Corvus cornix cornix isolate S_Up_H32 chromosome 19, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 19, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_046348.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_046348.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022201.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11197607
topology: linear
so has quality: SO_0000987
location: 1..11197607
location: region:1-11197607:1
RO_0002162: 932674

NC_046348
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11197607:1
position: 11197607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11197607:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 19
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

LOC120411021
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 37517..38970
location: region:37517-38970:1
so has part: feature:37517-38970:1:exon
subclass of: SO_0000010

120411021
type: Gene
SIO_000068: ncbigene

position:37517:1
position: 37517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38970:1
position: 38970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37517-38970:1:exon

LOC120411021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411021
product: centrosome-associated protein CEP250-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039563027.1
SIO_010081: LOC120411021
subclass of: SO_0000673
so part of: LOC120411021
location: join(37517..37707,37977..38123,38305..38970)
location: region:37517-38970:1
so has part: feature:37517-37707:1:exon
so has part: feature:37977-38123:1:exon
so has part: feature:38305-38970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37517-37707:1:exon

position:37707:1
position: 37707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37977-38123:1:exon

position:37977:1
position: 37977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38123:1
position: 38123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38305-38970:1:exon

position:38305:1
position: 38305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120411021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome-associated protein CEP250-like
translation: MQFLLALIVELVVKRQTLEKLQLRKDLLEQEKDEFAVALEKAERSVAELTGAQNKLNAERTDLQAAAAKMSSINEALALDKVQLNKHVWQLEQEKEVLSAKVDEMEREKISEQEKLNFCERANEELCVEKARLEQLLKEAEEQQEQLWMELRTLGEEKAETQEKFRQVRPKM
SIO_010081: LOC120411021
subclass of: SO_0000673
so part of: LOC120411021
location: join(37585..37707,37977..38123,38305..38553)
location: region:37585-38553:1
so has part: feature:37585-37707:1:exon
so has part: feature:37977-38123:1:exon
so has part: feature:38305-38553:1:exon

XP_039418961.1
type: Protein
SIO_000068: ncbiprotein

position:37585:1
position: 37585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38553:1
position: 38553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37585-37707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37977-38123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38305-38553:1:exon

LOC104695814
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57536..61707)
location: region:57536-61707:-1
so has part: feature:57536-61707:-1:exon
subclass of: SO_0000010

104695814
type: Gene
SIO_000068: ncbigene

position:57536:-1
position: 57536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61707:-1
position: 61707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57536-61707:-1:exon

LOC104695814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695814
product: schlafen family member 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039562922.1
SIO_010081: LOC104695814
subclass of: SO_0000673
so part of: LOC104695814
location: complement(join(57536..61123,61501..61707))
location: region:57536-61707:-1
so has part: feature:61501-61707:-1:exon
so has part: feature:57536-61123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61501-61707:-1:exon

position:61501:-1
position: 61501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57536-61123:-1:exon

position:61123:-1
position: 61123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695814
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(60838..60840),aa:OTHER)
transl except: (pos:complement(60835..60837),aa:OTHER)
product: LOW QUALITY PROTEIN: schlafen family member 12-like
translation: MYPFRIRMASQEGQLLIDLNTSYPDVMSGTLVYPVTSREAPEFLRRKDSAKCRNENGLSPKRAQLSFDGGAKETPLNIQEHNTQEAVARFRKRDEVLFGEVLAFTEATHIEFKEYSTKSTLXXIRKNLPKYVSAFANTESGYLVFGVDDDGKVTRAHTNVVKVALEQTVANTIGSMSAHHVCGSGSGVQFQIHILGVYDQAGFSQGYAHAVHIELPCCPVFSGDPQSWMVLGVGREEIVGDWGRALTKRLSIRKWVELMTAADPDKTFIYVSVNFISVLCCECSGGKINLFSGCSHQT
SIO_010081: LOC104695814
subclass of: SO_0000673
so part of: LOC104695814
location: complement(join(60307..61123,61501..61580))
location: region:60307-61580:-1
so has part: feature:61501-61580:-1:exon
so has part: feature:60307-61123:-1:exon

XP_039418856.1
type: Protein
SIO_000068: ncbiprotein

position:60307:-1
position: 60307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61580:-1
position: 61580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61501-61580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60307-61123:-1:exon

BCL7B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62714..66734)
location: region:62714-66734:-1
so has part: feature:62714-66734:-1:exon
subclass of: SO_0000010

104695813
type: Gene
SIO_000068: ncbigene

position:62714:-1
position: 62714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66734:-1
position: 66734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62714-66734:-1:exon

BCL7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: BCL7B
product: BAF chromatin remodeling complex subunit BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563161.1
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(62714..63758,64134..64213,64419..64604,65475..65571,66251..66327,66643..66664,66720..66734))
location: region:62714-66734:-1
so has part: feature:66720-66734:-1:exon
so has part: feature:66643-66664:-1:exon
so has part: feature:66251-66327:-1:exon
so has part: feature:65475-65571:-1:exon
so has part: feature:64419-64604:-1:exon
so has part: feature:64134-64213:-1:exon
so has part: feature:62714-63758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66720-66734:-1:exon

position:66720:-1
position: 66720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66643-66664:-1:exon

position:66643:-1
position: 66643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66664:-1
position: 66664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66251-66327:-1:exon

position:66251:-1
position: 66251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66327:-1
position: 66327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65475-65571:-1:exon

position:65475:-1
position: 65475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65571:-1
position: 65571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64419-64604:-1:exon

position:64419:-1
position: 64419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64604:-1
position: 64604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64134-64213:-1:exon

position:64134:-1
position: 64134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64213:-1
position: 64213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62714-63758:-1:exon

position:63758:-1
position: 63758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 7 protein family member B
translation: MSGRSPSSASADGRKKWVTVGDTSLRIFKWVPVADSKEKEKSKSSSSTVREPNGFPADTSANSSLLLEFQGAVSADENSNQSSLSDVYQLKVDSSPNSSPSPQQSESMSPAHTSDFRTDDSQPPTLGQETLEEPSLPSSEVADEPPTLTKEEPVPLETQVTEEEEDSGAPPLKRFCADQNSVCHTASES
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(63666..63758,64134..64213,64419..64604,65475..65571,66251..66327,66643..66664,66720..66734))
location: region:63666-66734:-1
so has part: feature:66720-66734:-1:exon
so has part: feature:66643-66664:-1:exon
so has part: feature:66251-66327:-1:exon
so has part: feature:65475-65571:-1:exon
so has part: feature:64419-64604:-1:exon
so has part: feature:64134-64213:-1:exon
so has part: feature:63666-63758:-1:exon

XP_039419095.1
type: Protein
SIO_000068: ncbiprotein

position:63666:-1
position: 63666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66720-66734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66643-66664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66251-66327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65475-65571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64419-64604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64134-64213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63666-63758:-1:exon

TBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67322..72536)
location: region:67322-72536:-1
so has part: feature:67322-72536:-1:exon
subclass of: SO_0000010

104695791
type: Gene
SIO_000068: ncbigene

position:67322:-1
position: 67322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72536:-1
position: 72536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67322-72536:-1:exon

TBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TBL2
product: transducin beta like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563093.1
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(67322..67870,68842..68994,69637..69763,70850..71001,71629..71813,72102..72226,72313..72536))
location: region:67322-72536:-1
so has part: feature:72313-72536:-1:exon
so has part: feature:72102-72226:-1:exon
so has part: feature:71629-71813:-1:exon
so has part: feature:70850-71001:-1:exon
so has part: feature:69637-69763:-1:exon
so has part: feature:68842-68994:-1:exon
so has part: feature:67322-67870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72313-72536:-1:exon

position:72313:-1
position: 72313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72102-72226:-1:exon

position:72102:-1
position: 72102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72226:-1
position: 72226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71629-71813:-1:exon

position:71629:-1
position: 71629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71813:-1
position: 71813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70850-71001:-1:exon

position:70850:-1
position: 70850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71001:-1
position: 71001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69637-69763:-1:exon

position:69637:-1
position: 69637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69763:-1
position: 69763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:68842-68994:-1:exon

position:68842:-1
position: 68842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68994:-1
position: 68994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67322-67870:-1:exon

position:67870:-1
position: 67870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TBL2
product: transducin beta like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039563092.1
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(67322..67870,68842..68994,69637..69763,70850..71001,71093..71134,71629..71813,72102..72226,72313..72533))
location: region:67322-72533:-1
so has part: feature:72313-72533:-1:exon
so has part: feature:72102-72226:-1:exon
so has part: feature:71629-71813:-1:exon
so has part: feature:71093-71134:-1:exon
so has part: feature:70850-71001:-1:exon
so has part: feature:69637-69763:-1:exon
so has part: feature:68842-68994:-1:exon
so has part: feature:67322-67870:-1:exon

position:72533:-1
position: 72533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72313-72533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72102-72226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71629-71813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71093-71134:-1:exon

position:71093:-1
position: 71093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71134:-1
position: 71134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70850-71001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69637-69763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68842-68994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67322-67870:-1:exon

TBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2 isoform X2
translation: MEAAAALGGSGLPGALIVLILLVLVLLLAAVLHRSAPRETPVAPQDGPRANGHARPEEPRKAKPAARARREKQRQHSFAHRLLVAALKGHSSPVTCLDFSSNGKYLASCSEDRTVRLWSTRDLAGREHRCLRANVGLDHAELVRLSPDSRAFIVWLANAETIRVYKMTKKDDGSFTFTATSGDFPKKHKAPVINIGIAETGKFIMTASSDTTILIWSPKGEVLASINTNQMNNAYATVSPCGRFVASCGFTPDVKVWEVCFGKNGDFREVTRAFELKGHTAGVQSFSFSNDSRRMATVSKDGTWKFWDTDVEYKKQQDPYLLLTGQCAVLEPCRIALSPDSRTVAVAGGTDIVVYNTRRGEEEERFLGVHSHRIADLAFDTTGRYLVSCGDRAICVFHNTAGHRAVVEEMEAILKKTGNKATRERLEQQISSARKALAAIYGKKH
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(67414..67870,68842..68994,69637..69763,70850..71001,71629..71813,72102..72226,72313..72451))
location: region:67414-72451:-1
so has part: feature:72313-72451:-1:exon
so has part: feature:72102-72226:-1:exon
so has part: feature:71629-71813:-1:exon
so has part: feature:70850-71001:-1:exon
so has part: feature:69637-69763:-1:exon
so has part: feature:68842-68994:-1:exon
so has part: feature:67414-67870:-1:exon

XP_039419027.1
type: Protein
SIO_000068: ncbiprotein

position:67414:-1
position: 67414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72451:-1
position: 72451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72313-72451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72102-72226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71629-71813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70850-71001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69637-69763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68842-68994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67414-67870:-1:exon

TBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2 isoform X1
translation: MEAAAALGGSGLPGALIVLILLVLVLLLAAVLHRSAPRETPVAPQDGPRANGHARPEEPRKAKPAARARREKQRQHSFAHRLLVAALKGHSSPVTCLDFSSNGKYLASCSEDRTVRLWSTRDLAGREHRCLRANVGLDHAELVRLSPDSRVAVEPTQGENLVPLAFIVWLANAETIRVYKMTKKDDGSFTFTATSGDFPKKHKAPVINIGIAETGKFIMTASSDTTILIWSPKGEVLASINTNQMNNAYATVSPCGRFVASCGFTPDVKVWEVCFGKNGDFREVTRAFELKGHTAGVQSFSFSNDSRRMATVSKDGTWKFWDTDVEYKKQQDPYLLLTGQCAVLEPCRIALSPDSRTVAVAGGTDIVVYNTRRGEEEERFLGVHSHRIADLAFDTTGRYLVSCGDRAICVFHNTAGHRAVVEEMEAILKKTGNKATRERLEQQISSARKALAAIYGKKH
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(67414..67870,68842..68994,69637..69763,70850..71001,71093..71134,71629..71813,72102..72226,72313..72451))
location: region:67414-72451:-1
so has part: feature:72313-72451:-1:exon
so has part: feature:72102-72226:-1:exon
so has part: feature:71629-71813:-1:exon
so has part: feature:71093-71134:-1:exon
so has part: feature:70850-71001:-1:exon
so has part: feature:69637-69763:-1:exon
so has part: feature:68842-68994:-1:exon
so has part: feature:67414-67870:-1:exon

XP_039419026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72313-72451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72102-72226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71629-71813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71093-71134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70850-71001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69637-69763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68842-68994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67414-67870:-1:exon

MLXIPL
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(72759..91819)
location: region:72759-91819:-1
so has part: feature:72759-91819:-1:exon
subclass of: SO_0000010

104695812
type: Gene
SIO_000068: ncbigene

position:72759:-1
position: 72759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91819:-1
position: 91819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72759-91819:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MLXIPL
product: MLX interacting protein like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039563111.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72759..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78582,80409..82398))
location: region:72759-82398:-1
so has part: feature:80409-82398:-1:exon
so has part: feature:78410-78582:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72759-73078:-1:exon

position:82398:-1
position: 82398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80409-82398:-1:exon

position:80409:-1
position: 80409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78410-78582:-1:exon

position:78410:-1
position: 78410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78582:-1
position: 78582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77736-78330:-1:exon

position:77736:-1
position: 77736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78330:-1
position: 78330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77048-77121:-1:exon

position:77048:-1
position: 77048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77121:-1
position: 77121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76489-76663:-1:exon

position:76489:-1
position: 76489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76663:-1
position: 76663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75740-75852:-1:exon

position:75740:-1
position: 75740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75852:-1
position: 75852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75458-75577:-1:exon

position:75458:-1
position: 75458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75577:-1
position: 75577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75126-75253:-1:exon

position:75126:-1
position: 75126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75253:-1
position: 75253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:74712-74835:-1:exon

position:74712:-1
position: 74712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74835:-1
position: 74835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:73466-73595:-1:exon

position:73466:-1
position: 73466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73595:-1
position: 73595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:72759-73078:-1:exon

position:73078:-1
position: 73078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MLXIPL
product: MLX interacting protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039563107.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72764..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91818))
location: region:72764-91818:-1
so has part: feature:91323-91818:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72764-73078:-1:exon

position:72764:-1
position: 72764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91818:-1
position: 91818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91818:-1:exon

position:91323:-1
position: 91323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

position:84427:-1
position: 84427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84533:-1
position: 84533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

position:84205:-1
position: 84205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84287:-1
position: 84287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

position:83925:-1
position: 83925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84014:-1
position: 84014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

position:83654:-1
position: 83654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83698:-1
position: 83698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

position:83157:-1
position: 83157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83358:-1
position: 83358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

position:82418:-1
position: 82418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82495:-1
position: 82495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78624:-1:exon

position:78624:-1
position: 78624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72764-73078:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MLXIPL
product: MLX interacting protein like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039563109.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72765..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91530,91604..91817))
location: region:72765-91817:-1
so has part: feature:91604-91817:-1:exon
so has part: feature:91323-91530:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72765-73078:-1:exon

position:72765:-1
position: 72765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91817:-1
position: 91817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91604-91817:-1:exon

position:91604:-1
position: 91604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91323-91530:-1:exon

position:91530:-1
position: 91530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78410-78624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72765-73078:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MLXIPL
product: MLX interacting protein like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039563110.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72765..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91433,91604..91667))
location: region:72765-91667:-1
so has part: feature:91604-91667:-1:exon
so has part: feature:91323-91433:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72765-73078:-1:exon

position:91667:-1
position: 91667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91604-91667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91323-91433:-1:exon

position:91433:-1
position: 91433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78410-78624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72765-73078:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X1
translation: MAGAQVGLPGPFLEPPVGPCPVSDSDSDSEDAAVGGTGPSAGAQNSSQVIHSGHFMVSSPHSDSLPRRRHHRAEPEPADPRSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLRLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTREGEISSPKRDEDVWRPTEKWCNQLFCNVVPMLLGDEEEEERGSRQHFDLDAFLSDISDTLFTMTQMPSTHQALPEDVYVGNADMIQPDLAPLQPSLDDMDISGLLMPVTVSPLGPAEMFTGHRPPPSQTQPGYQDPSCFLPTAEPLFSSGASLMGAQGLPASPEAQLLPGTLLQPSGASQLSLHSAFLGSERPLAPLPPEPPNVAPSSLSPQLRHKPTLQYDLPGKCLSLEPPAPHYVPPIQCPRAPLLSPEPPFSPASAPRSKFPYASSPDPSLVTHPASPLSSPCFTPYIPGLGCATGMGTQGYPSPAASQLLPPALLGNPRFAPHKGLPQGGGGRPKAKPSGTKARRLPGQPLSHLPEPNPCPSQLLTAAKQDLALDTPRPMDAGLMPPAPVSPQQSTVPKVPATFFSRMAQMSPGLAPGSSPSQVVLHTVGTQPGPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSLSLHHPMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTMLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQHLREQIEELNGSINLCQEQLPATGVPITRQRFDHMRRMFDEYVRSSTLQNWKFWIFSIIIRPLFESFNGMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSSSSSSS
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72939..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91618))
location: region:72939-91618:-1
so has part: feature:91323-91618:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72939-73078:-1:exon

XP_039419041.1
type: Protein
SIO_000068: ncbiprotein

position:72939:-1
position: 72939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91618:-1
position: 91618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72939-73078:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X3
translation: MVSSPHSDSLPRRRHHRAEPEPADPRSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLRLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTREGEISSPKRDEDVWRPTEKWCNQLFCNVVPMLLGDEEEEERGSRQHFDLDAFLSDISDTLFTMTQMPSTHQALPEDVYVGNADMIQPDLAPLQPSLDDMDISGLLMPVTVSPLGPAEMFTGHRPPPSQTQPGYQDPSCFLPTAEPLFSSGASLMGAQGLPASPEAQLLPGTLLQPSGASQLSLHSAFLGSERPLAPLPPEPPNVAPSSLSPQLRHKPTLQYDLPGKCLSLEPPAPHYVPPIQCPRAPLLSPEPPFSPASAPRSKFPYASSPDPSLVTHPASPLSSPCFTPYIPGLGCATGMGTQGYPSPAASQLLPPALLGNPRFAPHKGLPQGGGGRPKAKPSGTKARRLPGQPLSHLPEPNPCPSQLLTAAKQDLALDTPRPMDAGLMPPAPVSPQQSTVPKVPATFFSRMAQMSPGLAPGSSPSQVVLHTVGTQPGPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSLSLHHPMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTMLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQHLREQIEELNGSINLCQEQLPATGVPITRQRFDHMRRMFDEYVRSSTLQNWKFWIFSIIIRPLFESFNGMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSSSSSSS
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72939..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91453))
location: region:72939-91453:-1
so has part: feature:91323-91453:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72939-73078:-1:exon

XP_039419043.1
type: Protein
SIO_000068: ncbiprotein

position:91453:-1
position: 91453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72939-73078:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X4
translation: MSLEYSGKLVSPKWKNFKGLRLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTREGEISSPKRDEDVWRPTEKWCNQLFCNVVPMLLGDEEEEERGSRQHFDLDAFLSDISDTLFTMTQMPSTHQALPEDVYVGNADMIQPDLAPLQPSLDDMDISGLLMPVTVSPLGPAEMFTGHRPPPSQTQPGYQDPSCFLPTAEPLFSSGASLMGAQGLPASPEAQLLPGTLLQPSGASQLSLHSAFLGSERPLAPLPPEPPNVAPSSLSPQLRHKPTLQYDLPGKCLSLEPPAPHYVPPIQCPRAPLLSPEPPFSPASAPRSKFPYASSPDPSLVTHPASPLSSPCFTPYIPGLGCATGMGTQGYPSPAASQLLPPALLGNPRFAPHKGLPQGGGGRPKAKPSGTKARRLPGQPLSHLPEPNPCPSQLLTAAKQDLALDTPRPMDAGLMPPAPVSPQQSTVPKVPATFFSRMAQMSPGLAPGSSPSQVVLHTVGTQPGPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSLSLHHPMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTMLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQHLREQIEELNGSINLCQEQLPATGVPITRQRFDHMRRMFDEYVRSSTLQNWKFWIFSIIIRPLFESFNGMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSSSSSSS
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72939..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78624,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91339))
location: region:72939-91339:-1
so has part: feature:91323-91339:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78624:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72939-73078:-1:exon

XP_039419044.1
type: Protein
SIO_000068: ncbiprotein

position:91339:-1
position: 91339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72939-73078:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X5
translation: MGWILLQTTVSKGNVPSCSDHVQCLSQGTLLELGRVPSPAVAPGLPGWCVLGQSSIPWGAWRPVGVSFVLDGAAPWAMCYIEHCARHVPLGLWGEETGMLGASQPNYVPKSHFCHTQAGQAMAFHGLGARIAQQPRAGLHRAGMRGGHHGVTGLSLCRVVRQSSVPVSQRLQTNPQMRKHLVSVAGTGVWYEADGEVLMAEAREQLDPVPCCHHAPEMFTGHRPPPSQTQPGYQDPSCFLPTAEPLFSSGASLMGAQGLPASPEAQLLPGTLLQPSGASQLSLHSAFLGSERPLAPLPPEPPNVAPSSLSPQLRHKPTLQYDLPGKCLSLEPPAPHYVPPIQCPRAPLLSPEPPFSPASAPRSKFPYASSPDPSLVTHPASPLSSPCFTPYIPGLGCATGMGTQGYPSPAASQLLPPALLGNPRFAPHKGLPQGGGGRPKAKPSGTKARRLPGQPLSHLPEPNPCPSQLLTAAKQDLALDTPRPMDAGLMPPAPVSPQQSTVPKVPATFFSRMAQMSPGLAPGSSPSQVVLHTVGTQPGPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSLSLHHPMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTMLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQHLREQIEELNGSINLCQEQLPATGVPITRQRFDHMRRMFDEYVRSSTLQNWKFWIFSIIIRPLFESFNGMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSSSSSSS
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(72939..73078,73466..73595,74712..74835,75126..75253,75458..75577,75740..75852,76489..76663,77048..77121,77736..78330,78410..78582,80409..81057))
location: region:72939-81057:-1
so has part: feature:80409-81057:-1:exon
so has part: feature:78410-78582:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76663:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74712-74835:-1:exon
so has part: feature:73466-73595:-1:exon
so has part: feature:72939-73078:-1:exon

XP_039419045.1
type: Protein
SIO_000068: ncbiprotein

position:81057:-1
position: 81057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80409-81057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78410-78582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76489-76663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74712-74835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:73466-73595:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:72939-73078:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MLXIPL
product: MLX interacting protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_039563108.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(73502..74835,75126..75253,75458..75577,75740..75852,76489..76660,77048..77121,77736..78330,78410..78582,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91819))
location: region:73502-91819:-1
so has part: feature:91323-91819:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78582:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76660:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:73502-74835:-1:exon

position:73502:-1
position: 73502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76660:-1:exon

position:76660:-1
position: 76660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73502-74835:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X2
translation: MAGAQVGLPGPFLEPPVGPCPVSDSDSDSEDAAVGGTGPSAGAQNSSQVIHSGHFMVSSPHSDSLPRRRHHRAEPEPADPRSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLRLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTREGEISSPKRDEDVWRPTEKWCNQLFCNVVPMLLGDEEEEERGSRQHFDLDAFLSDISDTLFTMTQMPSTHQALPEDVYVGNADMIQPDLAPLQPSLDDMDISEMFTGHRPPPSQTQPGYQDPSCFLPTAEPLFSSGASLMGAQGLPASPEAQLLPGTLLQPSGASQLSLHSAFLGSERPLAPLPPEPPNVAPSSLSPQLRHKPTLQYDLPGKCLSLEPPAPHYVPPIQCPRAPLLSPEPPFSPASAPRSKFPYASSPDPSLVTHPASPLSSPCFTPYIPGLGCATGMGTQGYPSPAASQLLPPALLGNPRFAPHKGLPQGGGGRPKAKPSGTKARRLPGQPLSHLPEPNPCPSQLLTAAKQDLALDTPRPMDAGLMPPAPVSPQSTVPKVPATFFSRMAQMSPGLAPGSSPSQVVLHTVGTQPGPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSLSLHHPMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTMLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQHLREQIEELNGSINLCQEQLPATGVPITRQRFDHMRRMFDEYVRSSTLQNWKFWIVSFGACARCSLRPSTRHKVLWFICCYWVFGVPQAREDLRDLETTGRCFPAKVTW
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(74547..74835,75126..75253,75458..75577,75740..75852,76489..76660,77048..77121,77736..78330,78410..78582,82418..82495,83157..83358,83654..83698,83925..84014,84205..84287,84427..84533,91323..91618))
location: region:74547-91618:-1
so has part: feature:91323-91618:-1:exon
so has part: feature:84427-84533:-1:exon
so has part: feature:84205-84287:-1:exon
so has part: feature:83925-84014:-1:exon
so has part: feature:83654-83698:-1:exon
so has part: feature:83157-83358:-1:exon
so has part: feature:82418-82495:-1:exon
so has part: feature:78410-78582:-1:exon
so has part: feature:77736-78330:-1:exon
so has part: feature:77048-77121:-1:exon
so has part: feature:76489-76660:-1:exon
so has part: feature:75740-75852:-1:exon
so has part: feature:75458-75577:-1:exon
so has part: feature:75126-75253:-1:exon
so has part: feature:74547-74835:-1:exon

XP_039419042.1
type: Protein
SIO_000068: ncbiprotein

position:74547:-1
position: 74547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91323-91618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84427-84533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84205-84287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83925-84014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83654-83698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83157-83358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82418-82495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78410-78582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77736-78330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77048-77121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76489-76660:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75740-75852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75458-75577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75126-75253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74547-74835:-1:exon

LOC104695790
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97195..113930)
location: region:97195-113930:-1
so has part: feature:97195-113930:-1:exon
subclass of: SO_0000010

104695790
type: Gene
SIO_000068: ncbigene

position:97195:-1
position: 97195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113930:-1
position: 113930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97195-113930:-1:exon

LOC104695790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695790
product: fibrinogen-like protein 1-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_039562863.1
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(97195..98716,99318..99383,100858..101001,101230..101368,106357..106451,113740..113930))
location: region:97195-113930:-1
so has part: feature:113740-113930:-1:exon
so has part: feature:106357-106451:-1:exon
so has part: feature:101230-101368:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:97195-98716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113740-113930:-1:exon

position:113740:-1
position: 113740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106357-106451:-1:exon

position:106357:-1
position: 106357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106451:-1
position: 106451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101230-101368:-1:exon

position:101230:-1
position: 101230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101368:-1
position: 101368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100858-101001:-1:exon

position:100858:-1
position: 100858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101001:-1
position: 101001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:99318-99383:-1:exon

position:99318:-1
position: 99318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99383:-1
position: 99383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97195-98716:-1:exon

position:98716:-1
position: 98716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695790
product: fibrinogen-like protein 1-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019292113.3
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(97195..98716,99318..99383,100858..101001,101230..101368,106357..106451,113608..113733))
location: region:97195-113733:-1
so has part: feature:113608-113733:-1:exon
so has part: feature:106357-106451:-1:exon
so has part: feature:101230-101368:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:97195-98716:-1:exon

position:113733:-1
position: 113733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113608-113733:-1:exon

position:113608:-1
position: 113608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106357-106451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101230-101368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97195-98716:-1:exon

LOC104695790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695790
product: fibrinogen-like protein 1-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019292112.3
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(97195..98716,99318..99383,100858..101001,101230..101368,106357..106451,111770..113733))
location: region:97195-113733:-1
so has part: feature:111770-113733:-1:exon
so has part: feature:106357-106451:-1:exon
so has part: feature:101230-101368:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:97195-98716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111770-113733:-1:exon

position:111770:-1
position: 111770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106357-106451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101230-101368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97195-98716:-1:exon

LOC104695790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695790
product: fibrinogen-like protein 1-like protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010409802.4
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(97195..98716,99318..99383,100858..101001,106357..113186))
location: region:97195-113186:-1
so has part: feature:106357-113186:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:97195-98716:-1:exon

position:113186:-1
position: 113186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106357-113186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97195-98716:-1:exon

LOC104695790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein isoform X1
translation: MAARHYSPLFFTSMLALVSPLLALHIENLERLKADLDEIINIHSDGPLPDEAGGIIQQNQAADPRQAQSHRSWPKDCSELPASSSSGIYIIQPTGMQTIVVYCEMSRENGGWTVIQRNHRDTPVSWDESWSTYKHGFGNVHTEFWLGTEYIHQITRQKVYQVRFAIWDASNNMKFADYNLFSLGDESQGYQLRLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRDQDTSSGNCATSSGGGWWYSACYSVRLNFRGGMTWGSLCQGNCRASAILIKPTTYC
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(98088..98716,99318..99383,100858..101001,101230..101233))
location: region:98088-101233:-1
so has part: feature:101230-101233:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:98088-98716:-1:exon

XP_039418797.1
type: Protein
SIO_000068: ncbiprotein

position:98088:-1
position: 98088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101233:-1
position: 101233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101230-101233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98088-98716:-1:exon

LOC104695790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein isoform X1
translation: MAARHYSPLFFTSMLALVSPLLALHIENLERLKADLDEIINIHSDGPLPDEAGGIIQQNQAADPRQAQSHRSWPKDCSELPASSSSGIYIIQPTGMQTIVVYCEMSRENGGWTVIQRNHRDTPVSWDESWSTYKHGFGNVHTEFWLGTEYIHQITRQKVYQVRFAIWDASNNMKFADYNLFSLGDESQGYQLRLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRDQDTSSGNCATSSGGGWWYSACYSVRLNFRGGMTWGSLCQGNCRASAILIKPTTYC
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(98088..98716,99318..99383,100858..101001,101230..101233))
location: region:98088-101233:-1
so has part: feature:101230-101233:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:98088-98716:-1:exon

XP_019147657.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101230-101233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98088-98716:-1:exon

LOC104695790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein isoform X1
translation: MAARHYSPLFFTSMLALVSPLLALHIENLERLKADLDEIINIHSDGPLPDEAGGIIQQNQAADPRQAQSHRSWPKDCSELPASSSSGIYIIQPTGMQTIVVYCEMSRENGGWTVIQRNHRDTPVSWDESWSTYKHGFGNVHTEFWLGTEYIHQITRQKVYQVRFAIWDASNNMKFADYNLFSLGDESQGYQLRLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRDQDTSSGNCATSSGGGWWYSACYSVRLNFRGGMTWGSLCQGNCRASAILIKPTTYC
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(98088..98716,99318..99383,100858..101001,101230..101233))
location: region:98088-101233:-1
so has part: feature:101230-101233:-1:exon
so has part: feature:100858-101001:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:98088-98716:-1:exon

XP_019147658.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101230-101233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100858-101001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98088-98716:-1:exon

LOC104695790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein isoform X2
translation: MLALVSPLLALHIENLERLKADLDEIINIHSDGPLPDEAGGIIQQNQAADPRQAQSHRSWPKDCSELPASSSSGIYIIQPTGMQTIVVYCEMSRENGGWTVIQRNHRDTPVSWDESWSTYKHGFGNVHTEFWLGTEYIHQITRQKVYQVRFAIWDASNNMKFADYNLFSLGDESQGYQLRLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRDQDTSSGNCATSSGGGWWYSACYSVRLNFRGGMTWGSLCQGNCRASAILIKPTTYC
SIO_010081: LOC104695790
subclass of: SO_0000673
so part of: LOC104695790
location: complement(join(98088..98716,99318..99383,100858..100966))
location: region:98088-100966:-1
so has part: feature:100858-100966:-1:exon
so has part: feature:99318-99383:-1:exon
so has part: feature:98088-98716:-1:exon

XP_010408104.3
type: Protein
SIO_000068: ncbiprotein

position:100966:-1
position: 100966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100858-100966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99318-99383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98088-98716:-1:exon

LOC109146006
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(104707..105755)
location: region:104707-105755:-1
so has part: feature:104707-105755:-1:exon
subclass of: SO_0000010

109146006
type: Gene
SIO_000068: ncbigene

position:104707:-1
position: 104707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105755:-1
position: 105755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104707-105755:-1:exon

LOC109146006
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC109146006
product: fibrinogen-like protein 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020584184.2
SIO_010081: LOC109146006
subclass of: SO_0000673
so part of: LOC109146006
location: complement(104707..105755)
location: region:104707-105755:-1
so has part: feature:104707-105755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104707-105755:-1:exon

LOC109146006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC109146006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein
translation: MVYSEMNGADRAVIQRNHQSSAILWNESWSTYKYSFGNGHTEFGWAPSTSTRSPGRRSTIWVRFAIWDASNDMKFADYNLFSLGDESQGYQLWLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRGQDTSSGNCATSSGAN
SIO_010081: LOC109146006
subclass of: SO_0000673
so part of: LOC109146006
location: complement(105174..105596)
location: region:105174-105596:-1
so has part: feature:105174-105596:-1:exon

XP_020439773.2
type: Protein
SIO_000068: ncbiprotein

position:105174:-1
position: 105174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105596:-1
position: 105596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105174-105596:-1:exon

BAZ1B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: BAZ1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 114259..158463
location: region:114259-158463:1
so has part: feature:114259-158463:1:exon
subclass of: SO_0000010

104695789
type: Gene
SIO_000068: ncbigene

position:114259:1
position: 114259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158463:1
position: 158463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114259-158463:1:exon

BAZ1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: BAZ1B
product: bromodomain adjacent to zinc finger domain 1B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039562762.1
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(114259..114489,120977..121093,123198..123342,124129..124327,128177..128298,129095..129292,130440..132135,133487..133625,134104..134234,135536..135647,142107..142205,142622..142799,143247..143432,147540..147687,149226..149373,151533..151651,153932..154080,155748..155851,156383..158463)
location: region:114259-158463:1
so has part: feature:114259-114489:1:exon
so has part: feature:120977-121093:1:exon
so has part: feature:123198-123342:1:exon
so has part: feature:124129-124327:1:exon
so has part: feature:128177-128298:1:exon
so has part: feature:129095-129292:1:exon
so has part: feature:130440-132135:1:exon
so has part: feature:133487-133625:1:exon
so has part: feature:134104-134234:1:exon
so has part: feature:135536-135647:1:exon
so has part: feature:142107-142205:1:exon
so has part: feature:142622-142799:1:exon
so has part: feature:143247-143432:1:exon
so has part: feature:147540-147687:1:exon
so has part: feature:149226-149373:1:exon
so has part: feature:151533-151651:1:exon
so has part: feature:153932-154080:1:exon
so has part: feature:155748-155851:1:exon
so has part: feature:156383-158463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114259-114489:1:exon

position:114489:1
position: 114489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120977-121093:1:exon

position:120977:1
position: 120977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121093:1
position: 121093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123198-123342:1:exon

position:123198:1
position: 123198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123342:1
position: 123342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124129-124327:1:exon

position:124129:1
position: 124129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124327:1
position: 124327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128177-128298:1:exon

position:128177:1
position: 128177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128298:1
position: 128298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129095-129292:1:exon

position:129095:1
position: 129095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129292:1
position: 129292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:130440-132135:1:exon

position:130440:1
position: 130440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132135:1
position: 132135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133487-133625:1:exon

position:133487:1
position: 133487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133625:1
position: 133625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134104-134234:1:exon

position:134104:1
position: 134104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134234:1
position: 134234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135536-135647:1:exon

position:135536:1
position: 135536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135647:1
position: 135647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:142107-142205:1:exon

position:142107:1
position: 142107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142205:1
position: 142205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:142622-142799:1:exon

position:142622:1
position: 142622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142799:1
position: 142799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:143247-143432:1:exon

position:143247:1
position: 143247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143432:1
position: 143432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147540-147687:1:exon

position:147540:1
position: 147540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147687:1
position: 147687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:149226-149373:1:exon

position:149226:1
position: 149226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149373:1
position: 149373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:151533-151651:1:exon

position:151533:1
position: 151533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151651:1
position: 151651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:153932-154080:1:exon

position:153932:1
position: 153932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154080:1
position: 154080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:155748-155851:1:exon

position:155748:1
position: 155748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155851:1
position: 155851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:156383-158463:1:exon

position:156383:1
position: 156383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAZ1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: BAZ1B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tyrosine-protein kinase BAZ1B
translation: MAPLLGRKPFPXAKPLPPGEPGERFVIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPIWYEKLVLEIVHHNTVSLEKLVDAAWLEIMTKFAVGEECDFEVGKEKMLPVKVVKIHPLEKVDEEASEKKSEEACDSPSSDKENSSQAAQDNQKEAMLKEDDNRRDSMNDRARRSPRKLPASLKKEERKWVPPKFLPHKYDVKLKNEDKIISNVPADSLVRTERPPNKEILRYFIRHNALRAGTCENAPWVVEDELVKKYSLPSKFSDFLLDPHKYMALNPSTKRKSSRSPDRKLPKKSKADGPSLGQPLSPTLWCHVHLEKSIIGSPLKVKNSKNSKCPKEELEEVMKIVSPAKLGSNFHIPKRNRLGKGNNKSLDKKQRGKRVLNGQKSSGKAKSPRKGLKTPKMKMKQMTLLDMAKGTTKVSRAPRNSGGTPGSSRKPQKHLPPAALHLIAYYKENKDREDKKSALSCIISKTARLLSSEDRARLPEDLRGLVQKRYELLEHRKRWATMTEEQRKEYMKKKREKLKEKLKERAKERKEKEMKEKLEKQRRFEDQDLKGKTLPTFKLVDTPEGLPNTLFGDVAMVVEFLSCYSGLLMPDAQYPITAVSLMEALCAEKGGFLYLNRVLVILLQTLLQDEIAEDYAELGMKLSEIPLTLHSASELVRLCLRKSDVQEESEVSDNVDESKDSAAFEDNEVQDEFLEKLETSEFFELTPEEKLQILGALCHRILMTYSVQDHVEAKQQASAELWKERLAVLKEENDKKRAEKQKRKEMVAKIKENGKEEHMMGRNEKKKHEMMKIEHRVEIEADDMISAVKSRRLLAIQAKKEREQQEIQMRVRMEKEAEEERIRRHKAAAEKTFQDGIAKAKLVMRRTPIGTDRNHNRYWLFSDEVPGLFIEKGWVHDSIDYRFTLPHQKKEDSKKDCSPGEKRKSTGSDGRGNKLPRSMPTTDLPAETTTPKQGQNLWFLCDSQKDLDELLDCLHPQGVRESQLKERLEKKYQDITHSIHLARKQNLGLKSCDGSQELLNYLRSDLIEVATRLQKGGLGYVDVTPEYEAKVYSLESLKDFGECVIALQAGVVKKFLQGFMAPKQKRRKHQGEDYIAKAEEIDEDKKMAEEAKVASAMEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPACQPSTARRSSRGRNYAEDSAEDEGEEGEEASDEPDAEEEEEEEEDYEVAGLKLRPRKASRAKQGSMYPSRQGRHQRKKQALHPVRGPRQRTAPVNGADIDELVLQTKRTARRQNLELQKCEEILGKLIKYRFSWPFREPVTTEEAEDYFQVISNPMDFQTMQSKCSCGNYRSVQEFLSDMKQVFSNAERYNQNGSHVLSCLEKTEQCLIDMVHKHLPGHTYVRRKRKKLSARCQGLEEQEGDSESEPLEHSRGRKRKK
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(114378..114489,120977..121093,123198..123342,124129..124327,128177..128298,129095..129292,130440..132135,133487..133625,134104..134234,135536..135647,142107..142205,142622..142799,143247..143432,147540..147687,149226..149373,151533..151651,153932..154080,155748..155851,156383..156749)
location: region:114378-156749:1
so has part: feature:114378-114489:1:exon
so has part: feature:120977-121093:1:exon
so has part: feature:123198-123342:1:exon
so has part: feature:124129-124327:1:exon
so has part: feature:128177-128298:1:exon
so has part: feature:129095-129292:1:exon
so has part: feature:130440-132135:1:exon
so has part: feature:133487-133625:1:exon
so has part: feature:134104-134234:1:exon
so has part: feature:135536-135647:1:exon
so has part: feature:142107-142205:1:exon
so has part: feature:142622-142799:1:exon
so has part: feature:143247-143432:1:exon
so has part: feature:147540-147687:1:exon
so has part: feature:149226-149373:1:exon
so has part: feature:151533-151651:1:exon
so has part: feature:153932-154080:1:exon
so has part: feature:155748-155851:1:exon
so has part: feature:156383-156749:1:exon

XP_039418696.1
type: Protein
SIO_000068: ncbiprotein

position:114378:1
position: 114378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156749:1
position: 156749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114378-114489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120977-121093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123198-123342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124129-124327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128177-128298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129095-129292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130440-132135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133487-133625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134104-134234:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135536-135647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142107-142205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142622-142799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143247-143432:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147540-147687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149226-149373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:151533-151651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153932-154080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:155748-155851:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:156383-156749:1:exon

FZD9
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(162098..164307)
location: region:162098-164307:-1
so has part: feature:162098-164307:-1:exon
subclass of: SO_0000010

120411028
type: Gene
SIO_000068: ncbigene

position:162098:-1
position: 162098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164307:-1
position: 164307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162098-164307:-1:exon

FZD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FZD9
product: frizzled class receptor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563114.1
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(162098..164307)
location: region:162098-164307:-1
so has part: feature:162098-164307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162098-164307:-1:exon

FZD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-9
translation: MAAARLRVALWVLWHFGVGGRGLELAGLEGPRGRAARCQPVDIPMCRGIGYNLTRMPNLLGHESQREAALKLHEFAPLVEYGCHVHLRFFLCSLYAPMCTDQVSASIPACRPMCEQARHKCVPIMEQFNFGWPESLDCGRLPTKNDPNALCMEAPENASAAEPHKGQGMLPVAPRPWPPGTATEGQGPNGLGACDNPEKFQYVEKSLSCAPRCSPGVDVYWSREDKDFAFIWMAVWSTLCFVSTAFTVLTFLLDPHRFQYPERPIIFLSMCYNVYSVAFIIRSVAGAENIACDRENGELYIIQEGLESTGCTIVFLILYYFGMASSLWWVVLTLTWFLAAGKKWGHEAIEAHSSYFHMAAWGIPAMKTIVILTMRKVAGDELTGLCYVGSMDVSALTGFVLIPLSCYLVIGTSFILTGFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIVCYFYERLNMDYWTLRALERGCLRLPGRRAANCSLEASVPTVAVFMLKIFMSLVVGITSGVWVWSSKTLQTWQSLCNRRLGMRTRGKPCSGVSCGGGHCHYKAPTVMLHMTKTDPYLDNPTHV
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(162455..164209)
location: region:162455-164209:-1
so has part: feature:162455-164209:-1:exon

XP_039419048.1
type: Protein
SIO_000068: ncbiprotein

position:162455:-1
position: 162455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164209:-1
position: 164209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162455-164209:-1:exon

FKBP6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179200..199122)
location: region:179200-199122:-1
so has part: feature:179200-199122:-1:exon
subclass of: SO_0000010

104695788
type: Gene
SIO_000068: ncbigene

position:179200:-1
position: 179200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199122:-1
position: 199122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179200-199122:-1:exon

FKBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FKBP6
product: FKBP prolyl isomerase family member 6 (inactive)
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039562883.1
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(179200..179624,190684..190769,194006..194115,194404..194598,195431..195550,196705..196907,197442..197531,198849..199122))
location: region:179200-199122:-1
so has part: feature:198849-199122:-1:exon
so has part: feature:197442-197531:-1:exon
so has part: feature:196705-196907:-1:exon
so has part: feature:195431-195550:-1:exon
so has part: feature:194404-194598:-1:exon
so has part: feature:194006-194115:-1:exon
so has part: feature:190684-190769:-1:exon
so has part: feature:179200-179624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198849-199122:-1:exon

position:198849:-1
position: 198849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197442-197531:-1:exon

position:197442:-1
position: 197442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197531:-1
position: 197531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196705-196907:-1:exon

position:196705:-1
position: 196705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196907:-1
position: 196907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195431-195550:-1:exon

position:195431:-1
position: 195431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195550:-1
position: 195550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194404-194598:-1:exon

position:194404:-1
position: 194404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194598:-1
position: 194598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194006-194115:-1:exon

position:194006:-1
position: 194006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194115:-1
position: 194115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190684-190769:-1:exon

position:190684:-1
position: 190684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190769:-1
position: 190769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179200-179624:-1:exon

position:179624:-1
position: 179624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FKBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FKBP6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MGGVEDIVAGWWDPGPGPGPGLTPTWALALIPAPAPIWALTPASTPSLSVASASLQPLQDLTSDGGVRKEQLRPGTGQPVPPSASVAVKYSGYLGNWNNLFCSNESSKYPRLMKLGKDITLWGLEIGLLSMTKGETALFVLRPEYAYGQRGCPPSIPPNTTVLFKVELLDFIDSEECDAFFELTYEQQDRHPLEKVLKVAATEREFGNYFFYKQRFKIAKSRYKRALSILGRSSSSKAEQSQINASKLLLFLNLSLTYLKMERADRALKYGELALEMDQGNAKALFRCGQACLYLREYRKSHDFLTRAQCIQPFNRDINNELKKLARYYREYMEMEKEVLPSI
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(190718..190769,194006..194115,194404..194598,195431..195550,196705..196907,197442..197531,198849..199111))
location: region:190718-199111:-1
so has part: feature:198849-199111:-1:exon
so has part: feature:197442-197531:-1:exon
so has part: feature:196705-196907:-1:exon
so has part: feature:195431-195550:-1:exon
so has part: feature:194404-194598:-1:exon
so has part: feature:194006-194115:-1:exon
so has part: feature:190718-190769:-1:exon

XP_039418817.1
type: Protein
SIO_000068: ncbiprotein

position:190718:-1
position: 190718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199111:-1
position: 199111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198849-199111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197442-197531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196705-196907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195431-195550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194404-194598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194006-194115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190718-190769:-1:exon

NSUN5
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NSUN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205539..208899
location: region:205539-208899:1
so has part: feature:205539-208899:1:exon
subclass of: SO_0000010

104695811
type: Gene
SIO_000068: ncbigene

position:205539:1
position: 205539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208899:1
position: 208899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205539-208899:1:exon

NSUN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NSUN5
product: NOP2/Sun RNA methyltransferase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_039562882.1
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(205539..205666,205785..205907,206018..206192,206271..206379,206647..206785,207160..207275,207610..207788,207869..208073,208146..208298,208449..208899)
location: region:205539-208899:1
so has part: feature:205539-205666:1:exon
so has part: feature:205785-205907:1:exon
so has part: feature:206018-206192:1:exon
so has part: feature:206271-206379:1:exon
so has part: feature:206647-206785:1:exon
so has part: feature:207160-207275:1:exon
so has part: feature:207610-207788:1:exon
so has part: feature:207869-208073:1:exon
so has part: feature:208146-208298:1:exon
so has part: feature:208449-208899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205539-205666:1:exon

position:205666:1
position: 205666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205785-205907:1:exon

position:205785:1
position: 205785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205907:1
position: 205907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206018-206192:1:exon

position:206018:1
position: 206018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206192:1
position: 206192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206271-206379:1:exon

position:206271:1
position: 206271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206379:1
position: 206379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206647-206785:1:exon

position:206647:1
position: 206647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206785:1
position: 206785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207160-207275:1:exon

position:207160:1
position: 207160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207275:1
position: 207275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207610-207788:1:exon

position:207610:1
position: 207610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207788:1
position: 207788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207869-208073:1:exon

position:207869:1
position: 207869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208073:1
position: 208073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208146-208298:1:exon

position:208146:1
position: 208146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208298:1
position: 208298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208449-208899:1:exon

position:208449:1
position: 208449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NSUN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NSUN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S rRNA (cytosine-C(5))-methyltransferase
translation: MALYSAAAAVLAGLERGEGGLKSLVYNSGFPHVRQLYALVSETLRYASVLEKLLDGAALLQAEKKLPPQLAKVLVYDLLFGKGLKCGGRWKALARRHRARLEAELARMKVRHKVSRNEDLLAPEQAVSPAASQVPRYVRVNTLKTCVDDVIDFFKRQGYTYLGKAASVEELKALSGKKFLLDLHLPELLVFPAQTDLHDNLLYTSGHIILQDKASCLPAFLLGPAAGSHVIDACAAPGNKTSHLAAILKNKGQIFAFDVDPKRVATMNTLLTRAGVTGCQLAQQDFLTVDPRDPKYSRVTHILLDPSCSGSGMVTRGLGQEAAPSAERLQALAGFQRRALNHALSFPALQRLVYSTCSLHQEENEDVVQAVLQEWGSAFRLVTAFPSWPCRGLAAFSGAESCLRASPAETFTHGFFVAVLERCREGAAAPSSLPAVAKENPQPGEGMEPGAAPKKRKKKKQRVKE
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(205574..205666,205785..205907,206018..206192,206271..206379,206647..206785,207160..207275,207610..207788,207869..208073,208146..208298,208449..208554)
location: region:205574-208554:1
so has part: feature:205574-205666:1:exon
so has part: feature:205785-205907:1:exon
so has part: feature:206018-206192:1:exon
so has part: feature:206271-206379:1:exon
so has part: feature:206647-206785:1:exon
so has part: feature:207160-207275:1:exon
so has part: feature:207610-207788:1:exon
so has part: feature:207869-208073:1:exon
so has part: feature:208146-208298:1:exon
so has part: feature:208449-208554:1:exon

XP_039418816.1
type: Protein
SIO_000068: ncbiprotein

position:205574:1
position: 205574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208554:1
position: 208554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205574-205666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205785-205907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206018-206192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206271-206379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206647-206785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207160-207275:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207610-207788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207869-208073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208146-208298:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208449-208554:1:exon

POM121
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: POM121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209120..221766)
location: region:209120-221766:-1
so has part: feature:209120-221766:-1:exon
subclass of: SO_0000010

104695810
type: Gene
SIO_000068: ncbigene

position:209120:-1
position: 209120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221766:-1
position: 221766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209120-221766:-1:exon

POM121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: POM121
product: POM121 transmembrane nucleoporin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039562876.1
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(209120..211476,211689..211817,212650..214410,214726..214896,215169..215271,215672..215796,216506..216576,217344..217435,218381..218552,218853..218933,221066..221230,221495..221766))
location: region:209120-221766:-1
so has part: feature:221495-221766:-1:exon
so has part: feature:221066-221230:-1:exon
so has part: feature:218853-218933:-1:exon
so has part: feature:218381-218552:-1:exon
so has part: feature:217344-217435:-1:exon
so has part: feature:216506-216576:-1:exon
so has part: feature:215672-215796:-1:exon
so has part: feature:215169-215271:-1:exon
so has part: feature:214726-214896:-1:exon
so has part: feature:212650-214410:-1:exon
so has part: feature:211689-211817:-1:exon
so has part: feature:209120-211476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221495-221766:-1:exon

position:221495:-1
position: 221495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221066-221230:-1:exon

position:221066:-1
position: 221066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221230:-1
position: 221230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218853-218933:-1:exon

position:218853:-1
position: 218853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218933:-1
position: 218933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218381-218552:-1:exon

position:218381:-1
position: 218381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218552:-1
position: 218552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:217344-217435:-1:exon

position:217344:-1
position: 217344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217435:-1
position: 217435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216506-216576:-1:exon

position:216506:-1
position: 216506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216576:-1
position: 216576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215672-215796:-1:exon

position:215672:-1
position: 215672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215796:-1
position: 215796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215169-215271:-1:exon

position:215169:-1
position: 215169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215271:-1
position: 215271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:214726-214896:-1:exon

position:214726:-1
position: 214726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214896:-1
position: 214896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:212650-214410:-1:exon

position:212650:-1
position: 212650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214410:-1
position: 214410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:211689-211817:-1:exon

position:211689:-1
position: 211689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211817:-1
position: 211817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:209120-211476:-1:exon

position:211476:-1
position: 211476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POM121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: POM121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope pore membrane protein POM 121
translation: MGVGRAGKLQIASEVLTALCPRRAPRCRPQAPRRRYPLPQTRPAVPLCLSAARWEGGSPRSAPWARRACPLRSPVTVRIAPPAVGIARSPALEQLVSPPAFPATSSPDPCAKETVLNAIRESRKRAVEEEEEEDQTFGNDQESKRRRHDSSGSGQSAFEPLVANGAPASLIPKPGSLKRGLISHCPDDCSNKRSRTSSMSSLNNTYAGGIPSSIRNAIASSYSSSRGLAQLWKRSGVSVSPLSSPASSRPQTPEWPLKKAREEESLRSNASTPVKSDKELQTEKVVESPVWKKQNSLSPPSASGSSGKRKRKIPLLSSLRGDQLVLPPPPQLGYSITSEDLDAEKKAVLQWFNSLLEDKADAVPSTTAETVPVSKPLAFAVTSPGPMPASTAPAPASSSLLDSLKKMQSSQAVSTASDSTGAVAASQPPPSAAQPPAPAVSLESSSLPAISADTKPMPVLSTPAPSAPPALAVQPPSSLAPPVFTDLGQTPSKPPSFPKPSILFGMLNTPPASQPAVTVAAATPTTATATLTASTAVPTAATAVPTPPTAMPTTTPIFKPIFGAVPKSESTAACTAVTSTTATVSASSGPASTSSTSSIFKPIFGSITAASSPAKVSPFAFKPVAQPASEPPTASTATLAGFTGLPNVIFTTAATTATTQSSSTDATIKPVFSFGLNPPASTGPAASVTLTTATSTSTTQPFLFGGLASSAPSTETSFATPGPVFQFGKAPPATVTATTSVPGGPAFGQVPSNSTVAATTVGFSIFGSTTLTSSAPATTAQAPLTFGSSVSAFGSSFSASAKPPPPYPSTGGQLTFSTGAADSQVPASKPAAGPISFTPQFSFGAPPAQSVAQPAFGSGAQPAFGTTSAQGSFGTSSTQAAFGTTTSVFSFGTATSTTSSFGSTTQTTSSSTGAAVFGTTPSPFTFGATTQSGPSTSAFGMGTPGLSSGSPAVAFSFGAGQSGAAPAAAPFGSSLPQSALGAQGQSTPFAFTMTSTPNSKPAFGGAPVPTFGQSTPVPGAVGSGSSTISFRTPSTPASSFGGVGTSFGSSTPTFSIGAGSKMGTRQRLQARRQHTRKK
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(211382..211476,211689..211817,212650..214410,214726..214896,215169..215271,215672..215796,216506..216576,217344..217435,218381..218552,218853..218933,221066..221230,221495..221766))
location: region:211382-221766:-1
so has part: feature:221495-221766:-1:exon
so has part: feature:221066-221230:-1:exon
so has part: feature:218853-218933:-1:exon
so has part: feature:218381-218552:-1:exon
so has part: feature:217344-217435:-1:exon
so has part: feature:216506-216576:-1:exon
so has part: feature:215672-215796:-1:exon
so has part: feature:215169-215271:-1:exon
so has part: feature:214726-214896:-1:exon
so has part: feature:212650-214410:-1:exon
so has part: feature:211689-211817:-1:exon
so has part: feature:211382-211476:-1:exon

XP_039418810.1
type: Protein
SIO_000068: ncbiprotein

position:211382:-1
position: 211382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221495-221766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221066-221230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218853-218933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218381-218552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217344-217435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216506-216576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215672-215796:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215169-215271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214726-214896:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212650-214410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:211689-211817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211382-211476:-1:exon

HIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223702..267827)
location: region:223702-267827:-1
so has part: feature:223702-267827:-1:exon
subclass of: SO_0000010

104695809
type: Gene
SIO_000068: ncbigene

position:223702:-1
position: 223702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267827:-1
position: 267827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223702-267827:-1:exon

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_039562878.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(223702..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,267683..267827))
location: region:223702-267827:-1
so has part: feature:267683-267827:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229750:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:223702-225615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267683-267827:-1:exon

position:267683:-1
position: 267683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

position:239060:-1
position: 239060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239123:-1
position: 239123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238350-238492:-1:exon

position:238350:-1
position: 238350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238492:-1
position: 238492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

position:237714:-1
position: 237714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237770:-1
position: 237770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

position:237188:-1
position: 237188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237268:-1
position: 237268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236433-236509:-1:exon

position:236433:-1
position: 236433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236509:-1
position: 236509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

position:236119:-1
position: 236119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236180:-1
position: 236180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

position:234746:-1
position: 234746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234886:-1
position: 234886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

position:234304:-1
position: 234304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234361:-1
position: 234361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

position:233428:-1
position: 233428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233503:-1
position: 233503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

position:232837:-1
position: 232837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232968:-1
position: 232968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

position:232110:-1
position: 232110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232207:-1
position: 232207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

position:231890:-1
position: 231890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231962:-1
position: 231962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

position:231351:-1
position: 231351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231534:-1
position: 231534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

position:231168:-1
position: 231168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231256:-1
position: 231256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:230961-231077:-1:exon

position:230961:-1
position: 230961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231077:-1
position: 231077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:230772-230873:-1:exon

position:230772:-1
position: 230772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230873:-1
position: 230873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

position:229872:-1
position: 229872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230066:-1
position: 230066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229750:-1:exon

position:229603:-1
position: 229603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229750:-1
position: 229750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

position:229425:-1
position: 229425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229511:-1
position: 229511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:229211-229318:-1:exon

position:229211:-1
position: 229211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229318:-1
position: 229318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

position:228610:-1
position: 228610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228746:-1
position: 228746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

position:228393:-1
position: 228393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228503:-1
position: 228503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

position:228216:-1
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reference: sequence
type: ReverseStrandPosition
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position:228274:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

position:228013:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228106:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227652:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:227439:-1
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urn:…
SIO_000300: 28
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227205:-1
position: 227205
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:226596:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

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reference: sequence
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position:226026:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:223702-225615:-1:exon

position:225615:-1
position: 225615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039562879.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(223702..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229690,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,258424..259110))
location: region:223702-259110:-1
so has part: feature:258424-259110:-1:exon
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so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
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so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
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so has part: feature:230961-231077:-1:exon
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so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229690:-1:exon
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so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:223702-225615:-1:exon

position:259110:-1
position: 259110
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:258424-259110:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

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SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

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SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

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SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229690:-1:exon

position:229690:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:223702-225615:-1:exon

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039562877.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(223702..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,258424..259107))
location: region:223702-259107:-1
so has part: feature:258424-259107:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229750:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:223702-225615:-1:exon

position:259107:-1
position: 259107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258424-259107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

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SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

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SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:223702-225615:-1:exon

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_039562880.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(223702..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,246094..246174))
location: region:223702-246174:-1
so has part: feature:246094-246174:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
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so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
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so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
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so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:223702-225615:-1:exon

position:246174:-1
position: 246174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246094-246174:-1:exon

position:246094:-1
position: 246094
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
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urn:…
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urn:…
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SIO_000628: feature:231890-231962:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 20
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urn:…
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urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:223702-225615:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X2
translation: MDRVSSTMKQVSNPLPKVLSRRAGGGGLEAERESFERAQTVSINKAINAQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMDTASQSLFDNKFDDIFGSSFSCDPFNFNSQNGMSKDDKDRLIEQLYGEIAGLKEELENFKAESTRGAVQLRGRASELEAELAEQQHLKQQAQDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRLSEQAQRKSQEQAEVLETLKRELAASKQELQVVQGTLESSTQAGAEQNTRIASLEQERDRLSRAAEQHRDEMAALQAELQQLQDTLSSEQENSRTELETLQTQLRDKESTERALQQRLAQEQLSLLQGTAREAERMVQDALTRMEDPAHISCTGSADCLLSRTLAASECAERLRDAHSKYLLDGAAVGSLLPCLALFAHLVSDTLLQGSATSHVAPVEPADRLLELCKQCGSAAVSYLSALQDPGTVASADCSLVTACLGQISAIGEELRPRGLDVRQEELGDLVDKEMAATAAAIETASARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIHVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGTFEELMVCSREIAASTAQLVAASKVKADKDSANLCKLQQASRGVNQATASVVASTKAGKSQVEEKDSMDFSGMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDAAD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(225605..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,267683..267799))
location: region:225605-267799:-1
so has part: feature:267683-267799:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229750:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:225605-225615:-1:exon

XP_039418812.1
type: Protein
SIO_000068: ncbiprotein

position:225605:-1
position: 225605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267799:-1
position: 267799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267683-267799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238350-238492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236433-236509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230961-231077:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230772-230873:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229211-229318:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:225605-225615:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X3
translation: MKCSDSLQGLAASAEVNTCLERAKVGIPEFAEVYGHLELAQSILSCWDSWNRCQTVSINKAINAQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMDTASQSLFDNKFDDIFGSSFSCDPFNFNSQNGMSKDDKDRLIEQLYGEIAGLKEELENFKAESTRGAVQLRGRASELEAELAEQQHLKQQAQDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRLSEQAQRKSQEQAEVLETLKRELAASKQELQVVQGTLESSTQAGAEQNTRIASLEQERDRLSRAAEQHRDEMAALQAELQQLQDTLSSEQENSRTELETLQTQLRDKGTAREAERMVQDALTRMEDPAHISCTGSADCLLSRTLAASECAERLRDAHSKYLLDGAAVGSLLPCLALFAHLVSDTLLQGSATSHVAPVEPADRLLELCKQCGSAAVSYLSALQDPGTVASADCSLVTACLGQISAIGEELRPRGLDVRQEELGDLVDKEMAATAAAIETASARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIHVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGTFEELMVCSREIAASTAQLVAASKVKADKDSANLCKLQQASRGVNQATASVVASTKAGKSQVEEKDSMDFSGMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDAAD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(225605..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229690,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,258424..258585))
location: region:225605-258585:-1
so has part: feature:258424-258585:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229690:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:225605-225615:-1:exon

XP_039418813.1
type: Protein
SIO_000068: ncbiprotein

position:258585:-1
position: 258585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258424-258585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238350-238492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236433-236509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230961-231077:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230772-230873:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229690:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229211-229318:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:225605-225615:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X1
translation: MKCSDSLQGLAASAEVNTCLERAKVGIPEFAEVYGHLELAQSILSCWDSWNRCQTVSINKAINAQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMDTASQSLFDNKFDDIFGSSFSCDPFNFNSQNGMSKDDKDRLIEQLYGEIAGLKEELENFKAESTRGAVQLRGRASELEAELAEQQHLKQQAQDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRLSEQAQRKSQEQAEVLETLKRELAASKQELQVVQGTLESSTQAGAEQNTRIASLEQERDRLSRAAEQHRDEMAALQAELQQLQDTLSSEQENSRTELETLQTQLRDKESTERALQQRLAQEQLSLLQGTAREAERMVQDALTRMEDPAHISCTGSADCLLSRTLAASECAERLRDAHSKYLLDGAAVGSLLPCLALFAHLVSDTLLQGSATSHVAPVEPADRLLELCKQCGSAAVSYLSALQDPGTVASADCSLVTACLGQISAIGEELRPRGLDVRQEELGDLVDKEMAATAAAIETASARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIHVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGTFEELMVCSREIAASTAQLVAASKVKADKDSANLCKLQQASRGVNQATASVVASTKAGKSQVEEKDSMDFSGMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDAAD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(225605..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,258424..258585))
location: region:225605-258585:-1
so has part: feature:258424-258585:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229750:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:225605-225615:-1:exon

XP_039418811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258424-258585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238350-238492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236433-236509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230961-231077:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230772-230873:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229211-229318:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:225605-225615:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X4
translation: MELGKVTVSINKAINAQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMDTASQSLFDNKFDDIFGSSFSCDPFNFNSQNGMSKDDKDRLIEQLYGEIAGLKEELENFKAESTRGAVQLRGRASELEAELAEQQHLKQQAQDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRLSEQAQRKSQEQAEVLETLKRELAASKQELQVVQGTLESSTQAGAEQNTRIASLEQERDRLSRAAEQHRDEMAALQAELQQLQDTLSSEQENSRTELETLQTQLRDKESTERALQQRLAQEQLSLLQGTAREAERMVQDALTRMEDPAHISCTGSADCLLSRTLAASECAERLRDAHSKYLLDGAAVGSLLPCLALFAHLVSDTLLQGSATSHVAPVEPADRLLELCKQCGSAAVSYLSALQDPGTVASADCSLVTACLGQISAIGEELRPRGLDVRQEELGDLVDKEMAATAAAIETASARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIHVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGTFEELMVCSREIAASTAQLVAASKVKADKDSANLCKLQQASRGVNQATASVVASTKAGKSQVEEKDSMDFSGMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDAAD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(225605..225615,225915..226026,226535..226596,227082..227205,227334..227439,227552..227652,228013..228106,228216..228274,228393..228503,228610..228746,229211..229318,229425..229511,229603..229750,229872..230066,230772..230873,230961..231077,231168..231256,231351..231534,231890..231962,232110..232207,232837..232968,233428..233503,234304..234361,234746..234886,236119..236180,236433..236509,237188..237268,237714..237770,238350..238492,239060..239123,246094..246111))
location: region:225605-246111:-1
so has part: feature:246094-246111:-1:exon
so has part: feature:239060-239123:-1:exon
so has part: feature:238350-238492:-1:exon
so has part: feature:237714-237770:-1:exon
so has part: feature:237188-237268:-1:exon
so has part: feature:236433-236509:-1:exon
so has part: feature:236119-236180:-1:exon
so has part: feature:234746-234886:-1:exon
so has part: feature:234304-234361:-1:exon
so has part: feature:233428-233503:-1:exon
so has part: feature:232837-232968:-1:exon
so has part: feature:232110-232207:-1:exon
so has part: feature:231890-231962:-1:exon
so has part: feature:231351-231534:-1:exon
so has part: feature:231168-231256:-1:exon
so has part: feature:230961-231077:-1:exon
so has part: feature:230772-230873:-1:exon
so has part: feature:229872-230066:-1:exon
so has part: feature:229603-229750:-1:exon
so has part: feature:229425-229511:-1:exon
so has part: feature:229211-229318:-1:exon
so has part: feature:228610-228746:-1:exon
so has part: feature:228393-228503:-1:exon
so has part: feature:228216-228274:-1:exon
so has part: feature:228013-228106:-1:exon
so has part: feature:227552-227652:-1:exon
so has part: feature:227334-227439:-1:exon
so has part: feature:227082-227205:-1:exon
so has part: feature:226535-226596:-1:exon
so has part: feature:225915-226026:-1:exon
so has part: feature:225605-225615:-1:exon

XP_039418814.1
type: Protein
SIO_000068: ncbiprotein

position:246111:-1
position: 246111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246094-246111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239060-239123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238350-238492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237714-237770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237188-237268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236433-236509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234746-234886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234304-234361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233428-233503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232837-232968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232110-232207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231890-231962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231351-231534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231168-231256:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230961-231077:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230772-230873:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229872-230066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229603-229750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229425-229511:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229211-229318:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228610-228746:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228393-228503:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228216-228274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228013-228106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227552-227652:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:227334-227439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:227082-227205:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:226535-226596:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:225915-226026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:225605-225615:-1:exon

LOC109146010
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 245021..251532
location: region:245021-251532:1
so has part: feature:245021-251532:1:exon
subclass of: SO_0000011

109146010
type: Gene
SIO_000068: ncbigene

position:245021:1
position: 245021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251532:1
position: 251532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245021-251532:1:exon

LOC109146010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146010
product: uncharacterized LOC109146010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002047764.2
SIO_010081: LOC109146010
subclass of: SO_0000673
so part of: LOC109146010
location: join(245021..245709,250326..251532)
location: region:245021-251532:1
so has part: feature:245021-245709:1:exon
so has part: feature:250326-251532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245021-245709:1:exon

position:245709:1
position: 245709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250326-251532:1:exon

position:250326:1
position: 250326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695786
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 276995..279403
location: region:276995-279403:1
so has part: feature:276995-279403:1:exon
subclass of: SO_0000010

104695786
type: Gene
SIO_000068: ncbigene

position:276995:1
position: 276995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279403:1
position: 279403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276995-279403:1:exon

LOC104695786
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695786
product: C-C motif chemokine 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010409796.4
SIO_010081: LOC104695786
subclass of: SO_0000673
so part of: LOC104695786
location: join(276995..278196,278467..278581,279056..279403)
location: region:276995-279403:1
so has part: feature:276995-278196:1:exon
so has part: feature:278467-278581:1:exon
so has part: feature:279056-279403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276995-278196:1:exon

position:278196:1
position: 278196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278467-278581:1:exon

position:278467:1
position: 278467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278581:1
position: 278581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279056-279403:1:exon

position:279056:1
position: 279056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695786
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 5-like
translation: MKTFTTALAVLFVAVFCYQAASSPISLNFYGPCCVEYITRPLPLSLVVKYEHTGRHCSPPAVIFTTVKNKLVCANLNDKWVQDIMNQLKDNEHSG
SIO_010081: LOC104695786
subclass of: SO_0000673
so part of: LOC104695786
location: join(278124..278196,278467..278581,279056..279155)
location: region:278124-279155:1
so has part: feature:278124-278196:1:exon
so has part: feature:278467-278581:1:exon
so has part: feature:279056-279155:1:exon

XP_010408098.3
type: Protein
SIO_000068: ncbiprotein

position:278124:1
position: 278124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279155:1
position: 279155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278124-278196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278467-278581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279056-279155:1:exon

LOC104695808
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279883..285545
location: region:279883-285545:1
so has part: feature:279883-285545:1:exon
subclass of: SO_0000010

104695808
type: Gene
SIO_000068: ncbigene

position:279883:1
position: 279883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285545:1
position: 285545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279883-285545:1:exon

LOC104695808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695808
product: E3 ubiquitin-protein ligase TRIM39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_039562881.1
SIO_010081: LOC104695808
subclass of: SO_0000673
so part of: LOC104695808
location: join(279883..280555,281182..281277,283087..283317,283421..283443,283981..284093,284594..285545)
location: region:279883-285545:1
so has part: feature:279883-280555:1:exon
so has part: feature:281182-281277:1:exon
so has part: feature:283087-283317:1:exon
so has part: feature:283421-283443:1:exon
so has part: feature:283981-284093:1:exon
so has part: feature:284594-285545:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279883-280555:1:exon

position:280555:1
position: 280555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281182-281277:1:exon

position:281182:1
position: 281182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281277:1
position: 281277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283087-283317:1:exon

position:283087:1
position: 283087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283317:1
position: 283317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283421-283443:1:exon

position:283421:1
position: 283421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283443:1
position: 283443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283981-284093:1:exon

position:283981:1
position: 283981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284093:1
position: 284093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284594-285545:1:exon

position:284594:1
position: 284594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39
translation: MALAGALERLQEEAICPICLEYMSEPVSIDCGHNFCRGCIAKHCQDKGLWADGPFSCPQCRASCHRSGFRPNRQLANIVESIRQLGLRGGLGPELEPGTPLCPQHDERLKLFCEEDEEPICVVCRESLQHRPHTVYPIEEAAHVYKVKLQKSLENLSKEVEEVKKRESAERMKTQECKETVKKKRERIVSEFGKLHRLLADEEKLLLQKLEEEEKQILLLINENLARLVEEKCLLEELILEIKEKSQQPADGLLKDMKSILSRCEGVKFQSPQAVSVTLKENYSIPERCLGMRDMLKKFKVDVILDPETAHPDLTVSEDLKSVRRGSKKLLLSLFDNPKRFGTTPVVLGRPGFSSGRHYWEVQVGDKPEWGLGLCREAAGRKGTVLFSPNNGYWVLRLQNGGTYEALTVPVSPLTLSVRPRRVGIFLDYEAGEVSFYSVSDRSHIYTFTDKFSGNLRPLFFLGAFLGGRNAEPLVISWVRDPQGTGCIIL
SIO_010081: LOC104695808
subclass of: SO_0000673
so part of: LOC104695808
location: join(280118..280555,281182..281277,283087..283317,283421..283443,283981..284093,284594..285165)
location: region:280118-285165:1
so has part: feature:280118-280555:1:exon
so has part: feature:281182-281277:1:exon
so has part: feature:283087-283317:1:exon
so has part: feature:283421-283443:1:exon
so has part: feature:283981-284093:1:exon
so has part: feature:284594-285165:1:exon

XP_039418815.1
type: Protein
SIO_000068: ncbiprotein

position:280118:1
position: 280118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285165:1
position: 285165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280118-280555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281182-281277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283087-283317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283421-283443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283981-284093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284594-285165:1:exon

LOC104695785
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(291398..293173)
location: region:291398-293173:-1
so has part: feature:291398-293173:-1:exon
subclass of: SO_0000010

104695785
type: Gene
SIO_000068: ncbigene

position:291398:-1
position: 291398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293173:-1
position: 293173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291398-293173:-1:exon

LOC104695785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695785
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010409795.4
SIO_010081: LOC104695785
subclass of: SO_0000673
so part of: LOC104695785
location: complement(join(291398..291807,292253..292367,292863..293173))
location: region:291398-293173:-1
so has part: feature:292863-293173:-1:exon
so has part: feature:292253-292367:-1:exon
so has part: feature:291398-291807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292863-293173:-1:exon

position:292863:-1
position: 292863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292253-292367:-1:exon

position:292253:-1
position: 292253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292367:-1
position: 292367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291398-291807:-1:exon

position:291807:-1
position: 291807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MKVSVVALAILIAAFCYQTSAAPLGSDPPTSCCFSYISRQLPRSFVTDYYETNSQCSQPAVVFITRKGREVCANPVEDWVQQYVNELELD
SIO_010081: LOC104695785
subclass of: SO_0000673
so part of: LOC104695785
location: complement(join(291720..291807,292253..292367,292863..292932))
location: region:291720-292932:-1
so has part: feature:292863-292932:-1:exon
so has part: feature:292253-292367:-1:exon
so has part: feature:291720-291807:-1:exon

XP_010408097.1
type: Protein
SIO_000068: ncbiprotein

position:291720:-1
position: 291720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292932:-1
position: 292932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292863-292932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292253-292367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291720-291807:-1:exon

LOC104695784
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 301529..303199
location: region:301529-303199:1
so has part: feature:301529-303199:1:exon
subclass of: SO_0000010

104695784
type: Gene
SIO_000068: ncbigene

position:301529:1
position: 301529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303199:1
position: 303199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301529-303199:1:exon

LOC104695784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695784
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010409794.3
SIO_010081: LOC104695784
subclass of: SO_0000673
so part of: LOC104695784
location: join(301529..301836,302294..302405,302716..303199)
location: region:301529-303199:1
so has part: feature:301529-301836:1:exon
so has part: feature:302294-302405:1:exon
so has part: feature:302716-303199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301529-301836:1:exon

position:301836:1
position: 301836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302294-302405:1:exon

position:302294:1
position: 302294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302405:1
position: 302405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302716-303199:1:exon

position:302716:1
position: 302716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MKVSAAGLALLLISASFSQTFSGPAGSDLPICCVKYTQHKLPWKRIQRHYITSSSCPLTAVVFVTKEGRQVCANPENTWVQRHLQILEQN
SIO_010081: LOC104695784
subclass of: SO_0000673
so part of: LOC104695784
location: join(301764..301836,302294..302405,302716..302803)
location: region:301764-302803:1
so has part: feature:301764-301836:1:exon
so has part: feature:302294-302405:1:exon
so has part: feature:302716-302803:1:exon

XP_010408096.1
type: Protein
SIO_000068: ncbiprotein

position:301764:1
position: 301764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302803:1
position: 302803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301764-301836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302294-302405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302716-302803:1:exon

LOC104695783
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(306649..308643)
location: region:306649-308643:-1
so has part: feature:306649-308643:-1:exon
subclass of: SO_0000010

104695783
type: Gene
SIO_000068: ncbigene

position:306649:-1
position: 306649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308643:-1
position: 308643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306649-308643:-1:exon

LOC104695783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695783
product: C-C motif chemokine 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010409793.3
SIO_010081: LOC104695783
subclass of: SO_0000673
so part of: LOC104695783
location: complement(join(306649..307247,307754..307865,308342..308643))
location: region:306649-308643:-1
so has part: feature:308342-308643:-1:exon
so has part: feature:307754-307865:-1:exon
so has part: feature:306649-307247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308342-308643:-1:exon

position:308342:-1
position: 308342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307754-307865:-1:exon

position:307754:-1
position: 307754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307865:-1
position: 307865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306649-307247:-1:exon

position:307247:-1
position: 307247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 5-like
translation: MNTSTLCLSVILVAALFSQAFPAPLGSDTTPCCFSYTSRKLPQSHVQEYFYTSSKCSQPAVVFVTRKKREVCADPDARWVKEYVNSLELQ
SIO_010081: LOC104695783
subclass of: SO_0000673
so part of: LOC104695783
location: complement(join(307160..307247,307754..307865,308342..308414))
location: region:307160-308414:-1
so has part: feature:308342-308414:-1:exon
so has part: feature:307754-307865:-1:exon
so has part: feature:307160-307247:-1:exon

XP_010408095.1
type: Protein
SIO_000068: ncbiprotein

position:307160:-1
position: 307160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308414:-1
position: 308414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308342-308414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307754-307865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307160-307247:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 312375..312446
location: region:312375-312446:1
so has part: feature:312375-312446:1:exon
subclass of: SO_0000663

109146015
type: Gene
SIO_000068: ncbigene

position:312375:1
position: 312375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312446:1
position: 312446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312375-312446:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 932674
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:312408..312410,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 312375..312446
location: region:312375-312446:1
so has part: feature:312375-312446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312375-312446:1:exon

TRNAS-UGA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TRNAS-UGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(314049..314130)
location: region:314049-314130:-1
so has part: feature:314049-314130:-1:exon
subclass of: SO_0000663

109146014
type: Gene
SIO_000068: ncbigene

position:314049:-1
position: 314049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314130:-1
position: 314130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314049-314130:-1:exon

TRNAS-UGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 932674
gene: TRNAS-UGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(314095..314097),aa:Ser,seq:tga)
SIO_010081: TRNAS-UGA
subclass of: SO_0000673
so part of: TRNAS-UGA
location: complement(314049..314130)
location: region:314049-314130:-1
so has part: feature:314049-314130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314049-314130:-1:exon

LOC104695782
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 323313..333451
location: region:323313-333451:1
so has part: feature:323313-333451:1:exon
subclass of: SO_0000010

104695782
type: Gene
SIO_000068: ncbigene

position:323313:1
position: 323313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333451:1
position: 333451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323313-333451:1:exon

LOC104695782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695782
product: myeloperoxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563162.1
SIO_010081: LOC104695782
subclass of: SO_0000673
so part of: LOC104695782
location: join(323313..323464,325454..325583,326465..326665,326757..327072,328471..328631,329043..329295,330576..330746,331552..331789,332275..332492,333423..333451)
location: region:323313-333451:1
so has part: feature:323313-323464:1:exon
so has part: feature:325454-325583:1:exon
so has part: feature:326465-326665:1:exon
so has part: feature:326757-327072:1:exon
so has part: feature:328471-328631:1:exon
so has part: feature:329043-329295:1:exon
so has part: feature:330576-330746:1:exon
so has part: feature:331552-331789:1:exon
so has part: feature:332275-332492:1:exon
so has part: feature:333423-333451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323313-323464:1:exon

position:323464:1
position: 323464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325454-325583:1:exon

position:325454:1
position: 325454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325583:1
position: 325583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326465-326665:1:exon

position:326465:1
position: 326465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326665:1
position: 326665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326757-327072:1:exon

position:326757:1
position: 326757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327072:1
position: 327072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328471-328631:1:exon

position:328471:1
position: 328471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328631:1
position: 328631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329043-329295:1:exon

position:329043:1
position: 329043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329295:1
position: 329295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330576-330746:1:exon

position:330576:1
position: 330576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330746:1
position: 330746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331552-331789:1:exon

position:331552:1
position: 331552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331789:1
position: 331789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:332275-332492:1:exon

position:332275:1
position: 332275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332492:1
position: 332492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:333423-333451:1:exon

position:333423:1
position: 333423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloperoxidase-like
translation: MLLFRVSLADLLSRRQKEMISKGTGCDYQTRSIKCPERDFYRTITGECNNRNHSHLGSSNRAFARWLPALYEDGVSVPRGASEGKHYNGFPLPLVRKVSNEIAHTANENVTADRQLSLVFMHWGQWVNHDIDLAPASGEGASLELQCHTSCAFKPPCFPIKFPPDDPRMLSSDTCMPFVQSASVCNPSTFSREQLNAATSFIDASTVYGSDDSLARSLRNLTNQLGLMALNQDFMDEGLELLPFENTTHSVCVLTNKSANIPCFKAGDKRVTENLGLSAMHTLFVREHNRLAMELRNLNPHWDGEKLYQESRKIVIAINQIITYRDYLPLLLAEETSKWIPSYSGYNEKVDPRASNVFSLAFRFGHTSVQPFVSRLNESFQPLGSFSHVPLHLTFCAPWRIIMEGGIDPLIRGMLVDHAKLMKQNQLLVEELQNHLFEQTEVMGLDLGAMNMQRGRDHGLPGYNAWRGFCGLSQPQTVEELSEVLGNPKLAKKFMNVYGTPYNIDLWIGAVAEPVVPQGRVGPLLSCIIGTQFRNLRDGDRFWWENPGVFTPQQLQALRKISVSRVICDNTHIKKIPRDVFKINTYPEDFTDCQEIDVLDLSPWKDEPESATKGLEEANVFV
SIO_010081: LOC104695782
subclass of: SO_0000673
so part of: LOC104695782
location: join(323313..323464,325454..325583,326465..326665,326757..327072,328471..328631,329043..329295,330576..330746,331552..331789,332275..332492,333423..333451)
location: region:323313-333451:1
so has part: feature:323313-323464:1:exon
so has part: feature:325454-325583:1:exon
so has part: feature:326465-326665:1:exon
so has part: feature:326757-327072:1:exon
so has part: feature:328471-328631:1:exon
so has part: feature:329043-329295:1:exon
so has part: feature:330576-330746:1:exon
so has part: feature:331552-331789:1:exon
so has part: feature:332275-332492:1:exon
so has part: feature:333423-333451:1:exon

XP_039419096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323313-323464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325454-325583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326465-326665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326757-327072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328471-328631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329043-329295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330576-330746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331552-331789:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:332275-332492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333423-333451:1:exon

LOC104695781
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335570..342328)
location: region:335570-342328:-1
so has part: feature:335570-342328:-1:exon
subclass of: SO_0000010

104695781
type: Gene
SIO_000068: ncbigene

position:335570:-1
position: 335570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342328:-1
position: 342328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335570-342328:-1:exon

LOC104695781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695781
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010409791.4
SIO_010081: LOC104695781
subclass of: SO_0000673
so part of: LOC104695781
location: complement(join(335570..336270,338748..338820,339326..339421,339660..339835,340240..340373,342044..342328))
location: region:335570-342328:-1
so has part: feature:342044-342328:-1:exon
so has part: feature:340240-340373:-1:exon
so has part: feature:339660-339835:-1:exon
so has part: feature:339326-339421:-1:exon
so has part: feature:338748-338820:-1:exon
so has part: feature:335570-336270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342044-342328:-1:exon

position:342044:-1
position: 342044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340240-340373:-1:exon

position:340240:-1
position: 340240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340373:-1
position: 340373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339660-339835:-1:exon

position:339660:-1
position: 339660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339835:-1
position: 339835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339326-339421:-1:exon

position:339326:-1
position: 339326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339421:-1
position: 339421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338748-338820:-1:exon

position:338748:-1
position: 338748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338820:-1
position: 338820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335570-336270:-1:exon

position:336270:-1
position: 336270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695781
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha
translation: MEGVSPLLYIASCSDSFTALLNLLRAGRMELFLLHYPFTCLLIAFLVLYQVKPAFRFFCKMTFYKLWLFTISIGVMILSIPRGRNAENMMILRTLALPLKYIFGIQIVVKGKENLRTKKPFVLVLNHQTSLDILVMMEILPRRCVPIAKKEILYMGTFGLACWLSGVIFIDRKRREESIGTLTEVAHSLHKDNLRVLIFPEGTRNHGGSMLPFKRGAFQLAVKAQVPIIPVVLSSYNSFYNRKEKRFTPGKMIIQILPEVETLGLGPDNVPKLTEQVRDSMLSAYQGISGMTNGASH
SIO_010081: LOC104695781
subclass of: SO_0000673
so part of: LOC104695781
location: complement(join(336125..336270,338748..338820,339326..339421,339660..339835,340240..340373,342044..342313))
location: region:336125-342313:-1
so has part: feature:342044-342313:-1:exon
so has part: feature:340240-340373:-1:exon
so has part: feature:339660-339835:-1:exon
so has part: feature:339326-339421:-1:exon
so has part: feature:338748-338820:-1:exon
so has part: feature:336125-336270:-1:exon

XP_010408093.2
type: Protein
SIO_000068: ncbiprotein

position:336125:-1
position: 336125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342313:-1
position: 342313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342044-342313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340240-340373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339660-339835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339326-339421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338748-338820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336125-336270:-1:exon

LOC104695807
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(347083..366374)
location: region:347083-366374:-1
so has part: feature:347083-366374:-1:exon
subclass of: SO_0000010

104695807
type: Gene
SIO_000068: ncbigene

position:347083:-1
position: 347083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366374:-1
position: 366374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347083-366374:-1:exon

LOC104695807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695807
product: eosinophil peroxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563173.1
SIO_010081: LOC104695807
subclass of: SO_0000673
so part of: LOC104695807
location: complement(join(347083..347988,349121..349335,350292..350529,352522..352692,353122..353368,354753..354913,357164..357479,358720..358926,359960..360089,361652..361772,363732..363907,365023..365116,366300..366374))
location: region:347083-366374:-1
so has part: feature:366300-366374:-1:exon
so has part: feature:365023-365116:-1:exon
so has part: feature:363732-363907:-1:exon
so has part: feature:361652-361772:-1:exon
so has part: feature:359960-360089:-1:exon
so has part: feature:358720-358926:-1:exon
so has part: feature:357164-357479:-1:exon
so has part: feature:354753-354913:-1:exon
so has part: feature:353122-353368:-1:exon
so has part: feature:352522-352692:-1:exon
so has part: feature:350292-350529:-1:exon
so has part: feature:349121-349335:-1:exon
so has part: feature:347083-347988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366300-366374:-1:exon

position:366300:-1
position: 366300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365023-365116:-1:exon

position:365023:-1
position: 365023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365116:-1
position: 365116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:363732-363907:-1:exon

position:363732:-1
position: 363732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363907:-1
position: 363907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361652-361772:-1:exon

position:361652:-1
position: 361652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361772:-1
position: 361772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359960-360089:-1:exon

position:359960:-1
position: 359960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360089:-1
position: 360089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:358720-358926:-1:exon

position:358720:-1
position: 358720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358926:-1
position: 358926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357164-357479:-1:exon

position:357164:-1
position: 357164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357479:-1
position: 357479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:354753-354913:-1:exon

position:354753:-1
position: 354753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354913:-1
position: 354913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:353122-353368:-1:exon

position:353122:-1
position: 353122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353368:-1
position: 353368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:352522-352692:-1:exon

position:352522:-1
position: 352522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352692:-1
position: 352692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:350292-350529:-1:exon

position:350292:-1
position: 350292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350529:-1
position: 350529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:349121-349335:-1:exon

position:349121:-1
position: 349121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349335:-1
position: 349335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:347083-347988:-1:exon

position:347988:-1
position: 347988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104695807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eosinophil peroxidase-like
translation: MKAESFLGSLVILSLFQASVSSSYDVPLELPDASLLSSVAEARQRVDAAYRSTRDRIKKNLQNNALTPAELLRYFKQPVEGTRAAVRAADYLQTTLSLLKERLRWAVRGDFNVTDLLTPAQMEMIFKATGCDQQDKKISCAASGYRTITGECNNRRNPSLGASNRALARWLPAEYEDGVSVPRGWTEGRRFSGFPLPLVRQVSNEIVRFPPEQLRMDQQRSLMFMQWGQFIDHDLDFSPETPARFPFSGGTDCDTSCAKEPPCFPIQIPPNDPRITNRRDCLPFFRSAPTCTRGRAIREQINALTSFLDGSVVYGSEVAVAKRLRDQSSQRGLLAVNQNFTDRGRAYMPFGPMRKEPCLKASGAARIPCFFAGDTRASEMLELACMHTLFVREHNRLAGKLKSLNPHWNDERLYQEARKILGAMIQIITYRDYLPLLLGCRFRRFIPRYRGYKESVDPRISNVFTLAFRFAHAAVPPTVGRLDENYRPITPEIQLRTSFFAVWRIIQEGGIDPYLRSLMANQAKLMTQQQMVVSELRDRLFEQVERIGFDLAALNMQRSRDHGLPGYNSWRRFCGLSQPTGVKSLGRVLRNQKLAKKFLQLYGTPKNIDIWIGALAEPFVNGGRVGPLMACLIGTQFRNIRDGDRFWWQNPGVFTPRQRCSLARISLSRIICDNTGITKVSRNIFRANRYPRDFVSCSQIPKLDLRPWKSTSTEEQEKDSGDFKC
SIO_010081: LOC104695807
subclass of: SO_0000673
so part of: LOC104695807
location: complement(join(347960..347988,349121..349335,350292..350529,352522..352692,353122..353368,354753..354913,357164..357479,358720..358926,359960..360089,361652..361772,363732..363907,365023..365116,366300..366372))
location: region:347960-366372:-1
so has part: feature:366300-366372:-1:exon
so has part: feature:365023-365116:-1:exon
so has part: feature:363732-363907:-1:exon
so has part: feature:361652-361772:-1:exon
so has part: feature:359960-360089:-1:exon
so has part: feature:358720-358926:-1:exon
so has part: feature:357164-357479:-1:exon
so has part: feature:354753-354913:-1:exon
so has part: feature:353122-353368:-1:exon
so has part: feature:352522-352692:-1:exon
so has part: feature:350292-350529:-1:exon
so has part: feature:349121-349335:-1:exon
so has part: feature:347960-347988:-1:exon

XP_039419107.1
type: Protein
SIO_000068: ncbiprotein

position:347960:-1
position: 347960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366372:-1
position: 366372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366300-366372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365023-365116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363732-363907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361652-361772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359960-360089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358720-358926:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357164-357479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354753-354913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353122-353368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:352522-352692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350292-350529:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349121-349335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347960-347988:-1:exon

TSPOAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(372881..439327)
location: region:372881-439327:-1
so has part: feature:372881-439327:-1:exon
subclass of: SO_0000010

104695806
type: Gene
SIO_000068: ncbigene

position:372881:-1
position: 372881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439327:-1
position: 439327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372881-439327:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TSPOAP1
product: TSPO associated protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039562717.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(372881..372968,376559..376618,379738..379866,381372..381443,383136..383239,384146..384181,384548..384619,386838..387000,387541..387692,387844..387970,388579..389687,392768..392947,393224..393523,395656..396228,397726..397877,398382..399197,400599..400708,402492..402601,404769..404989,405290..405473,408683..408703,411460..411510,412245..412349,412728..412850,413559..413648,414321..414404,415215..415322,420149..420403,423597..423773,425141..425269,426881..426988,439065..439327))
location: region:372881-439327:-1
so has part: feature:439065-439327:-1:exon
so has part: feature:426881-426988:-1:exon
so has part: feature:425141-425269:-1:exon
so has part: feature:423597-423773:-1:exon
so has part: feature:420149-420403:-1:exon
so has part: feature:415215-415322:-1:exon
so has part: feature:414321-414404:-1:exon
so has part: feature:413559-413648:-1:exon
so has part: feature:412728-412850:-1:exon
so has part: feature:412245-412349:-1:exon
so has part: feature:411460-411510:-1:exon
so has part: feature:408683-408703:-1:exon
so has part: feature:405290-405473:-1:exon
so has part: feature:404769-404989:-1:exon
so has part: feature:402492-402601:-1:exon
so has part: feature:400599-400708:-1:exon
so has part: feature:398382-399197:-1:exon
so has part: feature:397726-397877:-1:exon
so has part: feature:395656-396228:-1:exon
so has part: feature:393224-393523:-1:exon
so has part: feature:392768-392947:-1:exon
so has part: feature:388579-389687:-1:exon
so has part: feature:387844-387970:-1:exon
so has part: feature:387541-387692:-1:exon
so has part: feature:386838-387000:-1:exon
so has part: feature:384548-384619:-1:exon
so has part: feature:384146-384181:-1:exon
so has part: feature:383136-383239:-1:exon
so has part: feature:381372-381443:-1:exon
so has part: feature:379738-379866:-1:exon
so has part: feature:376559-376618:-1:exon
so has part: feature:372881-372968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439065-439327:-1:exon

position:439065:-1
position: 439065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426881-426988:-1:exon

position:426881:-1
position: 426881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426988:-1
position: 426988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425141-425269:-1:exon

position:425141:-1
position: 425141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425269:-1
position: 425269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:423597-423773:-1:exon

position:423597:-1
position: 423597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423773:-1
position: 423773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420149-420403:-1:exon

position:420149:-1
position: 420149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420403:-1
position: 420403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415215-415322:-1:exon

position:415215:-1
position: 415215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415322:-1
position: 415322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414321-414404:-1:exon

position:414321:-1
position: 414321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414404:-1
position: 414404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:413559-413648:-1:exon

position:413559:-1
position: 413559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413648:-1
position: 413648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:412728-412850:-1:exon

position:412728:-1
position: 412728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412850:-1
position: 412850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:412245-412349:-1:exon

position:412245:-1
position: 412245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412349:-1
position: 412349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:411460-411510:-1:exon

position:411460:-1
position: 411460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411510:-1
position: 411510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:408683-408703:-1:exon

position:408683:-1
position: 408683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408703:-1
position: 408703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:405290-405473:-1:exon

position:405290:-1
position: 405290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405473:-1
position: 405473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:404769-404989:-1:exon

position:404769:-1
position: 404769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404989:-1
position: 404989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:402492-402601:-1:exon

position:402492:-1
position: 402492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402601:-1
position: 402601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:400599-400708:-1:exon

position:400599:-1
position: 400599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400708:-1
position: 400708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:398382-399197:-1:exon

position:398382:-1
position: 398382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399197:-1
position: 399197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:397726-397877:-1:exon

position:397726:-1
position: 397726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397877:-1
position: 397877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:395656-396228:-1:exon

position:395656:-1
position: 395656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396228:-1
position: 396228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:393224-393523:-1:exon

position:393224:-1
position: 393224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393523:-1
position: 393523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:392768-392947:-1:exon

position:392768:-1
position: 392768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392947:-1
position: 392947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:388579-389687:-1:exon

position:388579:-1
position: 388579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389687:-1
position: 389687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:387844-387970:-1:exon

position:387844:-1
position: 387844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387970:-1
position: 387970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:387541-387692:-1:exon

position:387541:-1
position: 387541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387692:-1
position: 387692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:386838-387000:-1:exon

position:386838:-1
position: 386838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387000:-1
position: 387000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:384548-384619:-1:exon

position:384548:-1
position: 384548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384619:-1
position: 384619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:384146-384181:-1:exon

position:384146:-1
position: 384146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384181:-1
position: 384181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:383136-383239:-1:exon

position:383136:-1
position: 383136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383239:-1
position: 383239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:381372-381443:-1:exon

position:381372:-1
position: 381372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381443:-1
position: 381443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:379738-379866:-1:exon

position:379738:-1
position: 379738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379866:-1
position: 379866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:376559-376618:-1:exon

position:376559:-1
position: 376559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376618:-1
position: 376618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:372881-372968:-1:exon

position:372968:-1
position: 372968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TSPOAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peripheral-type benzodiazepine receptor-associated protein 1
translation: MDRTDRHPQSGADYGFLVSQNTKLLSALEDLRHRCSSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFARQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNVIEFDRLLRESQREVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAAHLGPTNSCLKGAPRPRGALGDPTLGGRAHREVEPGVQPLGPASEGHENSPPKNAVTNQESSKQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQSENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLVLQEKQEEVRRLQQAQAEARREHEGAVQLLESTLDCMQARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPRWDKESAVPGLLPHQSTKKIHNEGSDELQLSQRGPDTTTGSPAAPTSTQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGPAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELSDLTHSSYQEKSLVSASTSSGEKSEFSIEESSVSPLASRAEGDREEPVSHTAVPYPRKLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVIEKLDLHSRAYRVSVQTVTEHGSSDKLRCTFFVGQAFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFRNLQPSTQYVAKLEARPMKTPWEEVPQGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPGILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCREVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPSRLARGGPRASLPARSPQHTPALPLQQKIPAESSDAKRIDPSSSPVGSAWPLPEKASSPPHLPSPSASLVQAPGTSPQGSDTGGDKKCLSVPPQQAGTVLPGQGTEPGPSQEPGLQQPGEGTEVQLEQSATKAPELGSPTDSRGKLQTETCHMCSVEEAPKGPSADREREAEKHLSPEPPSSPSQAEGTQDPFQDGNTSGTSCQEFLRLSPGKEVMKEMSRVKREQEEKLSEMGRRQLTLFSEHNRSSDLSDILEEEEEEELSSEALEEKKWDQREPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDVTEEKTDPQDSLETQTYHSGRTEKPPNSKEPFLKEDGNNTSMDVSAQTPQEEHGAKESRADADRANPAFGQLAWSQKKAHWNWGYQENDPKSGSGTSPSWSKKKGNNYREKTRSRPEISRKRQSDPAEHCSRLLGNCSQMGSGLYRAPSLREELNVVSSAGGKEGLDLYSRARQGTLRKKAPRAGGAEPAVMAMHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHPGGRRELTRLEMMEEQGMEWAGSPXQHLRFFCREKEALRCESSSEEQGWELDCKSPGWRRRLEHSSKGIRSTSLHKRASSHKDSRGPEPPCTAAWQAPSRRRSKSVRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADTESPGNGTFSPPPRRQTVPPPKPRRSKKAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDIITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDTAEEFHSKDKEASPLSAESQRMRKRRVQ
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(376592..376618,379738..379866,381372..381443,383136..383239,384146..384181,384548..384619,386838..387000,387541..387692,387844..387970,388579..389687,392768..392947,393224..393523,395656..396228,397726..397877,398382..399197,400599..400708,402492..402601,404769..404989,405290..405473,408683..408703,411460..411510,412245..412349,412728..412850,413559..413648,414321..414404,415215..415322,420149..420403,423597..423773,425141..425269,426881..426988,439065..439091))
location: region:376592-439091:-1
so has part: feature:439065-439091:-1:exon
so has part: feature:426881-426988:-1:exon
so has part: feature:425141-425269:-1:exon
so has part: feature:423597-423773:-1:exon
so has part: feature:420149-420403:-1:exon
so has part: feature:415215-415322:-1:exon
so has part: feature:414321-414404:-1:exon
so has part: feature:413559-413648:-1:exon
so has part: feature:412728-412850:-1:exon
so has part: feature:412245-412349:-1:exon
so has part: feature:411460-411510:-1:exon
so has part: feature:408683-408703:-1:exon
so has part: feature:405290-405473:-1:exon
so has part: feature:404769-404989:-1:exon
so has part: feature:402492-402601:-1:exon
so has part: feature:400599-400708:-1:exon
so has part: feature:398382-399197:-1:exon
so has part: feature:397726-397877:-1:exon
so has part: feature:395656-396228:-1:exon
so has part: feature:393224-393523:-1:exon
so has part: feature:392768-392947:-1:exon
so has part: feature:388579-389687:-1:exon
so has part: feature:387844-387970:-1:exon
so has part: feature:387541-387692:-1:exon
so has part: feature:386838-387000:-1:exon
so has part: feature:384548-384619:-1:exon
so has part: feature:384146-384181:-1:exon
so has part: feature:383136-383239:-1:exon
so has part: feature:381372-381443:-1:exon
so has part: feature:379738-379866:-1:exon
so has part: feature:376592-376618:-1:exon

XP_039418651.1
type: Protein
SIO_000068: ncbiprotein

position:376592:-1
position: 376592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439091:-1
position: 439091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439065-439091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426881-426988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425141-425269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423597-423773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420149-420403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415215-415322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414321-414404:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413559-413648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:412728-412850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:412245-412349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:411460-411510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:408683-408703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405290-405473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:404769-404989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402492-402601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400599-400708:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:398382-399197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:397726-397877:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395656-396228:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393224-393523:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392768-392947:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388579-389687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:387844-387970:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:387541-387692:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:386838-387000:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:384548-384619:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:384146-384181:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:383136-383239:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:381372-381443:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:379738-379866:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376592-376618:-1:exon

LOC120411037
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(444961..446859)
location: region:444961-446859:-1
so has part: feature:444961-446859:-1:exon
subclass of: SO_0000011

120411037
type: Gene
SIO_000068: ncbigene

position:444961:-1
position: 444961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446859:-1
position: 446859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444961-446859:-1:exon

LOC120411037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411037
product: uncharacterized LOC120411037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_005603424.1
SIO_010081: LOC120411037
subclass of: SO_0000673
so part of: LOC120411037
location: complement(join(444961..445660,446743..446859))
location: region:444961-446859:-1
so has part: feature:446743-446859:-1:exon
so has part: feature:444961-445660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446743-446859:-1:exon

position:446743:-1
position: 446743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444961-445660:-1:exon

position:445660:-1
position: 445660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT4H1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(456586..459281)
location: region:456586-459281:-1
so has part: feature:456586-459281:-1:exon
subclass of: SO_0000010

104695805
type: Gene
SIO_000068: ncbigene

position:456586:-1
position: 456586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459281:-1
position: 459281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456586-459281:-1:exon

SUPT4H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SUPT4H1
product: SPT4 homolog, DSIF elongation factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_039562973.1
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(456586..456982,457990..458043,458219..458274,458386..458492,459064..459281))
location: region:456586-459281:-1
so has part: feature:459064-459281:-1:exon
so has part: feature:458386-458492:-1:exon
so has part: feature:458219-458274:-1:exon
so has part: feature:457990-458043:-1:exon
so has part: feature:456586-456982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459064-459281:-1:exon

position:459064:-1
position: 459064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458386-458492:-1:exon

position:458386:-1
position: 458386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458492:-1
position: 458492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458219-458274:-1:exon

position:458219:-1
position: 458219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458274:-1
position: 458274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457990-458043:-1:exon

position:457990:-1
position: 457990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458043:-1
position: 458043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456586-456982:-1:exon

position:456982:-1
position: 456982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT4H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT4
translation: MAAISLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCETYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRISTFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(456915..456982,457990..458043,458219..458274,458386..458492,459064..459141))
location: region:456915-459141:-1
so has part: feature:459064-459141:-1:exon
so has part: feature:458386-458492:-1:exon
so has part: feature:458219-458274:-1:exon
so has part: feature:457990-458043:-1:exon
so has part: feature:456915-456982:-1:exon

XP_039418907.1
type: Protein
SIO_000068: ncbiprotein

position:456915:-1
position: 456915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459141:-1
position: 459141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459064-459141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458386-458492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458219-458274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457990-458043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456915-456982:-1:exon

RNF43
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459562..520486)
location: region:459562-520486:-1
so has part: feature:459562-520486:-1:exon
subclass of: SO_0000010

104695803
type: Gene
SIO_000068: ncbigene

position:459562:-1
position: 459562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520486:-1
position: 520486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459562-520486:-1:exon

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RNF43
product: ring finger protein 43
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039562972.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(459562..462560,468731..470253,470709..470811,471316..471471,472153..472254,472755..472886,474274..474348,478649..478771,518561..519858,519965..520486))
location: region:459562-520486:-1
so has part: feature:519965-520486:-1:exon
so has part: feature:518561-519858:-1:exon
so has part: feature:478649-478771:-1:exon
so has part: feature:474274-474348:-1:exon
so has part: feature:472755-472886:-1:exon
so has part: feature:472153-472254:-1:exon
so has part: feature:471316-471471:-1:exon
so has part: feature:470709-470811:-1:exon
so has part: feature:468731-470253:-1:exon
so has part: feature:459562-462560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519965-520486:-1:exon

position:519965:-1
position: 519965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518561-519858:-1:exon

position:518561:-1
position: 518561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519858:-1
position: 519858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478649-478771:-1:exon

position:478649:-1
position: 478649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478771:-1
position: 478771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474274-474348:-1:exon

position:474274:-1
position: 474274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474348:-1
position: 474348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472755-472886:-1:exon

position:472755:-1
position: 472755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472886:-1
position: 472886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472153-472254:-1:exon

position:472153:-1
position: 472153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472254:-1
position: 472254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471316-471471:-1:exon

position:471316:-1
position: 471316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471471:-1
position: 471471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470709-470811:-1:exon

position:470709:-1
position: 470709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470811:-1
position: 470811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:468731-470253:-1:exon

position:468731:-1
position: 468731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470253:-1
position: 470253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:459562-462560:-1:exon

position:462560:-1
position: 462560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RNF43
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
translation: MSAGPQVQLALLWPWLLMATLQAGLGQTGLALAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATRRYQPRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSGEQATAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFLPEPAPGNPFFHSPELSQLDFGTIHYMPYRPTTSLLACGHVAPLAPGLLGQQHPNPSACGQALAPHRTCPLQPQPPCLAPKAALAQKQHRASALRRGLGHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPATDHGQEQLRPPRERRPRSLDLMVPRSAAPAKPQVLSHVHYHHHQHHHYRRDSECPPGRAGQGPGPRKSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSAVLQEAAPAGQPACPQEGWKAPHSPSTSPSRLDFSVDANRQSGAAGTPPVPLPPRYSLQSRHHRRKRKCPLEPDPALLPKDSAEPRACDTHLPPGHPAGYRCSPEAQPXIPSAALPSGSRPLWKCLVPQSSSEPRKQEEGLSGREGNRSVPADFSGTGTPRHSLSVRLHCPSQQGGPASEEEVQDVHEHSV
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(462517..462560,468731..470253,470709..470811,471316..471471,472153..472254,472755..472886,474274..474348,478649..478771,518561..518797))
location: region:462517-518797:-1
so has part: feature:518561-518797:-1:exon
so has part: feature:478649-478771:-1:exon
so has part: feature:474274-474348:-1:exon
so has part: feature:472755-472886:-1:exon
so has part: feature:472153-472254:-1:exon
so has part: feature:471316-471471:-1:exon
so has part: feature:470709-470811:-1:exon
so has part: feature:468731-470253:-1:exon
so has part: feature:462517-462560:-1:exon

XP_039418906.1
type: Protein
SIO_000068: ncbiprotein

position:462517:-1
position: 462517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518797:-1
position: 518797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518561-518797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478649-478771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474274-474348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472755-472886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472153-472254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471316-471471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470709-470811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468731-470253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462517-462560:-1:exon

MTMR4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553950..597296)
location: region:553950-597296:-1
so has part: feature:553950-597296:-1:exon
subclass of: SO_0000010

104695802
type: Gene
SIO_000068: ncbigene

position:553950:-1
position: 553950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597296:-1
position: 597296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553950-597296:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MTMR4
product: myotubularin related protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039563085.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(553950..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,568350..568751))
location: region:553950-568751:-1
so has part: feature:568350-568751:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:553950-554580:-1:exon

position:568751:-1
position: 568751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568350-568751:-1:exon

position:568350:-1
position: 568350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565953-566042:-1:exon

position:565953:-1
position: 565953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566042:-1
position: 566042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563043-563159:-1:exon

position:563043:-1
position: 563043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563159:-1
position: 563159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562311-562393:-1:exon

position:562311:-1
position: 562311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562393:-1
position: 562393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:561972-562138:-1:exon

position:561972:-1
position: 561972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562138:-1
position: 562138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:560091-560187:-1:exon

position:560091:-1
position: 560091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560187:-1
position: 560187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553950-554580:-1:exon

position:554580:-1
position: 554580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MTMR4
product: myotubularin related protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039563086.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(553952..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,576304..576377,597222..597296))
location: region:553952-597296:-1
so has part: feature:597222-597296:-1:exon
so has part: feature:576304-576377:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:553952-554580:-1:exon

position:553952:-1
position: 553952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597222-597296:-1:exon

position:597222:-1
position: 597222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576304-576377:-1:exon

position:576304:-1
position: 576304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576377:-1
position: 576377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565953-566042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563043-563159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562311-562393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561972-562138:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560091-560187:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553952-554580:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MTMR4
product: myotubularin related protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039563087.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(553952..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,576304..576377,596645..596809))
location: region:553952-596809:-1
so has part: feature:596645-596809:-1:exon
so has part: feature:576304-576377:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:553952-554580:-1:exon

position:596809:-1
position: 596809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596645-596809:-1:exon

position:596645:-1
position: 596645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576304-576377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565953-566042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563043-563159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562311-562393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561972-562138:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560091-560187:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553952-554580:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYR
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(554463..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,576304..576306))
location: region:554463-576306:-1
so has part: feature:576304-576306:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:554463-554580:-1:exon

XP_039419020.1
type: Protein
SIO_000068: ncbiprotein

position:554463:-1
position: 554463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576306:-1
position: 576306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576304-576306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565953-566042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563043-563159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562311-562393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561972-562138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560091-560187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554463-554580:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYR
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(554463..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,576304..576306))
location: region:554463-576306:-1
so has part: feature:576304-576306:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:554463-554580:-1:exon

XP_039419021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576304-576306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565953-566042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563043-563159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562311-562393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561972-562138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560091-560187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554463-554580:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X1
translation: MPLPGEEGAVAAAPRSRRPLHFLSRPSRRRSDGRAALGGPGREVESARPPPALPPLSAAAAAAPARAAGGRDAPALPGGAGTLPQCRGRGRSSQPEGGNAACACPALLPPREMNMSLPGRVSCSMLNCFGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYR
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(554463..554580,560091..560187,561972..562138,562311..562393,563043..563159,565953..566042,568350..568736))
location: region:554463-568736:-1
so has part: feature:568350-568736:-1:exon
so has part: feature:565953-566042:-1:exon
so has part: feature:563043-563159:-1:exon
so has part: feature:562311-562393:-1:exon
so has part: feature:561972-562138:-1:exon
so has part: feature:560091-560187:-1:exon
so has part: feature:554463-554580:-1:exon

XP_039419019.1
type: Protein
SIO_000068: ncbiprotein

position:568736:-1
position: 568736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568350-568736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565953-566042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563043-563159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562311-562393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561972-562138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560091-560187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554463-554580:-1:exon

LOC109146007
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597652..600767
location: region:597652-600767:1
so has part: feature:597652-600767:1:exon
subclass of: SO_0000011

109146007
type: Gene
SIO_000068: ncbigene

position:597652:1
position: 597652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600767:1
position: 600767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597652-600767:1:exon

LOC109146007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146007
product: uncharacterized LOC109146007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002047760.3
SIO_010081: LOC109146007
subclass of: SO_0000673
so part of: LOC109146007
location: join(597652..598923,599190..599287,600419..600767)
location: region:597652-600767:1
so has part: feature:597652-598923:1:exon
so has part: feature:599190-599287:1:exon
so has part: feature:600419-600767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597652-598923:1:exon

position:598923:1
position: 598923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599190-599287:1:exon

position:599190:1
position: 599190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599287:1
position: 599287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600419-600767:1:exon

position:600419:1
position: 600419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABHD11
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601899..604151)
location: region:601899-604151:-1
so has part: feature:601899-604151:-1:exon
subclass of: SO_0000010

104695801
type: Gene
SIO_000068: ncbigene

position:601899:-1
position: 601899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604151:-1
position: 604151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601899-604151:-1:exon

ABHD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ABHD11
product: abhydrolase domain containing 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039563118.1
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(601899..602401,602683..602864,602970..603140,603567..603740,603839..604151))
location: region:601899-604151:-1
so has part: feature:603839-604151:-1:exon
so has part: feature:603567-603740:-1:exon
so has part: feature:602970-603140:-1:exon
so has part: feature:602683-602864:-1:exon
so has part: feature:601899-602401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603839-604151:-1:exon

position:603839:-1
position: 603839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603567-603740:-1:exon

position:603567:-1
position: 603567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603740:-1
position: 603740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602970-603140:-1:exon

position:602970:-1
position: 602970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603140:-1
position: 603140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602683-602864:-1:exon

position:602683:-1
position: 602683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602864:-1
position: 602864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601899-602401:-1:exon

position:602401:-1
position: 602401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ABHD11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein ABHD11
translation: MCLTRAGQRGRAHFPXHPSGHTPCPSPCSAVPLAHVEVEGRRDRPPLVLLHGLFGSHGNFQTVAKTLVRRGSGKVLTVDARNHGSSPHSPVMTYEAMSLDVQHLLSRLGINKCILVGHSMGGKTAMTLALQRPDLVERLISVDISPGSTAPVSEFSAYISAMKEVKVPVGLSRSAARQLADDQLQPVVKIPQLRQFLLTNLVEVEGRYVWRVNLEAISRHLADIMNFPVFHKPYPGPALFLGGSDSPYISSRDYPEIQRLFPKAEIQYIKGAGHIVHQDKFEEFITAVLNFLPQL
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(602263..602401,602683..602864,602970..603140,603567..603740,603839..604061))
location: region:602263-604061:-1
so has part: feature:603839-604061:-1:exon
so has part: feature:603567-603740:-1:exon
so has part: feature:602970-603140:-1:exon
so has part: feature:602683-602864:-1:exon
so has part: feature:602263-602401:-1:exon

XP_039419052.1
type: Protein
SIO_000068: ncbiprotein

position:602263:-1
position: 602263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604061:-1
position: 604061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603839-604061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603567-603740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602970-603140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602683-602864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602263-602401:-1:exon

CLDN3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CLDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(606002..607123)
location: region:606002-607123:-1
so has part: feature:606002-607123:-1:exon
subclass of: SO_0000010

120411029
type: Gene
SIO_000068: ncbigene

position:606002:-1
position: 606002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607123:-1
position: 607123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606002-607123:-1:exon

CLDN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CLDN3
product: claudin 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563119.1
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(606002..607123)
location: region:606002-607123:-1
so has part: feature:606002-607123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606002-607123:-1:exon

CLDN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CLDN3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: claudin-3
translation: MSMGLEIGGVALSVLGWLCSIICCALPMWRVSAFIGNNIVTAQIIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQAARALLVVAIILAVIGLMVAIMGAQCTRCVEDESTKAKITIVSGVIFLLSGVMTLIPVCWSANTIIRDFYNPLVIEAQKRELGTSLYVGWAASALLMLGGALLCCSCPPKDDRYXTGKVAYSAPRSAVTSYDKRNYV
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(606091..606734)
location: region:606091-606734:-1
so has part: feature:606091-606734:-1:exon

XP_039419053.1
type: Protein
SIO_000068: ncbiprotein

position:606091:-1
position: 606091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606734:-1
position: 606734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606091-606734:-1:exon

LOC104695780
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 612291..620088
location: region:612291-620088:1
so has part: feature:612291-620088:1:exon
subclass of: SO_0000010

104695780
type: Gene
SIO_000068: ncbigene

position:612291:1
position: 612291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620088:1
position: 620088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612291-620088:1:exon

LOC104695780
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695780
product: claudin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039562977.1
SIO_010081: LOC104695780
subclass of: SO_0000673
so part of: LOC104695780
location: join(612291..612396,619256..620088)
location: region:612291-620088:1
so has part: feature:612291-612396:1:exon
so has part: feature:619256-620088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612291-612396:1:exon

position:612396:1
position: 612396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619256-620088:1:exon

position:619256:1
position: 619256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120411019
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 615108..617325
location: region:615108-617325:1
so has part: feature:615108-617325:1:exon
subclass of: SO_0000010

120411019
type: Gene
SIO_000068: ncbigene

position:615108:1
position: 615108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617325:1
position: 617325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615108-617325:1:exon

LOC120411019
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120411019
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039562976.1
SIO_010081: LOC120411019
subclass of: SO_0000673
so part of: LOC120411019
location: 615108..617325
location: region:615108-617325:1
so has part: feature:615108-617325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615108-617325:1:exon

LOC120411019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120411019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MASMGMQVLGIALSVIGWLASILCCALPMWRETAFVGNNIVVAQIIWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARAMVVVAIVLAILGTLLAVAGGKCTNCVEDDTAKAKVMILSGIIFIVAGILILIPISWSANSIVQDFYNPLVSDSQKRDLGSSLYVGWAASALLLLGGGILCCTCPPRGEKPYSAKFTAARSLPASTTCRSRRACLDAPAAPGSGGPPGTLNLPGWDWPGAGAVRGRADRAAFVSPGFKPVL
SIO_010081: LOC120411019
subclass of: SO_0000673
so part of: LOC120411019
location: 615854..616642
location: region:615854-616642:1
so has part: feature:615854-616642:1:exon

XP_039418910.1
type: Protein
SIO_000068: ncbiprotein

position:615854:1
position: 615854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616642:1
position: 616642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615854-616642:1:exon

LOC104695780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-3-like
translation: MAMMTMQMGGLMMAALGWLGSILTCALPMWKVTAFIGSNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLELTSDLQAARALVVTSIFVAFLAFLMALSGADCTRCVDDNGTKTRISAVSGVIFIMASIMLLIPVSWSANSIVSNFYNPMVPEALKRELGAALYIGWASSALQLFGGGVLCCSGSQSQQDHYPKKYRAVKTCGPMGYAMKDYV
SIO_010081: LOC104695780
subclass of: SO_0000673
so part of: LOC104695780
location: 619265..619909
location: region:619265-619909:1
so has part: feature:619265-619909:1:exon

XP_039418911.1
type: Protein
SIO_000068: ncbiprotein

position:619265:1
position: 619265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619909:1
position: 619909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619265-619909:1:exon

METTL27
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(620419..623138)
location: region:620419-623138:-1
so has part: feature:620419-623138:-1:exon
subclass of: SO_0000010

109146013
type: Gene
SIO_000068: ncbigene

position:620419:-1
position: 620419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623138:-1
position: 623138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620419-623138:-1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: METTL27
product: methyltransferase like 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039562975.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(620419..621294,621518..621781,622258..622350,622475..622610,622686..622814,622887..623138))
location: region:620419-623138:-1
so has part: feature:622887-623138:-1:exon
so has part: feature:622686-622814:-1:exon
so has part: feature:622475-622610:-1:exon
so has part: feature:622258-622350:-1:exon
so has part: feature:621518-621781:-1:exon
so has part: feature:620419-621294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622887-623138:-1:exon

position:622887:-1
position: 622887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622686-622814:-1:exon

position:622686:-1
position: 622686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622814:-1
position: 622814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622475-622610:-1:exon

position:622475:-1
position: 622475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622610:-1
position: 622610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622258-622350:-1:exon

position:622258:-1
position: 622258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622350:-1
position: 622350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621518-621781:-1:exon

position:621518:-1
position: 621518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621781:-1
position: 621781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620419-621294:-1:exon

position:621294:-1
position: 621294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: METTL27
product: methyltransferase like 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039562974.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(620419..621781,622258..622350,622475..622610,622686..622814,622887..623138))
location: region:620419-623138:-1
so has part: feature:622887-623138:-1:exon
so has part: feature:622686-622814:-1:exon
so has part: feature:622475-622610:-1:exon
so has part: feature:622258-622350:-1:exon
so has part: feature:620419-621781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622887-623138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622686-622814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622475-622610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622258-622350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620419-621781:-1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27
translation: MGCGGGANEALGRVPSGGGANGLRGACPERSPAGGRGGPAGTGMGLPAALRDQVAAVHRGSALPERLRLYDGWAARYEQDVAALEYRAPHLAAASLSFAFPAPRAEARLLDVGCGTGLVARELHRRGFRCLHGVDGSAGMLEQARSTGLYQELRLCVLGTEPLPAPAEHYDAVTVVGALGEGQVSSTVLPELLRVTKPGGFLCLTTRSNPSNLRYKAELEAAMGQLERSGAWQKLLAQEVEYWERATTEEESTQGTGYISGVVYIYQKCPVPHLEEG
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(621543..621781,622258..622350,622475..622610,622686..622814,622887..623123))
location: region:621543-623123:-1
so has part: feature:622887-623123:-1:exon
so has part: feature:622686-622814:-1:exon
so has part: feature:622475-622610:-1:exon
so has part: feature:622258-622350:-1:exon
so has part: feature:621543-621781:-1:exon

XP_039418908.1
type: Protein
SIO_000068: ncbiprotein

position:621543:-1
position: 621543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623123:-1
position: 623123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622887-623123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622686-622814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622475-622610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622258-622350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621543-621781:-1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27
translation: MGCGGGANEALGRVPSGGGANGLRGACPERSPAGGRGGPAGTGMGLPAALRDQVAAVHRGSALPERLRLYDGWAARYEQDVAALEYRAPHLAAASLSFAFPAPRAEARLLDVGCGTGLVARELHRRGFRCLHGVDGSAGMLEQARSTGLYQELRLCVLGTEPLPAPAEHYDAVTVVGALGEGQVSSTVLPELLRVTKPGGFLCLTTRSNPSNLRYKAELEAAMGQLERSGAWQKLLAQEVEYWERATTEEESTQGTGYISGVVYIYQKCPVPHLEEG
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(621543..621781,622258..622350,622475..622610,622686..622814,622887..623123))
location: region:621543-623123:-1
so has part: feature:622887-623123:-1:exon
so has part: feature:622686-622814:-1:exon
so has part: feature:622475-622610:-1:exon
so has part: feature:622258-622350:-1:exon
so has part: feature:621543-621781:-1:exon

XP_039418909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622887-623123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622686-622814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622475-622610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622258-622350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621543-621781:-1:exon

ELN
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 716101..741912
location: region:716101-741912:1
so has part: feature:716101-741912:1:exon
subclass of: SO_0000010

104695800
type: Gene
SIO_000068: ncbigene

position:716101:1
position: 716101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741912:1
position: 741912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716101-741912:1:exon

ELN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ELN
product: elastin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039563045.1
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(716101..716217,722285..722338,722795..722821,723005..723037,724449..724493,725033..725125,725480..725536,725640..725705,725788..725835,726821..726892,727118..727144,727352..727423,730052..730078,730494..730558,730831..730875,731039..731119,731209..731268,731953..732057,732141..732183,732758..732895,732979..733020,734300..734438,734522..734563,736516..736779,737017..737142,737224..737280,737417..737554,737639..737686,738410..738511,738713..738766,738936..739058,739243..739290,739666..739707,739924..739962,740409..740435,740848..740889,741049..741075,741169..741219,741337..741912)
location: region:716101-741912:1
so has part: feature:716101-716217:1:exon
so has part: feature:722285-722338:1:exon
so has part: feature:722795-722821:1:exon
so has part: feature:723005-723037:1:exon
so has part: feature:724449-724493:1:exon
so has part: feature:725033-725125:1:exon
so has part: feature:725480-725536:1:exon
so has part: feature:725640-725705:1:exon
so has part: feature:725788-725835:1:exon
so has part: feature:726821-726892:1:exon
so has part: feature:727118-727144:1:exon
so has part: feature:727352-727423:1:exon
so has part: feature:730052-730078:1:exon
so has part: feature:730494-730558:1:exon
so has part: feature:730831-730875:1:exon
so has part: feature:731039-731119:1:exon
so has part: feature:731209-731268:1:exon
so has part: feature:731953-732057:1:exon
so has part: feature:732141-732183:1:exon
so has part: feature:732758-732895:1:exon
so has part: feature:732979-733020:1:exon
so has part: feature:734300-734438:1:exon
so has part: feature:734522-734563:1:exon
so has part: feature:736516-736779:1:exon
so has part: feature:737017-737142:1:exon
so has part: feature:737224-737280:1:exon
so has part: feature:737417-737554:1:exon
so has part: feature:737639-737686:1:exon
so has part: feature:738410-738511:1:exon
so has part: feature:738713-738766:1:exon
so has part: feature:738936-739058:1:exon
so has part: feature:739243-739290:1:exon
so has part: feature:739666-739707:1:exon
so has part: feature:739924-739962:1:exon
so has part: feature:740409-740435:1:exon
so has part: feature:740848-740889:1:exon
so has part: feature:741049-741075:1:exon
so has part: feature:741169-741219:1:exon
so has part: feature:741337-741912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716101-716217:1:exon

position:716217:1
position: 716217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722285-722338:1:exon

position:722285:1
position: 722285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722338:1
position: 722338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722795-722821:1:exon

position:722795:1
position: 722795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722821:1
position: 722821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723005-723037:1:exon

position:723005:1
position: 723005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723037:1
position: 723037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:724449-724493:1:exon

position:724449:1
position: 724449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724493:1
position: 724493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:725033-725125:1:exon

position:725033:1
position: 725033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725125:1
position: 725125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:725480-725536:1:exon

position:725480:1
position: 725480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725536:1
position: 725536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725640-725705:1:exon

position:725640:1
position: 725640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725705:1
position: 725705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:725788-725835:1:exon

position:725788:1
position: 725788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725835:1
position: 725835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:726821-726892:1:exon

position:726821:1
position: 726821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726892:1
position: 726892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:727118-727144:1:exon

position:727118:1
position: 727118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727144:1
position: 727144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:727352-727423:1:exon

position:727352:1
position: 727352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727423:1
position: 727423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:730052-730078:1:exon

position:730052:1
position: 730052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730078:1
position: 730078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:730494-730558:1:exon

position:730494:1
position: 730494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730558:1
position: 730558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:730831-730875:1:exon

position:730831:1
position: 730831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730875:1
position: 730875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:731039-731119:1:exon

position:731039:1
position: 731039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731119:1
position: 731119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:731209-731268:1:exon

position:731209:1
position: 731209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731268:1
position: 731268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:731953-732057:1:exon

position:731953:1
position: 731953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732057:1
position: 732057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:732141-732183:1:exon

position:732141:1
position: 732141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732183:1
position: 732183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:732758-732895:1:exon

position:732758:1
position: 732758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732895:1
position: 732895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:732979-733020:1:exon

position:732979:1
position: 732979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733020:1
position: 733020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:734300-734438:1:exon

position:734300:1
position: 734300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734438:1
position: 734438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:734522-734563:1:exon

position:734522:1
position: 734522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734563:1
position: 734563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:736516-736779:1:exon

position:736516:1
position: 736516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736779:1
position: 736779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:737017-737142:1:exon

position:737017:1
position: 737017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737142:1
position: 737142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:737224-737280:1:exon

position:737224:1
position: 737224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737280:1
position: 737280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:737417-737554:1:exon

position:737417:1
position: 737417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737554:1
position: 737554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:737639-737686:1:exon

position:737639:1
position: 737639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737686:1
position: 737686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:738410-738511:1:exon

position:738410:1
position: 738410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738511:1
position: 738511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:738713-738766:1:exon

position:738713:1
position: 738713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738766:1
position: 738766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:738936-739058:1:exon

position:738936:1
position: 738936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739058:1
position: 739058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:739243-739290:1:exon

position:739243:1
position: 739243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739290:1
position: 739290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:739666-739707:1:exon

position:739666:1
position: 739666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739707:1
position: 739707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:739924-739962:1:exon

position:739924:1
position: 739924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739962:1
position: 739962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:740409-740435:1:exon

position:740409:1
position: 740409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740435:1
position: 740435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:740848-740889:1:exon

position:740848:1
position: 740848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740889:1
position: 740889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:741049-741075:1:exon

position:741049:1
position: 741049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741075:1
position: 741075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:741169-741219:1:exon

position:741169:1
position: 741169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741219:1
position: 741219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:741337-741912:1:exon

position:741337:1
position: 741337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin
translation: MDCPTPMASGRRDRSRHPGRKGRIPHRDRGRSTGGGSEGSSETWSRCRARRRRHPGSRTRCRRRRCPRSWSWRTGSGGSSGEGSGKSRSFWSRGSARSRRRPWLGTRCWRRPRGGARRRRCPRGGRGAVGGQQQQRQLSTAPAFPVSVWAAFPAWCPESEESLAWYPVLEASPGWCPASQVSPGWQGCRRRQQQQRQLSTAPAFPVLVWAAFPAWCPESEASLAWYPGVGGVPGVVPGVAGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGVVPGVAGVPGVAGDCSRSPVPIARLCGAVVAEGPCLPCPQGLPSAAAAAKAAKYGAGVPGVPGVPGVPGVPGVPGVPGVPGVPGVPGVPGAVPGVGVGGPAAAAAAKAAAKAAAIGAGRVPGVGVPGVGVPGVPGVGVPGVGVPGVPGVGVPGLVPGVGVPGGPAAAAKAAAKAAKFGAGGLVPGVGGLVPGVGGLVPGVGGLVPGVGGVPGVGGPAAAAKAAAKAAKFGAGVGGVPGVVPGIGGVPGVGGVPGLVPGVGVPGTGILPGAGIPQVGVQPGAKPPKFGVPGVGVPGVGGLPGGLGVGGLGVGGLGAAGKPPKPGVGVPGFGVSPIFPGGVGGLGFGGKPPKPYGGALGALGFRGAGCAAGKYCGRKRK
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(730058..730078,730494..730558,730831..730875,731039..731119,731209..731268,731953..732057,732141..732183,732758..732895,732979..733020,734300..734438,734522..734563,736516..736779,737017..737142,737224..737280,737417..737554,737639..737686,738410..738511,738713..738766,738936..739058,739243..739290,739666..739707,739924..739962,740409..740435,740848..740889,741049..741075,741169..741219,741337..741383)
location: region:730058-741383:1
so has part: feature:730058-730078:1:exon
so has part: feature:730494-730558:1:exon
so has part: feature:730831-730875:1:exon
so has part: feature:731039-731119:1:exon
so has part: feature:731209-731268:1:exon
so has part: feature:731953-732057:1:exon
so has part: feature:732141-732183:1:exon
so has part: feature:732758-732895:1:exon
so has part: feature:732979-733020:1:exon
so has part: feature:734300-734438:1:exon
so has part: feature:734522-734563:1:exon
so has part: feature:736516-736779:1:exon
so has part: feature:737017-737142:1:exon
so has part: feature:737224-737280:1:exon
so has part: feature:737417-737554:1:exon
so has part: feature:737639-737686:1:exon
so has part: feature:738410-738511:1:exon
so has part: feature:738713-738766:1:exon
so has part: feature:738936-739058:1:exon
so has part: feature:739243-739290:1:exon
so has part: feature:739666-739707:1:exon
so has part: feature:739924-739962:1:exon
so has part: feature:740409-740435:1:exon
so has part: feature:740848-740889:1:exon
so has part: feature:741049-741075:1:exon
so has part: feature:741169-741219:1:exon
so has part: feature:741337-741383:1:exon

XP_039418979.1
type: Protein
SIO_000068: ncbiprotein

position:730058:1
position: 730058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741383:1
position: 741383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730058-730078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730494-730558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730831-730875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731039-731119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731209-731268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731953-732057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732141-732183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:732758-732895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:732979-733020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734300-734438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:734522-734563:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736516-736779:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:737017-737142:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:737224-737280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:737417-737554:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737639-737686:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:738410-738511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738713-738766:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738936-739058:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:739243-739290:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:739666-739707:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:739924-739962:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:740409-740435:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:740848-740889:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:741049-741075:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:741169-741219:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:741337-741383:1:exon

LIMK1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743168..753467
location: region:743168-753467:1
so has part: feature:743168-753467:1:exon
subclass of: SO_0000010

120411027
type: Gene
SIO_000068: ncbigene

position:743168:1
position: 743168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753467:1
position: 753467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743168-753467:1:exon

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LIMK1
product: LIM domain kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_039563088.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(743168..743274,745066..745162,745681..745767,747892..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..753467)
location: region:743168-753467:1
so has part: feature:743168-743274:1:exon
so has part: feature:745066-745162:1:exon
so has part: feature:745681-745767:1:exon
so has part: feature:747892-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-753467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743168-743274:1:exon

position:743274:1
position: 743274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745066-745162:1:exon

position:745066:1
position: 745066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745162:1
position: 745162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745681-745767:1:exon

position:745681:1
position: 745681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745767:1
position: 745767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747892-748030:1:exon

position:747892:1
position: 747892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748030:1
position: 748030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:748654-748763:1:exon

position:748654:1
position: 748654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748763:1
position: 748763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:748844-749035:1:exon

position:748844:1
position: 748844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749035:1
position: 749035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:749797-749902:1:exon

position:749797:1
position: 749797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749902:1
position: 749902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:749990-750174:1:exon

position:749990:1
position: 749990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750174:1
position: 750174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:750250-750433:1:exon

position:750250:1
position: 750250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750433:1
position: 750433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:750516-750602:1:exon

position:750516:1
position: 750516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750602:1
position: 750602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:750813-750944:1:exon

position:750813:1
position: 750813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750944:1
position: 750944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:751056-751115:1:exon

position:751056:1
position: 751056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751115:1
position: 751115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:751218-751283:1:exon

position:751218:1
position: 751218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751283:1
position: 751283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:751372-751528:1:exon

position:751372:1
position: 751372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751528:1
position: 751528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:751615-751670:1:exon

position:751615:1
position: 751615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751670:1
position: 751670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:752151-752308:1:exon

position:752151:1
position: 752151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752308:1
position: 752308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:752399-753467:1:exon

position:752399:1
position: 752399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LIMK1
product: LIM domain kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_039563089.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(743168..743274,745066..745162,747892..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..753467)
location: region:743168-753467:1
so has part: feature:743168-743274:1:exon
so has part: feature:745066-745162:1:exon
so has part: feature:747892-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-753467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743168-743274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745066-745162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747892-748030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748654-748763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748844-749035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749797-749902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749990-750174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750250-750433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750516-750602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750813-750944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751056-751115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751218-751283:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:751372-751528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:751615-751670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752151-752308:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752399-753467:1:exon

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X1
translation: MRLMLLCCTWRDEPMGEDEGTDLPVCASCGQGIYDGQYLQALKADWHADCFRVSPGCVPVRWRRMLAAVLRKSRVLSAGAKCCECGASLSHQYYEKDGRLYCKKDYWARFGELCHGCSEQITKGLVMVAGEQKYHPECFSCLNCRTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPASRIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPRTVRVREVDPDCISPDMKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLLQLTIEHDPHEPLGREPGLAGSPPPAPCSPLHSPAPAPCEDPAAMRQRAVTRSCSTDKSPGSGSVGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRSLIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFLERYCPPACPPSFFPIAVCCCDLDPEKRPSFAKLEQWLEALRMHLEIHLPLSSQLEQLDRAFGETHRREGGLPAPPR
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(743217..743274,745066..745162,745681..745767,747892..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..752549)
location: region:743217-752549:1
so has part: feature:743217-743274:1:exon
so has part: feature:745066-745162:1:exon
so has part: feature:745681-745767:1:exon
so has part: feature:747892-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-752549:1:exon

XP_039419022.1
type: Protein
SIO_000068: ncbiprotein

position:743217:1
position: 743217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752549:1
position: 752549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743217-743274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745066-745162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745681-745767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747892-748030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748654-748763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748844-749035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749797-749902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749990-750174:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750250-750433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750516-750602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750813-750944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751056-751115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:751218-751283:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:751372-751528:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:751615-751670:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752151-752308:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:752399-752549:1:exon

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X2
translation: MRLMLLCCTWRDEPMGEDEGTDLPVCASCGQGIYDGQYLQALKADWHADCFRCCECGASLSHQYYEKDGRLYCKKDYWARFGELCHGCSEQITKGLVMVAGEQKYHPECFSCLNCRTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPASRIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPRTVRVREVDPDCISPDMKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLLQLTIEHDPHEPLGREPGLAGSPPPAPCSPLHSPAPAPCEDPAAMRQRAVTRSCSTDKSPGSGSVGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRSLIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFLERYCPPACPPSFFPIAVCCCDLDPEKRPSFAKLEQWLEALRMHLEIHLPLSSQLEQLDRAFGETHRREGGLPAPPR
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(743217..743274,745066..745162,747892..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..752549)
location: region:743217-752549:1
so has part: feature:743217-743274:1:exon
so has part: feature:745066-745162:1:exon
so has part: feature:747892-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-752549:1:exon

XP_039419023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743217-743274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745066-745162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747892-748030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748654-748763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748844-749035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749797-749902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749990-750174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750250-750433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750516-750602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750813-750944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751056-751115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751218-751283:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:751372-751528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:751615-751670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752151-752308:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752399-752549:1:exon

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LIMK1
product: LIM domain kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_039563090.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(745700..745767,747446..747509,747892..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..753467)
location: region:745700-753467:1
so has part: feature:745700-745767:1:exon
so has part: feature:747446-747509:1:exon
so has part: feature:747892-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-753467:1:exon

position:745700:1
position: 745700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745700-745767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747446-747509:1:exon

position:747446:1
position: 747446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747509:1
position: 747509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747892-748030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748654-748763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748844-749035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749797-749902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749990-750174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750250-750433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750516-750602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750813-750944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751056-751115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751218-751283:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:751372-751528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:751615-751670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752151-752308:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752399-753467:1:exon

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X3
translation: MVAGEQKYHPECFSCLNCRTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPASRIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPRTVRVREVDPDCISPDMKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLLQLTIEHDPHEPLGREPGLAGSPPPAPCSPLHSPAPAPCEDPAAMRQRAVTRSCSTDKSPGSGSVGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRSLIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFLERYCPPACPPSFFPIAVCCCDLDPEKRPSFAKLEQWLEALRMHLEIHLPLSSQLEQLDRAFGETHRREGGLPAPPR
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(748028..748030,748654..748763,748844..749035,749797..749902,749990..750174,750250..750433,750516..750602,750813..750944,751056..751115,751218..751283,751372..751528,751615..751670,752151..752308,752399..752549)
location: region:748028-752549:1
so has part: feature:748028-748030:1:exon
so has part: feature:748654-748763:1:exon
so has part: feature:748844-749035:1:exon
so has part: feature:749797-749902:1:exon
so has part: feature:749990-750174:1:exon
so has part: feature:750250-750433:1:exon
so has part: feature:750516-750602:1:exon
so has part: feature:750813-750944:1:exon
so has part: feature:751056-751115:1:exon
so has part: feature:751218-751283:1:exon
so has part: feature:751372-751528:1:exon
so has part: feature:751615-751670:1:exon
so has part: feature:752151-752308:1:exon
so has part: feature:752399-752549:1:exon

XP_039419024.1
type: Protein
SIO_000068: ncbiprotein

position:748028:1
position: 748028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748028-748030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748654-748763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748844-749035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749797-749902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749990-750174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:750250-750433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750516-750602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750813-750944:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751056-751115:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751218-751283:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751372-751528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751615-751670:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752151-752308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752399-752549:1:exon

SEPTIN4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 759974..772845
location: region:759974-772845:1
so has part: feature:759974-772845:1:exon
subclass of: SO_0000010

104695779
type: Gene
SIO_000068: ncbigene

position:759974:1
position: 759974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772845:1
position: 772845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759974-772845:1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SEPTIN4
product: septin-4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039563067.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(759974..760067,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..772845)
location: region:759974-772845:1
so has part: feature:759974-760067:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-772845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759974-760067:1:exon

position:760067:1
position: 760067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764863-765162:1:exon

position:764863:1
position: 764863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765162:1
position: 765162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:765386-765479:1:exon

position:765386:1
position: 765386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765479:1
position: 765479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:765595-765681:1:exon

position:765595:1
position: 765595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765681:1
position: 765681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:766502-766625:1:exon

position:766502:1
position: 766502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766625:1
position: 766625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:767007-767141:1:exon

position:767007:1
position: 767007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767141:1
position: 767141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:767220-767337:1:exon

position:767220:1
position: 767220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767337:1
position: 767337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767658-767759:1:exon

position:767658:1
position: 767658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767759:1
position: 767759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:768107-768203:1:exon

position:768107:1
position: 768107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768203:1
position: 768203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768325-768487:1:exon

position:768325:1
position: 768325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768487:1
position: 768487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:770647-770746:1:exon

position:770647:1
position: 770647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770746:1
position: 770746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:771023-772845:1:exon

position:771023:1
position: 771023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X4
translation: MIKRFLKEDSDEAELTQFLRDCPPADSSRKVEAPEIRREPGHPLGSVGRVPPDEASDERDARLFSRSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPAHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDVETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(760065..760067,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..771082)
location: region:760065-771082:1
so has part: feature:760065-760067:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-771082:1:exon

XP_039419001.1
type: Protein
SIO_000068: ncbiprotein

position:760065:1
position: 760065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771082:1
position: 771082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760065-760067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:771023-771082:1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SEPTIN4
product: septin-4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039563064.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(762999..763135,764496..764624,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..772845)
location: region:762999-772845:1
so has part: feature:762999-763135:1:exon
so has part: feature:764496-764624:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-772845:1:exon

position:762999:1
position: 762999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762999-763135:1:exon

position:763135:1
position: 763135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764496-764624:1:exon

position:764496:1
position: 764496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764624:1
position: 764624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:771023-772845:1:exon

SEPTIN4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: SEPTIN4
product: septin-4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005603420.1
SIO_010081: SEPTIN4
so part of: SEPTIN4
location: join(762999..763135,764496..764624,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..771189,772701..772845)
location: region:762999-772845:1
so has part: feature:762999-763135:1:exon
so has part: feature:764496-764624:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-771189:1:exon
so has part: feature:772701-772845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762999-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764496-764624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:771023-771189:1:exon

position:771189:1
position: 771189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:772701-772845:1:exon

position:772701:1
position: 772701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SEPTIN4
product: septin-4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_039563066.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(762999..763135,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..772845)
location: region:762999-772845:1
so has part: feature:762999-763135:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-772845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762999-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:771023-772845:1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SEPTIN4
product: septin-4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039563065.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(762999..763135,764496..764624,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,769331..769465)
location: region:762999-769465:1
so has part: feature:762999-763135:1:exon
so has part: feature:764496-764624:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:769331-769465:1:exon

position:769465:1
position: 769465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762999-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764496-764624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769331-769465:1:exon

position:769331:1
position: 769331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-5 isoform X1
translation: MATCPELQPGQEAMGRGGVLAAPEDPEERRGAQGEGAHPCPPECQELAAIPTPQAIKRFLKEDSDEAELTQFLRDCPPADSSRKVEAPEIRREPGHPLGSVGRVPPDEASDERDARLFSRSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPAHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDVETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(763100..763135,764496..764624,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..771082)
location: region:763100-771082:1
so has part: feature:763100-763135:1:exon
so has part: feature:764496-764624:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-771082:1:exon

XP_039418998.1
type: Protein
SIO_000068: ncbiprotein

position:763100:1
position: 763100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763100-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764496-764624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:771023-771082:1:exon

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X3
translation: MATCPELQPGQEIKRFLKEDSDEAELTQFLRDCPPADSSRKVEAPEIRREPGHPLGSVGRVPPDEASDERDARLFSRSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPAHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDVETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(763100..763135,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,770647..770746,771023..771082)
location: region:763100-771082:1
so has part: feature:763100-763135:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:770647-770746:1:exon
so has part: feature:771023-771082:1:exon

XP_039419000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:763100-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:770647-770746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:771023-771082:1:exon

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-5 isoform X2
translation: MATCPELQPGQEAMGRGGVLAAPEDPEERRGAQGEGAHPCPPECQELAAIPTPQAIKRFLKEDSDEAELTQFLRDCPPADSSRKVEAPEIRREPGHPLGSVGRVPPDEASDERDARLFSRSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPAHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRKSHPSVLRLCCGDCSAD
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(763100..763135,764496..764624,764863..765162,765386..765479,765595..765681,766502..766625,767007..767141,767220..767337,767658..767759,768107..768203,768325..768487,769331..769382)
location: region:763100-769382:1
so has part: feature:763100-763135:1:exon
so has part: feature:764496-764624:1:exon
so has part: feature:764863-765162:1:exon
so has part: feature:765386-765479:1:exon
so has part: feature:765595-765681:1:exon
so has part: feature:766502-766625:1:exon
so has part: feature:767007-767141:1:exon
so has part: feature:767220-767337:1:exon
so has part: feature:767658-767759:1:exon
so has part: feature:768107-768203:1:exon
so has part: feature:768325-768487:1:exon
so has part: feature:769331-769382:1:exon

XP_039418999.1
type: Protein
SIO_000068: ncbiprotein

position:769382:1
position: 769382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763100-763135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764496-764624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764863-765162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765386-765479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765595-765681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766502-766625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767007-767141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767220-767337:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767658-767759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768107-768203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768325-768487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769331-769382:1:exon

CCDC183
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(777372..783639)
location: region:777372-783639:-1
so has part: feature:777372-783639:-1:exon
subclass of: SO_0000010

104695798
type: Gene
SIO_000068: ncbigene

position:777372:-1
position: 777372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783639:-1
position: 783639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777372-783639:-1:exon

CCDC183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CCDC183
product: coiled-coil domain containing 183
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039563163.1
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(777372..777699,778154..778263,778466..778585,778690..779342,779594..779834,780676..780804,781408..781515,781683..781787,781916..782083,782845..782916,783046..783167,783248..783639))
location: region:777372-783639:-1
so has part: feature:783248-783639:-1:exon
so has part: feature:783046-783167:-1:exon
so has part: feature:782845-782916:-1:exon
so has part: feature:781916-782083:-1:exon
so has part: feature:781683-781787:-1:exon
so has part: feature:781408-781515:-1:exon
so has part: feature:780676-780804:-1:exon
so has part: feature:779594-779834:-1:exon
so has part: feature:778690-779342:-1:exon
so has part: feature:778466-778585:-1:exon
so has part: feature:778154-778263:-1:exon
so has part: feature:777372-777699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783248-783639:-1:exon

position:783248:-1
position: 783248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:783046-783167:-1:exon

position:783046:-1
position: 783046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783167:-1
position: 783167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782845-782916:-1:exon

position:782845:-1
position: 782845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782916:-1
position: 782916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781916-782083:-1:exon

position:781916:-1
position: 781916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782083:-1
position: 782083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:781683-781787:-1:exon

position:781683:-1
position: 781683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781787:-1
position: 781787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:781408-781515:-1:exon

position:781408:-1
position: 781408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781515:-1
position: 781515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:780676-780804:-1:exon

position:780676:-1
position: 780676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780804:-1
position: 780804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:779594-779834:-1:exon

position:779594:-1
position: 779594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779834:-1
position: 779834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:778690-779342:-1:exon

position:778690:-1
position: 778690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779342:-1
position: 779342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:778466-778585:-1:exon

position:778466:-1
position: 778466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778585:-1
position: 778585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:778154-778263:-1:exon

position:778154:-1
position: 778154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778263:-1
position: 778263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:777372-777699:-1:exon

position:777699:-1
position: 777699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CCDC183
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 183
translation: MEAPGSTQGPKADLSQRSQELRVLVALQEQGGKIFAQSCEEKLRQNRELLPSLQAALQEDSSILDFVLKYNKLPIKDAFGEGQELIPATQSVEAVQKKIEAKIHDQVKVCDMLLHQLKQWSQARDERQRHLQELQDAETDPKWQEPQLQTIRQLGNDIEKMVMKIHSGQIVTNLYLKLQENLRRELVYLPQYLDLLCGMTVMYHDELTARSNLKANDVLRKLMAEAGPQVRVEKQLRDQSLAEQRMQIESLRQQEESERQQRRQAVSMLSAEHELSSSETAVGECLAGGRAGGRGRGHGHPAPLLPCHPGAEAEAAVAKREREAFVTDKMEKAKSALQCSCLWDIPSSIQAQKKSLESLQQHIDECRERKKVLKKTLQELELKQAKLKFSQPISTIRCCWPRTVVPTRPPPLGGHVPGGTLTSVPLQPPSPRALGGSRAPGSGAGREPKASPGVPELPFSLPGTGSAASSMELGCSWGWGEPEPFGAALGCPCAPLQLCDVSATGSRLREEELSENLQQEEARLEQMRAQMLRNQKRLIEFENIIDNLFLRLQGIFIPDQDESVAVVGLEEKLQHCEQKMQLLKERVAARPKDSTDERSETFAKVRNLLEKRTAGETQNLKISFEDEDTMEDGRRAWHHQVLQVALGCWGGKAQEDSRGSHKPHKLCQLSQGRGHSRGGPQPLPSPSCPLSPPDTLDFEDEDHDYIPSREDIKKQGLQLIRMNTRRRKKK
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(777417..777699,778154..778263,778466..778585,778690..779342,779594..779834,780676..780804,781408..781515,781683..781787,781916..782083,782845..782916,783046..783167,783248..783332))
location: region:777417-783332:-1
so has part: feature:783248-783332:-1:exon
so has part: feature:783046-783167:-1:exon
so has part: feature:782845-782916:-1:exon
so has part: feature:781916-782083:-1:exon
so has part: feature:781683-781787:-1:exon
so has part: feature:781408-781515:-1:exon
so has part: feature:780676-780804:-1:exon
so has part: feature:779594-779834:-1:exon
so has part: feature:778690-779342:-1:exon
so has part: feature:778466-778585:-1:exon
so has part: feature:778154-778263:-1:exon
so has part: feature:777417-777699:-1:exon

XP_039419097.1
type: Protein
SIO_000068: ncbiprotein

position:777417:-1
position: 777417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783332:-1
position: 783332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783248-783332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783046-783167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782845-782916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781916-782083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781683-781787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781408-781515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:780676-780804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:779594-779834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778690-779342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:778466-778585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:778154-778263:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777417-777699:-1:exon

SBDS
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(783797..789974)
location: region:783797-789974:-1
so has part: feature:783797-789974:-1:exon
subclass of: SO_0000010

104695797
type: Gene
SIO_000068: ncbigene

position:783797:-1
position: 783797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789974:-1
position: 789974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783797-789974:-1:exon

SBDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SBDS
product: SBDS ribosome maturation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039562821.1
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(783797..786184,786816..786980,787548..787748,788984..789113,789794..789974))
location: region:783797-789974:-1
so has part: feature:789794-789974:-1:exon
so has part: feature:788984-789113:-1:exon
so has part: feature:787548-787748:-1:exon
so has part: feature:786816-786980:-1:exon
so has part: feature:783797-786184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789794-789974:-1:exon

position:789794:-1
position: 789794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788984-789113:-1:exon

position:788984:-1
position: 788984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789113:-1
position: 789113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787548-787748:-1:exon

position:787548:-1
position: 787548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787748:-1
position: 787748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:786816-786980:-1:exon

position:786816:-1
position: 786816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786980:-1
position: 786980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783797-786184:-1:exon

position:786184:-1
position: 786184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome maturation protein SBDS
translation: MSIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDLDEVLQTHTVFVNVSKGQVAKKEDLVQAFGTDDQTEICKMILSKGELQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPTKSTKQQALEVIRQLKETMQIERAHMRLRFILPAKEGKKLKEKLKPLIKVIESEDFQEQLEIVCLIDPGCFREIDELIRSETKGKGSLEVLSLKDVEEGDEKLE
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(786056..786184,786816..786980,787548..787748,788984..789113,789794..789921))
location: region:786056-789921:-1
so has part: feature:789794-789921:-1:exon
so has part: feature:788984-789113:-1:exon
so has part: feature:787548-787748:-1:exon
so has part: feature:786816-786980:-1:exon
so has part: feature:786056-786184:-1:exon

XP_039418755.1
type: Protein
SIO_000068: ncbiprotein

position:786056:-1
position: 786056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789921:-1
position: 789921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789794-789921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788984-789113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787548-787748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786816-786980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786056-786184:-1:exon

LOC104695778
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789990..878548
location: region:789990-878548:1
so has part: feature:789990-878548:1:exon
subclass of: SO_0000010

104695778
type: Gene
SIO_000068: ncbigene

position:789990:1
position: 789990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878548:1
position: 878548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789990-878548:1:exon

LOC104695778
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695778
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_039562816.1
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(789990..790034,791310..791436,791566..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..878548)
location: region:789990-878548:1
so has part: feature:789990-790034:1:exon
so has part: feature:791310-791436:1:exon
so has part: feature:791566-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-878548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789990-790034:1:exon

position:790034:1
position: 790034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791310-791436:1:exon

position:791310:1
position: 791310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791436:1
position: 791436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:791566-791732:1:exon

position:791566:1
position: 791566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791732:1
position: 791732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792347-792487:1:exon

position:792347:1
position: 792347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792487:1
position: 792487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793025-793126:1:exon

position:793025:1
position: 793025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793126:1
position: 793126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793978-794172:1:exon

position:793978:1
position: 793978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794172:1
position: 794172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:795516-795797:1:exon

position:795516:1
position: 795516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795797:1
position: 795797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:796673-796780:1:exon

position:796673:1
position: 796673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796780:1
position: 796780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:807957-808062:1:exon

position:807957:1
position: 807957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808062:1
position: 808062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820817-820869:1:exon

position:820817:1
position: 820817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820869:1
position: 820869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:824106-824224:1:exon

position:824106:1
position: 824106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824224:1
position: 824224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:832626-832735:1:exon

position:832626:1
position: 832626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832735:1
position: 832735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:838315-838492:1:exon

position:838315:1
position: 838315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838492:1
position: 838492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:842698-842833:1:exon

position:842698:1
position: 842698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842833:1
position: 842833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:861788-861898:1:exon

position:861788:1
position: 861788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861898:1
position: 861898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:869128-869295:1:exon

position:869128:1
position: 869128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869295:1
position: 869295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:877459-878548:1:exon

position:877459:1
position: 877459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695778
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695778
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039562819.1
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(789990..790034,791310..791436,791566..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,877459..878548)
location: region:789990-878548:1
so has part: feature:789990-790034:1:exon
so has part: feature:791310-791436:1:exon
so has part: feature:791566-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:877459-878548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789990-790034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791310-791436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791566-791732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:877459-878548:1:exon

LOC104695778
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695778
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039562818.1
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(789990..790034,791310..791436,791584..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..878548)
location: region:789990-878548:1
so has part: feature:789990-790034:1:exon
so has part: feature:791310-791436:1:exon
so has part: feature:791584-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-878548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789990-790034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791310-791436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791584-791732:1:exon

position:791584:1
position: 791584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869128-869295:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:877459-878548:1:exon

LOC104695778
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695778
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039562820.1
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(789990..790034,791310..791436,791566..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,865018..865286)
location: region:789990-865286:1
so has part: feature:789990-790034:1:exon
so has part: feature:791310-791436:1:exon
so has part: feature:791566-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:865018-865286:1:exon

position:865286:1
position: 865286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789990-790034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791310-791436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791566-791732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:865018-865286:1:exon

position:865018:1
position: 865018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104695778
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104695778
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039562817.1
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(790087..790131,791310..791436,791566..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..878548)
location: region:790087-878548:1
so has part: feature:790087-790131:1:exon
so has part: feature:791310-791436:1:exon
so has part: feature:791566-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-878548:1:exon

position:790087:1
position: 790087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790087-790131:1:exon

position:790131:1
position: 790131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791310-791436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791566-791732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869128-869295:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:877459-878548:1:exon

LOC104695778
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
translation: MDTWSYFHTCLVSIWLHRFYIYFAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTADKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLARLQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKGVTYCGESSASSLTMANVPWHGEVVSFVQELARLLPDYGIACEHEHSNCVLMAHSKFQVDGEWRTWIDYGRFQELVREHEQSGGSRTFSAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDISGC
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(791598..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..877680)
location: region:791598-877680:1
so has part: feature:791598-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-877680:1:exon

XP_039418750.1
type: Protein
SIO_000068: ncbiprotein

position:791598:1
position: 791598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877680:1
position: 877680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791598-791732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869128-869295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:877459-877680:1:exon

LOC104695778
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
translation: MDTWSYFHTCLVSIWLHRFYIYFAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTADKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLARLQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKGVTYCGESSASSLTMANVPWHGEVVSFVQELARLLPDYGIACEHEHSNCVLMAHSKFQVDGEWRTWIDYGRFQELVREHEQSGGSRTFSAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDISGC
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(791598..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..877680)
location: region:791598-877680:1
so has part: feature:791598-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-877680:1:exon

XP_039418751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:791598-791732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869128-869295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:877459-877680:1:exon

LOC104695778
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
translation: MDTWSYFHTCLVSIWLHRFYIYFAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTADKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLARLQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKGVTYCGESSASSLTMANVPWHGEVVSFVQELARLLPDYGIACEHEHSNCVLMAHSKFQVDGEWRTWIDYGRFQELVREHEQSGGSRTFSAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDISGC
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(791598..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,869128..869295,877459..877680)
location: region:791598-877680:1
so has part: feature:791598-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:869128-869295:1:exon
so has part: feature:877459-877680:1:exon

XP_039418752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:791598-791732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869128-869295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:877459-877680:1:exon

LOC104695778
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X2
translation: MDTWSYFHTCLVSIWLHRFYIYFAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTADKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLARLQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKFQVDGEWRTWIDYGRFQELVREHEQSGGSRTFSAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDISGC
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(791598..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,877459..877680)
location: region:791598-877680:1
so has part: feature:791598-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:877459-877680:1:exon

XP_039418753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:791598-791732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:877459-877680:1:exon

LOC104695778
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104695778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X3
translation: MDTWSYFHTCLVSIWLHRFYIYFAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTADKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLARLQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKQEAIAPPVKIPFRILLPSQLGFR
SIO_010081: LOC104695778
subclass of: SO_0000673
so part of: LOC104695778
location: join(791598..791732,792347..792487,793025..793126,793978..794172,795516..795797,796673..796780,807957..808062,820817..820869,824106..824224,832626..832735,838315..838492,842698..842833,861788..861898,865018..865089)
location: region:791598-865089:1
so has part: feature:791598-791732:1:exon
so has part: feature:792347-792487:1:exon
so has part: feature:793025-793126:1:exon
so has part: feature:793978-794172:1:exon
so has part: feature:795516-795797:1:exon
so has part: feature:796673-796780:1:exon
so has part: feature:807957-808062:1:exon
so has part: feature:820817-820869:1:exon
so has part: feature:824106-824224:1:exon
so has part: feature:832626-832735:1:exon
so has part: feature:838315-838492:1:exon
so has part: feature:842698-842833:1:exon
so has part: feature:861788-861898:1:exon
so has part: feature:865018-865089:1:exon

XP_039418754.1
type: Protein
SIO_000068: ncbiprotein

position:865089:1
position: 865089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791598-791732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792347-792487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793025-793126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793978-794172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:795516-795797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796673-796780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807957-808062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820817-820869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824106-824224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:832626-832735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838315-838492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842698-842833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861788-861898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:865018-865089:1:exon

LOC109146002
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 889590..892611
location: region:889590-892611:1
so has part: feature:889590-892611:1:exon
subclass of: SO_0000011

109146002
type: Gene
SIO_000068: ncbigene

position:889590:1
position: 889590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892611:1
position: 892611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889590-892611:1:exon

LOC109146002
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146002
product: uncharacterized LOC109146002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002047755.3
SIO_010081: LOC109146002
subclass of: SO_0000673
so part of: LOC109146002
location: join(889590..892086,892254..892611)
location: region:889590-892611:1
so has part: feature:889590-892086:1:exon
so has part: feature:892254-892611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889590-892086:1:exon

position:892086:1
position: 892086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892254-892611:1:exon

position:892254:1
position: 892254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALN1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 907894..1057829
location: region:907894-1057829:1
so has part: feature:907894-1057829:1:exon
subclass of: SO_0000010

104695777
type: Gene
SIO_000068: ncbigene

position:907894:1
position: 907894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057829:1
position: 1057829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907894-1057829:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039562909.1
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(907894..908380,926763..926957,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:907894-1057829:1
so has part: feature:907894-908380:1:exon
so has part: feature:926763-926957:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907894-908380:1:exon

position:908380:1
position: 908380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926763-926957:1:exon

position:926763:1
position: 926763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926957:1
position: 926957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950229-950353:1:exon

position:950229:1
position: 950229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950353:1
position: 950353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:993421-993564:1:exon

position:993421:1
position: 993421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993564:1
position: 993564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1009497-1009609:1:exon

position:1009497:1
position: 1009497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009609:1
position: 1009609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1044635-1044788:1:exon

position:1044635:1
position: 1044635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044788:1
position: 1044788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1051069-1057829:1:exon

position:1051069:1
position: 1051069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039562910.1
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(910442..910665,926763..926957,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:910442-1057829:1
so has part: feature:910442-910665:1:exon
so has part: feature:926763-926957:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

position:910442:1
position: 910442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910442-910665:1:exon

position:910665:1
position: 910665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926763-926957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1051069-1057829:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X1
translation: MGLIQEPAEGQPKHEGGRGDEAPGEKEEPPQRSRQPEFPSWEKMPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(926836..926957,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:926836-1051196:1
so has part: feature:926836-926957:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_039418843.1
type: Protein
SIO_000068: ncbiprotein

position:926836:1
position: 926836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051196:1
position: 1051196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926836-926957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1051196:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X1
translation: MGLIQEPAEGQPKHEGGRGDEAPGEKEEPPQRSRQPEFPSWEKMPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(926836..926957,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:926836-1051196:1
so has part: feature:926836-926957:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_039418844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:926836-926957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1051196:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039562911.1
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(935179..935472,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:935179-1057829:1
so has part: feature:935179-935472:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

position:935179:1
position: 935179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935179-935472:1:exon

position:935472:1
position: 935472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1057829:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010409782.3
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(936520..937062,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:936520-1057829:1
so has part: feature:936520-937062:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

position:936520:1
position: 936520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936520-937062:1:exon

position:937062:1
position: 937062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1057829:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010409780.4
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(937841..937940,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:937841-1057829:1
so has part: feature:937841-937940:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

position:937841:1
position: 937841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937841-937940:1:exon

position:937940:1
position: 937940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1057829:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X2
translation: MAGPVRLPPPPGKLPLEKMPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(937894..937940,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:937894-1051196:1
so has part: feature:937894-937940:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_010408082.1
type: Protein
SIO_000068: ncbiprotein

position:937894:1
position: 937894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937894-937940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1051196:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CALN1
product: calneuron 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019292116.2
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(938858..938882,950229..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1057829)
location: region:938858-1057829:1
so has part: feature:938858-938882:1:exon
so has part: feature:950229-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1057829:1:exon

position:938858:1
position: 938858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938858-938882:1:exon

position:938882:1
position: 938882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950229-950353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051069-1057829:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X3
translation: MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(950236..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:950236-1051196:1
so has part: feature:950236-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_019147661.1
type: Protein
SIO_000068: ncbiprotein

position:950236:1
position: 950236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950236-950353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051069-1051196:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X3
translation: MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(950236..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:950236-1051196:1
so has part: feature:950236-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_039418845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950236-950353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051069-1051196:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X3
translation: MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(950236..950353,993421..993564,1009497..1009609,1044635..1044788,1051069..1051196)
location: region:950236-1051196:1
so has part: feature:950236-950353:1:exon
so has part: feature:993421-993564:1:exon
so has part: feature:1009497-1009609:1:exon
so has part: feature:1044635-1044788:1:exon
so has part: feature:1051069-1051196:1:exon

XP_010408084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950236-950353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993421-993564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009497-1009609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044635-1044788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051069-1051196:1:exon

GALNT17
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GALNT17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1088748..1298393)
location: region:1088748-1298393:-1
so has part: feature:1088748-1298393:-1:exon
subclass of: SO_0000010

104695776
type: Gene
SIO_000068: ncbigene

position:1088748:-1
position: 1088748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298393:-1
position: 1298393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088748-1298393:-1:exon

GALNT17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GALNT17
product: polypeptide N-acetylgalactosaminyltransferase 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_010409779.3
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1088748..1091419,1092050..1092217,1098934..1099029,1100668..1100805,1103858..1104043,1159691..1159808,1208154..1208351,1210000..1210174,1218651..1218817,1242225..1242408,1297770..1298393))
location: region:1088748-1298393:-1
so has part: feature:1297770-1298393:-1:exon
so has part: feature:1242225-1242408:-1:exon
so has part: feature:1218651-1218817:-1:exon
so has part: feature:1210000-1210174:-1:exon
so has part: feature:1208154-1208351:-1:exon
so has part: feature:1159691-1159808:-1:exon
so has part: feature:1103858-1104043:-1:exon
so has part: feature:1100668-1100805:-1:exon
so has part: feature:1098934-1099029:-1:exon
so has part: feature:1092050-1092217:-1:exon
so has part: feature:1088748-1091419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1297770-1298393:-1:exon

position:1297770:-1
position: 1297770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242225-1242408:-1:exon

position:1242225:-1
position: 1242225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242408:-1
position: 1242408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1218651-1218817:-1:exon

position:1218651:-1
position: 1218651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218817:-1
position: 1218817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1210000-1210174:-1:exon

position:1210000:-1
position: 1210000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210174:-1
position: 1210174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1208154-1208351:-1:exon

position:1208154:-1
position: 1208154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208351:-1
position: 1208351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1159691-1159808:-1:exon

position:1159691:-1
position: 1159691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159808:-1
position: 1159808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1103858-1104043:-1:exon

position:1103858:-1
position: 1103858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104043:-1
position: 1104043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1100668-1100805:-1:exon

position:1100668:-1
position: 1100668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100805:-1
position: 1100805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1098934-1099029:-1:exon

position:1098934:-1
position: 1098934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099029:-1
position: 1099029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1092050-1092217:-1:exon

position:1092050:-1
position: 1092050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092217:-1
position: 1092217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1088748-1091419:-1:exon

position:1091419:-1
position: 1091419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GALNT17
product: polypeptide N-acetylgalactosaminyltransferase 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039562777.1
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1088748..1091419,1092050..1092217,1098934..1099029,1100668..1100805,1103858..1104043,1159691..1159808,1169161..1169165,1171651..1171656))
location: region:1088748-1171656:-1
so has part: feature:1171651-1171656:-1:exon
so has part: feature:1169161-1169165:-1:exon
so has part: feature:1159691-1159808:-1:exon
so has part: feature:1103858-1104043:-1:exon
so has part: feature:1100668-1100805:-1:exon
so has part: feature:1098934-1099029:-1:exon
so has part: feature:1092050-1092217:-1:exon
so has part: feature:1088748-1091419:-1:exon

position:1171656:-1
position: 1171656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171651-1171656:-1:exon

position:1171651:-1
position: 1171651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169161-1169165:-1:exon

position:1169161:-1
position: 1169161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169165:-1
position: 1169165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159691-1159808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103858-1104043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100668-1100805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098934-1099029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1092050-1092217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088748-1091419:-1:exon

GALNT17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GALNT17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 17 isoform X1
translation: MASLRRVKVLLVLNLIAVAGFVLFLAKCRPITTKSSDSFHDIHPRAEVANLTAHGISSIQDAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYGKDLPQISIIFIFVNEALSVILRSVHSAVNHTPAPLLKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATGQVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGYSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKWHVYIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLDQGPQENHTAILYPCHGWGPQLARYTREGFLHLGALGTTTLLPDTRCLVDNGKSRFPQLLDCDKVKSSLHKRWNFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1091291..1091419,1092050..1092217,1098934..1099029,1100668..1100805,1103858..1104043,1159691..1159808,1208154..1208351,1210000..1210174,1218651..1218817,1242225..1242408,1297770..1298007))
location: region:1091291-1298007:-1
so has part: feature:1297770-1298007:-1:exon
so has part: feature:1242225-1242408:-1:exon
so has part: feature:1218651-1218817:-1:exon
so has part: feature:1210000-1210174:-1:exon
so has part: feature:1208154-1208351:-1:exon
so has part: feature:1159691-1159808:-1:exon
so has part: feature:1103858-1104043:-1:exon
so has part: feature:1100668-1100805:-1:exon
so has part: feature:1098934-1099029:-1:exon
so has part: feature:1092050-1092217:-1:exon
so has part: feature:1091291-1091419:-1:exon

XP_010408081.1
type: Protein
SIO_000068: ncbiprotein

position:1091291:-1
position: 1091291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298007:-1
position: 1298007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297770-1298007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242225-1242408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218651-1218817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210000-1210174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208154-1208351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159691-1159808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1103858-1104043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100668-1100805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1098934-1099029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092050-1092217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1091291-1091419:-1:exon

GALNT17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GALNT17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 17 isoform X2
translation: MIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKWHVYIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLDQGPQENHTAILYPCHGWGPQLARYTREGFLHLGALGTTTLLPDTRCLVDNGKSRFPQLLDCDKVKSSLHKRWNFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1091291..1091419,1092050..1092217,1098934..1099029,1100668..1100805,1103858..1104043,1159691..1159798))
location: region:1091291-1159798:-1
so has part: feature:1159691-1159798:-1:exon
so has part: feature:1103858-1104043:-1:exon
so has part: feature:1100668-1100805:-1:exon
so has part: feature:1098934-1099029:-1:exon
so has part: feature:1092050-1092217:-1:exon
so has part: feature:1091291-1091419:-1:exon

XP_039418711.1
type: Protein
SIO_000068: ncbiprotein

position:1159798:-1
position: 1159798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159691-1159798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103858-1104043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100668-1100805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098934-1099029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092050-1092217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1091291-1091419:-1:exon

AUTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1368352..2135865)
location: region:1368352-2135865:-1
so has part: feature:1368352-2135865:-1:exon
subclass of: SO_0000010

104695796
type: Gene
SIO_000068: ncbigene

position:1368352:-1
position: 1368352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135865:-1
position: 2135865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368352-2135865:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AUTS2
product: activator of transcription and developmental regulator AUTS2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039562718.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1368352..1371506,1375411..1375633,1376496..1376579,1377877..1377954,1378465..1378606,1382122..1382193,1383707..1383736,1385351..1385422,1386695..1386790,1390918..1390962,1391396..1391616,1393124..1393377,1394952..1395435,1438901..1438949,1609148..1609177,1784011..1784046,1792347..1792448,1932303..1932512,2135376..2135865))
location: region:1368352-2135865:-1
so has part: feature:2135376-2135865:-1:exon
so has part: feature:1932303-1932512:-1:exon
so has part: feature:1792347-1792448:-1:exon
so has part: feature:1784011-1784046:-1:exon
so has part: feature:1609148-1609177:-1:exon
so has part: feature:1438901-1438949:-1:exon
so has part: feature:1394952-1395435:-1:exon
so has part: feature:1393124-1393377:-1:exon
so has part: feature:1391396-1391616:-1:exon
so has part: feature:1390918-1390962:-1:exon
so has part: feature:1386695-1386790:-1:exon
so has part: feature:1385351-1385422:-1:exon
so has part: feature:1383707-1383736:-1:exon
so has part: feature:1382122-1382193:-1:exon
so has part: feature:1378465-1378606:-1:exon
so has part: feature:1377877-1377954:-1:exon
so has part: feature:1376496-1376579:-1:exon
so has part: feature:1375411-1375633:-1:exon
so has part: feature:1368352-1371506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135376-2135865:-1:exon

position:2135376:-1
position: 2135376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932303-1932512:-1:exon

position:1932303:-1
position: 1932303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932512:-1
position: 1932512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1792347-1792448:-1:exon

position:1792347:-1
position: 1792347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792448:-1
position: 1792448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1784011-1784046:-1:exon

position:1784011:-1
position: 1784011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784046:-1
position: 1784046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1609148-1609177:-1:exon

position:1609148:-1
position: 1609148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609177:-1
position: 1609177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1438901-1438949:-1:exon

position:1438901:-1
position: 1438901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438949:-1
position: 1438949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1394952-1395435:-1:exon

position:1394952:-1
position: 1394952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395435:-1
position: 1395435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1393124-1393377:-1:exon

position:1393124:-1
position: 1393124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393377:-1
position: 1393377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1391396-1391616:-1:exon

position:1391396:-1
position: 1391396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391616:-1
position: 1391616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1390918-1390962:-1:exon

position:1390918:-1
position: 1390918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390962:-1
position: 1390962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1386695-1386790:-1:exon

position:1386695:-1
position: 1386695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386790:-1
position: 1386790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1385351-1385422:-1:exon

position:1385351:-1
position: 1385351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385422:-1
position: 1385422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1383707-1383736:-1:exon

position:1383707:-1
position: 1383707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383736:-1
position: 1383736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1382122-1382193:-1:exon

position:1382122:-1
position: 1382122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382193:-1
position: 1382193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1378465-1378606:-1:exon

position:1378465:-1
position: 1378465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378606:-1
position: 1378606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1377877-1377954:-1:exon

position:1377877:-1
position: 1377877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377954:-1
position: 1377954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1376496-1376579:-1:exon

position:1376496:-1
position: 1376496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376579:-1
position: 1376579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1375411-1375633:-1:exon

position:1375411:-1
position: 1375411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375633:-1
position: 1375633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1368352-1371506:-1:exon

position:1371506:-1
position: 1371506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AUTS2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: autism susceptibility gene 2 protein
translation: MDGPARCNGLRKKRRSRSQRDRXRRAKGGRRGCAAGGAAGPGAAALSSSGSEKEDNGPPPPSRPRPPRRKRRESSSAEEDIIDGFAMSSFVTFEALEKDVALKPQERVEKRQNPLAKKKREALTNGLSYLPKKNRLHHHQYSSDRENDRNLCQHLGKKKKLPKGLRQLKPGQNSCRDSDSESASGESKGFQRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEKLFNAVTNKDKELGVGALADNDDPGARGPAVPKISGLERSQEKSQDSSKDPILEPVVPKDPRPQVTPPPLEPPEGRCPSPVLAPRPEAPAPPPAPAVPLPPAPEEPGRPSAGQPSGQPPAGQPPAGQHPPRPQSPLPPAHPALPAVQPHPQSLSQPLSAYNSSSLSLNSLSSSRSSPPAKTQAPPPHISHHPSASPFPLSLASHSPLHSFPPALQPPAHPHHPNMFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPTVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSSEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYVSEKEGLSHESRVVEESKQMPRVPSPYARPPVVESTRPNSTSNREADRKNEPAYDNPKKSNEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDAMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHPLSVDPRREHERGTHLDERERLHMLREDYEHARLHSVHPAALDGHLPHPGLLTPGLPSMHYPRVSPPTGHQNGLLNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSTEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1370267..1371506,1375411..1375633,1376496..1376579,1377877..1377954,1378465..1378606,1382122..1382193,1383707..1383736,1385351..1385422,1386695..1386790,1390918..1390962,1391396..1391616,1393124..1393377,1394952..1395435,1438901..1438949,1609148..1609177,1784011..1784046,1792347..1792448,1932303..1932512,2135376..2135664))
location: region:1370267-2135664:-1
so has part: feature:2135376-2135664:-1:exon
so has part: feature:1932303-1932512:-1:exon
so has part: feature:1792347-1792448:-1:exon
so has part: feature:1784011-1784046:-1:exon
so has part: feature:1609148-1609177:-1:exon
so has part: feature:1438901-1438949:-1:exon
so has part: feature:1394952-1395435:-1:exon
so has part: feature:1393124-1393377:-1:exon
so has part: feature:1391396-1391616:-1:exon
so has part: feature:1390918-1390962:-1:exon
so has part: feature:1386695-1386790:-1:exon
so has part: feature:1385351-1385422:-1:exon
so has part: feature:1383707-1383736:-1:exon
so has part: feature:1382122-1382193:-1:exon
so has part: feature:1378465-1378606:-1:exon
so has part: feature:1377877-1377954:-1:exon
so has part: feature:1376496-1376579:-1:exon
so has part: feature:1375411-1375633:-1:exon
so has part: feature:1370267-1371506:-1:exon

XP_039418652.1
type: Protein
SIO_000068: ncbiprotein

position:1370267:-1
position: 1370267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135664:-1
position: 2135664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135376-2135664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1932303-1932512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792347-1792448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1784011-1784046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1609148-1609177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438901-1438949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394952-1395435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393124-1393377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1391396-1391616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1390918-1390962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1386695-1386790:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1385351-1385422:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1383707-1383736:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382122-1382193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1378465-1378606:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1377877-1377954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1376496-1376579:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1375411-1375633:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1370267-1371506:-1:exon

LOC120411007
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120411007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2055253..2063144
location: region:2055253-2063144:1
so has part: feature:2055253-2063144:1:exon
subclass of: SO_0000011

120411007
type: Gene
SIO_000068: ncbigene

position:2055253:1
position: 2055253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063144:1
position: 2063144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2055253-2063144:1:exon

LOC120411007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120411007
product: uncharacterized LOC120411007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005603381.1
SIO_010081: LOC120411007
subclass of: SO_0000673
so part of: LOC120411007
location: join(2055253..2055622,2057847..2058478,2059386..2063144)
location: region:2055253-2063144:1
so has part: feature:2055253-2055622:1:exon
so has part: feature:2057847-2058478:1:exon
so has part: feature:2059386-2063144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2055253-2055622:1:exon

position:2055622:1
position: 2055622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057847-2058478:1:exon

position:2057847:1
position: 2057847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058478:1
position: 2058478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2059386-2063144:1:exon

position:2059386:1
position: 2059386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109146005
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2262014..2264241)
location: region:2262014-2264241:-1
so has part: feature:2262014-2264241:-1:exon
subclass of: SO_0000011

109146005
type: Gene
SIO_000068: ncbigene

position:2262014:-1
position: 2262014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2264241:-1
position: 2264241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262014-2264241:-1:exon

LOC109146005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146005
product: uncharacterized LOC109146005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002047758.2
SIO_010081: LOC109146005
subclass of: SO_0000673
so part of: LOC109146005
location: complement(join(2262014..2263215,2263304..2263513,2263610..2264241))
location: region:2262014-2264241:-1
so has part: feature:2263610-2264241:-1:exon
so has part: feature:2263304-2263513:-1:exon
so has part: feature:2262014-2263215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2263610-2264241:-1:exon

position:2263610:-1
position: 2263610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2263304-2263513:-1:exon

position:2263304:-1
position: 2263304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263513:-1
position: 2263513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2262014-2263215:-1:exon

position:2263215:-1
position: 2263215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109145998
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2580072..2583159)
location: region:2580072-2583159:-1
so has part: feature:2580072-2583159:-1:exon
subclass of: SO_0000011

109145998
type: Gene
SIO_000068: ncbigene

position:2580072:-1
position: 2580072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2583159:-1
position: 2583159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580072-2583159:-1:exon

LOC109145998
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145998
product: uncharacterized LOC109145998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002047751.3
SIO_010081: LOC109145998
subclass of: SO_0000673
so part of: LOC109145998
location: complement(join(2580072..2581089,2581596..2581697,2583054..2583159))
location: region:2580072-2583159:-1
so has part: feature:2583054-2583159:-1:exon
so has part: feature:2581596-2581697:-1:exon
so has part: feature:2580072-2581089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2583054-2583159:-1:exon

position:2583054:-1
position: 2583054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2581596-2581697:-1:exon

position:2581596:-1
position: 2581596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2581697:-1
position: 2581697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580072-2581089:-1:exon

position:2581089:-1
position: 2581089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CASTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2787275..2930296
location: region:2787275-2930296:1
so has part: feature:2787275-2930296:1:exon
subclass of: SO_0000010

104695774
type: Gene
SIO_000068: ncbigene

position:2787275:1
position: 2787275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2930296:1
position: 2930296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2787275-2930296:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_039563009.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2787275..2787481,2861159..2861229,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2930296)
location: region:2787275-2930296:1
so has part: feature:2787275-2787481:1:exon
so has part: feature:2861159-2861229:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2930296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2787275-2787481:1:exon

position:2787481:1
position: 2787481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2861159-2861229:1:exon

position:2861159:1
position: 2861159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861229:1
position: 2861229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2908467-2908660:1:exon

position:2908467:1
position: 2908467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908660:1
position: 2908660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2909520-2909652:1:exon

position:2909520:1
position: 2909520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909652:1
position: 2909652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2910958-2911081:1:exon

position:2910958:1
position: 2910958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911081:1
position: 2911081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2911669-2911779:1:exon

position:2911669:1
position: 2911669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911779:1
position: 2911779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2913148-2913230:1:exon

position:2913148:1
position: 2913148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2913230:1
position: 2913230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2914789-2914883:1:exon

position:2914789:1
position: 2914789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2914883:1
position: 2914883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2918864-2930296:1:exon

position:2918864:1
position: 2918864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2 isoform X1
translation: MELHILEHRLRVASIAKESIQLFTYGLIKLAFLSSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNVVSGGGGFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDFGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2787369..2787481,2861159..2861229,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2918929)
location: region:2787369-2918929:1
so has part: feature:2787369-2787481:1:exon
so has part: feature:2861159-2861229:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2918929:1:exon

XP_039418943.1
type: Protein
SIO_000068: ncbiprotein

position:2787369:1
position: 2787369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2918929:1
position: 2918929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2787369-2787481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2861159-2861229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2918864-2918929:1:exon

LOC109146009
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109146009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2820168..2822647)
location: region:2820168-2822647:-1
so has part: feature:2820168-2822647:-1:exon
subclass of: SO_0000011

109146009
type: Gene
SIO_000068: ncbigene

position:2820168:-1
position: 2820168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2822647:-1
position: 2822647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2820168-2822647:-1:exon

LOC109146009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109146009
product: uncharacterized LOC109146009
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002047763.2
SIO_010081: LOC109146009
subclass of: SO_0000673
so part of: LOC109146009
location: complement(join(2820168..2820560,2821433..2821545,2822609..2822647))
location: region:2820168-2822647:-1
so has part: feature:2822609-2822647:-1:exon
so has part: feature:2821433-2821545:-1:exon
so has part: feature:2820168-2820560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2822609-2822647:-1:exon

position:2822609:-1
position: 2822609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2821433-2821545:-1:exon

position:2821433:-1
position: 2821433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2821545:-1
position: 2821545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2820168-2820560:-1:exon

position:2820560:-1
position: 2820560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039563010.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2828040..2828225,2861159..2861229,2877631..2877700,2885794..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2919052)
location: region:2828040-2919052:1
so has part: feature:2828040-2828225:1:exon
so has part: feature:2861159-2861229:1:exon
so has part: feature:2877631-2877700:1:exon
so has part: feature:2885794-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2919052:1:exon

position:2828040:1
position: 2828040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919052:1
position: 2919052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828040-2828225:1:exon

position:2828225:1
position: 2828225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2861159-2861229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2877631-2877700:1:exon

position:2877631:1
position: 2877631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2877700:1
position: 2877700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2885794-2886019:1:exon

position:2885794:1
position: 2885794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886019:1
position: 2886019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2918864-2919052:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039563011.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2828040..2828225,2861159..2861229,2885797..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2919052)
location: region:2828040-2919052:1
so has part: feature:2828040-2828225:1:exon
so has part: feature:2861159-2861229:1:exon
so has part: feature:2885797-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2919052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2828040-2828225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2861159-2861229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2885797-2886019:1:exon

position:2885797:1
position: 2885797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918864-2919052:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039563012.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2880460..2880664,2881057..2881202,2885794..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2919052)
location: region:2880460-2919052:1
so has part: feature:2880460-2880664:1:exon
so has part: feature:2881057-2881202:1:exon
so has part: feature:2885794-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2919052:1:exon

position:2880460:1
position: 2880460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880460-2880664:1:exon

position:2880664:1
position: 2880664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2881057-2881202:1:exon

position:2881057:1
position: 2881057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881202:1
position: 2881202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2885794-2886019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918864-2919052:1:exon

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2 isoform X2
translation: MELNLSALCRKAMRDNPAALPGERFGISGCRKELPSSEHLSVADATWLALNVVSGGGGFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDFGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2885923..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2918929)
location: region:2885923-2918929:1
so has part: feature:2885923-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2918929:1:exon

XP_039418944.1
type: Protein
SIO_000068: ncbiprotein

position:2885923:1
position: 2885923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885923-2886019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2918864-2918929:1:exon

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2 isoform X2
translation: MELNLSALCRKAMRDNPAALPGERFGISGCRKELPSSEHLSVADATWLALNVVSGGGGFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDFGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2885923..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2918929)
location: region:2885923-2918929:1
so has part: feature:2885923-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2918929:1:exon

XP_039418945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2885923-2886019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2918864-2918929:1:exon

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2 isoform X2
translation: MELNLSALCRKAMRDNPAALPGERFGISGCRKELPSSEHLSVADATWLALNVVSGGGGFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDFGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2885923..2886019,2908467..2908660,2909520..2909652,2910958..2911081,2911669..2911779,2913148..2913230,2914789..2914883,2918864..2918929)
location: region:2885923-2918929:1
so has part: feature:2885923-2886019:1:exon
so has part: feature:2908467-2908660:1:exon
so has part: feature:2909520-2909652:1:exon
so has part: feature:2910958-2911081:1:exon
so has part: feature:2911669-2911779:1:exon
so has part: feature:2913148-2913230:1:exon
so has part: feature:2914789-2914883:1:exon
so has part: feature:2918864-2918929:1:exon

XP_039418946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2885923-2886019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2908467-2908660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2909520-2909652:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910958-2911081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2911669-2911779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2913148-2913230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2914789-2914883:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2918864-2918929:1:exon

RCC1L
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2930900..2949567)
location: region:2930900-2949567:-1
so has part: feature:2930900-2949567:-1:exon
subclass of: SO_0000010

104695775
type: Gene
SIO_000068: ncbigene

position:2930900:-1
position: 2930900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2949567:-1
position: 2949567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930900-2949567:-1:exon

RCC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RCC1L
product: RCC1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019292106.3
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2930900..2934833,2937882..2938055,2938990..2939074,2940490..2940671,2941695..2941779,2943376..2943427,2944494..2944560,2945399..2945527,2947978..2948107,2949267..2949567))
location: region:2930900-2949567:-1
so has part: feature:2949267-2949567:-1:exon
so has part: feature:2947978-2948107:-1:exon
so has part: feature:2945399-2945527:-1:exon
so has part: feature:2944494-2944560:-1:exon
so has part: feature:2943376-2943427:-1:exon
so has part: feature:2941695-2941779:-1:exon
so has part: feature:2940490-2940671:-1:exon
so has part: feature:2938990-2939074:-1:exon
so has part: feature:2937882-2938055:-1:exon
so has part: feature:2930900-2934833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2949267-2949567:-1:exon

position:2949267:-1
position: 2949267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2947978-2948107:-1:exon

position:2947978:-1
position: 2947978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2948107:-1
position: 2948107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2945399-2945527:-1:exon

position:2945399:-1
position: 2945399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945527:-1
position: 2945527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2944494-2944560:-1:exon

position:2944494:-1
position: 2944494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944560:-1
position: 2944560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2943376-2943427:-1:exon

position:2943376:-1
position: 2943376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2943427:-1
position: 2943427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2941695-2941779:-1:exon

position:2941695:-1
position: 2941695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941779:-1
position: 2941779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2940490-2940671:-1:exon

position:2940490:-1
position: 2940490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940671:-1
position: 2940671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2938990-2939074:-1:exon

position:2938990:-1
position: 2938990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939074:-1
position: 2939074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2937882-2938055:-1:exon

position:2937882:-1
position: 2937882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938055:-1
position: 2938055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2930900-2934833:-1:exon

position:2934833:-1
position: 2934833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RCC1L
product: RCC1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010409777.4
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2930900..2936499,2937882..2938055,2938990..2939074,2940490..2940671,2941695..2941779,2943376..2943427,2944494..2944560,2945399..2945527,2947978..2948107,2949267..2949567))
location: region:2930900-2949567:-1
so has part: feature:2949267-2949567:-1:exon
so has part: feature:2947978-2948107:-1:exon
so has part: feature:2945399-2945527:-1:exon
so has part: feature:2944494-2944560:-1:exon
so has part: feature:2943376-2943427:-1:exon
so has part: feature:2941695-2941779:-1:exon
so has part: feature:2940490-2940671:-1:exon
so has part: feature:2938990-2939074:-1:exon
so has part: feature:2937882-2938055:-1:exon
so has part: feature:2930900-2936499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2949267-2949567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2947978-2948107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2945399-2945527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2944494-2944560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2943376-2943427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2941695-2941779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2940490-2940671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2938990-2939074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2937882-2938055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2930900-2936499:-1:exon

position:2936499:-1
position: 2936499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1-like G exchanging factor-like protein isoform X2
translation: MAGVVRRLLCRGLGVAAGPPRTRQLREAEEAAPVFQYAGKAARRKDRVFVWGFSYSGALGVPSFVRPDAGWKKPRRIQPTPYRLETEEKITSAACGYGFTLLASNTRDITKVWGMGLNKDSQLGFQRSRRDQTKGYEYVLEPSPIPLPLEKPQQTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSGSHLIHQLKEFDSRVVQVVCGQDHSLFRTKKGTIYACGWGADGQTGLGHYNITSVPTKLHGDIAGVNIIQVSSYGDCCLAVSDEGDVFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNVVLTEEGNVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSPDIRVAHVRCGLSQFAALTSDCTQ
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2934817..2934833,2937882..2938055,2938990..2939074,2940490..2940671,2941695..2941779,2943376..2943427,2944494..2944560,2945399..2945527,2947978..2948107,2949267..2949533))
location: region:2934817-2949533:-1
so has part: feature:2949267-2949533:-1:exon
so has part: feature:2947978-2948107:-1:exon
so has part: feature:2945399-2945527:-1:exon
so has part: feature:2944494-2944560:-1:exon
so has part: feature:2943376-2943427:-1:exon
so has part: feature:2941695-2941779:-1:exon
so has part: feature:2940490-2940671:-1:exon
so has part: feature:2938990-2939074:-1:exon
so has part: feature:2937882-2938055:-1:exon
so has part: feature:2934817-2934833:-1:exon

XP_019147651.2
type: Protein
SIO_000068: ncbiprotein

position:2934817:-1
position: 2934817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2949533:-1
position: 2949533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949267-2949533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2947978-2948107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2945399-2945527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2944494-2944560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2943376-2943427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2941695-2941779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2940490-2940671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2938990-2939074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2937882-2938055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2934817-2934833:-1:exon

RCC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1-like G exchanging factor-like protein isoform X1
translation: MAGVVRRLLCRGLGVAAGPPRTRQLREAEEAAPVFQYAGKAARRKDRVFVWGFSYSGALGVPSFVRPDAGWKKPRRIQPTPYRLETEEKITSAACGYGFTLLASNTRDITKVWGMGLNKDSQLGFQRSRRDQTKGYEYVLEPSPIPLPLEKPQQTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSGSHLIHQLKEFDSRVVQVVCGQDHSLFRTKKGTIYACGWGADGQTGLGHYNITSVPTKLHGDIAGVNIIQVSSYGDCCLAVSDEGDVFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNVVLTEEGNVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSPDIRVAHVRCGLSQFAALTNRGELFVWGKNLRGCLGTGRMEDQYFPWRVRMVVLRPRVHSLASFCYPKEKDYHLLCVFLLQFAVLSNSERSESLK
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2936270..2936499,2937882..2938055,2938990..2939074,2940490..2940671,2941695..2941779,2943376..2943427,2944494..2944560,2945399..2945527,2947978..2948107,2949267..2949533))
location: region:2936270-2949533:-1
so has part: feature:2949267-2949533:-1:exon
so has part: feature:2947978-2948107:-1:exon
so has part: feature:2945399-2945527:-1:exon
so has part: feature:2944494-2944560:-1:exon
so has part: feature:2943376-2943427:-1:exon
so has part: feature:2941695-2941779:-1:exon
so has part: feature:2940490-2940671:-1:exon
so has part: feature:2938990-2939074:-1:exon
so has part: feature:2937882-2938055:-1:exon
so has part: feature:2936270-2936499:-1:exon

XP_010408079.2
type: Protein
SIO_000068: ncbiprotein

position:2936270:-1
position: 2936270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949267-2949533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2947978-2948107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2945399-2945527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2944494-2944560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2943376-2943427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2941695-2941779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2940490-2940671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2938990-2939074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2937882-2938055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2936270-2936499:-1:exon

NCF1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2950642..2958960)
location: region:2950642-2958960:-1
so has part: feature:2950642-2958960:-1:exon
subclass of: SO_0000010

104695773
type: Gene
SIO_000068: ncbigene

position:2950642:-1
position: 2950642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958960:-1
position: 2958960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2950642-2958960:-1:exon

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NCF1
product: neutrophil cytosolic factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019292087.3
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2950642..2951041,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958246..2958326,2958772..2958960))
location: region:2950642-2958960:-1
so has part: feature:2958772-2958960:-1:exon
so has part: feature:2958246-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2950642-2951041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958960:-1:exon

position:2958772:-1
position: 2958772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2958246-2958326:-1:exon

position:2958246:-1
position: 2958246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958326:-1
position: 2958326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

position:2957844:-1
position: 2957844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957919:-1
position: 2957919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

position:2956457:-1
position: 2956457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956622:-1
position: 2956622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

position:2956263:-1
position: 2956263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956318:-1
position: 2956318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

position:2955837:-1
position: 2955837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955959:-1
position: 2955959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

position:2955344:-1
position: 2955344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955451:-1
position: 2955451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

position:2954393:-1
position: 2954393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954510:-1
position: 2954510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

position:2953669:-1
position: 2953669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2953776:-1
position: 2953776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

position:2951997:-1
position: 2951997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952139:-1
position: 2952139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2950642-2951041:-1:exon

position:2951041:-1
position: 2951041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NCF1
product: neutrophil cytosolic factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019292086.3
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2950642..2951105,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958285..2958326,2958772..2958959))
location: region:2950642-2958959:-1
so has part: feature:2958772-2958959:-1:exon
so has part: feature:2958285-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2950642-2951105:-1:exon

position:2958959:-1
position: 2958959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2958285-2958326:-1:exon

position:2958285:-1
position: 2958285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2950642-2951105:-1:exon

position:2951105:-1
position: 2951105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NCF1
product: neutrophil cytosolic factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010409771.4
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2950642..2951105,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958246..2958326,2958772..2958957))
location: region:2950642-2958957:-1
so has part: feature:2958772-2958957:-1:exon
so has part: feature:2958246-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2950642-2951105:-1:exon

position:2958957:-1
position: 2958957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2958246-2958326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2950642-2951105:-1:exon

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X2
translation: MGDTFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLSEKKALKEMFPIESGDINIENRIIPHLPAPKWFDGQRSTENRQGTLAEYCYTLINLPHKISRCLHVVSFFKVRHDDMNPVTDSQIKKPEVFLLPKDSKKNPTDITGPIVLQTYRAIADYEKSSTSEMSLKAGDMVDVVEKSENGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEAYMVWKSYTAVEEDELTLKEGDTIEVIHKLLDGWWVIRKDETTGYYPAMYLQKAGEVNTSVKSEQRNRSAPPRRSTIRNVKSIHKQGRKQISQETYRRNSKKYIQNQRNLRGNSQNKANVIVEKNEPEGNKPKAQPAVPPRPSKDLILNRCTESTRKKIL
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2950987..2951105,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958285..2958326,2958772..2958843))
location: region:2950987-2958843:-1
so has part: feature:2958772-2958843:-1:exon
so has part: feature:2958285-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2950987-2951105:-1:exon

XP_019147631.1
type: Protein
SIO_000068: ncbiprotein

position:2950987:-1
position: 2950987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958843:-1
position: 2958843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2958285-2958326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2950987-2951105:-1:exon

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X1
translation: MGDTFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLSEKVVYRRFTEIYEFHKALKEMFPIESGDINIENRIIPHLPAPKWFDGQRSTENRQGTLAEYCYTLINLPHKISRCLHVVSFFKVRHDDMNPVTDSQIKKPEVFLLPKDSKKNPTDITGPIVLQTYRAIADYEKSSTSEMSLKAGDMVDVVEKSENGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEAYMVWKSYTAVEEDELTLKEGDTIEVIHKLLDGWWVIRKDETTGYYPAMYLQKAGEVNTSVKSEQRNRSAPPRRSTIRNVKSIHKQGRKQISQETYRRNSKKYIQNQRNLRGNSQNKANVIVEKNEPEGNKPKAQPAVPPRPSKDLILNRCTESTRKKIL
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2950987..2951105,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958246..2958326,2958772..2958843))
location: region:2950987-2958843:-1
so has part: feature:2958772-2958843:-1:exon
so has part: feature:2958246-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2950987-2951105:-1:exon

XP_010408073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2958246-2958326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2950987-2951105:-1:exon

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X3
translation: MGDTFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLSEKVVYRRFTEIYEFHKALKEMFPIESGDINIENRIIPHLPAPKWFDGQRSTENRQGTLAEYCYTLINLPHKISRCLHVVSFFKVRHDDMNPVTDSQIKKPEVFLLPKDSKKNPTDITGPIVLQTYRAIADYEKSSTSEMSLKAGDMVDVVEKSENGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEAYMVWKSYTAVEEDELTLKEGDTIEVIHKLLDGWWVIRKDETTGYYPAMYLQKAGEVNTSVKSEQRNRSAPPRRSTIRNVKSIHKQGRKQISQETYRRNSKKYIQNQRNLRGNSQNKANVIAKTLS
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2951025..2951041,2951997..2952139,2953669..2953776,2954393..2954510,2955344..2955451,2955837..2955959,2956263..2956318,2956457..2956622,2957844..2957919,2958246..2958326,2958772..2958843))
location: region:2951025-2958843:-1
so has part: feature:2958772-2958843:-1:exon
so has part: feature:2958246-2958326:-1:exon
so has part: feature:2957844-2957919:-1:exon
so has part: feature:2956457-2956622:-1:exon
so has part: feature:2956263-2956318:-1:exon
so has part: feature:2955837-2955959:-1:exon
so has part: feature:2955344-2955451:-1:exon
so has part: feature:2954393-2954510:-1:exon
so has part: feature:2953669-2953776:-1:exon
so has part: feature:2951997-2952139:-1:exon
so has part: feature:2951025-2951041:-1:exon

XP_019147632.1
type: Protein
SIO_000068: ncbiprotein

position:2951025:-1
position: 2951025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958772-2958843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2958246-2958326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957844-2957919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956457-2956622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956263-2956318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955837-2955959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955344-2955451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2954393-2954510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953669-2953776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2951997-2952139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2951025-2951041:-1:exon

GTF2I
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2964681..3066157)
location: region:2964681-3066157:-1
so has part: feature:2964681-3066157:-1:exon
subclass of: SO_0000010

104695772
type: Gene
SIO_000068: ncbigene

position:2964681:-1
position: 2964681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066157:-1
position: 3066157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964681-3066157:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039562704.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2964681..2965191,2966683..2966757,2969061..2969099,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051892,3065969..3066155))
location: region:2964681-3066155:-1
so has part: feature:3065969-3066155:-1:exon
so has part: feature:3051802-3051892:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:3000296-3000358:-1:exon
so has part: feature:2998505-2998612:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2969061-2969099:-1:exon
so has part: feature:2966683-2966757:-1:exon
so has part: feature:2964681-2965191:-1:exon

position:3066155:-1
position: 3066155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065969-3066155:-1:exon

position:3065969:-1
position: 3065969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3051802-3051892:-1:exon

position:3051802:-1
position: 3051802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051892:-1
position: 3051892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3046358-3046463:-1:exon

position:3046358:-1
position: 3046358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046463:-1
position: 3046463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3045208-3045346:-1:exon

position:3045208:-1
position: 3045208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045346:-1
position: 3045346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3032565-3032699:-1:exon

position:3032565:-1
position: 3032565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032699:-1
position: 3032699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3032018-3032201:-1:exon

position:3032018:-1
position: 3032018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032201:-1
position: 3032201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3031808-3031836:-1:exon

position:3031808:-1
position: 3031808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031836:-1
position: 3031836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3030740-3030788:-1:exon

position:3030740:-1
position: 3030740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3030788:-1
position: 3030788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3029988-3030031:-1:exon

position:3029988:-1
position: 3029988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3030031:-1
position: 3030031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3028672-3028749:-1:exon

position:3028672:-1
position: 3028672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028749:-1
position: 3028749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3022098-3022157:-1:exon

position:3022098:-1
position: 3022098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022157:-1
position: 3022157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3020557-3020619:-1:exon

position:3020557:-1
position: 3020557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3020619:-1
position: 3020619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3018788-3018892:-1:exon

position:3018788:-1
position: 3018788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018892:-1
position: 3018892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3000296-3000358:-1:exon

position:3000296:-1
position: 3000296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000358:-1
position: 3000358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2998505-2998612:-1:exon

position:2998505:-1
position: 2998505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998612:-1
position: 2998612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2995047-2995112:-1:exon

position:2995047:-1
position: 2995047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2995112:-1
position: 2995112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2990528-2990711:-1:exon

position:2990528:-1
position: 2990528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2990711:-1
position: 2990711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2989051-2989103:-1:exon

position:2989051:-1
position: 2989051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989103:-1
position: 2989103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2986495-2986578:-1:exon

position:2986495:-1
position: 2986495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2986578:-1
position: 2986578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2985602-2985785:-1:exon

position:2985602:-1
position: 2985602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985785:-1
position: 2985785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2985230-2985288:-1:exon

position:2985230:-1
position: 2985230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985288:-1
position: 2985288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2981585-2981656:-1:exon

position:2981585:-1
position: 2981585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981656:-1
position: 2981656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2980884-2981067:-1:exon

position:2980884:-1
position: 2980884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981067:-1
position: 2981067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2980311-2980369:-1:exon

position:2980311:-1
position: 2980311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980369:-1
position: 2980369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2979582-2979665:-1:exon

position:2979582:-1
position: 2979582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2979665:-1
position: 2979665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2979009-2979104:-1:exon

position:2979009:-1
position: 2979009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2979104:-1
position: 2979104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2977386-2977451:-1:exon

position:2977386:-1
position: 2977386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977451:-1
position: 2977451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2976353-2976536:-1:exon

position:2976353:-1
position: 2976353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2976536:-1
position: 2976536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2975431-2975483:-1:exon

position:2975431:-1
position: 2975431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975483:-1
position: 2975483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2974765-2974875:-1:exon

position:2974765:-1
position: 2974765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974875:-1
position: 2974875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2973810-2973893:-1:exon

position:2973810:-1
position: 2973810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2973893:-1
position: 2973893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2972810-2972993:-1:exon

position:2972810:-1
position: 2972810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2972993:-1
position: 2972993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2971832-2971860:-1:exon

position:2971832:-1
position: 2971832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971860:-1
position: 2971860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2969061-2969099:-1:exon

position:2969061:-1
position: 2969061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969099:-1
position: 2969099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2966683-2966757:-1:exon

position:2966683:-1
position: 2966683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966757:-1
position: 2966757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2964681-2965191:-1:exon

position:2965191:-1
position: 2965191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039562700.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2964681..2965191,2966683..2966757,2969061..2969099,2970397..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051892,3065969..3066155))
location: region:2964681-3066155:-1
so has part: feature:3065969-3066155:-1:exon
so has part: feature:3051802-3051892:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:3000296-3000358:-1:exon
so has part: feature:2998505-2998612:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2970397-2970462:-1:exon
so has part: feature:2969061-2969099:-1:exon
so has part: feature:2966683-2966757:-1:exon
so has part: feature:2964681-2965191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3065969-3066155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3051802-3051892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3046358-3046463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3045208-3045346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3032565-3032699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3032018-3032201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3031808-3031836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3030740-3030788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029988-3030031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3028672-3028749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3022098-3022157:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3020557-3020619:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3018788-3018892:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3000296-3000358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2998505-2998612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2995047-2995112:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2990528-2990711:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2989051-2989103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2986495-2986578:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2985602-2985785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2985230-2985288:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2981585-2981656:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2980884-2981067:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2980311-2980369:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2979582-2979665:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2979009-2979104:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2977386-2977451:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2976353-2976536:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2975431-2975483:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2974765-2974875:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2973810-2973893:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2972810-2972993:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2971832-2971860:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2970397-2970462:-1:exon

position:2970397:-1
position: 2970397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970462:-1
position: 2970462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2969061-2969099:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2966683-2966757:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2964681-2965191:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X5
translation: MIHVPDPLTILQQKRKMAQTTAPATSIHDEESLESRMVVTFLISGLESVCKELAKSKAEIACIGVYERTVFVVGTERGKAFVNSREDIKKDFNEYCVPEEDRAAELQKTKTTPPVNRQTVDTVELEALRKSVEDFFCFCYGKALGKSTVVPVPYEEIQRDHSAVIVQGLPEGLALKHPSNYDISTLKWILDNKSEISFSINRSFLEPKKHIGADMTDPSHSIIPACGSCPPVKVKVEPSKDSGISSKMSTLTMKQETDDPNYYQFNTSAGPSRTSEIDEKIAPGKSYTDSSQHDSSETSEDSEVEVTVEDDDDDYLPPDKRLKNTKLATEAANSGRKNGKEFNFDSSQRDSSETSEDSEAELTSEDDDDDDFNPSEKRLKNTKLANEAGNTGRRKGKEFNFDKWNTRITDLRKEVEELFEKKYAQAIKAEGPVSVPYPLFQSHAEDLYVEGLPEGIPFRRPSTYGIPRLERILLGKEKIRFVIKKHELLNLTSVPVDKTVSGVSNTVKEEWYARVTKLRKMVDQLFCKKFAEALGSTEPKAVPYKKFEAHPTDLYVEGLPENIPFRSPSWYGIPCLEQIIQVGNRIKFVIKRPELLTVTSTEFTQPGSNTPAKEDWNAKITKLRKEVEDIFNIKFAQALGLSETVKVPYSVFESNPESLIVEGLPEGVPFRSPTWFGIPRLERIVRGSGKIKFVIKKPELIASYLPLRLANKIKTKAISPRSSKRSRSSADNSSVPEIEVTVDDSPNKAQTTDAQTNSQTNGSNTNSKPQGREFSFEAWNAKITDLKQKVENLFNEKCGEALGHSEPVKVPYALFESFPEVFYVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIRFVIKKPEMFEAAVKESSARSPQRKNNSSSKANTTRTTKNTVENTSAGVEDLNIIQVTIPDDESERLPKVEKARQLREQVNDLFSQKFGEATGMNFPVKVPYRKITNNPGCVLVDGMPPGVAFKAPSYLEISSMRKILESAKFIKFTIIRPFPGLVINNQPAEPSQIEVSLEDNTETEENSQIKQDPDLTS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2966699..2966757,2969061..2969099,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051842))
location: region:2966699-3051842:-1
so has part: feature:3051802-3051842:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:3000296-3000358:-1:exon
so has part: feature:2998505-2998612:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2969061-2969099:-1:exon
so has part: feature:2966699-2966757:-1:exon

XP_039418638.1
type: Protein
SIO_000068: ncbiprotein

position:2966699:-1
position: 2966699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051842:-1
position: 3051842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3051802-3051842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3046358-3046463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3045208-3045346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3032565-3032699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3032018-3032201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3031808-3031836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3030740-3030788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3029988-3030031:-1:exon

urn:…
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SIO_000628: feature:3028672-3028749:-1:exon

urn:…
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SIO_000628: feature:3022098-3022157:-1:exon

urn:…
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SIO_000628: feature:3020557-3020619:-1:exon

urn:…
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SIO_000628: feature:3018788-3018892:-1:exon

urn:…
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SIO_000628: feature:3000296-3000358:-1:exon

urn:…
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SIO_000628: feature:2998505-2998612:-1:exon

urn:…
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SIO_000628: feature:2995047-2995112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2990528-2990711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2989051-2989103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2986495-2986578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2985602-2985785:-1:exon

urn:…
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SIO_000628: feature:2985230-2985288:-1:exon

urn:…
SIO_000300: 21
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urn:…
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:2979582-2979665:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2979009-2979104:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2977386-2977451:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2976353-2976536:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2975431-2975483:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2974765-2974875:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2973810-2973893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2972810-2972993:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2971832-2971860:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2969061-2969099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2966699-2966757:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X2
translation: MIHVPDPLTILQQKRKMAQTTAPATSIHDEESLESRMVVTFLISGLESVCKELAKSKAEIACIGVYERTVFVVGTERGKAFVNSREDIKKDFNEYCVPEEDRAAELQKTKTTPPVNRQTVDTVELEALRKSVEDFFCFCYGKALGKSTVVPVPYEEIQRDHSAVIVQGLPEGLALKHPSNYDISTLKWILDNKSEISFSINRSFLEPKKHIGADMTDPSHSIIPACGSCPPVKVKVEPSKDSGISSKMSTLTMKQETDDPNYYQFNTSAGPSRTSEIDEKIAPGKSYTDSSQHDSSETSEDSEVEVTVEDDDDDYLPPDKRLKNTKLATEAANSGRKNGKEFNFDSSQRDSSETSEDSEAELTSEDDDDDDFNPSEKRLKNTKLANEAGNTGRRKGKEFNFDKWNTRITDLRKEVEELFEKKYAQAIKAEGPVSVPYPLFQSHAEDLYVEGLPEGIPFRRPSTYGIPRLERILLGKEKIRFVIKKHELLNLTSVPVDKTVSGVSNTVKEEWYARVTKLRKMVDQLFCKKFAEALGSTEPKAVPYKKFEAHPTDLYVEGLPENIPFRSPSWYGIPCLEQIIQVGNRIKFVIKRPELLTVTSTEFTQPGSNTPAKEDWNAKITKLRKEVEDIFNIKFAQALGLSETVKVPYSVFESNPESLIVEGLPEGVPFRSPTWFGIPRLERIVRGSGKIKFVIKKPELIASYLPLRLANKIKTKAISPRSSKRSRSSADNSSVPEIEVTVDDSPNKAQTTDAQTNSQTNGSNTNSKPQGREFSFEAWNAKITDLKQKVENLFNEKCGEALGHSEPVKVPYALFESFPEVFYVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIRFVIKKPEMFEAAVKESSARSPQRKNNSSSKANTTRTTKNTVENTSAGVEDLNIIQVTIPDDESERLPKVEKARQLREQVNDLFSQKFGEATGMNFPVKVPYRKITNNPGCVLVDGMPPGVAFKAPSYLEISSMRKILESAKFIKFTIIRPFPGLVINNHLIEEAEADAPPTAPAAAAVLPEPAEPSQIEVSLEDNTETEENSQIKQDPDLTS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2966699..2966757,2969061..2969099,2970397..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051842))
location: region:2966699-3051842:-1
so has part: feature:3051802-3051842:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
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so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:3000296-3000358:-1:exon
so has part: feature:2998505-2998612:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
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so has part: feature:2971832-2971860:-1:exon
so has part: feature:2970397-2970462:-1:exon
so has part: feature:2969061-2969099:-1:exon
so has part: feature:2966699-2966757:-1:exon

XP_039418634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3051802-3051842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3046358-3046463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3045208-3045346:-1:exon

urn:…
SIO_000300: 4
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urn:…
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urn:…
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SIO_000628: feature:3031808-3031836:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:3022098-3022157:-1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:3018788-3018892:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3000296-3000358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2998505-2998612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2995047-2995112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2990528-2990711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2989051-2989103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2986495-2986578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2985602-2985785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2985230-2985288:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2981585-2981656:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2980884-2981067:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2980311-2980369:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2979582-2979665:-1:exon

urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:2976353-2976536:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2975431-2975483:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2974765-2974875:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2973810-2973893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2972810-2972993:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2971832-2971860:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2970397-2970462:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2969061-2969099:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2966699-2966757:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039562705.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2969062..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051892,3065969..3066156))
location: region:2969062-3066156:-1
so has part: feature:3065969-3066156:-1:exon
so has part: feature:3051802-3051892:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2969062-2970462:-1:exon

position:2969062:-1
position: 2969062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066156:-1
position: 3066156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065969-3066156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3051802-3051892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3046358-3046463:-1:exon

urn:…
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SIO_000628: feature:3045208-3045346:-1:exon

urn:…
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SIO_000628: feature:3032565-3032699:-1:exon

urn:…
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SIO_000628: feature:3032018-3032201:-1:exon

urn:…
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SIO_000628: feature:3031808-3031836:-1:exon

urn:…
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SIO_000628: feature:3030740-3030788:-1:exon

urn:…
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SIO_000628: feature:3029988-3030031:-1:exon

urn:…
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SIO_000628: feature:3028672-3028749:-1:exon

urn:…
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urn:…
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SIO_000628: feature:3020557-3020619:-1:exon

urn:…
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SIO_000628: feature:3018788-3018892:-1:exon

urn:…
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SIO_000628: feature:2995047-2995112:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:2985230-2985288:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 32
SIO_000628: feature:2969062-2970462:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039562702.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2969062..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3065969..3066155))
location: region:2969062-3066155:-1
so has part: feature:3065969-3066155:-1:exon
so has part: feature:3046358-3046463:-1:exon
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so has part: feature:3032565-3032699:-1:exon
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so has part: feature:3018788-3018892:-1:exon
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so has part: feature:2979009-2979104:-1:exon
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so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2969062-2970462:-1:exon

urn:…
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SIO_000628: feature:3065969-3066155:-1:exon

urn:…
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urn:…
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GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039562701.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2969062..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022154,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051892,3065969..3066155))
location: region:2969062-3066155:-1
so has part: feature:3065969-3066155:-1:exon
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position:3022154:-1
position: 3022154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039562699.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2969062..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051892,3065969..3066155))
location: region:2969062-3066155:-1
so has part: feature:3065969-3066155:-1:exon
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urn:…
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GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GTF2I
product: general transcription factor IIi, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039562703.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2969062..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3046616..3046763))
location: region:2969062-3046763:-1
so has part: feature:3046616-3046763:-1:exon
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position:3046763:-1
position: 3046763
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type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:3046616-3046763:-1:exon

position:3046616:-1
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GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X3
translation: MIHVPDPLTILQQKRKMAQTTAPATSIHDEESLESRMVVTFLISGLESVCKELAKSKAEIACIGVYERTVFVVGTERGKAFVNSREDIKKDFNEYCVPEEDRAAELQKTKTTPPVNRQTVDTVELEALRKSVEDFFCFCYGKALGKSTVVPVPYEEIQRDHSAVIVQGLPEGLALKHPSNYDISTLKWILDNKSEISFSINRSFLEPKKHIGADMTDPSHSIIPACGSCPPVKVKVEPSKDSGISSKMSTLTMKQETDDPNYYQFNTSGPSRTSEIDEKIAPGKSYTDSSQHDSSETSEDSEVEVTVEDDDDDYLPPDKRLKNTKLATEAANSGRKNGKEFNFDSSQRDSSETSEDSEAELTSEDDDDDDFNPSEKRLKNTKLANEAGNTGRRKGKEFNFDKWNTRITDLRKEVEELFEKKYAQAIKAEGPVSVPYPLFQSHAEDLYVEGLPEGIPFRRPSTYGIPRLERILLGKEKIRFVIKKHELLNLTSVPVDKTVSGVSNTVKEEWYARVTKLRKMVDQLFCKKFAEALGSTEPKAVPYKKFEAHPTDLYVEGLPENIPFRSPSWYGIPCLEQIIQVGNRIKFVIKRPELLTVTSTEFTQPGSNTPAKEDWNAKITKLRKEVEDIFNIKFAQALGLSETVKVPYSVFESNPESLIVEGLPEGVPFRSPTWFGIPRLERIVRGSGKIKFVIKKPELIASYLPLRLANKIKTKAISPRSSKRSRSSADNSSVPEIEVTVDDSPNKAQTTDAQTNSQTNGSNTNSKPQGREFSFEAWNAKITDLKQKVENLFNEKCGEALGHSEPVKVPYALFESFPEVFYVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIRFVIKKPEMFEAAVKESSARSPQRKNNSSSKANTTRTTKNTVENTSAGVEDLNIIQVTIPDDESERLPKVEKARQLREQVNDLFSQKFGEATGMNFPVKVPYRKITNNPGCVLVDGMPPGVAFKAPSYLEISSMRKILESAKFIKFTIIRPFPGLVINNHLIEEAEADAPPTAPAAAAVLPGDAECNTCSFRRGGVCILLADVIRSHVLGISCS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2970296..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,2998505..2998612,3000296..3000358,3018788..3018892,3020557..3020619,3022098..3022154,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051842))
location: region:2970296-3051842:-1
so has part: feature:3051802-3051842:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022154:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:3000296-3000358:-1:exon
so has part: feature:2998505-2998612:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2970296-2970462:-1:exon

XP_039418635.1
type: Protein
SIO_000068: ncbiprotein

position:2970296:-1
position: 2970296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3051802-3051842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3046358-3046463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3045208-3045346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3032565-3032699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3032018-3032201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3031808-3031836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3030740-3030788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3029988-3030031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3028672-3028749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3022098-3022154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020557-3020619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3018788-3018892:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3000296-3000358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2998505-2998612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2995047-2995112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2990528-2990711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2989051-2989103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2986495-2986578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2985602-2985785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2985230-2985288:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2981585-2981656:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2980884-2981067:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2980311-2980369:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2979582-2979665:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2979009-2979104:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2977386-2977451:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2976353-2976536:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2975431-2975483:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2974765-2974875:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2973810-2973893:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2972810-2972993:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2971832-2971860:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2970296-2970462:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X6
translation: MIHVPDPLTILQQKRKMAQTTAPATSIHDEESLESRMVVTFLISGLESVCKELAKSKAEIACIGVYERTVFVVGTERGKAFVNSREDIKKDFNEYCVPEEDRAAELQKTKTTPPVNRQTVDTVELEALRKSVEDFFCFCYGKALGKSTVVPVPYEEIQRDHSAVIVQGLPEGLALKHPSNYDISTLKWILDNKSEISFSINRSFLEPKKHIGADMTDPSHSIIPACGSCPPVKVKVEPSKDSGISSKMSTLTMKQETDDPNYYQFNTSAGPSRTSEIDEKIAPGKSYTDSSQHDSSETSEDSEVEVTVEDDDDDYLPPDKRLKNTKLATEAANSGRKNGKEFNFDKWNTRITDLRKEVEELFEKKYAQAIKAEGPVSVPYPLFQSHAEDLYVEGLPEGIPFRRPSTYGIPRLERILLGKEKIRFVIKKHELLNLTSVPVDKTVSGVSNTVKEEWYARVTKLRKMVDQLFCKKFAEALGSTEPKAVPYKKFEAHPTDLYVEGLPENIPFRSPSWYGIPCLEQIIQVGNRIKFVIKRPELLTVTSTEFTQPGSNTPAKEDWNAKITKLRKEVEDIFNIKFAQALGLSETVKVPYSVFESNPESLIVEGLPEGVPFRSPTWFGIPRLERIVRGSGKIKFVIKKPELIASYLPLRLANKIKTKAISPRSSKRSRSSADNSSVPEIEVTVDDSPNKAQTTDAQTNSQTNGSNTNSKPQGREFSFEAWNAKITDLKQKVENLFNEKCGEALGHSEPVKVPYALFESFPEVFYVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIRFVIKKPEMFEAAVKESSARSPQRKNNSSSKANTTRTTKNTVENTSAGVEDLNIIQVTIPDDESERLPKVEKARQLREQVNDLFSQKFGEATGMNFPVKVPYRKITNNPGCVLVDGMPPGVAFKAPSYLEISSMRKILESAKFIKFTIIRPFPGLVINNHLIEEAEADAPPTAPAAAAVLPGDAECNTCSFRRGGVCILLADVIRSHVLGISCS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2970296..2970462,2971832..2971860,2972810..2972993,2973810..2973893,2974765..2974875,2975431..2975483,2976353..2976536,2977386..2977451,2979009..2979104,2979582..2979665,2980311..2980369,2980884..2981067,2981585..2981656,2985230..2985288,2985602..2985785,2986495..2986578,2989051..2989103,2990528..2990711,2995047..2995112,3018788..3018892,3020557..3020619,3022098..3022157,3028672..3028749,3029988..3030031,3030740..3030788,3031808..3031836,3032018..3032201,3032565..3032699,3045208..3045346,3046358..3046463,3051802..3051842))
location: region:2970296-3051842:-1
so has part: feature:3051802-3051842:-1:exon
so has part: feature:3046358-3046463:-1:exon
so has part: feature:3045208-3045346:-1:exon
so has part: feature:3032565-3032699:-1:exon
so has part: feature:3032018-3032201:-1:exon
so has part: feature:3031808-3031836:-1:exon
so has part: feature:3030740-3030788:-1:exon
so has part: feature:3029988-3030031:-1:exon
so has part: feature:3028672-3028749:-1:exon
so has part: feature:3022098-3022157:-1:exon
so has part: feature:3020557-3020619:-1:exon
so has part: feature:3018788-3018892:-1:exon
so has part: feature:2995047-2995112:-1:exon
so has part: feature:2990528-2990711:-1:exon
so has part: feature:2989051-2989103:-1:exon
so has part: feature:2986495-2986578:-1:exon
so has part: feature:2985602-2985785:-1:exon
so has part: feature:2985230-2985288:-1:exon
so has part: feature:2981585-2981656:-1:exon
so has part: feature:2980884-2981067:-1:exon
so has part: feature:2980311-2980369:-1:exon
so has part: feature:2979582-2979665:-1:exon
so has part: feature:2979009-2979104:-1:exon
so has part: feature:2977386-2977451:-1:exon
so has part: feature:2976353-2976536:-1:exon
so has part: feature:2975431-2975483:-1:exon
so has part: feature:2974765-2974875:-1:exon
so has part: feature:2973810-2973893:-1:exon
so has part: feature:2972810-2972993:-1:exon
so has part: feature:2971832-2971860:-1:exon
so has part: feature:2970296-2970462:-1:exon

XP_039418639.1
type: Protein
SIO_000068: ncbiprotein