836-72939:-1:exon

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SIO_000628: feature:72046-72175:-1:exon

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SIO_000628: feature:71800-71939:-1:exon

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SIO_000628: feature:71356-71458:-1:exon

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SIO_000628: feature:70687-70828:-1:exon

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SIO_000628: feature:70457-70581:-1:exon

urn:…
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SIO_000628: feature:69679-69803:-1:exon

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SIO_000628: feature:69384-69443:-1:exon

urn:…
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SIO_000628: feature:69064-69254:-1:exon

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SIO_000628: feature:68729-68828:-1:exon

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SIO_000628: feature:68474-68611:-1:exon

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SIO_000628: feature:67880-67997:-1:exon

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SIO_000628: feature:67276-67463:-1:exon

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SIO_000628: feature:66534-66693:-1:exon

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SIO_000628: feature:66320-66405:-1:exon

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SIO_000628: feature:65171-65340:-1:exon

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SIO_000628: feature:64235-64517:-1:exon

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SIO_000628: feature:63523-63655:-1:exon

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SIO_000628: feature:63017-63096:-1:exon

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SIO_000628: feature:61753-61935:-1:exon

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SIO_000628: feature:61457-61579:-1:exon

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SIO_000628: feature:61138-61367:-1:exon

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SIO_000628: feature:60390-60514:-1:exon

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SIO_000628: feature:59849-59946:-1:exon

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SIO_000628: feature:59571-59728:-1:exon

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SIO_000628: feature:56660-56858:-1:exon

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SIO_000628: feature:52194-52352:-1:exon

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SIO_000628: feature:51438-51590:-1:exon

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SIO_000628: feature:2102-2513:-1:exon

EMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78256..89806)
location: region:78256-89806:-1
so has part: feature:78256-89806:-1:exon
subclass of: SO_0000010

104697587
type: Gene
SIO_000068: ncbigene

position:78256:-1
position: 78256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89806:-1
position: 89806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78256-89806:-1:exon

EMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EMC1
product: ER membrane protein complex subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039564039.1
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(78256..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84251..84259,84593..84709,85371..85467,85699..85821,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89806))
location: region:78256-89806:-1
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so has part: feature:79442-79571:-1:exon
so has part: feature:78256-79248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89806:-1:exon

position:89665:-1
position: 89665
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

position:89424:-1
position: 89424
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type: ExactPosition

position:89548:-1
position: 89548
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

position:89135:-1
position: 89135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89200:-1
position: 89200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

position:88899:-1
position: 88899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88992:-1
position: 88992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

position:88168:-1
position: 88168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88296:-1
position: 88296
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

position:87911:-1
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type: ReverseStrandPosition
type: ExactPosition

position:88037:-1
position: 88037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

position:87431:-1
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type: ReverseStrandPosition
type: ExactPosition

position:87580:-1
position: 87580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

position:86947:-1
position: 86947
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type: ReverseStrandPosition
type: ExactPosition

position:87114:-1
position: 87114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

position:86528:-1
position: 86528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86599:-1
position: 86599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:85699-85821:-1:exon

position:85699:-1
position: 85699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85821:-1
position: 85821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:85371-85467:-1:exon

position:85371:-1
position: 85371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85467:-1
position: 85467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84593-84709:-1:exon

position:84593:-1
position: 84593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84709:-1
position: 84709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:84251-84259:-1:exon

position:84251:-1
position: 84251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84259:-1
position: 84259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:83574-83773:-1:exon

position:83574:-1
position: 83574
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type: ReverseStrandPosition
type: ExactPosition

position:83773:-1
position: 83773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:83181-83330:-1:exon

position:83181:-1
position: 83181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83330:-1
position: 83330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:82690-82851:-1:exon

position:82690:-1
position: 82690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82851:-1
position: 82851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:82330-82449:-1:exon

position:82330:-1
position: 82330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82449:-1
position: 82449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:81982-82119:-1:exon

position:81982:-1
position: 81982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82119:-1
position: 82119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:81461-81634:-1:exon

position:81461:-1
position: 81461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81634:-1
position: 81634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:80669-80879:-1:exon

position:80669:-1
position: 80669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80879:-1
position: 80879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:80106-80190:-1:exon

position:80106:-1
position: 80106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80190:-1
position: 80190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:79442-79571:-1:exon

position:79442:-1
position: 79442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79571:-1
position: 79571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:78256-79248:-1:exon

position:79248:-1
position: 79248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EMC1
product: ER membrane protein complex subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_039564037.1
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(78256..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84251..84259,84593..84709,85371..85467,85699..85821,86033..86092,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89806))
location: region:78256-89806:-1
so has part: feature:89665-89806:-1:exon
so has part: feature:89424-89548:-1:exon
so has part: feature:89135-89200:-1:exon
so has part: feature:88899-88992:-1:exon
so has part: feature:88168-88296:-1:exon
so has part: feature:87911-88037:-1:exon
so has part: feature:87431-87580:-1:exon
so has part: feature:86947-87114:-1:exon
so has part: feature:86528-86599:-1:exon
so has part: feature:86033-86092:-1:exon
so has part: feature:85699-85821:-1:exon
so has part: feature:85371-85467:-1:exon
so has part: feature:84593-84709:-1:exon
so has part: feature:84251-84259:-1:exon
so has part: feature:83574-83773:-1:exon
so has part: feature:83181-83330:-1:exon
so has part: feature:82690-82851:-1:exon
so has part: feature:82330-82449:-1:exon
so has part: feature:81982-82119:-1:exon
so has part: feature:81461-81634:-1:exon
so has part: feature:80669-80879:-1:exon
so has part: feature:80106-80190:-1:exon
so has part: feature:79442-79571:-1:exon
so has part: feature:78256-79248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86033-86092:-1:exon

position:86033:-1
position: 86033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86092:-1
position: 86092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:85699-85821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85371-85467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84593-84709:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:84251-84259:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83574-83773:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:83181-83330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82690-82851:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:82330-82449:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81982-82119:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81461-81634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:80669-80879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80106-80190:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:79442-79571:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:78256-79248:-1:exon

EMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EMC1
product: ER membrane protein complex subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564038.1
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(78256..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84593..84709,85371..85467,85699..85821,86033..86092,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89805))
location: region:78256-89805:-1
so has part: feature:89665-89805:-1:exon
so has part: feature:89424-89548:-1:exon
so has part: feature:89135-89200:-1:exon
so has part: feature:88899-88992:-1:exon
so has part: feature:88168-88296:-1:exon
so has part: feature:87911-88037:-1:exon
so has part: feature:87431-87580:-1:exon
so has part: feature:86947-87114:-1:exon
so has part: feature:86528-86599:-1:exon
so has part: feature:86033-86092:-1:exon
so has part: feature:85699-85821:-1:exon
so has part: feature:85371-85467:-1:exon
so has part: feature:84593-84709:-1:exon
so has part: feature:83574-83773:-1:exon
so has part: feature:83181-83330:-1:exon
so has part: feature:82690-82851:-1:exon
so has part: feature:82330-82449:-1:exon
so has part: feature:81982-82119:-1:exon
so has part: feature:81461-81634:-1:exon
so has part: feature:80669-80879:-1:exon
so has part: feature:80106-80190:-1:exon
so has part: feature:79442-79571:-1:exon
so has part: feature:78256-79248:-1:exon

position:89805:-1
position: 89805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86033-86092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85699-85821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85371-85467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84593-84709:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83574-83773:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83181-83330:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82690-82851:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82330-82449:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:81982-82119:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81461-81634:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80669-80879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:80106-80190:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:79442-79571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:78256-79248:-1:exon

EMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 1 isoform X3
translation: MAARPRVPPPLLLVLLPVLLPLAAAVYEDQVGKFDWRQQYVGKLKFASLEASQGSKKLVVATEENVVAALNSRSGEILWRHVDKGTPEGAIDAMLIHGQDAITVSNAGRILRSWETNIGGLNWETSLDTGSFQGAALVGLPEAVKYVAVLKKAALSLHYLSNGHQKWVEHLPESESTQYQLLYSRGTGVIHVVGIVPQSHLNVLMFNVEDGEITKQVRVAAPWLRALEGSCGVVGEAVLVCADTAARSLHVCALDTEQDMRHIPLQSLELEFEDDFQARILATQPSVTGASRTQFFLQLSPSHFSLLQYKQGLLSHLRDFQQAALVSFATTGEKTVAAVLTCRSELDSLTCSNQTYNINLYLVETGQRLLDTTITFNLEQGGAKPQQLYIQVFLKKDDSVGYRALVQTEDHMLMFLQQPGKVVWSREESLAEVVSLEMVDLPLTGAQAELEGEFGKKAAIQDGLLGMFLKRLSSQLILLQAWTAHLWKMFYDARKPRSQIKNEINIDNLARDEFNLQKMMVMVTASGKLFGIESSSGTILWKQYLRNVRPGSSFKLMVQRTTAHFPHPPQCTLLVKDKETRMSFLYVFNPIFGKRSQVAPPVLKRPILQTLLLPIMDQDYAKVLLLIDDEYKVTPFPATKNVLRQLEEIAHSIYFYLVDAEQGKLSGFRLKKDLSTEESWEVAIPTEVQRIVMVKGKRSNEHVHSQGRVMGDRSVLYKSLNPNLLAVVTESTDTHHERTFIGIYLMDGVTGRIIHSSVQKKAKGPVHMVHSENWVVYQYWNTKARRNEFTVLELYEGTEQYNATAFSSLDRPILPQVLQQSYIFPSAISAMEATITERGITSRHLLIGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQIHAERFINYNQTISRMRGIYTAPSGLESTCLVVAYGLDIFQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(79069..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84251..84259,84593..84709,85371..85467,85699..85821,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89771))
location: region:79069-89771:-1
so has part: feature:89665-89771:-1:exon
so has part: feature:89424-89548:-1:exon
so has part: feature:89135-89200:-1:exon
so has part: feature:88899-88992:-1:exon
so has part: feature:88168-88296:-1:exon
so has part: feature:87911-88037:-1:exon
so has part: feature:87431-87580:-1:exon
so has part: feature:86947-87114:-1:exon
so has part: feature:86528-86599:-1:exon
so has part: feature:85699-85821:-1:exon
so has part: feature:85371-85467:-1:exon
so has part: feature:84593-84709:-1:exon
so has part: feature:84251-84259:-1:exon
so has part: feature:83574-83773:-1:exon
so has part: feature:83181-83330:-1:exon
so has part: feature:82690-82851:-1:exon
so has part: feature:82330-82449:-1:exon
so has part: feature:81982-82119:-1:exon
so has part: feature:81461-81634:-1:exon
so has part: feature:80669-80879:-1:exon
so has part: feature:80106-80190:-1:exon
so has part: feature:79442-79571:-1:exon
so has part: feature:79069-79248:-1:exon

XP_039419973.1
type: Protein
SIO_000068: ncbiprotein

position:79069:-1
position: 79069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89771:-1
position: 89771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85699-85821:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85371-85467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84593-84709:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84251-84259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83574-83773:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83181-83330:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82690-82851:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82330-82449:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:81982-82119:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81461-81634:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80669-80879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:80106-80190:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:79442-79571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:79069-79248:-1:exon

EMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 1 isoform X2
translation: MAARPRVPPPLLLVLLPVLLPLAAAVYEDQVGKFDWRQQYVGKLKFASLEASQGSKKLVVATEENVVAALNSRSGEILWRHVDKGTPEGAIDAMLIHGQDAITVSNAGRILRSWETNIGGLNWETSLDTGSFQGAALVGLPEAVKYVAVLKKAALSLHYLSNGHQKWVEHLPESESTQYQLLYSRGTGVIHVVGIVPQSHLNVLMFNVEDGEITKQVRVAAPWLRALEGSCGVVGEAVLVCADTAARSLHVCALDTEQDMRHIPLQSLELEFEDDFQARILATQPSVTGASRTQFFLQLSPSHFSLLQYKQGLLSHLRDFQQAALVSFATTGEKTVAAVLTCRSELKPGSSDGLHAGSALEDARRQDSLTCSNQTYNINLYLVETGQRLLDTTITFNLEQGGAKPQQLYIQVFLKKDDSVGYRALVQTEDHMLMFLQQPGKVVWSREESLAEVVSLEMVDLPLTGAQAELEGEFGKKADGLLGMFLKRLSSQLILLQAWTAHLWKMFYDARKPRSQIKNEINIDNLARDEFNLQKMMVMVTASGKLFGIESSSGTILWKQYLRNVRPGSSFKLMVQRTTAHFPHPPQCTLLVKDKETRMSFLYVFNPIFGKRSQVAPPVLKRPILQTLLLPIMDQDYAKVLLLIDDEYKVTPFPATKNVLRQLEEIAHSIYFYLVDAEQGKLSGFRLKKDLSTEESWEVAIPTEVQRIVMVKGKRSNEHVHSQGRVMGDRSVLYKSLNPNLLAVVTESTDTHHERTFIGIYLMDGVTGRIIHSSVQKKAKGPVHMVHSENWVVYQYWNTKARRNEFTVLELYEGTEQYNATAFSSLDRPILPQVLQQSYIFPSAISAMEATITERGITSRHLLIGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQIHAERFINYNQTISRMRGIYTAPSGLESTCLVVAYGLDIFQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(79069..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84593..84709,85371..85467,85699..85821,86033..86092,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89771))
location: region:79069-89771:-1
so has part: feature:89665-89771:-1:exon
so has part: feature:89424-89548:-1:exon
so has part: feature:89135-89200:-1:exon
so has part: feature:88899-88992:-1:exon
so has part: feature:88168-88296:-1:exon
so has part: feature:87911-88037:-1:exon
so has part: feature:87431-87580:-1:exon
so has part: feature:86947-87114:-1:exon
so has part: feature:86528-86599:-1:exon
so has part: feature:86033-86092:-1:exon
so has part: feature:85699-85821:-1:exon
so has part: feature:85371-85467:-1:exon
so has part: feature:84593-84709:-1:exon
so has part: feature:83574-83773:-1:exon
so has part: feature:83181-83330:-1:exon
so has part: feature:82690-82851:-1:exon
so has part: feature:82330-82449:-1:exon
so has part: feature:81982-82119:-1:exon
so has part: feature:81461-81634:-1:exon
so has part: feature:80669-80879:-1:exon
so has part: feature:80106-80190:-1:exon
so has part: feature:79442-79571:-1:exon
so has part: feature:79069-79248:-1:exon

XP_039419972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86033-86092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85699-85821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85371-85467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84593-84709:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83574-83773:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83181-83330:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82690-82851:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82330-82449:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:81982-82119:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81461-81634:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80669-80879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:80106-80190:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:79442-79571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:79069-79248:-1:exon

EMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 1 isoform X1
translation: MAARPRVPPPLLLVLLPVLLPLAAAVYEDQVGKFDWRQQYVGKLKFASLEASQGSKKLVVATEENVVAALNSRSGEILWRHVDKGTPEGAIDAMLIHGQDAITVSNAGRILRSWETNIGGLNWETSLDTGSFQGAALVGLPEAVKYVAVLKKAALSLHYLSNGHQKWVEHLPESESTQYQLLYSRGTGVIHVVGIVPQSHLNVLMFNVEDGEITKQVRVAAPWLRALEGSCGVVGEAVLVCADTAARSLHVCALDTEQDMRHIPLQSLELEFEDDFQARILATQPSVTGASRTQFFLQLSPSHFSLLQYKQGLLSHLRDFQQAALVSFATTGEKTVAAVLTCRSELKPGSSDGLHAGSALEDARRQDSLTCSNQTYNINLYLVETGQRLLDTTITFNLEQGGAKPQQLYIQVFLKKDDSVGYRALVQTEDHMLMFLQQPGKVVWSREESLAEVVSLEMVDLPLTGAQAELEGEFGKKAAIQDGLLGMFLKRLSSQLILLQAWTAHLWKMFYDARKPRSQIKNEINIDNLARDEFNLQKMMVMVTASGKLFGIESSSGTILWKQYLRNVRPGSSFKLMVQRTTAHFPHPPQCTLLVKDKETRMSFLYVFNPIFGKRSQVAPPVLKRPILQTLLLPIMDQDYAKVLLLIDDEYKVTPFPATKNVLRQLEEIAHSIYFYLVDAEQGKLSGFRLKKDLSTEESWEVAIPTEVQRIVMVKGKRSNEHVHSQGRVMGDRSVLYKSLNPNLLAVVTESTDTHHERTFIGIYLMDGVTGRIIHSSVQKKAKGPVHMVHSENWVVYQYWNTKARRNEFTVLELYEGTEQYNATAFSSLDRPILPQVLQQSYIFPSAISAMEATITERGITSRHLLIGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQIHAERFINYNQTISRMRGIYTAPSGLESTCLVVAYGLDIFQTRVYPSKQFDVLKDDYDYVLISSVLFGLVFATMITKRLAQVKLLNRAWR
SIO_010081: EMC1
subclass of: SO_0000673
so part of: EMC1
location: complement(join(79069..79248,79442..79571,80106..80190,80669..80879,81461..81634,81982..82119,82330..82449,82690..82851,83181..83330,83574..83773,84251..84259,84593..84709,85371..85467,85699..85821,86033..86092,86528..86599,86947..87114,87431..87580,87911..88037,88168..88296,88899..88992,89135..89200,89424..89548,89665..89771))
location: region:79069-89771:-1
so has part: feature:89665-89771:-1:exon
so has part: feature:89424-89548:-1:exon
so has part: feature:89135-89200:-1:exon
so has part: feature:88899-88992:-1:exon
so has part: feature:88168-88296:-1:exon
so has part: feature:87911-88037:-1:exon
so has part: feature:87431-87580:-1:exon
so has part: feature:86947-87114:-1:exon
so has part: feature:86528-86599:-1:exon
so has part: feature:86033-86092:-1:exon
so has part: feature:85699-85821:-1:exon
so has part: feature:85371-85467:-1:exon
so has part: feature:84593-84709:-1:exon
so has part: feature:84251-84259:-1:exon
so has part: feature:83574-83773:-1:exon
so has part: feature:83181-83330:-1:exon
so has part: feature:82690-82851:-1:exon
so has part: feature:82330-82449:-1:exon
so has part: feature:81982-82119:-1:exon
so has part: feature:81461-81634:-1:exon
so has part: feature:80669-80879:-1:exon
so has part: feature:80106-80190:-1:exon
so has part: feature:79442-79571:-1:exon
so has part: feature:79069-79248:-1:exon

XP_039419971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89665-89771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89424-89548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89135-89200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88899-88992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88168-88296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87911-88037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87431-87580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86947-87114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86528-86599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86033-86092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85699-85821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85371-85467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84593-84709:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:84251-84259:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83574-83773:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:83181-83330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82690-82851:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:82330-82449:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:81982-82119:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81461-81634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:80669-80879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80106-80190:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:79442-79571:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:79069-79248:-1:exon

MRTO4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MRTO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89897..92399
location: region:89897-92399:1
so has part: feature:89897-92399:1:exon
subclass of: SO_0000010

104697567
type: Gene
SIO_000068: ncbigene

position:89897:1
position: 89897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92399:1
position: 92399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89897-92399:1:exon

MRTO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MRTO4
product: MRT4 homolog, ribosome maturation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010412498.3
SIO_010081: MRTO4
subclass of: SO_0000673
so part of: MRTO4
location: join(89897..89971,90207..90265,90367..90470,90554..90635,90853..90920,91241..91392,91832..91908,92097..92399)
location: region:89897-92399:1
so has part: feature:89897-89971:1:exon
so has part: feature:90207-90265:1:exon
so has part: feature:90367-90470:1:exon
so has part: feature:90554-90635:1:exon
so has part: feature:90853-90920:1:exon
so has part: feature:91241-91392:1:exon
so has part: feature:91832-91908:1:exon
so has part: feature:92097-92399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89897-89971:1:exon

position:89971:1
position: 89971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90207-90265:1:exon

position:90207:1
position: 90207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90265:1
position: 90265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90367-90470:1:exon

position:90367:1
position: 90367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90470:1
position: 90470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90635:1:exon

position:90554:1
position: 90554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90635:1
position: 90635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90853-90920:1:exon

position:90853:1
position: 90853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90920:1
position: 90920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91241-91392:1:exon

position:91241:1
position: 91241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91392:1
position: 91392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91832-91908:1:exon

position:91832:1
position: 91832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91908:1
position: 91908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92097-92399:1:exon

position:92097:1
position: 92097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRTO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MRTO4
product: MRT4 homolog, ribosome maturation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039563814.1
SIO_010081: MRTO4
subclass of: SO_0000673
so part of: MRTO4
location: join(89897..89971,90207..90265,90367..90470,90554..90635,90853..90920,91241..91392,91832..91908,92024..92102)
location: region:89897-92102:1
so has part: feature:89897-89971:1:exon
so has part: feature:90207-90265:1:exon
so has part: feature:90367-90470:1:exon
so has part: feature:90554-90635:1:exon
so has part: feature:90853-90920:1:exon
so has part: feature:91241-91392:1:exon
so has part: feature:91832-91908:1:exon
so has part: feature:92024-92102:1:exon

position:92102:1
position: 92102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89897-89971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90207-90265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90367-90470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90853-90920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91241-91392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91832-91908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92024-92102:1:exon

position:92024:1
position: 92024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRTO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MRTO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA turnover protein 4 homolog isoform X1
translation: MPKSKRDRKVSLTRTPRKGLEAKQALIAELRRCVDTYKYIFVFSVANMRNNKLKDVRNAWKHSRIFFGKNKVMMVALGREPSSEYKENLHKVSKHLRGEVGLLFTNRTRDEVDEWFSKFRELDFARAGNKAPYGVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTMKFLWNSETGDFQKLVGDRAEEEEEEEEDDDDGSNED
SIO_010081: MRTO4
subclass of: SO_0000673
so part of: MRTO4
location: join(89944..89971,90207..90265,90367..90470,90554..90635,90853..90920,91241..91392,91832..91908,92097..92249)
location: region:89944-92249:1
so has part: feature:89944-89971:1:exon
so has part: feature:90207-90265:1:exon
so has part: feature:90367-90470:1:exon
so has part: feature:90554-90635:1:exon
so has part: feature:90853-90920:1:exon
so has part: feature:91241-91392:1:exon
so has part: feature:91832-91908:1:exon
so has part: feature:92097-92249:1:exon

XP_010410800.3
type: Protein
SIO_000068: ncbiprotein

position:89944:1
position: 89944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92249:1
position: 92249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89944-89971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90207-90265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90367-90470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90853-90920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91241-91392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91832-91908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92097-92249:1:exon

MRTO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MRTO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA turnover protein 4 homolog isoform X2
translation: MPKSKRDRKVSLTRTPRKGLEAKQALIAELRRCVDTYKYIFVFSVANMRNNKLKDVRNAWKHSRIFFGKNKVMMVALGREPSSEYKENLHKVSKHLRGEVGLLFTNRTRDEVDEWFSKFRELDFARAGNKAPYGVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLRNLLFC
SIO_010081: MRTO4
subclass of: SO_0000673
so part of: MRTO4
location: join(89944..89971,90207..90265,90367..90470,90554..90635,90853..90920,91241..91392,91832..91908,92024..92044)
location: region:89944-92044:1
so has part: feature:89944-89971:1:exon
so has part: feature:90207-90265:1:exon
so has part: feature:90367-90470:1:exon
so has part: feature:90554-90635:1:exon
so has part: feature:90853-90920:1:exon
so has part: feature:91241-91392:1:exon
so has part: feature:91832-91908:1:exon
so has part: feature:92024-92044:1:exon

XP_039419748.1
type: Protein
SIO_000068: ncbiprotein

position:92044:1
position: 92044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89944-89971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90207-90265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90367-90470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90853-90920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91241-91392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91832-91908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92024-92044:1:exon

AKR7A2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AKR7A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92788..97023)
location: region:92788-97023:-1
so has part: feature:92788-97023:-1:exon
subclass of: SO_0000010

104697586
type: Gene
SIO_000068: ncbigene

position:92788:-1
position: 92788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97023:-1
position: 97023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92788-97023:-1:exon

AKR7A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AKR7A2
product: aldo-keto reductase family 7 member A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 24 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563813.1
SIO_010081: AKR7A2
subclass of: SO_0000673
so part of: AKR7A2
location: complement(join(92788..93255,93787..93916,94237..94336,94435..94531,95062..95166,95702..95889,96797..97023))
location: region:92788-97023:-1
so has part: feature:96797-97023:-1:exon
so has part: feature:95702-95889:-1:exon
so has part: feature:95062-95166:-1:exon
so has part: feature:94435-94531:-1:exon
so has part: feature:94237-94336:-1:exon
so has part: feature:93787-93916:-1:exon
so has part: feature:92788-93255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96797-97023:-1:exon

position:96797:-1
position: 96797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95702-95889:-1:exon

position:95702:-1
position: 95702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95889:-1
position: 95889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95062-95166:-1:exon

position:95062:-1
position: 95062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95166:-1
position: 95166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94435-94531:-1:exon

position:94435:-1
position: 94435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94531:-1
position: 94531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94237-94336:-1:exon

position:94237:-1
position: 94237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94336:-1
position: 94336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93787-93916:-1:exon

position:93787:-1
position: 93787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93916:-1
position: 93916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:92788-93255:-1:exon

position:93255:-1
position: 93255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AKR7A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AKR7A2
product: aldo-keto reductase family 7 member A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_039563812.1
SIO_010081: AKR7A2
subclass of: SO_0000673
so part of: AKR7A2
location: complement(join(92788..93255,93787..93916,94237..94336,94435..94552,95062..95166,95702..95889,96797..97021))
location: region:92788-97021:-1
so has part: feature:96797-97021:-1:exon
so has part: feature:95702-95889:-1:exon
so has part: feature:95062-95166:-1:exon
so has part: feature:94435-94552:-1:exon
so has part: feature:94237-94336:-1:exon
so has part: feature:93787-93916:-1:exon
so has part: feature:92788-93255:-1:exon

position:97021:-1
position: 97021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96797-97021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95702-95889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95062-95166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94435-94552:-1:exon

position:94552:-1
position: 94552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94237-94336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93787-93916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92788-93255:-1:exon

AKR7A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AKR7A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aflatoxin B1 aldehyde reductase member 2 isoform X2
translation: MAARAAMAARAAGGARPAVVLGTMEMGRRAGPEASAELLRAFLRRQYRLLDTAFMYAGGESERILGTLLAGGTEPVEVATKANPWDGKTLKPESVRSQLDTSLERLQRKSVELFYLHAPDHGTPVEETLRACHELHKEGKFKELGLSNYAAWEVAEICTICKYNNWVMPTVYQGMYNATTRQVEAELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDTSQPTGRFFGNDWAQAYRDRYWKKHNFEGIALVEKALKEAYGSTAPSLASAALRWLYNHSKLQGSLGDAVIIGMSNLEQLEQNLNYSEDGPLLPAVVQAFDEAWNLSAHDCPNYFR
SIO_010081: AKR7A2
subclass of: SO_0000673
so part of: AKR7A2
location: complement(join(93094..93255,93787..93916,94237..94336,94435..94531,95062..95166,95702..95889,96797..97022))
location: region:93094-97022:-1
so has part: feature:96797-97022:-1:exon
so has part: feature:95702-95889:-1:exon
so has part: feature:95062-95166:-1:exon
so has part: feature:94435-94531:-1:exon
so has part: feature:94237-94336:-1:exon
so has part: feature:93787-93916:-1:exon
so has part: feature:93094-93255:-1:exon

XP_039419747.1
type: Protein
SIO_000068: ncbiprotein

position:93094:-1
position: 93094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97022:-1
position: 97022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96797-97022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95702-95889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95062-95166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94435-94531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94237-94336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93787-93916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93094-93255:-1:exon

AKR7A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AKR7A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aflatoxin B1 aldehyde reductase member 2 isoform X1
translation: MAARAAGGARPAVVLGTMEMGRRAGPEASAELLRAFLRRQYRLLDTAFMYAGGESERILGTLLAGGTEPVEVATKANPWDGKTLKPESVRSQLDTSLERLQRKSVELFYLHAPDHGTPVEETLRACHELHKEGKFKELGLSNYAAWEVAEICTICKYNNWVMPTVYQAVSHPVQGMYNATTRQVEAELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDTSQPTGRFFGNDWAQAYRDRYWKKHNFEGIALVEKALKEAYGSTAPSLASAALRWLYNHSKLQGSLGDAVIIGMSNLEQLEQNLNYSEDGPLLPAVVQAFDEAWNLSAHDCPNYFR
SIO_010081: AKR7A2
subclass of: SO_0000673
so part of: AKR7A2
location: complement(join(93094..93255,93787..93916,94237..94336,94435..94552,95062..95166,95702..95889,96797..97004))
location: region:93094-97004:-1
so has part: feature:96797-97004:-1:exon
so has part: feature:95702-95889:-1:exon
so has part: feature:95062-95166:-1:exon
so has part: feature:94435-94552:-1:exon
so has part: feature:94237-94336:-1:exon
so has part: feature:93787-93916:-1:exon
so has part: feature:93094-93255:-1:exon

XP_039419746.1
type: Protein
SIO_000068: ncbiprotein

position:97004:-1
position: 97004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96797-97004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95702-95889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95062-95166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94435-94552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94237-94336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93787-93916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93094-93255:-1:exon

SLC66A1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC66A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 97049..103160
location: region:97049-103160:1
so has part: feature:97049-103160:1:exon
subclass of: SO_0000010

104697566
type: Gene
SIO_000068: ncbigene

position:97049:1
position: 97049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103160:1
position: 103160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97049-103160:1:exon

SLC66A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC66A1
product: solute carrier family 66 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_010412496.3
SIO_010081: SLC66A1
subclass of: SO_0000673
so part of: SLC66A1
location: join(97049..97470,98093..98280,98876..99005,99462..99549,100601..100749,101488..101580,102076..102261,102534..103160)
location: region:97049-103160:1
so has part: feature:97049-97470:1:exon
so has part: feature:98093-98280:1:exon
so has part: feature:98876-99005:1:exon
so has part: feature:99462-99549:1:exon
so has part: feature:100601-100749:1:exon
so has part: feature:101488-101580:1:exon
so has part: feature:102076-102261:1:exon
so has part: feature:102534-103160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97049-97470:1:exon

position:97470:1
position: 97470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98093-98280:1:exon

position:98093:1
position: 98093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98280:1
position: 98280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98876-99005:1:exon

position:98876:1
position: 98876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99005:1
position: 99005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99462-99549:1:exon

position:99462:1
position: 99462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99549:1
position: 99549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100601-100749:1:exon

position:100601:1
position: 100601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100749:1
position: 100749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101488-101580:1:exon

position:101488:1
position: 101488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101580:1
position: 101580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102076-102261:1:exon

position:102076:1
position: 102076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102261:1
position: 102261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102534-103160:1:exon

position:102534:1
position: 102534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC66A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC66A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal amino acid transporter 1 homolog
translation: MAARRWRGLPFGNLSDCPNGSRWIMDVFNECAQDGWDVASVVLGLGSIGCFIAAAFPQFYQACRTGIMDQALSIYFLLGWLGGDLLNLIGSFLADQLPLQVYTAIYYVLADLGMLSLYCYYRVKSGGRAFPAPINAAFVFLSVGSLSSLSLLGSASTKDPGTFKGRSLLSAPGDELGSKPFSRTEIIGFTIGSISSVLYLCSRVPQICTNYKRKSTSGVSYFLFALVMLGNSLYGLSVLLKNPEPGQGRGDYVLHHLPWLVGSLGVLALDVVISFQFLEYRKGRPGTLEERDALLREQDESPES
SIO_010081: SLC66A1
subclass of: SO_0000673
so part of: SLC66A1
location: join(98111..98280,98876..99005,99462..99549,100601..100749,101488..101580,102076..102261,102534..102632)
location: region:98111-102632:1
so has part: feature:98111-98280:1:exon
so has part: feature:98876-99005:1:exon
so has part: feature:99462-99549:1:exon
so has part: feature:100601-100749:1:exon
so has part: feature:101488-101580:1:exon
so has part: feature:102076-102261:1:exon
so has part: feature:102534-102632:1:exon

XP_010410798.2
type: Protein
SIO_000068: ncbiprotein

position:98111:1
position: 98111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102632:1
position: 102632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98111-98280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98876-99005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99462-99549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100601-100749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101488-101580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102076-102261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102534-102632:1:exon

CAPZB
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CAPZB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105430..162702)
location: region:105430-162702:-1
so has part: feature:105430-162702:-1:exon
subclass of: SO_0000010

104697565
type: Gene
SIO_000068: ncbigene

position:105430:-1
position: 105430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162702:-1
position: 162702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105430-162702:-1:exon

CAPZB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CAPZB
product: capping actin protein of muscle Z-line subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 17 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563816.1
SIO_010081: CAPZB
subclass of: SO_0000673
so part of: CAPZB
location: complement(join(105430..106275,109333..109409,110440..110505,117204..117320,117849..117990,130821..130934,136542..136663,147848..147937,162568..162702))
location: region:105430-162702:-1
so has part: feature:162568-162702:-1:exon
so has part: feature:147848-147937:-1:exon
so has part: feature:136542-136663:-1:exon
so has part: feature:130821-130934:-1:exon
so has part: feature:117849-117990:-1:exon
so has part: feature:117204-117320:-1:exon
so has part: feature:110440-110505:-1:exon
so has part: feature:109333-109409:-1:exon
so has part: feature:105430-106275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162568-162702:-1:exon

position:162568:-1
position: 162568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147848-147937:-1:exon

position:147848:-1
position: 147848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147937:-1
position: 147937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136542-136663:-1:exon

position:136542:-1
position: 136542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136663:-1
position: 136663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130821-130934:-1:exon

position:130821:-1
position: 130821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130934:-1
position: 130934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117849-117990:-1:exon

position:117849:-1
position: 117849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117990:-1
position: 117990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:117204-117320:-1:exon

position:117204:-1
position: 117204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117320:-1
position: 117320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110440-110505:-1:exon

position:110440:-1
position: 110440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110505:-1
position: 110505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:109333-109409:-1:exon

position:109333:-1
position: 109333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109409:-1
position: 109409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105430-106275:-1:exon

position:106275:-1
position: 106275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPZB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CAPZB
product: capping actin protein of muscle Z-line subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039563815.1
SIO_010081: CAPZB
subclass of: SO_0000673
so part of: CAPZB
location: complement(join(105430..106275,108160..108272,109333..109409,110440..110505,117204..117320,117849..117990,130821..130934,136542..136663,147848..147937,162568..162702))
location: region:105430-162702:-1
so has part: feature:162568-162702:-1:exon
so has part: feature:147848-147937:-1:exon
so has part: feature:136542-136663:-1:exon
so has part: feature:130821-130934:-1:exon
so has part: feature:117849-117990:-1:exon
so has part: feature:117204-117320:-1:exon
so has part: feature:110440-110505:-1:exon
so has part: feature:109333-109409:-1:exon
so has part: feature:108160-108272:-1:exon
so has part: feature:105430-106275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162568-162702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147848-147937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136542-136663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130821-130934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117849-117990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117204-117320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110440-110505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109333-109409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108160-108272:-1:exon

position:108160:-1
position: 108160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108272:-1
position: 108272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105430-106275:-1:exon

CAPZB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CAPZB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit beta isoform X2
translation: MFTAGRRRKRTGRGLGATGTDREAPPFYAPRTRPADMSDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSVQTFADKSKQEALKNDLVEALKRKQQS
SIO_010081: CAPZB
subclass of: SO_0000673
so part of: CAPZB
location: complement(join(106188..106275,109333..109409,110440..110505,117204..117320,117849..117990,130821..130934,136542..136663,147848..147937,162568..162678))
location: region:106188-162678:-1
so has part: feature:162568-162678:-1:exon
so has part: feature:147848-147937:-1:exon
so has part: feature:136542-136663:-1:exon
so has part: feature:130821-130934:-1:exon
so has part: feature:117849-117990:-1:exon
so has part: feature:117204-117320:-1:exon
so has part: feature:110440-110505:-1:exon
so has part: feature:109333-109409:-1:exon
so has part: feature:106188-106275:-1:exon

XP_039419750.1
type: Protein
SIO_000068: ncbiprotein

position:106188:-1
position: 106188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162678:-1
position: 162678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162568-162678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147848-147937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136542-136663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130821-130934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117849-117990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117204-117320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110440-110505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109333-109409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106188-106275:-1:exon

CAPZB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CAPZB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit beta isoform X1
translation: MFTAGRRRKRTGRGLGATGTDREAPPFYAPRTRPADMSDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKYKQLQRELSQVLTQRQIYIQPDN
SIO_010081: CAPZB
subclass of: SO_0000673
so part of: CAPZB
location: complement(join(108170..108272,109333..109409,110440..110505,117204..117320,117849..117990,130821..130934,136542..136663,147848..147937,162568..162678))
location: region:108170-162678:-1
so has part: feature:162568-162678:-1:exon
so has part: feature:147848-147937:-1:exon
so has part: feature:136542-136663:-1:exon
so has part: feature:130821-130934:-1:exon
so has part: feature:117849-117990:-1:exon
so has part: feature:117204-117320:-1:exon
so has part: feature:110440-110505:-1:exon
so has part: feature:109333-109409:-1:exon
so has part: feature:108170-108272:-1:exon

XP_039419749.1
type: Protein
SIO_000068: ncbiprotein

position:108170:-1
position: 108170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162568-162678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147848-147937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136542-136663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130821-130934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117849-117990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117204-117320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110440-110505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109333-109409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108170-108272:-1:exon

MICOS10
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MICOS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 171621..186999
location: region:171621-186999:1
so has part: feature:171621-186999:1:exon
subclass of: SO_0000010

104697585
type: Gene
SIO_000068: ncbigene

position:171621:1
position: 171621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186999:1
position: 186999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171621-186999:1:exon

MICOS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MICOS10
product: mitochondrial contact site and cristae organizing system subunit 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564053.1
SIO_010081: MICOS10
subclass of: SO_0000673
so part of: MICOS10
location: join(171621..171726,183238..183285,183863..183972,186755..186999)
location: region:171621-186999:1
so has part: feature:171621-171726:1:exon
so has part: feature:183238-183285:1:exon
so has part: feature:183863-183972:1:exon
so has part: feature:186755-186999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171621-171726:1:exon

position:171726:1
position: 171726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183238-183285:1:exon

position:183238:1
position: 183238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183285:1
position: 183285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183863-183972:1:exon

position:183863:1
position: 183863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183972:1
position: 183972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186755-186999:1:exon

position:186755:1
position: 186755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MICOS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MICOS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC10
translation: MASEGDLGRKWDRCVADSAVKLGAGFGLGIVFSVIFFKRKAWPIAFGSGMGLGMAYSNCQHDFQSPYLLHGKFVKEQ
SIO_010081: MICOS10
subclass of: SO_0000673
so part of: MICOS10
location: join(171660..171726,183238..183285,183863..183972,186755..186763)
location: region:171660-186763:1
so has part: feature:171660-171726:1:exon
so has part: feature:183238-183285:1:exon
so has part: feature:183863-183972:1:exon
so has part: feature:186755-186763:1:exon

XP_039419987.1
type: Protein
SIO_000068: ncbiprotein

position:171660:1
position: 171660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186763:1
position: 186763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171660-171726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183238-183285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183863-183972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186755-186763:1:exon

NBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 198295..211216
location: region:198295-211216:1
so has part: feature:198295-211216:1:exon
subclass of: SO_0000010

104697584
type: Gene
SIO_000068: ncbigene

position:198295:1
position: 198295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211216:1
position: 211216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198295-211216:1:exon

NBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NBL1
product: NBL1, DAN family BMP antagonist
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019293664.2
SIO_010081: NBL1
subclass of: SO_0000673
so part of: NBL1
location: join(198295..198396,208251..208445,208638..208749,209942..211216)
location: region:198295-211216:1
so has part: feature:198295-198396:1:exon
so has part: feature:208251-208445:1:exon
so has part: feature:208638-208749:1:exon
so has part: feature:209942-211216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198295-198396:1:exon

position:198396:1
position: 198396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208251-208445:1:exon

position:208251:1
position: 208251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208445:1
position: 208445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208638-208749:1:exon

position:208638:1
position: 208638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208749:1
position: 208749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209942-211216:1:exon

position:209942:1
position: 209942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroblastoma suppressor of tumorigenicity 1
translation: MRPPSPGWCRILAELAMMLWFVVGALFPALLLAAPPPINKLALFPDKSAWCEAKNITQIVGHSGCESKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPAQSMWEIVTLDCPGNEEIPRVDKLVEKILHCSCQACGKEPSHEGALFNVYLNAEENMPHEGPGPHHYPHHQQELEEPPASSHHHHEEEGEE
SIO_010081: NBL1
subclass of: SO_0000673
so part of: NBL1
location: join(198374..198396,208251..208445,208638..208749,209942..210196)
location: region:198374-210196:1
so has part: feature:198374-198396:1:exon
so has part: feature:208251-208445:1:exon
so has part: feature:208638-208749:1:exon
so has part: feature:209942-210196:1:exon

XP_019149209.1
type: Protein
SIO_000068: ncbiprotein

position:198374:1
position: 198374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210196:1
position: 210196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198374-198396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208251-208445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208638-208749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209942-210196:1:exon

HTR6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HTR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214252..219870
location: region:214252-219870:1
so has part: feature:214252-219870:1:exon
subclass of: SO_0000010

120411098
type: Gene
SIO_000068: ncbigene

position:214252:1
position: 214252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219870:1
position: 219870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214252-219870:1:exon

HTR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HTR6
product: 5-hydroxytryptamine receptor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039563818.1
SIO_010081: HTR6
subclass of: SO_0000673
so part of: HTR6
location: join(214252..216206,217746..217904,218167..219870)
location: region:214252-219870:1
so has part: feature:214252-216206:1:exon
so has part: feature:217746-217904:1:exon
so has part: feature:218167-219870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214252-216206:1:exon

position:216206:1
position: 216206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217746-217904:1:exon

position:217746:1
position: 217746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217904:1
position: 217904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218167-219870:1:exon

position:218167:1
position: 218167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HTR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 6
translation: MEGDLGAPNASVLGEHSLIVGSSWVAAFLCFIILLTTAGNFLLILLIVTQRSLRNTSNYFLVSLFMSDLMVGLVVMPPAMLNQLYGRWVLRGDFCSLWASFDVMCCSASILNLCVISLDRYLLITSPLRYKLRMTSCRALALILATWTLAALASFLPIKMGWHELEFEVRALNVTGRGDEDQCRLLVSLPYALVASCLTFFLPSAAISFTYCRILLAARKQAVQVASLTSNVATTDEATPQVPRAPSQPLAGSESRRFTNKHSKKALKASLTLGILLGMFFVAWLPFFITNVAQAVCGCVPAGFFDVLTWLGYCNSTMNPIIYPLFMRDFKRAMGKFLPCCRRSGEPRPSAISLSMRNSNSGPRAATSLKNVLTLQAETDSVDSGAPGSDPRLLPAPPGPGARSVSLWDAEPPDTELQLGTPVA
SIO_010081: HTR6
subclass of: SO_0000673
so part of: HTR6
location: join(215484..216206,217746..217904,218167..218559)
location: region:215484-218559:1
so has part: feature:215484-216206:1:exon
so has part: feature:217746-217904:1:exon
so has part: feature:218167-218559:1:exon

XP_039419752.1
type: Protein
SIO_000068: ncbiprotein

position:215484:1
position: 215484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218559:1
position: 218559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215484-216206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217746-217904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218167-218559:1:exon

TMCO4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TMCO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(219970..265031)
location: region:219970-265031:-1
so has part: feature:219970-265031:-1:exon
subclass of: SO_0000010

104697562
type: Gene
SIO_000068: ncbigene

position:219970:-1
position: 219970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265031:-1
position: 265031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219970-265031:-1:exon

TMCO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMCO4
product: transmembrane and coiled-coil domains 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019293684.3
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(219970..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255202,259758..259804,264594..265031))
location: region:219970-265031:-1
so has part: feature:264594-265031:-1:exon
so has part: feature:259758-259804:-1:exon
so has part: feature:255018-255202:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:219970-221977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264594-265031:-1:exon

position:264594:-1
position: 264594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259758-259804:-1:exon

position:259758:-1
position: 259758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259804:-1
position: 259804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255018-255202:-1:exon

position:255018:-1
position: 255018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255202:-1
position: 255202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254444-254618:-1:exon

position:254444:-1
position: 254444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254618:-1
position: 254618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250529-250556:-1:exon

position:250529:-1
position: 250529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250556:-1
position: 250556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248538-248670:-1:exon

position:248538:-1
position: 248538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248670:-1
position: 248670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244775-244872:-1:exon

position:244775:-1
position: 244775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244872:-1
position: 244872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244110-244253:-1:exon

position:244110:-1
position: 244110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244253:-1
position: 244253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243499-243618:-1:exon

position:243499:-1
position: 243499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243618:-1
position: 243618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242021-242185:-1:exon

position:242021:-1
position: 242021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242185:-1
position: 242185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241403-241539:-1:exon

position:241403:-1
position: 241403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241539:-1
position: 241539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:239848-239932:-1:exon

position:239848:-1
position: 239848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239932:-1
position: 239932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:236138-236255:-1:exon

position:236138:-1
position: 236138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236255:-1
position: 236255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:233165-233282:-1:exon

position:233165:-1
position: 233165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233282:-1
position: 233282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:219970-221977:-1:exon

position:221977:-1
position: 221977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMCO4
product: transmembrane and coiled-coil domains 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010412491.4
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(219970..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255202,257944..258103))
location: region:219970-258103:-1
so has part: feature:257944-258103:-1:exon
so has part: feature:255018-255202:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:219970-221977:-1:exon

position:258103:-1
position: 258103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257944-258103:-1:exon

position:257944:-1
position: 257944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255018-255202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254444-254618:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250529-250556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248538-248670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244775-244872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244110-244253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243499-243618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242021-242185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241403-241539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239848-239932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:236138-236255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233165-233282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:219970-221977:-1:exon

TMCO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMCO4
product: transmembrane and coiled-coil domains 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010412492.4
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(219970..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255202,257685..257893))
location: region:219970-257893:-1
so has part: feature:257685-257893:-1:exon
so has part: feature:255018-255202:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:219970-221977:-1:exon

position:257893:-1
position: 257893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257685-257893:-1:exon

position:257685:-1
position: 257685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255018-255202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254444-254618:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250529-250556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248538-248670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244775-244872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244110-244253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243499-243618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242021-242185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241403-241539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239848-239932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:236138-236255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233165-233282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:219970-221977:-1:exon

TMCO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMCO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 4
translation: MAVEEKWKGWASEQRKEAEHGGEKEPCVLLGRQLGEPGRFAYAALCGISLAWLFPENEQSSFRTEFIKGFVKWLDLPDAVLAAMTAFADGLGGEGTETFTDILLKDPILKENPLLITQDLLSFSLRDGYYDARARVLICHVSQLLRIPLEDLEVLEESLLESLKEQKEEESETAEVSRKKKERRKKLKRYLLIGLATVGGGTVIGLTGGLAAPLVAAGAATIIGSAGAAALGSTAGIAVMASLFGAAGAGLAGYKMKKRVGAIEEFEFLPLTEGKQLHITIAITGWLCTGKYGSFTAPWSSMLHSSEQYCLAWESKYLMELGNALDSLLNGFVNMMAQEALKFTVLSGIVTALTWPASLLTVASVIDNPWGVCLHRSAEVGKHLAHILLSRQQGQRPVTLIGFSLGARVIYFCLQEMAQEKDSQGIIEDVVLLGAPVEGEAKHWKALTRVVSGRIINGYCRGDWLLSFVYRTSSVQLNVAGLQPVDLDDRRMVNMDLSSVVNGHLDYMKQMDTILKAVGIKTKECQPEEKGSGSLFSPQAKKSQQAAGSEARGEENTGKEEDEAGGEAVPAGCAHGQDSSSSALGEPSLPCPHCSHSTDSKGQAVGKGAN
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(221645..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255196))
location: region:221645-255196:-1
so has part: feature:255018-255196:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:221645-221977:-1:exon

XP_010410793.2
type: Protein
SIO_000068: ncbiprotein

position:221645:-1
position: 221645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255196:-1
position: 255196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255018-255196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254444-254618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250529-250556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248538-248670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244775-244872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244110-244253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243499-243618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242021-242185:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241403-241539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239848-239932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:236138-236255:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233165-233282:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221645-221977:-1:exon

TMCO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMCO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 4
translation: MAVEEKWKGWASEQRKEAEHGGEKEPCVLLGRQLGEPGRFAYAALCGISLAWLFPENEQSSFRTEFIKGFVKWLDLPDAVLAAMTAFADGLGGEGTETFTDILLKDPILKENPLLITQDLLSFSLRDGYYDARARVLICHVSQLLRIPLEDLEVLEESLLESLKEQKEEESETAEVSRKKKERRKKLKRYLLIGLATVGGGTVIGLTGGLAAPLVAAGAATIIGSAGAAALGSTAGIAVMASLFGAAGAGLAGYKMKKRVGAIEEFEFLPLTEGKQLHITIAITGWLCTGKYGSFTAPWSSMLHSSEQYCLAWESKYLMELGNALDSLLNGFVNMMAQEALKFTVLSGIVTALTWPASLLTVASVIDNPWGVCLHRSAEVGKHLAHILLSRQQGQRPVTLIGFSLGARVIYFCLQEMAQEKDSQGIIEDVVLLGAPVEGEAKHWKALTRVVSGRIINGYCRGDWLLSFVYRTSSVQLNVAGLQPVDLDDRRMVNMDLSSVVNGHLDYMKQMDTILKAVGIKTKECQPEEKGSGSLFSPQAKKSQQAAGSEARGEENTGKEEDEAGGEAVPAGCAHGQDSSSSALGEPSLPCPHCSHSTDSKGQAVGKGAN
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(221645..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255196))
location: region:221645-255196:-1
so has part: feature:255018-255196:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:221645-221977:-1:exon

XP_019149229.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255018-255196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254444-254618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250529-250556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248538-248670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244775-244872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244110-244253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243499-243618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242021-242185:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241403-241539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239848-239932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:236138-236255:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233165-233282:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221645-221977:-1:exon

TMCO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMCO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 4
translation: MAVEEKWKGWASEQRKEAEHGGEKEPCVLLGRQLGEPGRFAYAALCGISLAWLFPENEQSSFRTEFIKGFVKWLDLPDAVLAAMTAFADGLGGEGTETFTDILLKDPILKENPLLITQDLLSFSLRDGYYDARARVLICHVSQLLRIPLEDLEVLEESLLESLKEQKEEESETAEVSRKKKERRKKLKRYLLIGLATVGGGTVIGLTGGLAAPLVAAGAATIIGSAGAAALGSTAGIAVMASLFGAAGAGLAGYKMKKRVGAIEEFEFLPLTEGKQLHITIAITGWLCTGKYGSFTAPWSSMLHSSEQYCLAWESKYLMELGNALDSLLNGFVNMMAQEALKFTVLSGIVTALTWPASLLTVASVIDNPWGVCLHRSAEVGKHLAHILLSRQQGQRPVTLIGFSLGARVIYFCLQEMAQEKDSQGIIEDVVLLGAPVEGEAKHWKALTRVVSGRIINGYCRGDWLLSFVYRTSSVQLNVAGLQPVDLDDRRMVNMDLSSVVNGHLDYMKQMDTILKAVGIKTKECQPEEKGSGSLFSPQAKKSQQAAGSEARGEENTGKEEDEAGGEAVPAGCAHGQDSSSSALGEPSLPCPHCSHSTDSKGQAVGKGAN
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: complement(join(221645..221977,233165..233282,236138..236255,239848..239932,241403..241539,242021..242185,243499..243618,244110..244253,244775..244872,248538..248670,250529..250556,254444..254618,255018..255196))
location: region:221645-255196:-1
so has part: feature:255018-255196:-1:exon
so has part: feature:254444-254618:-1:exon
so has part: feature:250529-250556:-1:exon
so has part: feature:248538-248670:-1:exon
so has part: feature:244775-244872:-1:exon
so has part: feature:244110-244253:-1:exon
so has part: feature:243499-243618:-1:exon
so has part: feature:242021-242185:-1:exon
so has part: feature:241403-241539:-1:exon
so has part: feature:239848-239932:-1:exon
so has part: feature:236138-236255:-1:exon
so has part: feature:233165-233282:-1:exon
so has part: feature:221645-221977:-1:exon

XP_010410794.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255018-255196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254444-254618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250529-250556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248538-248670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244775-244872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244110-244253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243499-243618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242021-242185:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241403-241539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239848-239932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:236138-236255:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233165-233282:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221645-221977:-1:exon

LOC120411099
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258181..263769
location: region:258181-263769:1
so has part: feature:258181-263769:1:exon
subclass of: SO_0000011

120411099
type: Gene
SIO_000068: ncbigene

position:258181:1
position: 258181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263769:1
position: 263769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258181-263769:1:exon

LOC120411099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411099
product: uncharacterized LOC120411099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005603513.1
SIO_010081: LOC120411099
subclass of: SO_0000673
so part of: LOC120411099
location: join(258181..258844,262477..263769)
location: region:258181-263769:1
so has part: feature:258181-258844:1:exon
so has part: feature:262477-263769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258181-258844:1:exon

position:258844:1
position: 258844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262477-263769:1:exon

position:262477:1
position: 262477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF186
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RNF186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259881..262483)
location: region:259881-262483:-1
so has part: feature:259881-262483:-1:exon
subclass of: SO_0000010

104697564
type: Gene
SIO_000068: ncbigene

position:259881:-1
position: 259881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262483:-1
position: 262483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259881-262483:-1:exon

RNF186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RNF186
product: ring finger protein 186
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019293686.3
SIO_010081: RNF186
subclass of: SO_0000673
so part of: RNF186
location: complement(259881..262483)
location: region:259881-262483:-1
so has part: feature:259881-262483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259881-262483:-1:exon

RNF186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RNF186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF186
translation: MEKSTDKPNKENRSPAPGVLQAEADSPAPAAGGAAEMSRAGSVTRNTKREKRVGFSEECTEEMEGPSGTERDSPAAFKPAVLERHSPNSKPLAVLTNTNSPEMSRLELNHQCSDTATMDMDCMICFNKYSIYRVPKLLDCQHAFCAVCLKLILRKQENTWIITCPLCRKPTFVSGGLIRTLQNKEDILEHLESLDSNPEVHTYTIGLDSNSWTQSSRDILITEENSPGDTSLAVQRLVLLLLLGVILAMLILPFMYSGKVKWVICLLLTLGLVMSMVLCCTPKFHCRCKTGSPTSCDKDIQVVTVA
SIO_010081: RNF186
subclass of: SO_0000673
so part of: RNF186
location: complement(260685..261605)
location: region:260685-261605:-1
so has part: feature:260685-261605:-1:exon

XP_019149231.1
type: Protein
SIO_000068: ncbiprotein

position:260685:-1
position: 260685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261605:-1
position: 261605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260685-261605:-1:exon

OTUD3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: OTUD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 265289..274691
location: region:265289-274691:1
so has part: feature:265289-274691:1:exon
subclass of: SO_0000010

104697560
type: Gene
SIO_000068: ncbigene

position:265289:1
position: 265289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274691:1
position: 274691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265289-274691:1:exon

OTUD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: OTUD3
product: OTU deubiquitinase 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039563819.1
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: join(265289..265460,266162..266310,267073..267185,270729..270851,271511..271636,272191..272287,272528..272709,273041..274691)
location: region:265289-274691:1
so has part: feature:265289-265460:1:exon
so has part: feature:266162-266310:1:exon
so has part: feature:267073-267185:1:exon
so has part: feature:270729-270851:1:exon
so has part: feature:271511-271636:1:exon
so has part: feature:272191-272287:1:exon
so has part: feature:272528-272709:1:exon
so has part: feature:273041-274691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:265289-265460:1:exon

position:265460:1
position: 265460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266162-266310:1:exon

position:266162:1
position: 266162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266310:1
position: 266310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267073-267185:1:exon

position:267073:1
position: 267073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267185:1
position: 267185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270729-270851:1:exon

position:270729:1
position: 270729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270851:1
position: 270851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271511-271636:1:exon

position:271511:1
position: 271511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271636:1
position: 271636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:272191-272287:1:exon

position:272191:1
position: 272191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272287:1
position: 272287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:272528-272709:1:exon

position:272528:1
position: 272528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272709:1
position: 272709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:273041-274691:1:exon

position:273041:1
position: 273041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTUD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: OTUD3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: OTU domain-containing protein 3
translation: MSRKQAAKARPAAGARRXRRPRHPPAGPAPGPASGDSGGLAGQLRALGLKLREVPGDGNCLFRALGDQLEGHSRNHLQHRQETVEYMVRQRGDFEPFVEDDVPFDKHVANLAKPGTFAGNDAIVAFARNNQMNVVIHQLNAPLWQIRGTDRSDARELHIAYRYGEHYDSVRRISDDSEAPAYLRMEMLCKNDSNKAEEVKPQKGDSEDETEVEVEDAVQKVCSATACSDIDLVSHVLEVEDYNVESAIFAILQMKEGEGIGTKEQQEPPGSEQKSCSRALWEENGSGSRIFGNQSLHQGEPKNDKGRAGSREENRASRNPKVAKKQRKEQQRLEKKKRQEERHRQKVLATKRDSADNRTETDPGNHVTLVKAMAALNI
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: join(265289..265460,266162..266310,267073..267185,270729..270851,271511..271636,272191..272287,272528..272709,273041..273214)
location: region:265289-273214:1
so has part: feature:265289-265460:1:exon
so has part: feature:266162-266310:1:exon
so has part: feature:267073-267185:1:exon
so has part: feature:270729-270851:1:exon
so has part: feature:271511-271636:1:exon
so has part: feature:272191-272287:1:exon
so has part: feature:272528-272709:1:exon
so has part: feature:273041-273214:1:exon

XP_039419753.1
type: Protein
SIO_000068: ncbiprotein

position:273214:1
position: 273214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265289-265460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266162-266310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267073-267185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270729-270851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271511-271636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272191-272287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272528-272709:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:273041-273214:1:exon

LOC104697581
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(276883..284631)
location: region:276883-284631:-1
so has part: feature:276883-284631:-1:exon
subclass of: SO_0000010

104697581
type: Gene
SIO_000068: ncbigene

position:276883:-1
position: 276883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284631:-1
position: 284631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276883-284631:-1:exon

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039563823.1
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(276883..277225,277769..277875,278104..278251,278398..281554,281980..282106,282268..282324,282753..283156))
location: region:276883-283156:-1
so has part: feature:282753-283156:-1:exon
so has part: feature:282268-282324:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:278398-281554:-1:exon
so has part: feature:278104-278251:-1:exon
so has part: feature:277769-277875:-1:exon
so has part: feature:276883-277225:-1:exon

position:283156:-1
position: 283156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282753-283156:-1:exon

position:282753:-1
position: 282753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282268-282324:-1:exon

position:282268:-1
position: 282268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282324:-1
position: 282324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:281980-282106:-1:exon

position:281980:-1
position: 281980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282106:-1
position: 282106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278398-281554:-1:exon

position:278398:-1
position: 278398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281554:-1
position: 281554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278104-278251:-1:exon

position:278104:-1
position: 278104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278251:-1
position: 278251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277769-277875:-1:exon

position:277769:-1
position: 277769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277875:-1
position: 277875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:276883-277225:-1:exon

position:277225:-1
position: 277225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic phospholipase A2 PLA-1-like isoform X2
translation: MKLLSLLLFFLGLALVSCNLLQFGMMIKKKTGKSPLAYNRYGCYCGWGGSKQPLDATDRCCHAHDCCYKRLASSHCNAKITTYKYSFQNNQITCGAGNSCQKRSCACDKAAVDCFHRAANTYRKSYDNYPQSKCKGRTPSC
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(277083..277225,277769..277875,278104..278251,278398..278425))
location: region:277083-278425:-1
so has part: feature:278398-278425:-1:exon
so has part: feature:278104-278251:-1:exon
so has part: feature:277769-277875:-1:exon
so has part: feature:277083-277225:-1:exon

XP_039419757.1
type: Protein
SIO_000068: ncbiprotein

position:277083:-1
position: 277083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278425:-1
position: 278425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278398-278425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278104-278251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277769-277875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277083-277225:-1:exon

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039563824.1
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(280861..281554,281980..282106,282268..282324,282753..283285,283367..283473,283584..283728,283997..284049,284460..284631))
location: region:280861-284631:-1
so has part: feature:284460-284631:-1:exon
so has part: feature:283997-284049:-1:exon
so has part: feature:283584-283728:-1:exon
so has part: feature:283367-283473:-1:exon
so has part: feature:282753-283285:-1:exon
so has part: feature:282268-282324:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:280861-281554:-1:exon

position:280861:-1
position: 280861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284460-284631:-1:exon

position:284460:-1
position: 284460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283997-284049:-1:exon

position:283997:-1
position: 283997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284049:-1
position: 284049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283584-283728:-1:exon

position:283584:-1
position: 283584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283728:-1
position: 283728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283367-283473:-1:exon

position:283367:-1
position: 283367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283473:-1
position: 283473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282753-283285:-1:exon

position:283285:-1
position: 283285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282268-282324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280861-281554:-1:exon

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039563825.1
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(280861..281332,281445..281554,281980..282106,282268..282324,282753..283156))
location: region:280861-283156:-1
so has part: feature:282753-283156:-1:exon
so has part: feature:282268-282324:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:281445-281554:-1:exon
so has part: feature:280861-281332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282753-283156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282268-282324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281445-281554:-1:exon

position:281445:-1
position: 281445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:280861-281332:-1:exon

position:281332:-1
position: 281332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039563820.1
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(280861..281554,281980..282106,282268..282324,282753..283156))
location: region:280861-283156:-1
so has part: feature:282753-283156:-1:exon
so has part: feature:282268-282324:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:280861-281554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282753-283156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282268-282324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280861-281554:-1:exon

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039563822.1
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(280861..281554,281980..282106,282268..282381,282753..283156))
location: region:280861-283156:-1
so has part: feature:282753-283156:-1:exon
so has part: feature:282268-282381:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:280861-281554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282753-283156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282268-282381:-1:exon

position:282381:-1
position: 282381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280861-281554:-1:exon

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104697581 isoform X1
translation: MKVLLALTMLFACSVFTAHGKHPRTFTPGLEGSTVGNLTAHGCYSGWGTSRASMDRCCLLRACCYARLAARRCRVGPVQPPLAAARAGLPTCSECSPHGSGCPFPHHPLSRGALSRALGEGLRCAVGPRRVGDVVPARRLQVRAGGVAVPGSAPPGSAPPPRQVPGPGRALLKQNLPSQSRLRAEPRRDGAGSASQPWRASSSGLLGFEARTTTLR
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(281071..281554,281980..282106,282268..282307))
location: region:281071-282307:-1
so has part: feature:282268-282307:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:281071-281554:-1:exon

XP_039419754.1
type: Protein
SIO_000068: ncbiprotein

position:281071:-1
position: 281071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282307:-1
position: 282307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282268-282307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281071-281554:-1:exon

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104697581 isoform X1
translation: MKVLLALTMLFACSVFTAHGKHPRTFTPGLEGSTVGNLTAHGCYSGWGTSRASMDRCCLLRACCYARLAARRCRVGPVQPPLAAARAGLPTCSECSPHGSGCPFPHHPLSRGALSRALGEGLRCAVGPRRVGDVVPARRLQVRAGGVAVPGSAPPGSAPPPRQVPGPGRALLKQNLPSQSRLRAEPRRDGAGSASQPWRASSSGLLGFEARTTTLR
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(281071..281554,281980..282106,282268..282307))
location: region:281071-282307:-1
so has part: feature:282268-282307:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:281071-281554:-1:exon

XP_039419756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282268-282307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281071-281554:-1:exon

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2, membrane associated-like isoform X4
translation: MKVLLALTMLFACSVFTAHGKHPRTFTPGLEGSTVGNLTAHGCYSGWGTSRASMDRCCLLRACCYARLAARRCRVGPVQPPLAAARAGLPTCRSGTWCQRGACRCERAAWLCRARLRRAQLRRRARCRGRAGRC
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(281205..281332,281445..281554,281980..282106,282268..282307))
location: region:281205-282307:-1
so has part: feature:282268-282307:-1:exon
so has part: feature:281980-282106:-1:exon
so has part: feature:281445-281554:-1:exon
so has part: feature:281205-281332:-1:exon

XP_039419759.1
type: Protein
SIO_000068: ncbiprotein

position:281205:-1
position: 281205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282268-282307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281980-282106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281445-281554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281205-281332:-1:exon

LOC104697581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697581
product: acidic phospholipase A2 PLA-1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010412512.4
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(282312..282400,282753..283285,283367..283473,283584..283728,283997..284049,284460..284631))
location: region:282312-284631:-1
so has part: feature:284460-284631:-1:exon
so has part: feature:283997-284049:-1:exon
so has part: feature:283584-283728:-1:exon
so has part: feature:283367-283473:-1:exon
so has part: feature:282753-283285:-1:exon
so has part: feature:282312-282400:-1:exon

position:282312:-1
position: 282312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284460-284631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283997-284049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283584-283728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283367-283473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282753-283285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282312-282400:-1:exon

position:282400:-1
position: 282400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2 homolog sphenotoxin basic subunit B-like isoform X3
translation: MNSLLGLAALFAWGLSPAHGSLLQLHQMISEATGKNALLHYGFYGCYCGLGGKGHPKDATDRCCQLHDTCYQNLLNYHCHAKTRLYRYSWHHDRLSCRKGSRCSYLSCECDRSLALCLRRNVRSYRKLYQFYPNKLCW
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(283161..283285,283367..283473,283584..283728,283997..284036))
location: region:283161-284036:-1
so has part: feature:283997-284036:-1:exon
so has part: feature:283584-283728:-1:exon
so has part: feature:283367-283473:-1:exon
so has part: feature:283161-283285:-1:exon

XP_039419758.1
type: Protein
SIO_000068: ncbiprotein

position:283161:-1
position: 283161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284036:-1
position: 284036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283997-284036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283584-283728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283367-283473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283161-283285:-1:exon

LOC104697581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2 homolog sphenotoxin basic subunit B-like isoform X3
translation: MNSLLGLAALFAWGLSPAHGSLLQLHQMISEATGKNALLHYGFYGCYCGLGGKGHPKDATDRCCQLHDTCYQNLLNYHCHAKTRLYRYSWHHDRLSCRKGSRCSYLSCECDRSLALCLRRNVRSYRKLYQFYPNKLCW
SIO_010081: LOC104697581
subclass of: SO_0000673
so part of: LOC104697581
location: complement(join(283161..283285,283367..283473,283584..283728,283997..284036))
location: region:283161-284036:-1
so has part: feature:283997-284036:-1:exon
so has part: feature:283584-283728:-1:exon
so has part: feature:283367-283473:-1:exon
so has part: feature:283161-283285:-1:exon

XP_010410814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283997-284036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283584-283728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283367-283473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283161-283285:-1:exon

LOC104697559
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104697559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(286226..287461)
location: region:286226-287461:-1
so has part: feature:286226-287461:-1:exon
subclass of: SO_0000010

104697559
type: Gene
SIO_000068: ncbigene

position:286226:-1
position: 286226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287461:-1
position: 287461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286226-287461:-1:exon

LOC104697559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697559
product: phospholipase A2, membrane associated-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_039564097.1
SIO_010081: LOC104697559
subclass of: SO_0000673
so part of: LOC104697559
location: complement(join(286226..286592,286839..286945,287177..287461))
location: region:286226-287461:-1
so has part: feature:287177-287461:-1:exon
so has part: feature:286839-286945:-1:exon
so has part: feature:286226-286592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287177-287461:-1:exon

position:287177:-1
position: 287177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286839-286945:-1:exon

position:286839:-1
position: 286839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286945:-1
position: 286945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286226-286592:-1:exon

position:286592:-1
position: 286592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2, membrane associated-like
translation: MPPGSPLCSGTSPSCVPAGLLPAGTSVLELERMIRVATGKSALLSYSWYGCFCGIGGTGTPVDPTDRCCQAHDCCYRRLREGKCSPLITPYSFSSTDGHVTCSDEQSWCERETCLCDTAVASCFASTLHSYNNSYRFYFKLKCQGSKLQC
SIO_010081: LOC104697559
subclass of: SO_0000673
so part of: LOC104697559
location: complement(join(286447..286592,286839..286945,287177..287376))
location: region:286447-287376:-1
so has part: feature:287177-287376:-1:exon
so has part: feature:286839-286945:-1:exon
so has part: feature:286447-286592:-1:exon

XP_039420031.1
type: Protein
SIO_000068: ncbiprotein

position:286447:-1
position: 286447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287376:-1
position: 287376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287177-287376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286839-286945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286447-286592:-1:exon

UBXN10
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: UBXN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291687..298506
location: region:291687-298506:1
so has part: feature:291687-298506:1:exon
subclass of: SO_0000010

104697557
type: Gene
SIO_000068: ncbigene

position:291687:1
position: 291687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298506:1
position: 298506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291687-298506:1:exon

UBXN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UBXN10
product: UBX domain protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039564020.1
SIO_010081: UBXN10
subclass of: SO_0000673
so part of: UBXN10
location: join(291687..291742,294482..298506)
location: region:291687-298506:1
so has part: feature:291687-291742:1:exon
so has part: feature:294482-298506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291687-291742:1:exon

position:291742:1
position: 291742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294482-298506:1:exon

position:294482:1
position: 294482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBXN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UBXN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 10
translation: MATAAFLDSAPAQLCFPLGTATLPWASAVTMHVTRPKSAKGQRRSMSHPQGMEACPCHVPAASPRELVNSRRASLTKPAFPPSQVSPEKIPKLLQQVPLKTSSSLNKYRVLPSIVRKGTGSDAVEALAERTNRLEVSEGQEDAPEGIKTLSGEQGSASTLSGSDIPTEGSSHMHCAPEQWGQQARQESPWMPPASLEEPHVLLAVRSPSGQRFEHHFKPSDSLQTVLAVAGQKLLANYQHCSVETMEVPRRSFSDLTKSLQECGILHKSLLCIRQDEHRDAADL
SIO_010081: UBXN10
subclass of: SO_0000673
so part of: UBXN10
location: 294487..295341
location: region:294487-295341:1
so has part: feature:294487-295341:1:exon

XP_039419954.1
type: Protein
SIO_000068: ncbiprotein

position:294487:1
position: 294487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295341:1
position: 295341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294487-295341:1:exon

LOC104697558
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104697558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297486..308791)
location: region:297486-308791:-1
so has part: feature:297486-308791:-1:exon
subclass of: SO_0000010

104697558
type: Gene
SIO_000068: ncbigene

position:297486:-1
position: 297486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308791:-1
position: 308791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297486-308791:-1:exon

LOC104697558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697558
product: ATP-dependent RNA helicase DDX19B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039564019.1
SIO_010081: LOC104697558
subclass of: SO_0000673
so part of: LOC104697558
location: complement(join(297486..299319,299732..299923,300517..300679,302048..302285,302674..302851,303008..303122,303668..303770,304357..304449,306252..306387,307259..307312,307684..307732,308677..308791))
location: region:297486-308791:-1
so has part: feature:308677-308791:-1:exon
so has part: feature:307684-307732:-1:exon
so has part: feature:307259-307312:-1:exon
so has part: feature:306252-306387:-1:exon
so has part: feature:304357-304449:-1:exon
so has part: feature:303668-303770:-1:exon
so has part: feature:303008-303122:-1:exon
so has part: feature:302674-302851:-1:exon
so has part: feature:302048-302285:-1:exon
so has part: feature:300517-300679:-1:exon
so has part: feature:299732-299923:-1:exon
so has part: feature:297486-299319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308677-308791:-1:exon

position:308677:-1
position: 308677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307684-307732:-1:exon

position:307684:-1
position: 307684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307732:-1
position: 307732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307259-307312:-1:exon

position:307259:-1
position: 307259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307312:-1
position: 307312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306252-306387:-1:exon

position:306252:-1
position: 306252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306387:-1
position: 306387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304357-304449:-1:exon

position:304357:-1
position: 304357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304449:-1
position: 304449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303668-303770:-1:exon

position:303668:-1
position: 303668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303770:-1
position: 303770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:303008-303122:-1:exon

position:303008:-1
position: 303008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303122:-1
position: 303122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302674-302851:-1:exon

position:302674:-1
position: 302674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302851:-1
position: 302851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302048-302285:-1:exon

position:302048:-1
position: 302048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302285:-1
position: 302285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:300517-300679:-1:exon

position:300517:-1
position: 300517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300679:-1
position: 300679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:299732-299923:-1:exon

position:299732:-1
position: 299732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299923:-1
position: 299923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:297486-299319:-1:exon

position:299319:-1
position: 299319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697558
product: ATP-dependent RNA helicase DDX19B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_019293692.2
SIO_010081: LOC104697558
subclass of: SO_0000673
so part of: LOC104697558
location: complement(join(297486..299319,299732..299923,300517..300679,302048..302285,302674..302851,303008..303122,303668..303770,304357..304449,306252..306387,306915..307086))
location: region:297486-307086:-1
so has part: feature:306915-307086:-1:exon
so has part: feature:306252-306387:-1:exon
so has part: feature:304357-304449:-1:exon
so has part: feature:303668-303770:-1:exon
so has part: feature:303008-303122:-1:exon
so has part: feature:302674-302851:-1:exon
so has part: feature:302048-302285:-1:exon
so has part: feature:300517-300679:-1:exon
so has part: feature:299732-299923:-1:exon
so has part: feature:297486-299319:-1:exon

position:307086:-1
position: 307086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306915-307086:-1:exon

position:306915:-1
position: 306915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306252-306387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304357-304449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303668-303770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303008-303122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302674-302851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302048-302285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300517-300679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299732-299923:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297486-299319:-1:exon

LOC104697558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX19B isoform X1
translation: MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQSLLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
SIO_010081: LOC104697558
subclass of: SO_0000673
so part of: LOC104697558
location: complement(join(299258..299319,299732..299923,300517..300679,302048..302285,302674..302851,303008..303122,303668..303770,304357..304449,306252..306387,307259..307312,307684..307732,308677..308733))
location: region:299258-308733:-1
so has part: feature:308677-308733:-1:exon
so has part: feature:307684-307732:-1:exon
so has part: feature:307259-307312:-1:exon
so has part: feature:306252-306387:-1:exon
so has part: feature:304357-304449:-1:exon
so has part: feature:303668-303770:-1:exon
so has part: feature:303008-303122:-1:exon
so has part: feature:302674-302851:-1:exon
so has part: feature:302048-302285:-1:exon
so has part: feature:300517-300679:-1:exon
so has part: feature:299732-299923:-1:exon
so has part: feature:299258-299319:-1:exon

XP_039419953.1
type: Protein
SIO_000068: ncbiprotein

position:299258:-1
position: 299258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308733:-1
position: 308733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308677-308733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307684-307732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307259-307312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306252-306387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304357-304449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303668-303770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303008-303122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302674-302851:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302048-302285:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300517-300679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299732-299923:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299258-299319:-1:exon

LOC104697558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX19A isoform X2
translation: MQWLFREDRAAQSLLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
SIO_010081: LOC104697558
subclass of: SO_0000673
so part of: LOC104697558
location: complement(join(299258..299319,299732..299923,300517..300679,302048..302285,302674..302851,303008..303122,303668..303770,304357..304449,306252..306387,306915..306933))
location: region:299258-306933:-1
so has part: feature:306915-306933:-1:exon
so has part: feature:306252-306387:-1:exon
so has part: feature:304357-304449:-1:exon
so has part: feature:303668-303770:-1:exon
so has part: feature:303008-303122:-1:exon
so has part: feature:302674-302851:-1:exon
so has part: feature:302048-302285:-1:exon
so has part: feature:300517-300679:-1:exon
so has part: feature:299732-299923:-1:exon
so has part: feature:299258-299319:-1:exon

XP_019149237.1
type: Protein
SIO_000068: ncbiprotein

position:306933:-1
position: 306933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306915-306933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306252-306387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304357-304449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303668-303770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303008-303122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302674-302851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302048-302285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300517-300679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299732-299923:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299258-299319:-1:exon

VWA5B1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 311021..341077
location: region:311021-341077:1
so has part: feature:311021-341077:1:exon
subclass of: SO_0000010

104697580
type: Gene
SIO_000068: ncbigene

position:311021:1
position: 311021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341077:1
position: 341077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311021-341077:1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564089.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(311021..311163,311488..311721,311871..313673,313886..314032,314191..314249,319110..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..341077)
location: region:311021-341077:1
so has part: feature:311021-311163:1:exon
so has part: feature:311488-311721:1:exon
so has part: feature:311871-313673:1:exon
so has part: feature:313886-314032:1:exon
so has part: feature:314191-314249:1:exon
so has part: feature:319110-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-341077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311021-311163:1:exon

position:311163:1
position: 311163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311488-311721:1:exon

position:311488:1
position: 311488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311721:1
position: 311721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311871-313673:1:exon

position:311871:1
position: 311871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313673:1
position: 313673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313886-314032:1:exon

position:313886:1
position: 313886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314032:1
position: 314032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314191-314249:1:exon

position:314191:1
position: 314191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314249:1
position: 314249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319110-319280:1:exon

position:319110:1
position: 319110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319280:1
position: 319280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319539-319700:1:exon

position:319539:1
position: 319539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319700:1
position: 319700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:320058-320280:1:exon

position:320058:1
position: 320058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320280:1
position: 320280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:320458-320600:1:exon

position:320458:1
position: 320458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320600:1
position: 320600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:320838-320969:1:exon

position:320838:1
position: 320838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320969:1
position: 320969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:321233-321357:1:exon

position:321233:1
position: 321233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321357:1
position: 321357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:324297-324473:1:exon

position:324297:1
position: 324297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324473:1
position: 324473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:327311-327421:1:exon

position:327311:1
position: 327311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327421:1
position: 327421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:327875-328077:1:exon

position:327875:1
position: 327875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328077:1
position: 328077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:329827-329941:1:exon

position:329827:1
position: 329827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329941:1
position: 329941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:331479-331664:1:exon

position:331479:1
position: 331479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331664:1
position: 331664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:331897-332092:1:exon

position:331897:1
position: 331897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332092:1
position: 332092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:333047-333234:1:exon

position:333047:1
position: 333047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333234:1
position: 333234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:335258-335477:1:exon

position:335258:1
position: 335258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335477:1
position: 335477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:335659-335976:1:exon

position:335659:1
position: 335659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335976:1
position: 335976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:336593-336730:1:exon

position:336593:1
position: 336593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336730:1
position: 336730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:337298-337426:1:exon

position:337298:1
position: 337298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337426:1
position: 337426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:337896-337970:1:exon

position:337896:1
position: 337896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337970:1
position: 337970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:338328-338397:1:exon

position:338328:1
position: 338328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338397:1
position: 338397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:338615-338738:1:exon

position:338615:1
position: 338615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338738:1
position: 338738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:338956-341077:1:exon

position:338956:1
position: 338956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X1
translation: MVTSLAKQMAPLSDDDDGDGDGHPDSSGHFETAVGGERPTLGIQEHPLPGEPDTLPAPGRASPPGHMLLQPVRDKSAPQLCLSPSGFLLPPSPAAEGLEEWVKLLQPPHPLLPSLPPLSQERHKPTLSKLLLPSLAFSQLDAPYHHPETPGKMPGLINRVTFSRLPLIASEVTSCVSGYAFGMTALLTYHNPDPQALEGLFVYPLDEGTTVVGFKAAVCRRMVTVQIKDKAKIDDTYFDSCSLPPGRAGDGSGRIMMDEDLERIVFVANLGMIPPLESVSIFISTSSELQTLPSGAVRVHLPAVCVPRVPQPSLENASSLSSHQLRTDKHLCGSGSPEQGSRFCLAQLLDSEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPSARSAKSIVITLASKHSFDRPVEILIHPSEPHMPHVLMEEGDMTPAEYKRHLKGKNDFIKGTRKDPSAKRKTEIIRKRLNKDIPHHPVIMLNFCPDLRTVQPGLQKAQGEFIFLVDRSKSMSGVNINHAKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQAYCEESLAIACQSIRRIQADMGSINLLSPLKWVIRQPIHRGHPRLLFLLTAGAISNPGKVLELLRDHSCSTRCYSFGIGPNACRRLVRGLAAVSRGISEFLAEGERLQPKMIGSLKKAMAPVLSDVSVEWVFPESTEVLVSPVSTSCLFPGDRLVSYGVICDTSLYLSNPRSDKRRRYSMMHSQESGSSVFFHSQEEGAGLEGWNHTRDSEGSCPAERSPDHLGLGRDPEGESDTDTGMDVKALSRRRAYSTTQISDHEPRRKVPTASDPGTALVKNPLRKTHLQDLQQVSPEPWQVDFQPLAAPRHGSATRIRGAGARRPALLQRSCVSSCHDANSPAPLDGLQEAPARGLEAADAIPSLRSSSDSRSPGDLESAQHPSLTFETETSSDWEPQDLDISTACGSLHSPRTLCKAVVKGLRNNEPVQWEVTFDICPLFRERGSQEDGDTDLWSETFHHLAAKSLIQDLEQLAERECEIEHGSGRRFQLSAVHTSKACNVISKYTAFVPVDLSTNSYLPTLVQYTHTGATSKQGNQRKQKSSGNRRHRGCSPGRPQSACGQNGDHGFYSMNAEESSPSPSSTPSSSAWERCRVPEGPLQSLSASSAQAQKSIERLFAARLTLNKTRLLVRAAKGFMSKSPSRGSEAGSEGDNESVGYLPLVSLQLACGAFLLNSAFCDAVSIPMEKLKWTSPFACHRLSLSPSGSYSTRRNSPSSEHKTLNSSQQVLVPSGQGKGPSTGDMARGAVLEDTGRLRHLSGSAAESVCRALKAEQELSPPAITIRRFSSPAECQAHSSRGWDTDGSQVQALLSDVELQQQTEPEGMLWATAVALAWLEHSSASYFIEWELVAAKASLWLSRQDFPEGSSLAMVKAAAQQLFVLLRHWDENLEFNLLCYNPGSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(313456..313673,313886..314032,314191..314249,319110..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..339678)
location: region:313456-339678:1
so has part: feature:313456-313673:1:exon
so has part: feature:313886-314032:1:exon
so has part: feature:314191-314249:1:exon
so has part: feature:319110-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-339678:1:exon

XP_039420023.1
type: Protein
SIO_000068: ncbiprotein

position:313456:1
position: 313456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339678:1
position: 339678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313456-313673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313886-314032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314191-314249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319110-319280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319539-319700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320058-320280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320458-320600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320838-320969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321233-321357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:324297-324473:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:327311-327421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:327875-328077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329827-329941:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:331479-331664:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:331897-332092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333047-333234:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:335258-335477:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:335659-335976:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:336593-336730:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:337298-337426:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:337896-337970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338328-338397:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338615-338738:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:338956-339678:1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039564091.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(313944..314032,319110..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..341077)
location: region:313944-341077:1
so has part: feature:313944-314032:1:exon
so has part: feature:319110-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-341077:1:exon

position:313944:1
position: 313944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313944-314032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319110-319280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319539-319700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320058-320280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320458-320600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320838-320969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321233-321357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324297-324473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327311-327421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327875-328077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329827-329941:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331479-331664:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:331897-332092:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:333047-333234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335258-335477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335659-335976:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336593-336730:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337298-337426:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337896-337970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338328-338397:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338615-338738:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338956-341077:1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039564090.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(314256..318232,319110..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..341077)
location: region:314256-341077:1
so has part: feature:314256-318232:1:exon
so has part: feature:319110-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-341077:1:exon

position:314256:1
position: 314256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314256-318232:1:exon

position:318232:1
position: 318232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319110-319280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319539-319700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320058-320280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320458-320600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320838-320969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321233-321357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324297-324473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327311-327421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327875-328077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329827-329941:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331479-331664:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:331897-332092:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:333047-333234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335258-335477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335659-335976:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336593-336730:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337298-337426:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337896-337970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338328-338397:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338615-338738:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338956-341077:1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X2
translation: MASPGSGRAPSYLLTVWGCIPMDASLTSLGSSWREQHLWWKERWIQSGMAEVFGRDSGACLGITALHHHLCCCFLCSFSVAALPHPGQPFLLSLALPSSFPNAVFLPEHIELVALMSSVAFAYKAPYHHPETPGKMPGLINRVTFSRLPLIASEVTSCVSGYAFGMTALLTYHNPDPQALEGLFVYPLDEGTTVVGFKAAVCRRMVTVQIKDKAKIDDTYFDSCSLPPGRAGDGSGRIMMDEDLERIVFVANLGMIPPLESVSIFISTSSELQTLPSGAVRVHLPAVCVPRVPQPSLENASSLSSHQLRTDKHLCGSGSPEQGSRFCLAQLLDSEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPSARSAKSIVITLASKHSFDRPVEILIHPSEPHMPHVLMEEGDMTPAEYKRHLKGKNDFIKGTRKDPSAKRKTEIIRKRLNKDIPHHPVIMLNFCPDLRTVQPGLQKAQGEFIFLVDRSKSMSGVNINHAKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQAYCEESLAIACQSIRRIQADMGSINLLSPLKWVIRQPIHRGHPRLLFLLTAGAISNPGKVLELLRDHSCSTRCYSFGIGPNACRRLVRGLAAVSRGISEFLAEGERLQPKMIGSLKKAMAPVLSDVSVEWVFPESTEVLVSPVSTSCLFPGDRLVSYGVICDTSLYLSNPRSDKRRRYSMMHSQESGSSVFFHSQEEGAGLEGWNHTRDSEGSCPAERSPDHLGLGRDPEGESDTDTGMDVKALSRRRAYSTTQISDHEPRRKVPTASDPGTALVKNPLRKTHLQDLQQVSPEPWQVDFQPLAAPRHGSATRIRGAGARRPALLQRSCVSSCHDANSPAPLDGLQEAPARGLEAADAIPSLRSSSDSRSPGDLESAQHPSLTFETETSSDWEPQDLDISTACGSLHSPRTLCKAVVKGLRNNEPVQWEVTFDICPLFRERGSQEDGDTDLWSETFHHLAAKSLIQDLEQLAERECEIEHGSGRRFQLSAVHTSKACNVISKYTAFVPVDLSTNSYLPTLVQYTHTGATSKQGNQRKQKSSGNRRHRGCSPGRPQSACGQNGDHGFYSMNAEESSPSPSSTPSSSAWERCRVPEGPLQSLSASSAQAQKSIERLFAARLTLNKTRLLVRAAKGFMSKSPSRGSEAGSEGDNESVGYLPLVSLQLACGAFLLNSAFCDAVSIPMEKLKWTSPFACHRLSLSPSGSYSTRRNSPSSEHKTLNSSQQVLVPSGQGKGPSTGDMARGAVLEDTGRLRHLSGSAAESVCRALKAEQELSPPAITIRRFSSPAECQAHSSRGWDTDGSQVQALLSDVELQQQTEPEGMLWATAVALAWLEHSSASYFIEWELVAAKASLWLSRQDFPEGSSLAMVKAAAQQLFVLLRHWDENLEFNLLCYNPGSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(317860..318232,319110..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..339678)
location: region:317860-339678:1
so has part: feature:317860-318232:1:exon
so has part: feature:319110-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-339678:1:exon

XP_039420024.1
type: Protein
SIO_000068: ncbiprotein

position:317860:1
position: 317860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317860-318232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319110-319280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319539-319700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320058-320280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320458-320600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320838-320969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321233-321357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324297-324473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327311-327421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327875-328077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329827-329941:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331479-331664:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:331897-332092:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:333047-333234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335258-335477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335659-335976:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336593-336730:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337298-337426:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337896-337970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338328-338397:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338615-338738:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338956-339678:1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X3
translation: MPGLINRVTFSRLPLIASEVTSCVSGYAFGMTALLTYHNPDPQALEGLFVYPLDEGTTVVGFKAAVCRRMVTVQIKDKAKIDDTYFDSCSLPPGRAGDGSGRIMMDEDLERIVFVANLGMIPPLESVSIFISTSSELQTLPSGAVRVHLPAVCVPRVPQPSLENASSLSSHQLRTDKHLCGSGSPEQGSRFCLAQLLDSEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPSARSAKSIVITLASKHSFDRPVEILIHPSEPHMPHVLMEEGDMTPAEYKRHLKGKNDFIKGTRKDPSAKRKTEIIRKRLNKDIPHHPVIMLNFCPDLRTVQPGLQKAQGEFIFLVDRSKSMSGVNINHAKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQAYCEESLAIACQSIRRIQADMGSINLLSPLKWVIRQPIHRGHPRLLFLLTAGAISNPGKVLELLRDHSCSTRCYSFGIGPNACRRLVRGLAAVSRGISEFLAEGERLQPKMIGSLKKAMAPVLSDVSVEWVFPESTEVLVSPVSTSCLFPGDRLVSYGVICDTSLYLSNPRSDKRRRYSMMHSQESGSSVFFHSQEEGAGLEGWNHTRDSEGSCPAERSPDHLGLGRDPEGESDTDTGMDVKALSRRRAYSTTQISDHEPRRKVPTASDPGTALVKNPLRKTHLQDLQQVSPEPWQVDFQPLAAPRHGSATRIRGAGARRPALLQRSCVSSCHDANSPAPLDGLQEAPARGLEAADAIPSLRSSSDSRSPGDLESAQHPSLTFETETSSDWEPQDLDISTACGSLHSPRTLCKAVVKGLRNNEPVQWEVTFDICPLFRERGSQEDGDTDLWSETFHHLAAKSLIQDLEQLAERECEIEHGSGRRFQLSAVHTSKACNVISKYTAFVPVDLSTNSYLPTLVQYTHTGATSKQGNQRKQKSSGNRRHRGCSPGRPQSACGQNGDHGFYSMNAEESSPSPSSTPSSSAWERCRVPEGPLQSLSASSAQAQKSIERLFAARLTLNKTRLLVRAAKGFMSKSPSRGSEAGSEGDNESVGYLPLVSLQLACGAFLLNSAFCDAVSIPMEKLKWTSPFACHRLSLSPSGSYSTRRNSPSSEHKTLNSSQQVLVPSGQGKGPSTGDMARGAVLEDTGRLRHLSGSAAESVCRALKAEQELSPPAITIRRFSSPAECQAHSSRGWDTDGSQVQALLSDVELQQQTEPEGMLWATAVALAWLEHSSASYFIEWELVAAKASLWLSRQDFPEGSSLAMVKAAAQQLFVLLRHWDENLEFNLLCYNPGSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: join(319142..319280,319539..319700,320058..320280,320458..320600,320838..320969,321233..321357,324297..324473,327311..327421,327875..328077,329827..329941,331479..331664,331897..332092,333047..333234,335258..335477,335659..335976,336593..336730,337298..337426,337896..337970,338328..338397,338615..338738,338956..339678)
location: region:319142-339678:1
so has part: feature:319142-319280:1:exon
so has part: feature:319539-319700:1:exon
so has part: feature:320058-320280:1:exon
so has part: feature:320458-320600:1:exon
so has part: feature:320838-320969:1:exon
so has part: feature:321233-321357:1:exon
so has part: feature:324297-324473:1:exon
so has part: feature:327311-327421:1:exon
so has part: feature:327875-328077:1:exon
so has part: feature:329827-329941:1:exon
so has part: feature:331479-331664:1:exon
so has part: feature:331897-332092:1:exon
so has part: feature:333047-333234:1:exon
so has part: feature:335258-335477:1:exon
so has part: feature:335659-335976:1:exon
so has part: feature:336593-336730:1:exon
so has part: feature:337298-337426:1:exon
so has part: feature:337896-337970:1:exon
so has part: feature:338328-338397:1:exon
so has part: feature:338615-338738:1:exon
so has part: feature:338956-339678:1:exon

XP_039420025.1
type: Protein
SIO_000068: ncbiprotein

position:319142:1
position: 319142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319142-319280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319539-319700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320058-320280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320458-320600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320838-320969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321233-321357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324297-324473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327311-327421:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327875-328077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329827-329941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:331479-331664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331897-332092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:333047-333234:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335258-335477:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335659-335976:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336593-336730:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:337298-337426:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337896-337970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:338328-338397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338615-338738:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338956-339678:1:exon

CAMK2N1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CAMK2N1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(351315..353976)
location: region:351315-353976:-1
so has part: feature:351315-353976:-1:exon
subclass of: SO_0000010

120411120
type: Gene
SIO_000068: ncbigene

position:351315:-1
position: 351315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353976:-1
position: 353976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351315-353976:-1:exon

CAMK2N1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CAMK2N1
product: calcium/calmodulin dependent protein kinase II inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 95 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039564100.1
SIO_010081: CAMK2N1
subclass of: SO_0000673
so part of: CAMK2N1
location: complement(join(351315..352833,353657..353976))
location: region:351315-353976:-1
so has part: feature:353657-353976:-1:exon
so has part: feature:351315-352833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353657-353976:-1:exon

position:353657:-1
position: 353657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351315-352833:-1:exon

position:352833:-1
position: 352833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAMK2N1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CAMK2N1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase II inhibitor 1
translation: MSEGPPYGEGQLAGDAAVGQLPFPVRLRGGDGLLAGGQGKRPPKLGQIGRSKRVVIEDDRIDDVLQNLSEKAPPGV
SIO_010081: CAMK2N1
subclass of: SO_0000673
so part of: CAMK2N1
location: complement(join(352763..352833,353657..353816))
location: region:352763-353816:-1
so has part: feature:353657-353816:-1:exon
so has part: feature:352763-352833:-1:exon

XP_039420034.1
type: Protein
SIO_000068: ncbiprotein

position:352763:-1
position: 352763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353816:-1
position: 353816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353657-353816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352763-352833:-1:exon

MUL1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MUL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(356211..359223)
location: region:356211-359223:-1
so has part: feature:356211-359223:-1:exon
subclass of: SO_0000010

104697579
type: Gene
SIO_000068: ncbigene

position:356211:-1
position: 356211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359223:-1
position: 359223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356211-359223:-1:exon

MUL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MUL1
product: mitochondrial E3 ubiquitin protein ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039564070.1
SIO_010081: MUL1
subclass of: SO_0000673
so part of: MUL1
location: complement(join(356211..357553,358242..358362,358880..358967,359067..359223))
location: region:356211-359223:-1
so has part: feature:359067-359223:-1:exon
so has part: feature:358880-358967:-1:exon
so has part: feature:358242-358362:-1:exon
so has part: feature:356211-357553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359067-359223:-1:exon

position:359067:-1
position: 359067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358880-358967:-1:exon

position:358880:-1
position: 358880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358967:-1
position: 358967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358242-358362:-1:exon

position:358242:-1
position: 358242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358362:-1
position: 358362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356211-357553:-1:exon

position:357553:-1
position: 357553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MUL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MUL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ubiquitin ligase activator of NFKB 1
translation: MEGGGRPSAAQAVLLAASTAITALLYSVYRQKARVARGLEGARKVRLDGDLRAVLLEAPGRCVPYAVIEGVVRSVKETLSSQFVENCKGVVQRLTLQEHKMVWNRTTHLWNDYEKIIHQRTNTTPFDLVPAEGGAGVTVRVMKPLDAAELSLETVYEKFHPSVQSFTDVIGHYISGERPKGIQETEQMLKVGTALTGVGELVLDNATIKLQPPKQGMPYYLSALDFESLLQKQESSVRFWKILTVVFGFATCAVLFFLLRKQYRHHREKQHLRQMQEEFRQAQERLTNAEGGETLKNACVVCLSSTKSCVFLECGHVCSCHKCYQALPEPKKCPICRQGITRVVPLYNS
SIO_010081: MUL1
subclass of: SO_0000673
so part of: MUL1
location: complement(join(356833..357553,358242..358362,358880..358967,359067..359186))
location: region:356833-359186:-1
so has part: feature:359067-359186:-1:exon
so has part: feature:358880-358967:-1:exon
so has part: feature:358242-358362:-1:exon
so has part: feature:356833-357553:-1:exon

XP_039420004.1
type: Protein
SIO_000068: ncbiprotein

position:356833:-1
position: 356833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359186:-1
position: 359186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359067-359186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358880-358967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358242-358362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356833-357553:-1:exon

FAM43B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FAM43B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(360433..362067)
location: region:360433-362067:-1
so has part: feature:360433-362067:-1:exon
subclass of: SO_0000010

120411111
type: Gene
SIO_000068: ncbigene

position:360433:-1
position: 360433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362067:-1
position: 362067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360433-362067:-1:exon

FAM43B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FAM43B
product: family with sequence similarity 43 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564071.1
SIO_010081: FAM43B
subclass of: SO_0000673
so part of: FAM43B
location: complement(360433..362067)
location: region:360433-362067:-1
so has part: feature:360433-362067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360433-362067:-1:exon

FAM43B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FAM43B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM43B
translation: MLPWRRSKFVLVENERKCKGKSLGPGLSYAALLAGFLRSCPDLLPECPLERLGSVFRGKRQKVELNKEDPTYTVRYLGNAVTLHAKGEGCTEEAVGKIWAKSEAGAGGAKMKLTLGPHGIRMTPCEKGARRPGHAYLLHRITYCAADRRHPKVFAWVYRHQVKNKAVVLRCHAVLVSKADKARAMALLLYQTSASAFNEFKRLKRQSDFRHVQQQLLGDAIVPLVPLRRLLNAKCPYRPPAERARCAPRLSSILEEEEEEAFGAGTPLGTLSERPCCGWPAT
SIO_010081: FAM43B
subclass of: SO_0000673
so part of: FAM43B
location: complement(360703..361551)
location: region:360703-361551:-1
so has part: feature:360703-361551:-1:exon

XP_039420005.1
type: Protein
SIO_000068: ncbiprotein

position:360703:-1
position: 360703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361551:-1
position: 361551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360703-361551:-1:exon

CDA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363985..366616
location: region:363985-366616:1
so has part: feature:363985-366616:1:exon
subclass of: SO_0000010

104697578
type: Gene
SIO_000068: ncbigene

position:363985:1
position: 363985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366616:1
position: 366616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363985-366616:1:exon

CDA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CDA
product: cytidine deaminase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010412509.3
SIO_010081: CDA
subclass of: SO_0000673
so part of: CDA
location: join(363985..364469,364747..364858,365120..365177,365862..366616)
location: region:363985-366616:1
so has part: feature:363985-364469:1:exon
so has part: feature:364747-364858:1:exon
so has part: feature:365120-365177:1:exon
so has part: feature:365862-366616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363985-364469:1:exon

position:364469:1
position: 364469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364747-364858:1:exon

position:364747:1
position: 364747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364858:1
position: 364858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365120-365177:1:exon

position:365120:1
position: 365120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365177:1
position: 365177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365862-366616:1:exon

position:365862:1
position: 365862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytidine deaminase
translation: MEGGGQHPVAAVPPGQPQGDHLQLLLRRSREAKNCAYCPYSRFPVGAALLTAGGEIFSGCNVENACYSLGVCAERTAIQKAISEGHTSFKAMAIASDMGDHFITPCGACRQVMREFGTDWDVYLTKADGTYIVKRLEELLPLSFGPEDLKKV
SIO_010081: CDA
subclass of: SO_0000673
so part of: CDA
location: join(364295..364469,364747..364858,365120..365177,365862..365975)
location: region:364295-365975:1
so has part: feature:364295-364469:1:exon
so has part: feature:364747-364858:1:exon
so has part: feature:365120-365177:1:exon
so has part: feature:365862-365975:1:exon

XP_010410811.2
type: Protein
SIO_000068: ncbiprotein

position:364295:1
position: 364295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365975:1
position: 365975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364295-364469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364747-364858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365120-365177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365862-365975:1:exon

PINK1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PINK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 368384..378058
location: region:368384-378058:1
so has part: feature:368384-378058:1:exon
subclass of: SO_0000010

104697553
type: Gene
SIO_000068: ncbigene

position:368384:1
position: 368384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378058:1
position: 378058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368384-378058:1:exon

PINK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PINK1
product: PTEN induced kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563882.1
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: join(368384..368734,370716..371015,371949..372052,373702..373884,374255..374418,375399..375526,376278..376514,376890..378058)
location: region:368384-378058:1
so has part: feature:368384-368734:1:exon
so has part: feature:370716-371015:1:exon
so has part: feature:371949-372052:1:exon
so has part: feature:373702-373884:1:exon
so has part: feature:374255-374418:1:exon
so has part: feature:375399-375526:1:exon
so has part: feature:376278-376514:1:exon
so has part: feature:376890-378058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368384-368734:1:exon

position:368734:1
position: 368734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370716-371015:1:exon

position:370716:1
position: 370716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371015:1
position: 371015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371949-372052:1:exon

position:371949:1
position: 371949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372052:1
position: 372052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373702-373884:1:exon

position:373702:1
position: 373702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373884:1
position: 373884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374255-374418:1:exon

position:374255:1
position: 374255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374418:1
position: 374418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:375399-375526:1:exon

position:375399:1
position: 375399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375526:1
position: 375526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:376278-376514:1:exon

position:376278:1
position: 376278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376514:1
position: 376514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376890-378058:1:exon

position:376890:1
position: 376890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PINK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PINK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PINK1, mitochondrial
translation: MALRLLLARALRLFPRCRPPCAPRAAPRPGPGPGPAPGPGPAPAAPPAPWRPWLAWLPAARRLFLRGPAGGLAAVARRGRGGVCLALAMALGLVEPRLEEQRRAEAACRHIQTVFVGKNKPQKDPLSSFRWQGFKLEEYLIGQPIGKGCSAAVYEAAIPFCPNPRDRAESSRLPAVQQDRGSASQGAEEEPVVERQPKGAFPLAIKMMWNISAGSSSEAILDAMGRELVPATGVALSGEYGAVSGRRKPVLGRKTLQPHPNIIQVIRAFTSSVPLLPGAFAEYPDVLPLSLNPRGIGHSRTLFLVMKNYPCTLRQYLRENTPDVRLSTVMILQLLEGVDHLVRQGIAHRDLKSDNILVEFDSAGCPWLVITDFGCCLADENIGLRLPFTSSYVDRGGNGCLMAPEVITASPGPGTVINYSKADAWAVGAIAYEILGLANPFYGHGHSTLESRSYQEDQLPSLPDHVPLEVKQVIKMLLQRDPNKRLSARVAANVLHLSLWGDSVVASRTLKPDQMIAWLLCQSAATLLTNRLAEKSQVETKMKMCFLANLEFEDLWAAIFLLLAWRSHSG
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: join(368399..368734,370716..371015,371949..372052,373702..373884,374255..374418,375399..375526,376278..376514,376890..377150)
location: region:368399-377150:1
so has part: feature:368399-368734:1:exon
so has part: feature:370716-371015:1:exon
so has part: feature:371949-372052:1:exon
so has part: feature:373702-373884:1:exon
so has part: feature:374255-374418:1:exon
so has part: feature:375399-375526:1:exon
so has part: feature:376278-376514:1:exon
so has part: feature:376890-377150:1:exon

XP_039419816.1
type: Protein
SIO_000068: ncbiprotein

position:368399:1
position: 368399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377150:1
position: 377150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368399-368734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370716-371015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371949-372052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373702-373884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374255-374418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375399-375526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376278-376514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376890-377150:1:exon

AGMAT
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AGMAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 378156..382390
location: region:378156-382390:1
so has part: feature:378156-382390:1:exon
subclass of: SO_0000010

104697552
type: Gene
SIO_000068: ncbigene

position:378156:1
position: 378156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382390:1
position: 382390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378156-382390:1:exon

AGMAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AGMAT
product: agmatinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039563884.1
SIO_010081: AGMAT
subclass of: SO_0000673
so part of: AGMAT
location: join(378156..379774,379886..380088,380835..380883,381011..381206,381544..381723,381984..382068,382179..382390)
location: region:378156-382390:1
so has part: feature:378156-379774:1:exon
so has part: feature:379886-380088:1:exon
so has part: feature:380835-380883:1:exon
so has part: feature:381011-381206:1:exon
so has part: feature:381544-381723:1:exon
so has part: feature:381984-382068:1:exon
so has part: feature:382179-382390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378156-379774:1:exon

position:379774:1
position: 379774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379886-380088:1:exon

position:379886:1
position: 379886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380088:1
position: 380088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380835-380883:1:exon

position:380835:1
position: 380835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380883:1
position: 380883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381011-381206:1:exon

position:381011:1
position: 381011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381206:1
position: 381206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:381544-381723:1:exon

position:381544:1
position: 381544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381723:1
position: 381723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:381984-382068:1:exon

position:381984:1
position: 381984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382068:1
position: 382068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382179-382390:1:exon

position:382179:1
position: 382179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGMAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AGMAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agmatinase, mitochondrial
translation: MRPLLWAACSQLLPQGAGLCAPKPALTTLVTTLVTTSHHSLRPPAPLATSSSSLSAFAAFLRPLVPGSRAPTRWSSRFNVPPSALLVARPVGVCSMMRLPLQASAEGLDAAFVGVPLDTGTSNRPGARFGPRQIRAESAMVRRCNGSTGAAPFDSLRVADIGDVNVNLYNLPDSCRLIRESYQGIVASGCVPLTLGGDHTITYPILQALAAKHGPVGLVHVDAHTDTGDTALGEKIYHGSTFRRCVEEGLLDCGRVVQIGIRGSSYDPDPNKYCREQGFRVVPAEECWMKSLEPLMREVRAQMGDKPMYISFDIDGLDPAYAPGTGTPEIAGLTPAQALEIIRGCRGLNIVGCDLVEVAPMYDASGNTALLGANLLFEMLCVLPGVKML
SIO_010081: AGMAT
subclass of: SO_0000673
so part of: AGMAT
location: join(379392..379774,379886..380088,380835..380883,381011..381206,381544..381723,381984..382068,382179..382252)
location: region:379392-382252:1
so has part: feature:379392-379774:1:exon
so has part: feature:379886-380088:1:exon
so has part: feature:380835-380883:1:exon
so has part: feature:381011-381206:1:exon
so has part: feature:381544-381723:1:exon
so has part: feature:381984-382068:1:exon
so has part: feature:382179-382252:1:exon

XP_039419818.1
type: Protein
SIO_000068: ncbiprotein

position:379392:1
position: 379392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382252:1
position: 382252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379392-379774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379886-380088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380835-380883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381011-381206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:381544-381723:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381984-382068:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382179-382252:1:exon

DNAJC16
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DNAJC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(384999..394394)
location: region:384999-394394:-1
so has part: feature:384999-394394:-1:exon
subclass of: SO_0000010

104697577
type: Gene
SIO_000068: ncbigene

position:384999:-1
position: 384999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394394:-1
position: 394394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384999-394394:-1:exon

DNAJC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DNAJC16
product: DnaJ heat shock protein family (Hsp40) member C16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563881.1
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: complement(join(384999..386230,386640..386810,387251..387349,387436..387516,387756..387832,388053..388235,388409..388592,388826..388956,389311..389469,390063..390167,391321..391505,391752..392082,392955..393021,394208..394394))
location: region:384999-394394:-1
so has part: feature:394208-394394:-1:exon
so has part: feature:392955-393021:-1:exon
so has part: feature:391752-392082:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:390063-390167:-1:exon
so has part: feature:389311-389469:-1:exon
so has part: feature:388826-388956:-1:exon
so has part: feature:388409-388592:-1:exon
so has part: feature:388053-388235:-1:exon
so has part: feature:387756-387832:-1:exon
so has part: feature:387436-387516:-1:exon
so has part: feature:387251-387349:-1:exon
so has part: feature:386640-386810:-1:exon
so has part: feature:384999-386230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394208-394394:-1:exon

position:394208:-1
position: 394208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:392955-393021:-1:exon

position:392955:-1
position: 392955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393021:-1
position: 393021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391752-392082:-1:exon

position:391752:-1
position: 391752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392082:-1
position: 392082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391321-391505:-1:exon

position:391321:-1
position: 391321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391505:-1
position: 391505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390063-390167:-1:exon

position:390063:-1
position: 390063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390167:-1
position: 390167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:389311-389469:-1:exon

position:389311:-1
position: 389311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389469:-1
position: 389469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388826-388956:-1:exon

position:388826:-1
position: 388826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388956:-1
position: 388956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388409-388592:-1:exon

position:388409:-1
position: 388409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388592:-1
position: 388592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388053-388235:-1:exon

position:388053:-1
position: 388053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388235:-1
position: 388235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:387756-387832:-1:exon

position:387756:-1
position: 387756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387832:-1
position: 387832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:387436-387516:-1:exon

position:387436:-1
position: 387436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387516:-1
position: 387516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:387251-387349:-1:exon

position:387251:-1
position: 387251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387349:-1
position: 387349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:386640-386810:-1:exon

position:386640:-1
position: 386640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386810:-1
position: 386810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:384999-386230:-1:exon

position:386230:-1
position: 386230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DNAJC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 16
translation: MEPGRAGRLLLLLLLPALGAAALGEFDPYRVLGVGRSSSQADIKKAYKRLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFDRYGDAGESQGFAQQHHRQFHRFHDGFYFDESFFHFPFNSERRDTSDEKYLLHFSHYINEIVPDSFKKPYLIKITSDWCFSCIHIEPVWKEVAQELEALGAGIGVVHAGYERRLAHHLGAHSTPTLLGLINGKITFFHNAVVRENLRQFVENLLPGNLVEKITDKNYIHFLSDWKKDNKPHVLLFDHMPVVPLLYKLTAFAYRDYLSFGYVYVGLRGTEELSSQYNINVYTPTMMIFKEHIDRPADVVQAREMKKQLIDDFLSQNKFLMVARLTNQRLFQELCPVKKSHRQRKHCVVLLTGEGEKFAEAYEAFLTFAVANTKDTLRFVHIYSDRQPEFAEALLMDEEKYRGRSAVVILERRNNAGKIAYKALEEAWQGSKEDNFILLDLLDQLRTDPGLLSWETVVADLNDELAPMFLVRWFYSTLDYISDCWDSLFHSNWREMMPLLSLLFSALFILFGTVIVQAFSDSSDTRDSPPSGKEETTAKMEKNDASFSKESNSRIPKKGFVEVTELTDINYTSNLVRLRPGHMNVVLILSNSTKTPLLQKFALEVYTFTGSSSLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFLERDYTGYVLALNGHKKYFCLFKPHRSGDEGGTLGLCEDYDALQHTEARGKPSCSPGSRSIKNKLHKLSFWMERLLEGSLQRFYIPSWPALD
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: complement(join(385834..386230,386640..386810,387251..387349,387436..387516,387756..387832,388053..388235,388409..388592,388826..388956,389311..389469,390063..390167,391321..391505,391752..392082,392955..393021,394208..394368))
location: region:385834-394368:-1
so has part: feature:394208-394368:-1:exon
so has part: feature:392955-393021:-1:exon
so has part: feature:391752-392082:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:390063-390167:-1:exon
so has part: feature:389311-389469:-1:exon
so has part: feature:388826-388956:-1:exon
so has part: feature:388409-388592:-1:exon
so has part: feature:388053-388235:-1:exon
so has part: feature:387756-387832:-1:exon
so has part: feature:387436-387516:-1:exon
so has part: feature:387251-387349:-1:exon
so has part: feature:386640-386810:-1:exon
so has part: feature:385834-386230:-1:exon

XP_039419815.1
type: Protein
SIO_000068: ncbiprotein

position:385834:-1
position: 385834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394368:-1
position: 394368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394208-394368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:392955-393021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391752-392082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390063-390167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389311-389469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388826-388956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388409-388592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388053-388235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387756-387832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:387436-387516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387251-387349:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386640-386810:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:385834-386230:-1:exon

CASP9
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396565..405762
location: region:396565-405762:1
so has part: feature:396565-405762:1:exon
subclass of: SO_0000010

104697549
type: Gene
SIO_000068: ncbigene

position:396565:1
position: 396565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405762:1
position: 405762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396565-405762:1:exon

CASP9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: CASP9
product: caspase 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005603526.1
SIO_010081: CASP9
so part of: CASP9
location: join(396565..397363,398286..398505,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,404153..404297,405561..405762)
location: region:396565-405762:1
so has part: feature:396565-397363:1:exon
so has part: feature:398286-398505:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:404153-404297:1:exon
so has part: feature:405561-405762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396565-397363:1:exon

position:397363:1
position: 397363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398505:1:exon

position:398286:1
position: 398286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398505:1
position: 398505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

position:398871:1
position: 398871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398951:1
position: 398951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

position:399798:1
position: 399798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399829:1
position: 399829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

position:400368:1
position: 400368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400544:1
position: 400544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

position:401232:1
position: 401232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401321:1
position: 401321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

position:401986:1
position: 401986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402133:1
position: 402133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

position:402490:1
position: 402490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402669:1
position: 402669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

position:402848:1
position: 402848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402957:1
position: 402957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:404153-404297:1:exon

position:404153:1
position: 404153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404297:1
position: 404297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:405561-405762:1:exon

position:405561:1
position: 405561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASP9
product: caspase 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_039564063.1
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(396565..397363,398286..398505,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,404153..405681)
location: region:396565-405681:1
so has part: feature:396565-397363:1:exon
so has part: feature:398286-398505:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:404153-405681:1:exon

position:405681:1
position: 405681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396565-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:404153-405681:1:exon

CASP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASP9
product: caspase 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039564062.1
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(396568..397363,398286..398499,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,403583..404103)
location: region:396568-404103:1
so has part: feature:396568-397363:1:exon
so has part: feature:398286-398499:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:403583-404103:1:exon

position:396568:1
position: 396568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404103:1
position: 404103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396568-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398499:1:exon

position:398499:1
position: 398499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403583-404103:1:exon

position:403583:1
position: 403583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASP9
product: caspase 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039564061.1
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(396569..397363,398286..398505,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,403583..404103)
location: region:396569-404103:1
so has part: feature:396569-397363:1:exon
so has part: feature:398286-398505:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:403583-404103:1:exon

position:396569:1
position: 396569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396569-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403583-404103:1:exon

CASP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-9 isoform X3
translation: MEEQQRRALRRGRARLVAALRVEPLWDPLEQRGLFTRPMLEELQSAGSRGEQARQLIIDLETRGKQAFPAFLSILRDTGQGDLAEMLIQECESRPVLPQLPDLRPVELELREEKQRKNVTPHEHLSISVQAESERPRIPPVPARGSAVDKRSRDLVYEMKTDPCGHCLILNNVNFSRDSGLSTREGSDIDCEKLERRFKALHFTVLTRRDLKAQEIVLELQKLSRQDHSALDCCIVVILSHGCQTSHIQFPGGIYGTDGKPIPIEKIVNYFNGSNSPSLRGKPKLFFIQACGGEQRDQGFVVDCDSPEEEAPGGSLESDATPFRVPSDNVDEPDAIACLPTPSDILVSYSTFPGFVSWREKSSGSWYVEMLDSVLEQYAHSEDLLGMLVRCLLKAPLKWEE
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(397232..397363,398286..398505,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,404153..404188)
location: region:397232-404188:1
so has part: feature:397232-397363:1:exon
so has part: feature:398286-398505:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:404153-404188:1:exon

XP_039419997.1
type: Protein
SIO_000068: ncbiprotein

position:397232:1
position: 397232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404188:1
position: 404188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397232-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:404153-404188:1:exon

CASP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-9 isoform X1
translation: MEEQQRRALRRGRARLVAALRVEPLWDPLEQRGLFTRPMLEELQSAGSRGEQARQLIIDLETRGKQAFPAFLSILRDTGQGDLAEMLIQECESRPVLPQLPDLRPVELELREEKQRKNVTPHEHLSISVQAESERPRIPPVPARGSAVDKRSRDLVYEMKTDPCGHCLILNNVNFSRDSGLSTREGSDIDCEKLERRFKALHFTVLTRRDLKAQEIVLELQKLSRQDHSALDCCIVVILSHGCQTSHIQFPGGIYGTDGKPIPIEKIVNYFNGSNSPSLRGKPKLFFIQACGGEQRDQGFVVDCDSPEEEAPGGSLESDATPFRVPSDNVDEPDAIACLPTPSDILVSYSTFPGFVSWREKSSGSWYVEMLDSVLEQYAHSEDLLGMLVRVAGAVSAKGRYKQMPGCFNFLRKKFFFACD
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(397232..397363,398286..398505,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,403583..403675)
location: region:397232-403675:1
so has part: feature:397232-397363:1:exon
so has part: feature:398286-398505:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:403583-403675:1:exon

XP_039419995.1
type: Protein
SIO_000068: ncbiprotein

position:403675:1
position: 403675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397232-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403583-403675:1:exon

CASP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-9 isoform X2
translation: MEEQQRRALRRGRARLVAALRVEPLWDPLEQRGLFTRPMLEELQSAGSRGEQARQLIIDLETRGKQAFPAFLSILRDTGQGDLAEMLIQECESRPVLPQLPDLRPVELELREEKQHVTPHEHLSISVQAESERPRIPPVPARGSAVDKRSRDLVYEMKTDPCGHCLILNNVNFSRDSGLSTREGSDIDCEKLERRFKALHFTVLTRRDLKAQEIVLELQKLSRQDHSALDCCIVVILSHGCQTSHIQFPGGIYGTDGKPIPIEKIVNYFNGSNSPSLRGKPKLFFIQACGGEQRDQGFVVDCDSPEEEAPGGSLESDATPFRVPSDNVDEPDAIACLPTPSDILVSYSTFPGFVSWREKSSGSWYVEMLDSVLEQYAHSEDLLGMLVRVAGAVSAKGRYKQMPGCFNFLRKKFFFACD
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: join(397232..397363,398286..398499,398871..398951,399798..399829,400368..400544,401232..401321,401986..402133,402490..402669,402848..402957,403583..403675)
location: region:397232-403675:1
so has part: feature:397232-397363:1:exon
so has part: feature:398286-398499:1:exon
so has part: feature:398871-398951:1:exon
so has part: feature:399798-399829:1:exon
so has part: feature:400368-400544:1:exon
so has part: feature:401232-401321:1:exon
so has part: feature:401986-402133:1:exon
so has part: feature:402490-402669:1:exon
so has part: feature:402848-402957:1:exon
so has part: feature:403583-403675:1:exon

XP_039419996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397232-397363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398286-398499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398871-398951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399798-399829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400368-400544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401232-401321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402490-402669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402848-402957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403583-403675:1:exon

LOC120411109
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(405506..407419)
location: region:405506-407419:-1
so has part: feature:405506-407419:-1:exon
subclass of: SO_0000010

120411109
type: Gene
SIO_000068: ncbigene

position:405506:-1
position: 405506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407419:-1
position: 407419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405506-407419:-1:exon

LOC120411109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411109
product: chymotrypsin-C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564064.1
SIO_010081: LOC120411109
subclass of: SO_0000673
so part of: LOC120411109
location: complement(join(405506..405574,405675..405827,406025..406170,406258..406394,406477..406602,406687..406784,406862..406953,407070..407419))
location: region:405506-407419:-1
so has part: feature:407070-407419:-1:exon
so has part: feature:406862-406953:-1:exon
so has part: feature:406687-406784:-1:exon
so has part: feature:406477-406602:-1:exon
so has part: feature:406258-406394:-1:exon
so has part: feature:406025-406170:-1:exon
so has part: feature:405675-405827:-1:exon
so has part: feature:405506-405574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407070-407419:-1:exon

position:407070:-1
position: 407070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406862-406953:-1:exon

position:406862:-1
position: 406862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406953:-1
position: 406953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406687-406784:-1:exon

position:406687:-1
position: 406687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406784:-1
position: 406784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406477-406602:-1:exon

position:406477:-1
position: 406477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406602:-1
position: 406602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406258-406394:-1:exon

position:406258:-1
position: 406258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406394:-1
position: 406394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406025-406170:-1:exon

position:406025:-1
position: 406025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406170:-1
position: 406170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:405675-405827:-1:exon

position:405675:-1
position: 405675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405827:-1
position: 405827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:405506-405574:-1:exon

position:405574:-1
position: 405574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120411109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chymotrypsin-C-like
translation: MASWVGGCPPAVPQEVFQEQGQVSLPCPSMVPAHNGQMWPFPGGTLSAIRWGNEELRSPCAPSVGQSPHVSGRRGHSKVPGSPDTIRGVSSPTAAPLVSTTMLGAVCLVVLLGYAYGCGQPAVPPQLGARVVGGEDAVAHSWPWQISLQYSRYGSWYHTCGGTLIAPQWVLTAAHCISSSLTYRVVLGKQDLSENDEPGSVAVGVEKMIVHEKWNSFLIINDIALIKLAEEVQESDTIRAACLPDAGKILPNDYPCYVTGWGRIRTNGPLADVLQQALLPVVDYETCSQRDWWGSNVRTTMVCAGGDGVVSGCNGDSGGPLNCQRDDGIWEVEGIVSFGSGLSCNMIRKPTVFTRVSAFIDWINEKMSAN
SIO_010081: LOC120411109
subclass of: SO_0000673
so part of: LOC120411109
location: complement(join(405557..405574,405675..405827,406025..406170,406258..406394,406477..406602,406687..406784,406862..406953,407070..407412))
location: region:405557-407412:-1
so has part: feature:407070-407412:-1:exon
so has part: feature:406862-406953:-1:exon
so has part: feature:406687-406784:-1:exon
so has part: feature:406477-406602:-1:exon
so has part: feature:406258-406394:-1:exon
so has part: feature:406025-406170:-1:exon
so has part: feature:405675-405827:-1:exon
so has part: feature:405557-405574:-1:exon

XP_039419998.1
type: Protein
SIO_000068: ncbiprotein

position:405557:-1
position: 405557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407412:-1
position: 407412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407070-407412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406862-406953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406687-406784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406477-406602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406258-406394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406025-406170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405675-405827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405557-405574:-1:exon

LOC104697550
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104697550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(417922..420084)
location: region:417922-420084:-1
so has part: feature:417922-420084:-1:exon
subclass of: SO_0000010

104697550
type: Gene
SIO_000068: ncbigene

position:417922:-1
position: 417922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420084:-1
position: 420084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417922-420084:-1:exon

LOC104697550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104697550
product: chymotrypsin-C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039564132.1
SIO_010081: LOC104697550
subclass of: SO_0000673
so part of: LOC104697550
location: complement(join(417922..417993,418083..418235,418388..418533,418621..418757,418840..418965,419050..419147,419225..419316,419433..420084))
location: region:417922-420084:-1
so has part: feature:419433-420084:-1:exon
so has part: feature:419225-419316:-1:exon
so has part: feature:419050-419147:-1:exon
so has part: feature:418840-418965:-1:exon
so has part: feature:418621-418757:-1:exon
so has part: feature:418388-418533:-1:exon
so has part: feature:418083-418235:-1:exon
so has part: feature:417922-417993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:419433-420084:-1:exon

position:419433:-1
position: 419433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419225-419316:-1:exon

position:419225:-1
position: 419225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419316:-1
position: 419316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419050-419147:-1:exon

position:419050:-1
position: 419050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419147:-1
position: 419147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:418840-418965:-1:exon

position:418840:-1
position: 418840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418965:-1
position: 418965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418621-418757:-1:exon

position:418621:-1
position: 418621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418757:-1
position: 418757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418388-418533:-1:exon

position:418388:-1
position: 418388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418533:-1
position: 418533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:418083-418235:-1:exon

position:418083:-1
position: 418083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418235:-1
position: 418235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417922-417993:-1:exon

position:417993:-1
position: 417993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104697550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104697550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chymotrypsin-C-like
translation: MASWVGGCPPALRQEGPCPFPEQGQVSPPCPSMVPAHNGQMWPFPGGTLSAIRWGNEELRSPCAPSVGQSPHVSGRRGHSKVPGSPDTIREVSSPTAAPLVSTTMLGAVCLVVLLGYAYGCGQPAVPPQLGARVVGGEDAVAHSWPWQISLQYSRYGSWYHTCGGTLIAPQWVLTAAHCISSSLTYRVVLGKQDLSENDEPGSVAVGVEKMIVHEKWNSFLIINDIALIKLAEEVQESDTIRAACLPDAGKILPNDYPCYVTGWGRIRTNGPLADVLQQALLPVVDYETCSQRDWWGSNVRTTMVCAGGDGVVSGCNGDSGGPLNCQRDDGIWEVEGIVSFGSGLSCNMIRKPTVFTRVSAFIDWINEKMSAN
SIO_010081: LOC104697550
subclass of: SO_0000673
so part of: LOC104697550
location: complement(join(417976..417993,418083..418235,418388..418533,418621..418757,418840..418965,419050..419147,419225..419316,419433..419784))
location: region:417976-419784:-1
so has part: feature:419433-419784:-1:exon
so has part: feature:419225-419316:-1:exon
so has part: feature:419050-419147:-1:exon
so has part: feature:418840-418965:-1:exon
so has part: feature:418621-418757:-1:exon
so has part: feature:418388-418533:-1:exon
so has part: feature:418083-418235:-1:exon
so has part: feature:417976-417993:-1:exon

XP_039420066.1
type: Protein
SIO_000068: ncbiprotein

position:417976:-1
position: 417976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419784:-1
position: 419784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419433-419784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419225-419316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419050-419147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418840-418965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418621-418757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418388-418533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418083-418235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417976-417993:-1:exon

EFHD2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EFHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420176..424990)
location: region:420176-424990:-1
so has part: feature:420176-424990:-1:exon
subclass of: SO_0000010

120411117
type: Gene
SIO_000068: ncbigene

position:420176:-1
position: 420176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424990:-1
position: 424990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420176-424990:-1:exon

EFHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EFHD2
product: EF-hand domain family member D2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_039564095.1
SIO_010081: EFHD2
subclass of: SO_0000673
so part of: EFHD2
location: complement(join(420176..421156,421295..421429,421568..421715,424778..424990))
location: region:420176-424990:-1
so has part: feature:424778-424990:-1:exon
so has part: feature:421568-421715:-1:exon
so has part: feature:421295-421429:-1:exon
so has part: feature:420176-421156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424778-424990:-1:exon

position:424778:-1
position: 424778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421568-421715:-1:exon

position:421568:-1
position: 421568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421715:-1
position: 421715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421295-421429:-1:exon

position:421295:-1
position: 421295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421429:-1
position: 421429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420176-421156:-1:exon

position:421156:-1
position: 421156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EFHD2
product: EF-hand domain family member D2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039564096.1
SIO_010081: EFHD2
subclass of: SO_0000673
so part of: EFHD2
location: complement(join(420176..421156,421295..421429,421568..421715,423881..423900))
location: region:420176-423900:-1
so has part: feature:423881-423900:-1:exon
so has part: feature:421568-421715:-1:exon
so has part: feature:421295-421429:-1:exon
so has part: feature:420176-421156:-1:exon

position:423900:-1
position: 423900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423881-423900:-1:exon

position:423881:-1
position: 423881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421568-421715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421295-421429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420176-421156:-1:exon

EFHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EFHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X1
translation: MAAAAEEPEGRRGRGPRPGPAPGSPAGRAVGEGSPGGGGRRVFSPAGEFREFSRRQLRDMERLFRQYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKAQAINEASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFTQ
SIO_010081: EFHD2
subclass of: SO_0000673
so part of: EFHD2
location: complement(join(421022..421156,421295..421429,421568..421715,424778..424974))
location: region:421022-424974:-1
so has part: feature:424778-424974:-1:exon
so has part: feature:421568-421715:-1:exon
so has part: feature:421295-421429:-1:exon
so has part: feature:421022-421156:-1:exon

XP_039420029.1
type: Protein
SIO_000068: ncbiprotein

position:421022:-1
position: 421022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424974:-1
position: 424974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424778-424974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421568-421715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421295-421429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421022-421156:-1:exon

EFHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EFHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X2
translation: MWYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKAQAINEASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFTQ
SIO_010081: EFHD2
subclass of: SO_0000673
so part of: EFHD2
location: complement(join(421022..421156,421295..421429,421568..421715,423881..423885))
location: region:421022-423885:-1
so has part: feature:423881-423885:-1:exon
so has part: feature:421568-421715:-1:exon
so has part: feature:421295-421429:-1:exon
so has part: feature:421022-421156:-1:exon

XP_039420030.1
type: Protein
SIO_000068: ncbiprotein

position:423885:-1
position: 423885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423881-423885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421568-421715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421295-421429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421022-421156:-1:exon

FHAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FHAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426348..444724)
location: region:426348-444724:-1
so has part: feature:426348-444724:-1:exon
subclass of: SO_0000010

104697551
type: Gene
SIO_000068: ncbigene

position:426348:-1
position: 426348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444724:-1
position: 444724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426348-444724:-1:exon

FHAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FHAD1
product: forkhead associated phosphopeptide binding domain 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010412479.4
SIO_010081: FHAD1
subclass of: SO_0000673
so part of: FHAD1
location: complement(join(426348..426729,426996..427161,427573..427793,428397..428492,428843..428970,429251..429386,430641..430749,431075..431234,431893..432008,432402..432483,432948..433173,433358..433447,433643..433750,434575..434712,434998..435068,435396..435591,435931..436083,436430..436513,436923..437030,437440..437532,437941..438006,439433..439563,439946..440069,440571..440796,441040..441131,442191..442455,443956..444162,444368..444724))
location: region:426348-444724:-1
so has part: feature:444368-444724:-1:exon
so has part: feature:443956-444162:-1:exon
so has part: feature:442191-442455:-1:exon
so has part: feature:441040-441131:-1:exon
so has part: feature:440571-440796:-1:exon
so has part: feature:439946-440069:-1:exon
so has part: feature:439433-439563:-1:exon
so has part: feature:437941-438006:-1:exon
so has part: feature:437440-437532:-1:exon
so has part: feature:436923-437030:-1:exon
so has part: feature:436430-436513:-1:exon
so has part: feature:435931-436083:-1:exon
so has part: feature:435396-435591:-1:exon
so has part: feature:434998-435068:-1:exon
so has part: feature:434575-434712:-1:exon
so has part: feature:433643-433750:-1:exon
so has part: feature:433358-433447:-1:exon
so has part: feature:432948-433173:-1:exon
so has part: feature:432402-432483:-1:exon
so has part: feature:431893-432008:-1:exon
so has part: feature:431075-431234:-1:exon
so has part: feature:430641-430749:-1:exon
so has part: feature:429251-429386:-1:exon
so has part: feature:428843-428970:-1:exon
so has part: feature:428397-428492:-1:exon
so has part: feature:427573-427793:-1:exon
so has part: feature:426996-427161:-1:exon
so has part: feature:426348-426729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444368-444724:-1:exon

position:444368:-1
position: 444368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443956-444162:-1:exon

position:443956:-1
position: 443956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444162:-1
position: 444162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442191-442455:-1:exon

position:442191:-1
position: 442191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442455:-1
position: 442455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:441040-441131:-1:exon

position:441040:-1
position: 441040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441131:-1
position: 441131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:440571-440796:-1:exon

position:440571:-1
position: 440571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440796:-1
position: 440796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439946-440069:-1:exon

position:439946:-1
position: 439946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440069:-1
position: 440069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:439433-439563:-1:exon

position:439433:-1
position: 439433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439563:-1
position: 439563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:437941-438006:-1:exon

position:437941:-1
position: 437941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438006:-1
position: 438006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:437440-437532:-1:exon

position:437440:-1
position: 437440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437532:-1
position: 437532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:436923-437030:-1:exon

position:436923:-1
position: 436923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437030:-1
position: 437030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:436430-436513:-1:exon

position:436430:-1
position: 436430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436513:-1
position: 436513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:435931-436083:-1:exon

position:435931:-1
position: 435931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436083:-1
position: 436083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:435396-435591:-1:exon

position:435396:-1
position: 435396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435591:-1
position: 435591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:434998-435068:-1:exon

position:434998:-1
position: 434998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435068:-1
position: 435068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:434575-434712:-1:exon

position:434575:-1
position: 434575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434712:-1
position: 434712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:433643-433750:-1:exon

position:433643:-1
position: 433643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433750:-1
position: 433750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:433358-433447:-1:exon

position:433358:-1
position: 433358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433447:-1
position: 433447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:432948-433173:-1:exon

position:432948:-1
position: 432948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433173:-1
position: 433173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:432402-432483:-1:exon

position:432402:-1
position: 432402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432483:-1
position: 432483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:431893-432008:-1:exon

position:431893:-1
position: 431893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432008:-1
position: 432008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:431075-431234:-1:exon

position:431075:-1
position: 431075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431234:-1
position: 431234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:430641-430749:-1:exon

position:430641:-1
position: 430641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430749:-1
position: 430749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:429251-429386:-1:exon

position:429251:-1
position: 429251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429386:-1
position: 429386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:428843-428970:-1:exon

position:428843:-1
position: 428843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428970:-1
position: 428970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:428397-428492:-1:exon

position:428397:-1
position: 428397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428492:-1
position: 428492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:427573-427793:-1:exon

position:427573:-1
position: 427573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427793:-1
position: 427793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:426996-427161:-1:exon

position:426996:-1
position: 426996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427161:-1
position: 427161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:426348-426729:-1:exon

position:426729:-1
position: 426729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FHAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FHAD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: forkhead-associated domain-containing protein 1
translation: MRAFLKGSEGCFQLKSYTTTIGSHRGADIVLQSAGVAECHAALEFSASDNSFVLQDFNSPHGTFVNSCQVQNAAVRVRPGDILSFGTAGASFELVLDGAAQMSCPPLKHRVGWTGQLQVVAEPKPTTPPSRLPSLQWQLPSDSPGSGAPRAPGQVPHLVLPRRPASARDRSTASAASLDTFSRTSAERPVSTSVSGNGASAVRGPPSLGTPEVDLLLREKGEKLLEKEMGHLSGLETESKGKNVVIRDLQEEIAAMAKKLAQAAVRNEVELTQKLLTFNQELGAQTEEIKALREQINDLQRGSSQVFSHSLRERDLEIGKLQRESEKLKRNQALTAGLVSSLQRELLQRDQKTQQLQQEIEKLKKENREKDNQLAVVSAKCSRIKEETKRELGEQELISCRKRIEELERDLEGLQGEIRKHESVQKQLAEKAKAEEELKAAWSQQAGQLREMGRRERLLRSDLQRAGEQLESFKTRVMQVCSPSAAGSTGESVTEQQVIEKVRQISDENQQSHEREKSLQKELSSRLAQEKEVSANIEVFKNSLQKLQACLRSPCSSASLRGELGKLEVLCLDPSVSAIRAAVVDMARGPLSWLEGVEQLLDSAGMDLSTSGKGLLAALGSLSEKSQEMAQRNQMLQEQLEKLQELQAELLQEHTKEVEAKHEQDLQIKIQQIILEKDKESKEILESAVTEEKDKCKKSVEEKQKKIQELESHLRSMAEATAKKAEEQELTEGKLGEALHELKEIAAREAVLQQQVLQQDEQLRAVQEENELQRQKLHEEVAGYREQSKQHSLTILALEDRLLEAAEQQKMLEEEKAALVGKMEGLQCDAHRSASGAWLGICPAMESHVCLRKLQEELAVAQGMLLEKKALISRLTRELSETKARMSDMRGELSEEQKVELEHSQRQLKHREWELNQLRGKLSEMSSLVEEKDQALKAAAEELSQAQTHCQVLRDASQQTVENPEDAPRTPVQAAEASQGEPPSDLAELGAKCRGLRHEETIQRQKEGLAELRERVKMLEKRQCSGAVKSYSEQLVARMKDLAEKIVQQRGLEMEPAPVLGEKLRAGKVPDHVPNGGLFRITNSTASLEMAEATVFGEKMYLDVIGALGSLMEMKELSGMQPLQHLPQEKRAEVGLQRQKALELLYKKIRNLQIRLERKEEMLKGCEGSVEQLRQNQASLRRCQEEMSSLEDEAHRVAEEKALLREALERTQLQLEQEKRLRRAAKRRKPGATKPLCSGKPKAKERVADAVKSGRS
SIO_010081: FHAD1
subclass of: SO_0000673
so part of: FHAD1
location: complement(join(426646..426729,426996..427161,427573..427793,428397..428492,428843..428970,429251..429386,430641..430749,431075..431234,431893..432008,432402..432483,432948..433173,433358..433447,433643..433750,434575..434712,434998..435068,435396..435591,435931..436083,436430..436513,436923..437030,437440..437532,437941..438006,439433..439563,439946..440069,440571..440796,441040..441131,442191..442455,443956..444162,444368..444463))
location: region:426646-444463:-1
so has part: feature:444368-444463:-1:exon
so has part: feature:443956-444162:-1:exon
so has part: feature:442191-442455:-1:exon
so has part: feature:441040-441131:-1:exon
so has part: feature:440571-440796:-1:exon
so has part: feature:439946-440069:-1:exon
so has part: feature:439433-439563:-1:exon
so has part: feature:437941-438006:-1:exon
so has part: feature:437440-437532:-1:exon
so has part: feature:436923-437030:-1:exon
so has part: feature:436430-436513:-1:exon
so has part: feature:435931-436083:-1:exon
so has part: feature:435396-435591:-1:exon
so has part: feature:434998-435068:-1:exon
so has part: feature:434575-434712:-1:exon
so has part: feature:433643-433750:-1:exon
so has part: feature:433358-433447:-1:exon
so has part: feature:432948-433173:-1:exon
so has part: feature:432402-432483:-1:exon
so has part: feature:431893-432008:-1:exon
so has part: feature:431075-431234:-1:exon
so has part: feature:430641-430749:-1:exon
so has part: feature:429251-429386:-1:exon
so has part: feature:428843-428970:-1:exon
so has part: feature:428397-428492:-1:exon
so has part: feature:427573-427793:-1:exon
so has part: feature:426996-427161:-1:exon
so has part: feature:426646-426729:-1:exon

XP_010410781.3
type: Protein
SIO_000068: ncbiprotein

position:426646:-1
position: 426646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444463:-1
position: 444463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444368-444463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443956-444162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442191-442455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441040-441131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:440571-440796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439946-440069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439433-439563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437941-438006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437440-437532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:436923-437030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:436430-436513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435931-436083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435396-435591:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:434998-435068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:434575-434712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:433643-433750:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:433358-433447:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:432948-433173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:432402-432483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:431893-432008:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:431075-431234:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:430641-430749:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:429251-429386:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:428843-428970:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:428397-428492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:427573-427793:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:426996-427161:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:426646-426729:-1:exon

LOC109146368
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452321..455010
location: region:452321-455010:1
so has part: feature:452321-455010:1:exon
subclass of: SO_0000011

109146368
type: Gene
SIO_000068: ncbigene

position:452321:1
position: 452321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455010:1
position: 455010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452321-455010:1:exon

LOC109146368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146368
product: uncharacterized LOC109146368
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_002048338.2
SIO_010081: LOC109146368
subclass of: SO_0000673
so part of: LOC109146368
location: join(452321..452695,453957..455010)
location: region:452321-455010:1
so has part: feature:452321-452695:1:exon
so has part: feature:453957-455010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452321-452695:1:exon

position:452695:1
position: 452695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453957-455010:1:exon

position:453957:1
position: 453957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LACTBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LACTBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(498733..516039)
location: region:498733-516039:-1
so has part: feature:498733-516039:-1:exon
subclass of: SO_0000010

104697548
type: Gene
SIO_000068: ncbigene

position:498733:-1
position: 498733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516039:-1
position: 516039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498733-516039:-1:exon

LACTBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LACTBL1
product: lactamase beta like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019293657.3
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(498733..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511992,515242..515329,515944..516039))
location: region:498733-516039:-1
so has part: feature:515944-516039:-1:exon
so has part: feature:515242-515329:-1:exon
so has part: feature:511851-511992:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:498733-500285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515944-516039:-1:exon

position:515944:-1
position: 515944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515242-515329:-1:exon

position:515242:-1
position: 515242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515329:-1
position: 515329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511851-511992:-1:exon

position:511851:-1
position: 511851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511992:-1
position: 511992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509445-509554:-1:exon

position:509445:-1
position: 509445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509554:-1
position: 509554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:506948-507105:-1:exon

position:506948:-1
position: 506948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507105:-1
position: 507105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:505319-505566:-1:exon

position:505319:-1
position: 505319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505566:-1
position: 505566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502121-502226:-1:exon

position:502121:-1
position: 502121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502226:-1
position: 502226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:498733-500285:-1:exon

position:500285:-1
position: 500285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LACTBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LACTBL1
product: lactamase beta like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019293656.3
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(498733..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511995,515242..515329,515944..516038))
location: region:498733-516038:-1
so has part: feature:515944-516038:-1:exon
so has part: feature:515242-515329:-1:exon
so has part: feature:511851-511995:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:498733-500285:-1:exon

position:516038:-1
position: 516038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515944-516038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515242-515329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511851-511995:-1:exon

position:511995:-1
position: 511995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498733-500285:-1:exon

LACTBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LACTBL1
product: lactamase beta like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019293658.3
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(498733..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511992,514505..514880))
location: region:498733-514880:-1
so has part: feature:514505-514880:-1:exon
so has part: feature:511851-511992:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:498733-500285:-1:exon

position:514880:-1
position: 514880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514505-514880:-1:exon

position:514505:-1
position: 514505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498733-500285:-1:exon

LACTBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LACTBL1
product: lactamase beta like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010412474.4
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(498733..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511995,514505..514879))
location: region:498733-514879:-1
so has part: feature:514505-514879:-1:exon
so has part: feature:511851-511995:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:498733-500285:-1:exon

position:514879:-1
position: 514879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514505-514879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498733-500285:-1:exon

LACTBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LACTBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative beta-lactamase-like 1 isoform X2
translation: MEGLQLRAPSSQSFLKLAAMEVKWIHVLVVFLFLLSVAMTGCFLWQYSLPKVEPSPSVMEVRSEAVQMCPRYPEPVPLDHPLPILKEALEKVDLMLRQKMHNSGLPAMSAIVIYNDTVLWTGNFGKKNGSDPTSGLPNEYTIYRIASVSKIFPTIMLYRMWEEGKVTSLDDPLERYAQNFVIKNPLGRLKDSEQRYTADGLVFLEKGSMPLKPSPVTLRRMASQLSGLPRRLRSTSLLWKGNTQDALTLLKDDVLVADPGTRCHYSNLAFSLMAHVLADHAANGQYQRWISENILDRLGMEDTGFDITAPIRSQMAVGFYGSQQPAPLYDLGWYRPSGQMYSTAADLAKLAMVFLGTYHRRLLEPDTVKTMLTPLFKCSVEYFANKTGTPWEINEQMGYDVIRKDGDLDGYSATFSLIPKLRLSFIVLMAGPRPQGGDIVTQTYEYLIPAMETAFREADKSLVPPPNPIPYVGYYTYSNLTFYEIKVGIGGVLVMQQFGPHVEELIPEKYRTIKLHHLEDRVFQVVFDKEFPCVLHLGSASISLETQNGQLFNFYPFDRKGLSPGFDAPGLNTYNVVRVLRKPVFYS
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(499307..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511992,515242..515262))
location: region:499307-515262:-1
so has part: feature:515242-515262:-1:exon
so has part: feature:511851-511992:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:499307-500285:-1:exon

XP_019149202.1
type: Protein
SIO_000068: ncbiprotein

position:499307:-1
position: 499307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515262:-1
position: 515262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515242-515262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499307-500285:-1:exon

LACTBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LACTBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative beta-lactamase-like 1 isoform X1
translation: MEGLQLRQAPSSQSFLKLAAMEVKWIHVLVVFLFLLSVAMTGCFLWQYSLPKVEPSPSVMEVRSEAVQMCPRYPEPVPLDHPLPILKEALEKVDLMLRQKMHNSGLPAMSAIVIYNDTVLWTGNFGKKNGSDPTSGLPNEYTIYRIASVSKIFPTIMLYRMWEEGKVTSLDDPLERYAQNFVIKNPLGRLKDSEQRYTADGLVFLEKGSMPLKPSPVTLRRMASQLSGLPRRLRSTSLLWKGNTQDALTLLKDDVLVADPGTRCHYSNLAFSLMAHVLADHAANGQYQRWISENILDRLGMEDTGFDITAPIRSQMAVGFYGSQQPAPLYDLGWYRPSGQMYSTAADLAKLAMVFLGTYHRRLLEPDTVKTMLTPLFKCSVEYFANKTGTPWEINEQMGYDVIRKDGDLDGYSATFSLIPKLRLSFIVLMAGPRPQGGDIVTQTYEYLIPAMETAFREADKSLVPPPNPIPYVGYYTYSNLTFYEIKVGIGGVLVMQQFGPHVEELIPEKYRTIKLHHLEDRVFQVVFDKEFPCVLHLGSASISLETQNGQLFNFYPFDRKGLSPGFDAPGLNTYNVVRVLRKPVFYS
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(499307..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511995,515242..515262))
location: region:499307-515262:-1
so has part: feature:515242-515262:-1:exon
so has part: feature:511851-511995:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:499307-500285:-1:exon

XP_019149201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515242-515262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499307-500285:-1:exon

LACTBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LACTBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative beta-lactamase-like 1 isoform X4
translation: MAPSSQSFLKLAAMEVKWIHVLVVFLFLLSVAMTGCFLWQYSLPKVEPSPSVMEVRSEAVQMCPRYPEPVPLDHPLPILKEALEKVDLMLRQKMHNSGLPAMSAIVIYNDTVLWTGNFGKKNGSDPTSGLPNEYTIYRIASVSKIFPTIMLYRMWEEGKVTSLDDPLERYAQNFVIKNPLGRLKDSEQRYTADGLVFLEKGSMPLKPSPVTLRRMASQLSGLPRRLRSTSLLWKGNTQDALTLLKDDVLVADPGTRCHYSNLAFSLMAHVLADHAANGQYQRWISENILDRLGMEDTGFDITAPIRSQMAVGFYGSQQPAPLYDLGWYRPSGQMYSTAADLAKLAMVFLGTYHRRLLEPDTVKTMLTPLFKCSVEYFANKTGTPWEINEQMGYDVIRKDGDLDGYSATFSLIPKLRLSFIVLMAGPRPQGGDIVTQTYEYLIPAMETAFREADKSLVPPPNPIPYVGYYTYSNLTFYEIKVGIGGVLVMQQFGPHVEELIPEKYRTIKLHHLEDRVFQVVFDKEFPCVLHLGSASISLETQNGQLFNFYPFDRKGLSPGFDAPGLNTYNVVRVLRKPVFYS
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(499307..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511992,514505..514507))
location: region:499307-514507:-1
so has part: feature:514505-514507:-1:exon
so has part: feature:511851-511992:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:499307-500285:-1:exon

XP_019149203.1
type: Protein
SIO_000068: ncbiprotein

position:514507:-1
position: 514507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514505-514507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499307-500285:-1:exon

LACTBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LACTBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative beta-lactamase-like 1 isoform X3
translation: MQAPSSQSFLKLAAMEVKWIHVLVVFLFLLSVAMTGCFLWQYSLPKVEPSPSVMEVRSEAVQMCPRYPEPVPLDHPLPILKEALEKVDLMLRQKMHNSGLPAMSAIVIYNDTVLWTGNFGKKNGSDPTSGLPNEYTIYRIASVSKIFPTIMLYRMWEEGKVTSLDDPLERYAQNFVIKNPLGRLKDSEQRYTADGLVFLEKGSMPLKPSPVTLRRMASQLSGLPRRLRSTSLLWKGNTQDALTLLKDDVLVADPGTRCHYSNLAFSLMAHVLADHAANGQYQRWISENILDRLGMEDTGFDITAPIRSQMAVGFYGSQQPAPLYDLGWYRPSGQMYSTAADLAKLAMVFLGTYHRRLLEPDTVKTMLTPLFKCSVEYFANKTGTPWEINEQMGYDVIRKDGDLDGYSATFSLIPKLRLSFIVLMAGPRPQGGDIVTQTYEYLIPAMETAFREADKSLVPPPNPIPYVGYYTYSNLTFYEIKVGIGGVLVMQQFGPHVEELIPEKYRTIKLHHLEDRVFQVVFDKEFPCVLHLGSASISLETQNGQLFNFYPFDRKGLSPGFDAPGLNTYNVVRVLRKPVFYS
SIO_010081: LACTBL1
subclass of: SO_0000673
so part of: LACTBL1
location: complement(join(499307..500285,502121..502226,505319..505566,506948..507105,509445..509554,511851..511995,514505..514507))
location: region:499307-514507:-1
so has part: feature:514505-514507:-1:exon
so has part: feature:511851-511995:-1:exon
so has part: feature:509445-509554:-1:exon
so has part: feature:506948-507105:-1:exon
so has part: feature:505319-505566:-1:exon
so has part: feature:502121-502226:-1:exon
so has part: feature:499307-500285:-1:exon

XP_010410776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514505-514507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511851-511995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509445-509554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506948-507105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505319-505566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502121-502226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499307-500285:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 506033..506106
location: region:506033-506106:1
so has part: feature:506033-506106:1:exon
subclass of: SO_0000663

109146372
type: Gene
SIO_000068: ncbigene

position:506033:1
position: 506033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506106:1
position: 506106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506033-506106:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 932674
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:506067..506069,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 506033..506106
location: region:506033-506106:1
so has part: feature:506033-506106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506033-506106:1:exon

EPHB2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EPHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(591288..719686)
location: region:591288-719686:-1
so has part: feature:591288-719686:-1:exon
subclass of: SO_0000010

104697547
type: Gene
SIO_000068: ncbigene

position:591288:-1
position: 591288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719686:-1
position: 719686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591288-719686:-1:exon

EPHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EPHB2
product: EPH receptor B2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_039563977.1
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(591288..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607754..607818,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719686))
location: region:591288-719686:-1
so has part: feature:719518-719686:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607754-607818:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:591288-592579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719686:-1:exon

position:719518:-1
position: 719518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

position:680953:-1
position: 680953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681017:-1
position: 681017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

position:676104:-1
position: 676104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676788:-1
position: 676788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

position:636369:-1
position: 636369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636524:-1
position: 636524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

position:635234:-1
position: 635234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635569:-1
position: 635569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

position:616398:-1
position: 616398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616522:-1
position: 616522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

position:608672:-1
position: 608672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608834:-1
position: 608834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

position:607976:-1
position: 607976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608084:-1
position: 608084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607754-607818:-1:exon

position:607754:-1
position: 607754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607818:-1
position: 607818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

position:605118:-1
position: 605118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605240:-1
position: 605240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

position:604513:-1
position: 604513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604760:-1
position: 604760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

position:603696:-1
position: 603696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603911:-1
position: 603911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

position:600976:-1
position: 600976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601125:-1
position: 601125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

position:596843:-1
position: 596843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597036:-1
position: 597036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

position:595859:-1
position: 595859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596014:-1
position: 596014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:591288-592579:-1:exon

position:592579:-1
position: 592579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EPHB2
product: EPH receptor B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039563974.1
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(591288..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607706..607818,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719686))
location: region:591288-719686:-1
so has part: feature:719518-719686:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607706-607818:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:591288-592579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607706-607818:-1:exon

position:607706:-1
position: 607706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591288-592579:-1:exon

EPHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EPHB2
product: EPH receptor B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039563973.1
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(591288..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607706..607821,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719686))
location: region:591288-719686:-1
so has part: feature:719518-719686:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607706-607821:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:591288-592579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607706-607821:-1:exon

position:607821:-1
position: 607821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591288-592579:-1:exon

EPHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EPHB2
product: EPH receptor B2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_039563975.1
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(592215..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607754..607821,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719683))
location: region:592215-719683:-1
so has part: feature:719518-719683:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607754-607821:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:592215-592579:-1:exon

position:592215:-1
position: 592215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719683:-1
position: 719683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607754-607821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592215-592579:-1:exon

EPHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EPHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 2 isoform X4
translation: MPGPARTMGPLWLCCLPLALLPLLAAVEETLMDSTTATAELGWTVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNVPGSCKETFNLYYFESDFDSATKTFPNWMENPWMKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSKNGFYLAFQDYGGCMSLIAVRVFYRKCPRVIQNGAVFQETLSGAESTSLVAARGTCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCRAGYESVENGTVCRGCPLGTFKASQGDEGCVHCPINSRTTSEGATNCVCRNGYYRADADPVDMPCTTIPSAPQAVISSVNETSLMLEWSPPRDSGGREDLVYNIICKSCGAGRGACTRCGDNVQFAPRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKDLSELNSTTVKSPTNTVAVQNLKAGTIYVFQVRARTVAGYGRYSGKMYFQTMTEAEYQTSVQEKLPLIIGSSAAGLVFLIAVVVIGIVCSRRGFERADSEYTDKLQHYTSGHMTPGMKIYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPNALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGMNLPLLDRTIPDYTSFNTVDEWLDAIKMSQYKESFASAGFTTFDVVSQMTVEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSVEV
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(592471..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607754..607818,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719602))
location: region:592471-719602:-1
so has part: feature:719518-719602:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607754-607818:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:592471-592579:-1:exon

XP_039419911.1
type: Protein
SIO_000068: ncbiprotein

position:592471:-1
position: 592471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719602:-1
position: 719602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607754-607818:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592471-592579:-1:exon

EPHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EPHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 2 isoform X2
translation: MPGPARTMGPLWLCCLPLALLPLLAAVEETLMDSTTATAELGWTVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNVPGSCKETFNLYYFESDFDSATKTFPNWMENPWMKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSKNGFYLAFQDYGGCMSLIAVRVFYRKCPRVIQNGAVFQETLSGAESTSLVAARGTCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCRAGYESVENGTVCRGCPLGTFKASQGDEGCVHCPINSRTTSEGATNCVCRNGYYRADADPVDMPCTTIPSAPQAVISSVNETSLMLEWSPPRDSGGREDLVYNIICKSCGAGRGACTRCGDNVQFAPRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKDLSELNSTTVKSPTNTVAVQNLKAGTIYVFQVRARTVAGYGRYSGKMYFQTMTEAEYQTSVQEKLPLIIGSSAAGLVFLIAVVVIGIVCSRRGFERADSEYTDKLQHYTSGHSTYRGPPPAPGGRPLLVTPGMKIYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPNALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGMNLPLLDRTIPDYTSFNTVDEWLDAIKMSQYKESFASAGFTTFDVVSQMTVEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSVEV
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(592471..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607706..607818,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719602))
location: region:592471-719602:-1
so has part: feature:719518-719602:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607706-607818:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:592471-592579:-1:exon

XP_039419908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607706-607818:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592471-592579:-1:exon

EPHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EPHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 2 isoform X3
translation: MPGPARTMGPLWLCCLPLALLPLLAAVEETLMDSTTATAELGWTVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNVPGSCKETFNLYYFESDFDSATKTFPNWMENPWMKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSKNGFYLAFQDYGGCMSLIAVRVFYRKCPRVIQNGAVFQETLSGAESTSLVAARGTCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCRAGYESVENGTVCRGCPLGTFKASQGDEGCVHCPINSRTTSEGATNCVCRNGYYRADADPVDMPCTTIPSAPQAVISSVNETSLMLEWSPPRDSGGREDLVYNIICKSCGAGRGACTRCGDNVQFAPRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKDLSELNSTTVKSPTNTVAVQNLKAGTIYVFQVRARTVAGYGRYSGKMYFQTMTEAEYQTSVQEKLPLIIGSSAAGLVFLIAVVVIGIVCSRRRGFERADSEYTDKLQHYTSGHMTPGMKIYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPNALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGMNLPLLDRTIPDYTSFNTVDEWLDAIKMSQYKESFASAGFTTFDVVSQMTVEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSVEV
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(592471..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607754..607821,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719602))
location: region:592471-719602:-1
so has part: feature:719518-719602:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607754-607821:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:592471-592579:-1:exon

XP_039419909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607754-607821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592471-592579:-1:exon

EPHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EPHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 2 isoform X1
translation: MPGPARTMGPLWLCCLPLALLPLLAAVEETLMDSTTATAELGWTVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNVPGSCKETFNLYYFESDFDSATKTFPNWMENPWMKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSKNGFYLAFQDYGGCMSLIAVRVFYRKCPRVIQNGAVFQETLSGAESTSLVAARGTCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCRAGYESVENGTVCRGCPLGTFKASQGDEGCVHCPINSRTTSEGATNCVCRNGYYRADADPVDMPCTTIPSAPQAVISSVNETSLMLEWSPPRDSGGREDLVYNIICKSCGAGRGACTRCGDNVQFAPRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKDLSELNSTTVKSPTNTVAVQNLKAGTIYVFQVRARTVAGYGRYSGKMYFQTMTEAEYQTSVQEKLPLIIGSSAAGLVFLIAVVVIGIVCSRRRGFERADSEYTDKLQHYTSGHSTYRGPPPAPGGRPLLVTPGMKIYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPNALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGMNLPLLDRTIPDYTSFNTVDEWLDAIKMSQYKESFASAGFTTFDVVSQMTVEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSVEV
SIO_010081: EPHB2
subclass of: SO_0000673
so part of: EPHB2
location: complement(join(592471..592579,595859..596014,596843..597036,600976..601125,603696..603911,604513..604760,605118..605240,607706..607821,607976..608084,608672..608834,616398..616522,635234..635569,636369..636524,676104..676788,680953..681017,719518..719602))
location: region:592471-719602:-1
so has part: feature:719518-719602:-1:exon
so has part: feature:680953-681017:-1:exon
so has part: feature:676104-676788:-1:exon
so has part: feature:636369-636524:-1:exon
so has part: feature:635234-635569:-1:exon
so has part: feature:616398-616522:-1:exon
so has part: feature:608672-608834:-1:exon
so has part: feature:607976-608084:-1:exon
so has part: feature:607706-607821:-1:exon
so has part: feature:605118-605240:-1:exon
so has part: feature:604513-604760:-1:exon
so has part: feature:603696-603911:-1:exon
so has part: feature:600976-601125:-1:exon
so has part: feature:596843-597036:-1:exon
so has part: feature:595859-596014:-1:exon
so has part: feature:592471-592579:-1:exon

XP_039419907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:719518-719602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680953-681017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676104-676788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636369-636524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616398-616522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608672-608834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607976-608084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607706-607821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605118-605240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604513-604760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603696-603911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600976-601125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596843-597036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595859-596014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592471-592579:-1:exon

C1QB
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: C1QB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745036..747461)
location: region:745036-747461:-1
so has part: feature:745036-747461:-1:exon
subclass of: SO_0000010

104697576
type: Gene
SIO_000068: ncbigene

position:745036:-1
position: 745036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747461:-1
position: 747461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745036-747461:-1:exon

C1QB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C1QB
product: complement C1q B chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_039564042.1
SIO_010081: C1QB
subclass of: SO_0000673
so part of: C1QB
location: complement(join(745036..745742,746044..746203,747353..747461))
location: region:745036-747461:-1
so has part: feature:747353-747461:-1:exon
so has part: feature:746044-746203:-1:exon
so has part: feature:745036-745742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:747353-747461:-1:exon

position:747353:-1
position: 747353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:746044-746203:-1:exon

position:746044:-1
position: 746044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746203:-1
position: 746203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745036-745742:-1:exon

position:745742:-1
position: 745742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C1QB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q subcomponent subunit B
translation: MWTMWAMLICLAGGQLASATLCRTYGTVPGIPGLPGQPGSDGRDGENGPKGEQGPPGQGGAERGEKGDPGPPGHPGKFGPMGPPGQTGLPGSRGAPGPMGEPGDYKVTFKSAFSAARSISSYPRREQPVRFDRIITNENGHYENRYGRFTCSVPGIYYFTYHVTSRGNLCLNIKKGRGGSRGDKVVTFCDFVHSSFQVTTGGVVLKMAMNESVWLEPTEKNSLVGLEGSDSIFSGFLIFPEA
SIO_010081: C1QB
subclass of: SO_0000673
so part of: C1QB
location: complement(join(745174..745742,746044..746203))
location: region:745174-746203:-1
so has part: feature:746044-746203:-1:exon
so has part: feature:745174-745742:-1:exon

XP_039419976.1
type: Protein
SIO_000068: ncbiprotein

position:745174:-1
position: 745174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746044-746203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745174-745742:-1:exon

C1QC
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: C1QC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(748402..750554)
location: region:748402-750554:-1
so has part: feature:748402-750554:-1:exon
subclass of: SO_0000010

104697545
type: Gene
SIO_000068: ncbigene

position:748402:-1
position: 748402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750554:-1
position: 750554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748402-750554:-1:exon

C1QC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C1QC
product: complement C1q C chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010412468.4
SIO_010081: C1QC
subclass of: SO_0000673
so part of: C1QC
location: complement(join(748402..749375,749593..749782,750448..750554))
location: region:748402-750554:-1
so has part: feature:750448-750554:-1:exon
so has part: feature:749593-749782:-1:exon
so has part: feature:748402-749375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750448-750554:-1:exon

position:750448:-1
position: 750448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749593-749782:-1:exon

position:749593:-1
position: 749593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749782:-1
position: 749782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:748402-749375:-1:exon

position:749375:-1
position: 749375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C1QC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q subcomponent subunit C
translation: MEKRFWEQLCLALTLLLLNLGSAVTAKDPHSCYGAPGLPGMPGVPGRDGRDGLKGAKGEPGISASSTQLGPKGMKGEPGFPGPPGKPGPPGAPGPRGIPGTVGIAGPPGMPGSSKQKHQSAFSVTRQTSQYPLKNVPVVFNTVITNTNHDYDTTTGKFTCRLPGVYYFVFHSSHTANLCVILHKNQRRMASFCDHKTNTMQVSSGGTLLHLAAADEVWLGVNDYNGMVGIANSDSIFSGFLLFPD
SIO_010081: C1QC
subclass of: SO_0000673
so part of: C1QC
location: complement(join(748819..749375,749593..749773))
location: region:748819-749773:-1
so has part: feature:749593-749773:-1:exon
so has part: feature:748819-749375:-1:exon

XP_010410770.3
type: Protein
SIO_000068: ncbiprotein

position:748819:-1
position: 748819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749773:-1
position: 749773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749593-749773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748819-749375:-1:exon

C1QA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: C1QA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751649..753790)
location: region:751649-753790:-1
so has part: feature:751649-753790:-1:exon
subclass of: SO_0000010

120411108
type: Gene
SIO_000068: ncbigene

position:751649:-1
position: 751649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753790:-1
position: 753790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751649-753790:-1:exon

C1QA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C1QA
product: complement C1q A chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039564040.1
SIO_010081: C1QA
subclass of: SO_0000673
so part of: C1QA
location: complement(join(751649..752622,752738..752908,753658..753790))
location: region:751649-753790:-1
so has part: feature:753658-753790:-1:exon
so has part: feature:752738-752908:-1:exon
so has part: feature:751649-752622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753658-753790:-1:exon

position:753658:-1
position: 753658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752738-752908:-1:exon

position:752738:-1
position: 752738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752908:-1
position: 752908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751649-752622:-1:exon

position:752622:-1
position: 752622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C1QA
product: complement C1q A chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564041.1
SIO_010081: C1QA
subclass of: SO_0000673
so part of: C1QA
location: complement(join(751649..752622,752738..752908,753121..753142,753679..753783))
location: region:751649-753783:-1
so has part: feature:753679-753783:-1:exon
so has part: feature:753121-753142:-1:exon
so has part: feature:752738-752908:-1:exon
so has part: feature:751649-752622:-1:exon

position:753783:-1
position: 753783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753679-753783:-1:exon

position:753679:-1
position: 753679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753121-753142:-1:exon

position:753121:-1
position: 753121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753142:-1
position: 753142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752738-752908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751649-752622:-1:exon

C1QA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C1QA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q subcomponent subunit A isoform X2
translation: MQVHPSHPSSLPPYSQRRASSKPSCCSHCSLCHGHVRGGRMQPGFLLAASTLAAVLGMALLEDGVCKAPDGKNGSPGAPGRDGRPGQKGDVGEPGRPASSTGTKGPKGDAGEPGPPGLPGMVGIPGPPGPSGMTGLPGMPGRKGIAGDILEHPRPAFSASRLSPPRAGTTVVFDRIITNQENSYSPQTGKFTCSIPGLYYFAYQVVSSGDLCLSITKNRLRVVSFCDNNSHGILQVNSGSSVLSLATGDQVSLTTDPARGSSIYSGSEADSVFSGFLVSPETA
SIO_010081: C1QA
subclass of: SO_0000673
so part of: C1QA
location: complement(join(752054..752622,752738..752908,753121..753142,753679..753768))
location: region:752054-753768:-1
so has part: feature:753679-753768:-1:exon
so has part: feature:753121-753142:-1:exon
so has part: feature:752738-752908:-1:exon
so has part: feature:752054-752622:-1:exon

XP_039419975.1
type: Protein
SIO_000068: ncbiprotein

position:752054:-1
position: 752054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753768:-1
position: 753768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753679-753768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753121-753142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752738-752908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752054-752622:-1:exon

C1QA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C1QA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q subcomponent subunit A isoform X1
translation: MQPGFLLAASTLAAVLGMALLEDGVCKAPDGKNGSPGAPGRDGRPGQKGDVGEPGRPASSTGTKGPKGDAGEPGPPGLPGMVGIPGPPGPSGMTGLPGMPGRKGIAGDILEHPRPAFSASRLSPPRAGTTVVFDRIITNQENSYSPQTGKFTCSIPGLYYFAYQVVSSGDLCLSITKNRLRVVSFCDNNSHGILQVNSGSSVLSLATGDQVSLTTDPARGSSIYSGSEADSVFSGFLVSPETA
SIO_010081: C1QA
subclass of: SO_0000673
so part of: C1QA
location: complement(join(752054..752622,752738..752900))
location: region:752054-752900:-1
so has part: feature:752738-752900:-1:exon
so has part: feature:752054-752622:-1:exon

XP_039419974.1
type: Protein
SIO_000068: ncbiprotein

position:752900:-1
position: 752900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752738-752900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752054-752622:-1:exon

EPHA8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EPHA8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(802595..855688)
location: region:802595-855688:-1
so has part: feature:802595-855688:-1:exon
subclass of: SO_0000010

104697575
type: Gene
SIO_000068: ncbigene

position:802595:-1
position: 802595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855688:-1
position: 855688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802595-855688:-1:exon

EPHA8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EPHA8
product: EPH receptor A8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039564101.1
SIO_010081: EPHA8
subclass of: SO_0000673
so part of: EPHA8
location: complement(join(802595..804866,806161..806316,807345..807535,808746..808895,810876..811085,811424..811485,812093..812278,813087..813212,813698..813765,814420..814516,815287..815449,815571..815695,817900..818235,819513..819668,832815..833478,843119..843183,855471..855688))
location: region:802595-855688:-1
so has part: feature:855471-855688:-1:exon
so has part: feature:843119-843183:-1:exon
so has part: feature:832815-833478:-1:exon
so has part: feature:819513-819668:-1:exon
so has part: feature:817900-818235:-1:exon
so has part: feature:815571-815695:-1:exon
so has part: feature:815287-815449:-1:exon
so has part: feature:814420-814516:-1:exon
so has part: feature:813698-813765:-1:exon
so has part: feature:813087-813212:-1:exon
so has part: feature:812093-812278:-1:exon
so has part: feature:811424-811485:-1:exon
so has part: feature:810876-811085:-1:exon
so has part: feature:808746-808895:-1:exon
so has part: feature:807345-807535:-1:exon
so has part: feature:806161-806316:-1:exon
so has part: feature:802595-804866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:855471-855688:-1:exon

position:855471:-1
position: 855471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:843119-843183:-1:exon

position:843119:-1
position: 843119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843183:-1
position: 843183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:832815-833478:-1:exon

position:832815:-1
position: 832815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833478:-1
position: 833478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:819513-819668:-1:exon

position:819513:-1
position: 819513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819668:-1
position: 819668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:817900-818235:-1:exon

position:817900:-1
position: 817900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818235:-1
position: 818235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815571-815695:-1:exon

position:815571:-1
position: 815571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815695:-1
position: 815695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:815287-815449:-1:exon

position:815287:-1
position: 815287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815449:-1
position: 815449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:814420-814516:-1:exon

position:814420:-1
position: 814420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814516:-1
position: 814516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:813698-813765:-1:exon

position:813698:-1
position: 813698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813765:-1
position: 813765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:813087-813212:-1:exon

position:813087:-1
position: 813087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813212:-1
position: 813212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:812093-812278:-1:exon

position:812093:-1
position: 812093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812278:-1
position: 812278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:811424-811485:-1:exon

position:811424:-1
position: 811424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811485:-1
position: 811485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:810876-811085:-1:exon

position:810876:-1
position: 810876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811085:-1
position: 811085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:808746-808895:-1:exon

position:808746:-1
position: 808746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808895:-1
position: 808895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:807345-807535:-1:exon

position:807345:-1
position: 807345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807535:-1
position: 807535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:806161-806316:-1:exon

position:806161:-1
position: 806161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806316:-1
position: 806316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:802595-804866:-1:exon

position:804866:-1
position: 804866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EPHA8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 8
translation: MAWAQGDLTSSLSIVITLAACLSATTSEVNLLDTSTIPGDWGWMTYPSHGWDSINEMDEFFSPIHTYQVCNVMTPNQNNWLRTNWVQRDGARRVYAEIKFTLRDCNSMPGVLGTCKETFNLYYMESDRDLGTSTRESQFLKIDTIAADESFTNVDLGVRRLKLNTEVRGVGPLSKRGFYLAFQDIGACIAIVSVRVYYKKCPATVRNLASFSEAVTGADSSSLVEVRGECVGHSEERDTPKMYCSAEGEWLVPIGKCVCSAGYEEQRDSCMACQLGFYKSAPGDQLCAKCPLHSHSESRAARVCRCDSSFYRAVQDPPSAACTRPPSAPVNLISSVNGTSVTLEWGPPLDKGGRADIVYNVLCRRCAGDAGPCEACGSSIRFVPQQMSLVQGALTVTNLLAHTNYSFWVEAVNGVSDLSLESRRAAVANITTNQAAPSQVVVVHQESTGQNSVTLLWQEPDQPNGIILEYEIKYYEKDKEMQSYSTLKSKSTTATISGLKPATRYIFQVRARTSAGCGRFSQTVEVETGKPASLRYDTMTIVWICLTLITGLVALLVVLICKKRHCGYSKAFQDSDEEKMHYQNGQVKFPESKFYVDPHTYEDPCQAVHEFTREIEASRIKIEKVIGSGESGEVCYGRLKLPGKREIAVAIKALKAGYTEKQRRDFLSEASIMAQFDHPNVIHLEGVVTRSKLVMIVTEYMENGSLDTFLRKHDGQFTVIQLVGMLRGIGAGMRYLSDLGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAYRKFSSASDVWSYGIVMWEVLAYGERPYWNMTNRDVINSVEEGYRLPAPMGCPTTLHQLMLDCWQKDRSERPRFSQIVGILDKLIRNPDNLKCMGTVNRFTQTRLDRGLLDLTSCLTVEDWLDSIRLGHYRENFAMAGYSSLGMVMRMNIEDVRSLGITMMGHQKKILSSIQAMRSQLLNTNSPRRHL
SIO_010081: EPHA8
subclass of: SO_0000673
so part of: EPHA8
location: complement(join(804752..804866,806161..806316,807345..807535,808746..808895,810876..811085,811424..811485,812093..812278,813087..813212,813698..813765,814420..814516,815287..815449,815571..815695,817900..818235,819513..819668,832815..833478,843119..843183,855471..855555))
location: region:804752-855555:-1
so has part: feature:855471-855555:-1:exon
so has part: feature:843119-843183:-1:exon
so has part: feature:832815-833478:-1:exon
so has part: feature:819513-819668:-1:exon
so has part: feature:817900-818235:-1:exon
so has part: feature:815571-815695:-1:exon
so has part: feature:815287-815449:-1:exon
so has part: feature:814420-814516:-1:exon
so has part: feature:813698-813765:-1:exon
so has part: feature:813087-813212:-1:exon
so has part: feature:812093-812278:-1:exon
so has part: feature:811424-811485:-1:exon
so has part: feature:810876-811085:-1:exon
so has part: feature:808746-808895:-1:exon
so has part: feature:807345-807535:-1:exon
so has part: feature:806161-806316:-1:exon
so has part: feature:804752-804866:-1:exon

XP_039420035.1
type: Protein
SIO_000068: ncbiprotein

position:804752:-1
position: 804752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855555:-1
position: 855555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855471-855555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843119-843183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832815-833478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:819513-819668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:817900-818235:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815571-815695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:815287-815449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:814420-814516:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:813698-813765:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:813087-813212:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:812093-812278:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:811424-811485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810876-811085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:808746-808895:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807345-807535:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:806161-806316:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:804752-804866:-1:exon

ZBTB40
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZBTB40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901522..946173)
location: region:901522-946173:-1
so has part: feature:901522-946173:-1:exon
subclass of: SO_0000010

104697544
type: Gene
SIO_000068: ncbigene

position:901522:-1
position: 901522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946173:-1
position: 946173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901522-946173:-1:exon

ZBTB40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZBTB40
product: zinc finger and BTB domain containing 40
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 5 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039564028.1
SIO_010081: ZBTB40
subclass of: SO_0000673
so part of: ZBTB40
location: complement(join(901522..905139,905867..906087,907049..907135,909609..909771,910599..910808,911226..911385,912185..912396,912842..913247,917147..917315,918383..918515,919480..919637,919989..920003,920150..920291,922680..922872,930289..930431,930939..931179,937466..937599,938201..939000,940056..940479,946043..946173))
location: region:901522-946173:-1
so has part: feature:946043-946173:-1:exon
so has part: feature:940056-940479:-1:exon
so has part: feature:938201-939000:-1:exon
so has part: feature:937466-937599:-1:exon
so has part: feature:930939-931179:-1:exon
so has part: feature:930289-930431:-1:exon
so has part: feature:922680-922872:-1:exon
so has part: feature:920150-920291:-1:exon
so has part: feature:919989-920003:-1:exon
so has part: feature:919480-919637:-1:exon
so has part: feature:918383-918515:-1:exon
so has part: feature:917147-917315:-1:exon
so has part: feature:912842-913247:-1:exon
so has part: feature:912185-912396:-1:exon
so has part: feature:911226-911385:-1:exon
so has part: feature:910599-910808:-1:exon
so has part: feature:909609-909771:-1:exon
so has part: feature:907049-907135:-1:exon
so has part: feature:905867-906087:-1:exon
so has part: feature:901522-905139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946043-946173:-1:exon

position:946043:-1
position: 946043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940056-940479:-1:exon

position:940056:-1
position: 940056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940479:-1
position: 940479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938201-939000:-1:exon

position:938201:-1
position: 938201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939000:-1
position: 939000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937466-937599:-1:exon

position:937466:-1
position: 937466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937599:-1
position: 937599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930939-931179:-1:exon

position:930939:-1
position: 930939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931179:-1
position: 931179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:930289-930431:-1:exon

position:930289:-1
position: 930289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930431:-1
position: 930431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:922680-922872:-1:exon

position:922680:-1
position: 922680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922872:-1
position: 922872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:920150-920291:-1:exon

position:920150:-1
position: 920150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920291:-1
position: 920291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:919989-920003:-1:exon

position:919989:-1
position: 919989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920003:-1
position: 920003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:919480-919637:-1:exon

position:919480:-1
position: 919480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919637:-1
position: 919637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:918383-918515:-1:exon

position:918383:-1
position: 918383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918515:-1
position: 918515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:917147-917315:-1:exon

position:917147:-1
position: 917147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917315:-1
position: 917315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:912842-913247:-1:exon

position:912842:-1
position: 912842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913247:-1
position: 913247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:912185-912396:-1:exon

position:912185:-1
position: 912185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912396:-1
position: 912396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:911226-911385:-1:exon

position:911226:-1
position: 911226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911385:-1
position: 911385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:910599-910808:-1:exon

position:910599:-1
position: 910599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910808:-1
position: 910808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:909609-909771:-1:exon

position:909609:-1
position: 909609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909771:-1
position: 909771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:907049-907135:-1:exon

position:907049:-1
position: 907049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907135:-1
position: 907135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:905867-906087:-1:exon

position:905867:-1
position: 905867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906087:-1
position: 906087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:901522-905139:-1:exon

position:905139:-1
position: 905139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZBTB40
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 5 codons; deleted 1 base in 1 codon; substituted 7 bases at 7 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(938352..938354),aa:OTHER)
transl except: (pos:complement(930943..930945),aa:OTHER)
transl except: (pos:complement(922720..922722),aa:OTHER)
transl except: (pos:complement(920260..920262),aa:OTHER)
transl except: (pos:complement(920251..920253),aa:OTHER)
transl except: (pos:complement(912191..912193),aa:OTHER)
transl except: (pos:complement(909634..909636),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 40
translation: MSAQPVPSICSCCDLVQVGSCSEPDFIEKCSRIHPFHYLGFVKAVWRPRQEEASRCHGASQYSWKLLPQLYALCNCTIFIGNMHFRAHEVVLAAASLLFKSLLDSTDTISIDASVVTPEAFALLLQMMYNGRLPLGKHSFTEVISMADSLQMFDVAVSRKNLLRDLMSCSAQDQVVRGVSSQEADSSGNQAEANYLPQSGRPDQEKTFVILTQRVSPLPGPVEAEMEAGVSPSGQELTVNHTXAHQDTMLSDSRSLQEDSGSGPDQPAHAEWSSCVEEELAESPEGKGRSRDLAAESKSCKLDSFVGYESVFSEALSDAQAVLKRLEECREIDASQKEALAACLAKAEKQSVFKELLGKVKDARSQDAHAQDSDTRDTRPLDTQTLVSFLKLFQDTNPELRVALLEREHSSREAPQXAESTAREETLTALLLCCRGELIQSVTQLSPIIEFLEAVEEAFLTASEKQVVLDCCEGGSQREAMDNLVRKVNEEKTLKVESLVKLLEAVKASFPGLQLLXDNLVATANISDGKAQKDYGAKLLXQYXENFVELLTDTQVLLEDISAAWSLAPAEREMSRLLGNEAGGFASLVLAVLEWQSLSVSAVWQLLMAVQESASLKLSMKDIQKQPSTEFFFQRVATGESTASEIILQHGKLISEDIQQKEDLKGLAPXEAGLREQVKELLSISAQTESSEASLKAALCTAQGKSVPAIKICHLLCSVQESFPDLQPVMQELGRVGLLTEGRGEKPGIRRWTVNNESQLEALDKDEDKVGGASAKEAKESQDKASSKKSFVCKACDKVFHFYCCLKVHMKCCWVARGKQIQCKEHSEVKSTKKELEKHQLEVHGMVGMAKKKKKSIPVACDICGXEFAHASGMQYHKXTEHLDEKPFSFQEWGAKFAANSTLKNHLRLHTGDGPFVCKHCLITFRQASALAYHTKKEACXGGVYSCQCCDTVFTQSIELSRHVCAHTGDKPYVCWECRKGFHQANGLSIHLQTFHTDTEDPYDCRKYQMSFATLQEHRKHVREAHSRGYHPCPTCSKIFSAPSLLECHMVLGXSPFTGEMCNKAYQQLSGLWYHNTTHHPDVFAAQNHQSSKFSSVQCGCCDKTFISTAAHXRHVEAEHTDVKFHECESCKELFLTLALLQVHMKYRHSGSQLFRCLYCSMAFRSPGVLQSHITSQHITQTDSTFTCELCGELFPSQGKLEGHLSTEHPKVAFSQATMAQIVQVTQTLEQEAAEHIISSDDAKPMMLPKSQVSQTGSELVAVTMEDLSDXAVTLICEEIK
SIO_010081: ZBTB40
subclass of: SO_0000673
so part of: ZBTB40
location: complement(join(904968..905139,905867..906087,907049..907135,909609..909771,910599..910808,911226..911385,912185..912396,912842..913247,917147..917315,918383..918515,919480..919637,919989..920003,920150..920291,922680..922872,930289..930431,930939..931179,937466..937599,938201..939000,940056..940135))
location: region:904968-940135:-1
so has part: feature:940056-940135:-1:exon
so has part: feature:938201-939000:-1:exon
so has part: feature:937466-937599:-1:exon
so has part: feature:930939-931179:-1:exon
so has part: feature:930289-930431:-1:exon
so has part: feature:922680-922872:-1:exon
so has part: feature:920150-920291:-1:exon
so has part: feature:919989-920003:-1:exon
so has part: feature:919480-919637:-1:exon
so has part: feature:918383-918515:-1:exon
so has part: feature:917147-917315:-1:exon
so has part: feature:912842-913247:-1:exon
so has part: feature:912185-912396:-1:exon
so has part: feature:911226-911385:-1:exon
so has part: feature:910599-910808:-1:exon
so has part: feature:909609-909771:-1:exon
so has part: feature:907049-907135:-1:exon
so has part: feature:905867-906087:-1:exon
so has part: feature:904968-905139:-1:exon

XP_039419962.1
type: Protein
SIO_000068: ncbiprotein

position:904968:-1
position: 904968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940135:-1
position: 940135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940056-940135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938201-939000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937466-937599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930939-931179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930289-930431:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922680-922872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:920150-920291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:919989-920003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:919480-919637:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:918383-918515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:917147-917315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912842-913247:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912185-912396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:911226-911385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:910599-910808:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:909609-909771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907049-907135:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:905867-906087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:904968-905139:-1:exon

LOC109146371
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(996434..1037784)
location: region:996434-1037784:-1
so has part: feature:996434-1037784:-1:exon
subclass of: SO_0000011

109146371
type: Gene
SIO_000068: ncbigene

position:996434:-1
position: 996434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037784:-1
position: 1037784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996434-1037784:-1:exon

LOC109146371
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146371
product: uncharacterized LOC109146371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002048340.3
SIO_010081: LOC109146371
subclass of: SO_0000673
so part of: LOC109146371
location: complement(join(996434..997026,1007783..1007883,1009577..1011269,1034829..1035430,1036930..1037784))
location: region:996434-1037784:-1
so has part: feature:1036930-1037784:-1:exon
so has part: feature:1034829-1035430:-1:exon
so has part: feature:1009577-1011269:-1:exon
so has part: feature:1007783-1007883:-1:exon
so has part: feature:996434-997026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036930-1037784:-1:exon

position:1036930:-1
position: 1036930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034829-1035430:-1:exon

position:1034829:-1
position: 1034829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035430:-1
position: 1035430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009577-1011269:-1:exon

position:1009577:-1
position: 1009577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011269:-1
position: 1011269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007783-1007883:-1:exon

position:1007783:-1
position: 1007783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007883:-1
position: 1007883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:996434-997026:-1:exon

position:997026:-1
position: 997026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: WNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1094008..1113707
location: region:1094008-1113707:1
so has part: feature:1094008-1113707:1:exon
subclass of: SO_0000010

104697541
type: Gene
SIO_000068: ncbigene

position:1094008:1
position: 1094008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113707:1
position: 1113707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094008-1113707:1:exon

WNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WNT4
product: Wnt family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 74 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039564035.1
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1094008..1094244,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1113707)
location: region:1094008-1113707:1
so has part: feature:1094008-1094244:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1113707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094008-1094244:1:exon

position:1094244:1
position: 1094244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1105309-1105544:1:exon

position:1105309:1
position: 1105309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105544:1
position: 1105544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1107569-1107700:1:exon

position:1107569:1
position: 1107569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107700:1
position: 1107700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1108069-1108211:1:exon

position:1108069:1
position: 1108069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108211:1
position: 1108211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1108436-1113707:1:exon

position:1108436:1
position: 1108436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WNT4
product: Wnt family member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039564036.1
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1094096..1094244,1095272..1095372,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1113707)
location: region:1094096-1113707:1
so has part: feature:1094096-1094244:1:exon
so has part: feature:1095272-1095372:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1113707:1:exon

position:1094096:1
position: 1094096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094096-1094244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095272-1095372:1:exon

position:1095272:1
position: 1095272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095372:1
position: 1095372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1108436-1113707:1:exon

WNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-4 isoform X2
translation: MSPEYSLRSLLLIILATFSANASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDTLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELDKCGCDRTVQGGSPQGFQWSGCSDNIAYGVAFSQSFVDIRERSKGASSNRALMNLHNNEAGRKAILNNMRVECKCHGVSGSCEFKTCWKAMPPFRKVGNILKEKFDGATEVEQSEIGSTKVLVPKNSQFKPHTDEDLVYLDSSPDFCDHDLKNGVLGTSGRQCNKTSKAIDGCELMCCGRGFHTDEVEVVERCSCKFHWCCSVKCKPCHRVVEIHTCR
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1094168..1094244,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1108903)
location: region:1094168-1108903:1
so has part: feature:1094168-1094244:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1108903:1:exon

XP_039419969.1
type: Protein
SIO_000068: ncbiprotein

position:1094168:1
position: 1094168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108903:1
position: 1108903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094168-1094244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108436-1108903:1:exon

WNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WNT4
product: Wnt family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019293690.3
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1095296..1095372,1095508..1095603,1096086..1096318,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1113707)
location: region:1095296-1113707:1
so has part: feature:1095296-1095372:1:exon
so has part: feature:1095508-1095603:1:exon
so has part: feature:1096086-1096318:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1113707:1:exon

position:1095296:1
position: 1095296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095296-1095372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095508-1095603:1:exon

position:1095508:1
position: 1095508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095603:1
position: 1095603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096086-1096318:1:exon

position:1096086:1
position: 1096086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096318:1
position: 1096318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108436-1113707:1:exon

WNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WNT4
product: Wnt family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039564034.1
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1095968..1096318,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1113707)
location: region:1095968-1113707:1
so has part: feature:1095968-1096318:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1113707:1:exon

position:1095968:1
position: 1095968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095968-1096318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108436-1113707:1:exon

WNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-4 isoform X1
translation: MSVPRMSSRVWARHARRYPRALPACTQHTGRIQPRQAHGSAQRYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDTLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELDKCGCDRTVQGGSPQGFQWSGCSDNIAYGVAFSQSFVDIRERSKGASSNRALMNLHNNEAGRKAILNNMRVECKCHGVSGSCEFKTCWKAMPPFRKVGNILKEKFDGATEVEQSEIGSTKVLVPKNSQFKPHTDEDLVYLDSSPDFCDHDLKNGVLGTSGRQCNKTSKAIDGCELMCCGRGFHTDEVEVVERCSCKFHWCCSVKCKPCHRVVEIHTCR
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1096191..1096318,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1108903)
location: region:1096191-1108903:1
so has part: feature:1096191-1096318:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1108903:1:exon

XP_019149235.1
type: Protein
SIO_000068: ncbiprotein

position:1096191:1
position: 1096191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096191-1096318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108436-1108903:1:exon

WNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-4 isoform X1
translation: MSVPRMSSRVWARHARRYPRALPACTQHTGRIQPRQAHGSAQRYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDTLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELDKCGCDRTVQGGSPQGFQWSGCSDNIAYGVAFSQSFVDIRERSKGASSNRALMNLHNNEAGRKAILNNMRVECKCHGVSGSCEFKTCWKAMPPFRKVGNILKEKFDGATEVEQSEIGSTKVLVPKNSQFKPHTDEDLVYLDSSPDFCDHDLKNGVLGTSGRQCNKTSKAIDGCELMCCGRGFHTDEVEVVERCSCKFHWCCSVKCKPCHRVVEIHTCR
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1096191..1096318,1105309..1105544,1107569..1107700,1108069..1108211,1108436..1108903)
location: region:1096191-1108903:1
so has part: feature:1096191-1096318:1:exon
so has part: feature:1105309-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1108903:1:exon

XP_039419968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1096191-1096318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105309-1105544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108436-1108903:1:exon

WNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-4 isoform X3
translation: MCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDTLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELDKCGCDRTVQGGSPQGFQWSGCSDNIAYGVAFSQSFVDIRERSKGASSNRALMNLHNNEAGRKAILNNMRVECKCHGVSGSCEFKTCWKAMPPFRKVGNILKEKFDGATEVEQSEIGSTKVLVPKNSQFKPHTDEDLVYLDSSPDFCDHDLKNGVLGTSGRQCNKTSKAIDGCELMCCGRGFHTDEVEVVERCSCKFHWCCSVKCKPCHRVVEIHTCR
SIO_010081: WNT4
subclass of: SO_0000673
so part of: WNT4
location: join(1105397..1105544,1107569..1107700,1108069..1108211,1108436..1108903)
location: region:1105397-1108903:1
so has part: feature:1105397-1105544:1:exon
so has part: feature:1107569-1107700:1:exon
so has part: feature:1108069-1108211:1:exon
so has part: feature:1108436-1108903:1:exon

XP_039419970.1
type: Protein
SIO_000068: ncbiprotein

position:1105397:1
position: 1105397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105397-1105544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107569-1107700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108069-1108211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108436-1108903:1:exon

CDC42
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CDC42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1138167..1166197)
location: region:1138167-1166197:-1
so has part: feature:1138167-1166197:-1:exon
subclass of: SO_0000010

104697540
type: Gene
SIO_000068: ncbigene

position:1138167:-1
position: 1138167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166197:-1
position: 1166197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138167-1166197:-1:exon

CDC42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CDC42
product: cell division cycle 42, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 ESTs, 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563777.1
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1138167..1139571,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153313,1166098..1166196))
location: region:1138167-1166196:-1
so has part: feature:1166098-1166196:-1:exon
so has part: feature:1153172-1153313:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1138167-1139571:-1:exon

position:1166196:-1
position: 1166196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166098-1166196:-1:exon

position:1166098:-1
position: 1166098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153172-1153313:-1:exon

position:1153172:-1
position: 1153172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153313:-1
position: 1153313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148758-1148830:-1:exon

position:1148758:-1
position: 1148758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148830:-1
position: 1148830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145629-1145738:-1:exon

position:1145629:-1
position: 1145629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145738:-1
position: 1145738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1145335-1145532:-1:exon

position:1145335:-1
position: 1145335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145532:-1
position: 1145532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138167-1139571:-1:exon

position:1139571:-1
position: 1139571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CDC42
product: cell division cycle 42, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 ESTs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_010412461.3
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1138167..1139571,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153313,1164753..1164830))
location: region:1138167-1164830:-1
so has part: feature:1164753-1164830:-1:exon
so has part: feature:1153172-1153313:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1138167-1139571:-1:exon

position:1164830:-1
position: 1164830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164753-1164830:-1:exon

position:1164753:-1
position: 1164753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153172-1153313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148758-1148830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145629-1145738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145335-1145532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138167-1139571:-1:exon

CDC42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CDC42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division control protein 42 homolog isoform X1
translation: MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKTRRCVLL
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1139482..1139571,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153276))
location: region:1139482-1153276:-1
so has part: feature:1153172-1153276:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1139482-1139571:-1:exon

XP_039419711.1
type: Protein
SIO_000068: ncbiprotein

position:1139482:-1
position: 1139482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153276:-1
position: 1153276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153172-1153276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148758-1148830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145629-1145738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145335-1145532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139482-1139571:-1:exon

CDC42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CDC42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division control protein 42 homolog isoform X1
translation: MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKTRRCVLL
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1139482..1139571,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153276))
location: region:1139482-1153276:-1
so has part: feature:1153172-1153276:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1139482-1139571:-1:exon

XP_010410763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1153172-1153276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148758-1148830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145629-1145738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145335-1145532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139482-1139571:-1:exon

CDC42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CDC42
product: cell division cycle 42, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_039563778.1
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1139832..1141055,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153313,1166098..1166197))
location: region:1139832-1166197:-1
so has part: feature:1166098-1166197:-1:exon
so has part: feature:1153172-1153313:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1139832-1141055:-1:exon

position:1139832:-1
position: 1139832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166098-1166197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153172-1153313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148758-1148830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145629-1145738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145335-1145532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139832-1141055:-1:exon

position:1141055:-1
position: 1141055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CDC42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division control protein 42 homolog isoform X2
translation: MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQPKRKCCIF
SIO_010081: CDC42
subclass of: SO_0000673
so part of: CDC42
location: complement(join(1140966..1141055,1145335..1145532,1145629..1145738,1148758..1148830,1153172..1153276))
location: region:1140966-1153276:-1
so has part: feature:1153172-1153276:-1:exon
so has part: feature:1148758-1148830:-1:exon
so has part: feature:1145629-1145738:-1:exon
so has part: feature:1145335-1145532:-1:exon
so has part: feature:1140966-1141055:-1:exon

XP_039419712.1
type: Protein
SIO_000068: ncbiprotein

position:1140966:-1
position: 1140966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153172-1153276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148758-1148830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145629-1145738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145335-1145532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140966-1141055:-1:exon

C21H1orf50
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: C21H1orf50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1167691..>1172678)
location: region:1167691-1172678:-1
so has part: feature:1167691-1172678:-1:exon
subclass of: SO_0000010

104697574
type: Gene
SIO_000068: ncbigene

position:1167691:-1
position: 1167691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172678:-1
position: 1172678
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167691-1172678:-1:exon

C21H1orf50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C21H1orf50
product: chromosome 21 C1orf50 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563779.1
SIO_010081: C21H1orf50
subclass of: SO_0000673
so part of: C21H1orf50
location: complement(join(1167691..1169698,1170339..1170470,1171499..1171585,1172460..>1172678))
location: region:1167691-1172678:-1
so has part: feature:1172460-1172678:-1:exon
so has part: feature:1171499-1171585:-1:exon
so has part: feature:1170339-1170470:-1:exon
so has part: feature:1167691-1169698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172460-1172678:-1:exon

position:1172460:-1
position: 1172460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171499-1171585:-1:exon

position:1171499:-1
position: 1171499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171585:-1
position: 1171585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1170339-1170470:-1:exon

position:1170339:-1
position: 1170339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170470:-1
position: 1170470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1167691-1169698:-1:exon

position:1169698:-1
position: 1169698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H1orf50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C21H1orf50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf50 homolog
translation: RRSGNLLAGRKRCVAVGDGGGRRGGWGRWPRPGPGPGPGPGPGPGPGLALVEGSAGRVGDPGDLVALARQVQQANDFVRANACSKLTVIAEQIRHLQEQARKVLDEANRDADLNHVACNLVKKPGNVYYMYRRESGQRYFSILSPKEWGTTPHEFLGAYKLQHDMSWTPFEDIERRDAEITVLEKLLSRQAALPPCTEPNFQGLTKSHE
SIO_010081: C21H1orf50
subclass of: SO_0000673
so part of: C21H1orf50
location: complement(join(1169507..1169698,1170339..1170470,1171499..1171585,1172460..>1172678))
location: region:1169507-1172678:-1
so has part: feature:1172460-1172678:-1:exon
so has part: feature:1171499-1171585:-1:exon
so has part: feature:1170339-1170470:-1:exon
so has part: feature:1169507-1169698:-1:exon

XP_039419713.1
type: Protein
SIO_000068: ncbiprotein

position:1169507:-1
position: 1169507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172460-1172678:-1:exon