Corvus cornix cornix isolate S_Up_H32 chromosome 13, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 13, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_046343.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_046343.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022196.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19315571
topology: linear
so has quality: SO_0000987
location: 1..19315571
location: region:1-19315571:1
RO_0002162: 932674

NC_046343
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19315571:1
position: 19315571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19315571:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 13
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

LOC104689454
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272285..281288
location: region:272285-281288:1
so has part: feature:272285-281288:1:exon
subclass of: SO_0000011

104689454
type: Gene
SIO_000068: ncbigene

position:272285:1
position: 272285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281288:1
position: 281288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272285-281288:1:exon

LOC104689454
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689454
product: uncharacterized LOC104689454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_002045500.3
SIO_010081: LOC104689454
subclass of: SO_0000673
so part of: LOC104689454
location: join(272285..273063,279358..281288)
location: region:272285-281288:1
so has part: feature:272285-273063:1:exon
so has part: feature:279358-281288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272285-273063:1:exon

position:273063:1
position: 273063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279358-281288:1:exon

position:279358:1
position: 279358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104689455
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(283547..293485)
location: region:283547-293485:-1
so has part: feature:283547-293485:-1:exon
subclass of: SO_0000011

104689455
type: Gene
SIO_000068: ncbigene

position:283547:-1
position: 283547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293485:-1
position: 293485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283547-293485:-1:exon

LOC104689455
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689455
product: uncharacterized LOC104689455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XR_751811.3
SIO_010081: LOC104689455
subclass of: SO_0000673
so part of: LOC104689455
location: complement(join(283547..284306,284433..284558,287506..287704,291550..291725,292761..292874,293201..293485))
location: region:283547-293485:-1
so has part: feature:293201-293485:-1:exon
so has part: feature:292761-292874:-1:exon
so has part: feature:291550-291725:-1:exon
so has part: feature:287506-287704:-1:exon
so has part: feature:284433-284558:-1:exon
so has part: feature:283547-284306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293201-293485:-1:exon

position:293201:-1
position: 293201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292761-292874:-1:exon

position:292761:-1
position: 292761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292874:-1
position: 292874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291550-291725:-1:exon

position:291550:-1
position: 291550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291725:-1
position: 291725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287506-287704:-1:exon

position:287506:-1
position: 287506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287704:-1
position: 287704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284433-284558:-1:exon

position:284433:-1
position: 284433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284558:-1
position: 284558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283547-284306:-1:exon

position:284306:-1
position: 284306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGR1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: EGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296959..300036)
location: region:296959-300036:-1
so has part: feature:296959-300036:-1:exon
subclass of: SO_0000010

104689456
type: Gene
SIO_000068: ncbigene

position:296959:-1
position: 296959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300036:-1
position: 300036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296959-300036:-1:exon

EGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: EGR1
product: early growth response 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 33 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559334.1
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(296959..299301,299606..300036))
location: region:296959-300036:-1
so has part: feature:299606-300036:-1:exon
so has part: feature:296959-299301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299606-300036:-1:exon

position:299606:-1
position: 299606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296959-299301:-1:exon

position:299301:-1
position: 299301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: EGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early growth response protein 1
translation: MAAAKAEMQLLPPLQISDPFGTFPHSPPAMDTHYPKLEEMMLLSGGGPQFLAPPGAPESAGFGAAGEPGEQHFEHLAADTFPEISLNSEKTLPETNYPNQTTRLPPITYTGRFSLEPAPNSSNPLWPEPLFSLVSGLVGMANAPPTSTPTSSSPSSSSSSQSSPLSCSVQASENNPIYSAAPTFPSSSSDIFPESQTQSFPNPSGAPIQYPPPAYPTAKTNFQVPMIPDYLFPQQQGELSLVPADQKPFPALETRAQQPSLTPLSTIKAFATQTGSQELKTLNTNYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKAEKAAPVSTASSIPAYSSSVTTSYPSSIATTYPSPVRTAYSSPAPSSYPSPAHTTFPSPSIATTYPSGTATFQTQVATSFSSPGVANNFSSQVTSALSDMNAAFSPRTIEIC
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(297998..299301,299606..299840))
location: region:297998-299840:-1
so has part: feature:299606-299840:-1:exon
so has part: feature:297998-299301:-1:exon

XP_039415268.1
type: Protein
SIO_000068: ncbiprotein

position:297998:-1
position: 297998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299840:-1
position: 299840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299606-299840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297998-299301:-1:exon

LOC120410713
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300124..319896
location: region:300124-319896:1
so has part: feature:300124-319896:1:exon
subclass of: SO_0000011

120410713
type: Gene
SIO_000068: ncbigene

position:300124:1
position: 300124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319896:1
position: 319896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300124-319896:1:exon

LOC120410713
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410713
product: uncharacterized LOC120410713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005603033.1
SIO_010081: LOC120410713
subclass of: SO_0000673
so part of: LOC120410713
location: join(300124..307030,315725..319896)
location: region:300124-319896:1
so has part: feature:300124-307030:1:exon
so has part: feature:315725-319896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300124-307030:1:exon

position:307030:1
position: 307030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315725-319896:1:exon

position:315725:1
position: 315725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

REEP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317923..338223)
location: region:317923-338223:-1
so has part: feature:317923-338223:-1:exon
subclass of: SO_0000010

104689457
type: Gene
SIO_000068: ncbigene

position:317923:-1
position: 317923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338223:-1
position: 338223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317923-338223:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: REEP2
product: receptor accessory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_039559335.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(317923..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,337666..337738,338106..338223))
location: region:317923-338223:-1
so has part: feature:338106-338223:-1:exon
so has part: feature:337666-337738:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:317923-327460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338106-338223:-1:exon

position:338106:-1
position: 338106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337666-337738:-1:exon

position:337666:-1
position: 337666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337738:-1
position: 337738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332386-332462:-1:exon

position:332386:-1
position: 332386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332462:-1
position: 332462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:330999-331119:-1:exon

position:330999:-1
position: 330999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331119:-1
position: 331119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330322-330435:-1:exon

position:330322:-1
position: 330322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330435:-1
position: 330435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329814-329961:-1:exon

position:329814:-1
position: 329814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329961:-1
position: 329961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329369-329526:-1:exon

position:329369:-1
position: 329369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329526:-1
position: 329526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317923-327460:-1:exon

position:327460:-1
position: 327460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: REEP2
product: receptor accessory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039559337.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(317923..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,334319..334376,337666..337738,338106..338118))
location: region:317923-338118:-1
so has part: feature:338106-338118:-1:exon
so has part: feature:337666-337738:-1:exon
so has part: feature:334319-334376:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:317923-327460:-1:exon

position:338118:-1
position: 338118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338106-338118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337666-337738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334319-334376:-1:exon

position:334319:-1
position: 334319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334376:-1
position: 334376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332386-332462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330999-331119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330322-330435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329814-329961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329369-329526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317923-327460:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: REEP2
product: receptor accessory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_039559336.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(317923..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,334304..334376,337666..337738,338106..338118))
location: region:317923-338118:-1
so has part: feature:338106-338118:-1:exon
so has part: feature:337666-337738:-1:exon
so has part: feature:334304-334376:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:317923-327460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338106-338118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337666-337738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334304-334376:-1:exon

position:334304:-1
position: 334304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332386-332462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330999-331119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330322-330435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329814-329961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329369-329526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317923-327460:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X1
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGAPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPVRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(327386..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,337666..337738,338106..338137))
location: region:327386-338137:-1
so has part: feature:338106-338137:-1:exon
so has part: feature:337666-337738:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:327386-327460:-1:exon

XP_039415269.1
type: Protein
SIO_000068: ncbiprotein

position:327386:-1
position: 327386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338137:-1
position: 338137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338106-338137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337666-337738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332386-332462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330999-331119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330322-330435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329814-329961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329369-329526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327386-327460:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X3
translation: MKMSSTDLNTDSCGIPLVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGAPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPVRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(327386..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,334319..334369))
location: region:327386-334369:-1
so has part: feature:334319-334369:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:327386-327460:-1:exon

XP_039415271.1
type: Protein
SIO_000068: ncbiprotein

position:334369:-1
position: 334369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334319-334369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332386-332462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330999-331119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330322-330435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329814-329961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329369-329526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327386-327460:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X2
translation: MKMSSTDLNTDSCGIPLVTFLIVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGAPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPVRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(327386..327460,329369..329526,329814..329961,330322..330435,330999..331119,332386..332462,334304..334369))
location: region:327386-334369:-1
so has part: feature:334304-334369:-1:exon
so has part: feature:332386-332462:-1:exon
so has part: feature:330999-331119:-1:exon
so has part: feature:330322-330435:-1:exon
so has part: feature:329814-329961:-1:exon
so has part: feature:329369-329526:-1:exon
so has part: feature:327386-327460:-1:exon

XP_039415270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334304-334369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332386-332462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330999-331119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330322-330435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329814-329961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329369-329526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327386-327460:-1:exon

KDM3B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344836..395486)
location: region:344836-395486:-1
so has part: feature:344836-395486:-1:exon
subclass of: SO_0000010

104689460
type: Gene
SIO_000068: ncbigene

position:344836:-1
position: 344836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395486:-1
position: 395486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344836-395486:-1:exon

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KDM3B
product: lysine demethylase 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_039559476.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(344836..346186,348184..348318,348912..349088,349426..349565,350072..350191,353350..353480,353567..353657,357244..357415,365217..365483,369026..369282,370149..370425,371093..371220,372688..372795,373775..373927,374990..375204,376544..376745,377065..378349,380748..381329,382249..382317,383040..383164,384627..384732,385182..385295,387704..387871,395243..395483))
location: region:344836-395483:-1
so has part: feature:395243-395483:-1:exon
so has part: feature:387704-387871:-1:exon
so has part: feature:385182-385295:-1:exon
so has part: feature:384627-384732:-1:exon
so has part: feature:383040-383164:-1:exon
so has part: feature:382249-382317:-1:exon
so has part: feature:380748-381329:-1:exon
so has part: feature:377065-378349:-1:exon
so has part: feature:376544-376745:-1:exon
so has part: feature:374990-375204:-1:exon
so has part: feature:373775-373927:-1:exon
so has part: feature:372688-372795:-1:exon
so has part: feature:371093-371220:-1:exon
so has part: feature:370149-370425:-1:exon
so has part: feature:369026-369282:-1:exon
so has part: feature:365217-365483:-1:exon
so has part: feature:357244-357415:-1:exon
so has part: feature:353567-353657:-1:exon
so has part: feature:353350-353480:-1:exon
so has part: feature:350072-350191:-1:exon
so has part: feature:349426-349565:-1:exon
so has part: feature:348912-349088:-1:exon
so has part: feature:348184-348318:-1:exon
so has part: feature:344836-346186:-1:exon

position:395483:-1
position: 395483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395243-395483:-1:exon

position:395243:-1
position: 395243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387704-387871:-1:exon

position:387704:-1
position: 387704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387871:-1
position: 387871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385182-385295:-1:exon

position:385182:-1
position: 385182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385295:-1
position: 385295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384627-384732:-1:exon

position:384627:-1
position: 384627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384732:-1
position: 384732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383040-383164:-1:exon

position:383040:-1
position: 383040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383164:-1
position: 383164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382249-382317:-1:exon

position:382249:-1
position: 382249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382317:-1
position: 382317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:380748-381329:-1:exon

position:380748:-1
position: 380748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381329:-1
position: 381329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377065-378349:-1:exon

position:377065:-1
position: 377065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378349:-1
position: 378349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376544-376745:-1:exon

position:376544:-1
position: 376544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376745:-1
position: 376745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:374990-375204:-1:exon

position:374990:-1
position: 374990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375204:-1
position: 375204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:373775-373927:-1:exon

position:373775:-1
position: 373775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373927:-1
position: 373927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:372688-372795:-1:exon

position:372688:-1
position: 372688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372795:-1
position: 372795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:371093-371220:-1:exon

position:371093:-1
position: 371093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371220:-1
position: 371220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:370149-370425:-1:exon

position:370149:-1
position: 370149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370425:-1
position: 370425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:369026-369282:-1:exon

position:369026:-1
position: 369026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369282:-1
position: 369282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:365217-365483:-1:exon

position:365217:-1
position: 365217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365483:-1
position: 365483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:357244-357415:-1:exon

position:357244:-1
position: 357244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357415:-1
position: 357415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:353567-353657:-1:exon

position:353567:-1
position: 353567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353657:-1
position: 353657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:353350-353480:-1:exon

position:353350:-1
position: 353350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353480:-1
position: 353480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:350072-350191:-1:exon

position:350072:-1
position: 350072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350191:-1
position: 350191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:349426-349565:-1:exon

position:349426:-1
position: 349426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349565:-1
position: 349565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:348912-349088:-1:exon

position:348912:-1
position: 348912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349088:-1
position: 349088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:348184-348318:-1:exon

position:348184:-1
position: 348184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348318:-1
position: 348318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:344836-346186:-1:exon

position:346186:-1
position: 346186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KDM3B
product: lysine demethylase 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 34 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039559477.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(344836..346186,348184..348318,348912..349088,349426..349565,350072..350191,353350..353480,353567..353657,357244..357415,365217..365483,369026..369282,370149..370425,371093..371220,372688..372795,373775..373927,374990..375204,376544..376745,377107..378349,380748..381329,382249..382317,383040..383164,384627..384732,385182..385295,387704..387871,395243..395413))
location: region:344836-395413:-1
so has part: feature:395243-395413:-1:exon
so has part: feature:387704-387871:-1:exon
so has part: feature:385182-385295:-1:exon
so has part: feature:384627-384732:-1:exon
so has part: feature:383040-383164:-1:exon
so has part: feature:382249-382317:-1:exon
so has part: feature:380748-381329:-1:exon
so has part: feature:377107-378349:-1:exon
so has part: feature:376544-376745:-1:exon
so has part: feature:374990-375204:-1:exon
so has part: feature:373775-373927:-1:exon
so has part: feature:372688-372795:-1:exon
so has part: feature:371093-371220:-1:exon
so has part: feature:370149-370425:-1:exon
so has part: feature:369026-369282:-1:exon
so has part: feature:365217-365483:-1:exon
so has part: feature:357244-357415:-1:exon
so has part: feature:353567-353657:-1:exon
so has part: feature:353350-353480:-1:exon
so has part: feature:350072-350191:-1:exon
so has part: feature:349426-349565:-1:exon
so has part: feature:348912-349088:-1:exon
so has part: feature:348184-348318:-1:exon
so has part: feature:344836-346186:-1:exon

position:395413:-1
position: 395413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395243-395413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387704-387871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385182-385295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384627-384732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383040-383164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382249-382317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380748-381329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377107-378349:-1:exon

position:377107:-1
position: 377107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376544-376745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374990-375204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373775-373927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372688-372795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371093-371220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370149-370425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369026-369282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365217-365483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357244-357415:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353567-353657:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353350-353480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:350072-350191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:349426-349565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:348912-349088:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:348184-348318:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344836-346186:-1:exon

KDM3B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: KDM3B
product: lysine demethylase 3B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_005603039.1
SIO_010081: KDM3B
so part of: KDM3B
location: complement(join(346084..346186,348184..348318,348912..349088,349426..349565,350072..350191,353350..353480,353567..353657,365217..365483,369026..369282,370149..370425,371093..371220,372688..372795,373775..373927,374990..375204,376544..376745,377065..378349,380748..381329,382249..382317,383040..383164,384627..384732,385182..385295,387704..387871,395243..395486))
location: region:346084-395486:-1
so has part: feature:395243-395486:-1:exon
so has part: feature:387704-387871:-1:exon
so has part: feature:385182-385295:-1:exon
so has part: feature:384627-384732:-1:exon
so has part: feature:383040-383164:-1:exon
so has part: feature:382249-382317:-1:exon
so has part: feature:380748-381329:-1:exon
so has part: feature:377065-378349:-1:exon
so has part: feature:376544-376745:-1:exon
so has part: feature:374990-375204:-1:exon
so has part: feature:373775-373927:-1:exon
so has part: feature:372688-372795:-1:exon
so has part: feature:371093-371220:-1:exon
so has part: feature:370149-370425:-1:exon
so has part: feature:369026-369282:-1:exon
so has part: feature:365217-365483:-1:exon
so has part: feature:353567-353657:-1:exon
so has part: feature:353350-353480:-1:exon
so has part: feature:350072-350191:-1:exon
so has part: feature:349426-349565:-1:exon
so has part: feature:348912-349088:-1:exon
so has part: feature:348184-348318:-1:exon
so has part: feature:346084-346186:-1:exon

position:346084:-1
position: 346084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395243-395486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387704-387871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385182-385295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384627-384732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383040-383164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382249-382317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380748-381329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377065-378349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376544-376745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374990-375204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373775-373927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372688-372795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371093-371220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370149-370425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369026-369282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365217-365483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:353567-353657:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353350-353480:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:350072-350191:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:349426-349565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348912-349088:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:348184-348318:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346084-346186:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X2
translation: MADAAASPVGKRLLLLLAAGPGEGETAGSEPGPALPARAWRSGTVRAMSGAVPQDLAIFVEFDGCNWNQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRISQAQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMATESQNQILQEQPSLRESVNALISDQKLQEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSIKGKKKKESLEGKDGRRRKNVSDPGCDPATKKLKERSEADSNGSDGGEASRGPWKGVSSSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTPLPFTPFSSVTGQPLLVGSGCKEAGKSLEQVGQGTVTSTTAVTTPALTPTTVRISDTSLPAVTGQEKLKAVRSQAQGENSRNSLLTSSGFGVSLPSASQSLVFGAGRSQSNGVMAPESKPSGFPFGCGTGQEAQKDSDSSKNLFFQCMSQNLPSSNYFTVISESLTEDVSSRDSFKQCTESVGAGTCKGKVISVDTKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKAELSPFSGFASSSQTGVCAPSTPVGHKATSGWPETLTSTDSLAKKKTLFITTDSSKMISSASGSTAAAGVQSPSTVGNGRSSSPTSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNVFGRHPPTLFSSHVEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEDQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNPSASVSGNENTFSTGAGAAAVGQVEMDTVPKSEATDSRIEDSAKMETLPTNNTEVKTNRPLCPETAPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPSDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQREVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(346106..346186,348184..348318,348912..349088,349426..349565,350072..350191,353350..353480,353567..353657,357244..357415,365217..365483,369026..369282,370149..370425,371093..371220,372688..372795,373775..373927,374990..375204,376544..376745,377107..378349,380748..381329,382249..382317,383040..383164,384627..384732,385182..385295,387704..387871,395243..395413))
location: region:346106-395413:-1
so has part: feature:395243-395413:-1:exon
so has part: feature:387704-387871:-1:exon
so has part: feature:385182-385295:-1:exon
so has part: feature:384627-384732:-1:exon
so has part: feature:383040-383164:-1:exon
so has part: feature:382249-382317:-1:exon
so has part: feature:380748-381329:-1:exon
so has part: feature:377107-378349:-1:exon
so has part: feature:376544-376745:-1:exon
so has part: feature:374990-375204:-1:exon
so has part: feature:373775-373927:-1:exon
so has part: feature:372688-372795:-1:exon
so has part: feature:371093-371220:-1:exon
so has part: feature:370149-370425:-1:exon
so has part: feature:369026-369282:-1:exon
so has part: feature:365217-365483:-1:exon
so has part: feature:357244-357415:-1:exon
so has part: feature:353567-353657:-1:exon
so has part: feature:353350-353480:-1:exon
so has part: feature:350072-350191:-1:exon
so has part: feature:349426-349565:-1:exon
so has part: feature:348912-349088:-1:exon
so has part: feature:348184-348318:-1:exon
so has part: feature:346106-346186:-1:exon

XP_039415411.1
type: Protein
SIO_000068: ncbiprotein

position:346106:-1
position: 346106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395243-395413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387704-387871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385182-385295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384627-384732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383040-383164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382249-382317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380748-381329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377107-378349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376544-376745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374990-375204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373775-373927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372688-372795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371093-371220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370149-370425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369026-369282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365217-365483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357244-357415:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353567-353657:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353350-353480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:350072-350191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:349426-349565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:348912-349088:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:348184-348318:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:346106-346186:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X1
translation: MADAAASPVGKRLLLLLAAGPGEGETAGSEPGPALPARAWRSGTVRAMSGAVPQDLAIFVEFDGCNWNQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRISQAQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMATESQNQILQEQPSLRESVNALISDQKLQEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSIKGKKKKESLEGKDGRRRKNVSDPGCDPATKKLKERSEADSNGSDGGEASRGPWKGVSSSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTPLPFTPFSSVTGQPLLVGSGCKEAGKSLEQVGQGTVTSTTAVTTPALTPTTVRISDTSLPAVTGQEKLKAVRSQAQGENSRNSLLTSSGFGVSLPSASQSLVFGAGRSQSNGVMAPESKPSGFPFGCGTGQEAQKDSDSSKNLFFQCMSQNLPSSNYFTVISESLTEDVSSRDSFKQCTESVGAGTCKGKVISVDTKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKAELSPFSGFASSSQTGVCAPSTPVGHKATSGWPETLTSTDSLAKKKTLFITTDSSKMISSASGSTAAAGVQSPSTVGNGRSSSPTSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNVFGRHPPTLFSSHVEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEDQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKGDDLNADNVLEAQRVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNPSASVSGNENTFSTGAGAAAVGQVEMDTVPKSEATDSRIEDSAKMETLPTNNTEVKTNRPLCPETAPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPSDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQREVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(346106..346186,348184..348318,348912..349088,349426..349565,350072..350191,353350..353480,353567..353657,357244..357415,365217..365483,369026..369282,370149..370425,371093..371220,372688..372795,373775..373927,374990..375204,376544..376745,377065..378349,380748..381329,382249..382317,383040..383164,384627..384732,385182..385295,387704..387871,395243..395413))
location: region:346106-395413:-1
so has part: feature:395243-395413:-1:exon
so has part: feature:387704-387871:-1:exon
so has part: feature:385182-385295:-1:exon
so has part: feature:384627-384732:-1:exon
so has part: feature:383040-383164:-1:exon
so has part: feature:382249-382317:-1:exon
so has part: feature:380748-381329:-1:exon
so has part: feature:377065-378349:-1:exon
so has part: feature:376544-376745:-1:exon
so has part: feature:374990-375204:-1:exon
so has part: feature:373775-373927:-1:exon
so has part: feature:372688-372795:-1:exon
so has part: feature:371093-371220:-1:exon
so has part: feature:370149-370425:-1:exon
so has part: feature:369026-369282:-1:exon
so has part: feature:365217-365483:-1:exon
so has part: feature:357244-357415:-1:exon
so has part: feature:353567-353657:-1:exon
so has part: feature:353350-353480:-1:exon
so has part: feature:350072-350191:-1:exon
so has part: feature:349426-349565:-1:exon
so has part: feature:348912-349088:-1:exon
so has part: feature:348184-348318:-1:exon
so has part: feature:346106-346186:-1:exon

XP_039415410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395243-395413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387704-387871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385182-385295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384627-384732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383040-383164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382249-382317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380748-381329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377065-378349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376544-376745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374990-375204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373775-373927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372688-372795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371093-371220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370149-370425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369026-369282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365217-365483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357244-357415:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353567-353657:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353350-353480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:350072-350191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:349426-349565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:348912-349088:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:348184-348318:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:346106-346186:-1:exon

LOC104689459
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397432..408780)
location: region:397432-408780:-1
so has part: feature:397432-408780:-1:exon
subclass of: SO_0000010

104689459
type: Gene
SIO_000068: ncbigene

position:397432:-1
position: 397432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408780:-1
position: 408780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397432-408780:-1:exon

LOC104689459
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689459
product: C-terminal-binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010399570.3
SIO_010081: LOC104689459
subclass of: SO_0000673
so part of: LOC104689459
location: complement(join(397432..401099,402143..402263,402810..402937,403221..403351,404137..404351,404960..405166,407636..407780,407871..408025,408615..408780))
location: region:397432-408780:-1
so has part: feature:408615-408780:-1:exon
so has part: feature:407871-408025:-1:exon
so has part: feature:407636-407780:-1:exon
so has part: feature:404960-405166:-1:exon
so has part: feature:404137-404351:-1:exon
so has part: feature:403221-403351:-1:exon
so has part: feature:402810-402937:-1:exon
so has part: feature:402143-402263:-1:exon
so has part: feature:397432-401099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408615-408780:-1:exon

position:408615:-1
position: 408615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407871-408025:-1:exon

position:407871:-1
position: 407871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408025:-1
position: 408025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:407636-407780:-1:exon

position:407636:-1
position: 407636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407780:-1
position: 407780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404960-405166:-1:exon

position:404960:-1
position: 404960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405166:-1
position: 405166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404137-404351:-1:exon

position:404137:-1
position: 404137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404351:-1
position: 404351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:403221-403351:-1:exon

position:403221:-1
position: 403221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403351:-1
position: 403351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:402810-402937:-1:exon

position:402810:-1
position: 402810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402937:-1
position: 402937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:402143-402263:-1:exon

position:402143:-1
position: 402143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402263:-1
position: 402263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:397432-401099:-1:exon

position:401099:-1
position: 401099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689459
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-terminal-binding protein 2
translation: MPLAWAKSRLSGSAGAARAASDGSRVLPRRRGRRGPARPMDRHKVKRQRLDRICEGIRPPIVNGPMPARPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLSRQDLEKFKALRVIVRIGSGYDNVDIKSAAELGIAVCNIPSSSVEETADSTLCHILNLYRRVTWLHQALREGNRASSVEQIREVAGGAVRIRGETLGIIGLGRVGQAVALRAKSFGFNVIFYDPYLPDGVERSLGLQRVGTLQDLLMHSDCITLHCSLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKEGRIRGTALDVHESEPFSFTQGPLKDAPNVICTPHTAWYSEQASIESREDAAKEIRRAITGHIPDALRNCVNKEYLLLAAQWSNIDPATVHPELNGAAAYRFPPGVVGVANPGLPEPPVVEGIVAHGIPPVSHSAPRTPSPGETSKLDADREIPADQ
SIO_010081: LOC104689459
subclass of: SO_0000673
so part of: LOC104689459
location: complement(join(400928..401099,402143..402263,402810..402937,403221..403351,404137..404351,404960..405166,407636..407780,407871..408025,408615..408780))
location: region:400928-408780:-1
so has part: feature:408615-408780:-1:exon
so has part: feature:407871-408025:-1:exon
so has part: feature:407636-407780:-1:exon
so has part: feature:404960-405166:-1:exon
so has part: feature:404137-404351:-1:exon
so has part: feature:403221-403351:-1:exon
so has part: feature:402810-402937:-1:exon
so has part: feature:402143-402263:-1:exon
so has part: feature:400928-401099:-1:exon

XP_010397872.1
type: Protein
SIO_000068: ncbiprotein

position:400928:-1
position: 400928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408615-408780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407871-408025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407636-407780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404960-405166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404137-404351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403221-403351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402810-402937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402143-402263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400928-401099:-1:exon

LOC109144611
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109144611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 408705..409376
location: region:408705-409376:1
so has part: feature:408705-409376:1:exon
subclass of: SO_0000011

109144611
type: Gene
SIO_000068: ncbigene

position:408705:1
position: 408705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409376:1
position: 409376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408705-409376:1:exon

LOC109144611
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109144611
product: uncharacterized LOC109144611
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_002045479.2
SIO_010081: LOC109144611
subclass of: SO_0000673
so part of: LOC109144611
location: join(408705..408815,409086..409376)
location: region:408705-409376:1
so has part: feature:408705-408815:1:exon
so has part: feature:409086-409376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408705-408815:1:exon

position:408815:1
position: 408815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409086-409376:1:exon

position:409086:1
position: 409086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414922..423705
location: region:414922-423705:1
so has part: feature:414922-423705:1:exon
subclass of: SO_0000010

104689461
type: Gene
SIO_000068: ncbigene

position:414922:1
position: 414922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423705:1
position: 423705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414922-423705:1:exon

GFRA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GFRA3
product: GDNF family receptor alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010399573.2
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(414922..415038,418486..418761,419456..419548,419973..420318,420392..420501,421581..421715,422679..422809,423110..423705)
location: region:414922-423705:1
so has part: feature:414922-415038:1:exon
so has part: feature:418486-418761:1:exon
so has part: feature:419456-419548:1:exon
so has part: feature:419973-420318:1:exon
so has part: feature:420392-420501:1:exon
so has part: feature:421581-421715:1:exon
so has part: feature:422679-422809:1:exon
so has part: feature:423110-423705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414922-415038:1:exon

position:415038:1
position: 415038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418486-418761:1:exon

position:418486:1
position: 418486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418761:1
position: 418761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419456-419548:1:exon

position:419456:1
position: 419456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419548:1
position: 419548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419973-420318:1:exon

position:419973:1
position: 419973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420318:1
position: 420318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420392-420501:1:exon

position:420392:1
position: 420392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420501:1
position: 420501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:421581-421715:1:exon

position:421581:1
position: 421581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421715:1
position: 421715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422679-422809:1:exon

position:422679:1
position: 422679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422809:1
position: 422809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:423110-423705:1:exon

position:423110:1
position: 423110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDNF family receptor alpha-3
translation: MGPALLLGLLLSRAGDLMALPSSDCVVAEQLCLSDSTCNATYRTLENCALAKTRLLSLDHDSRVRCLNAELDLGNSSLLHCKCHRRMKKQEHCLRIFWTVHSSMTDGYFNLETSPYENPANEEHWKTDYNKLAALVSGSQLAGDATNSCLKATHVCNLSKKCFRLRTDYASICTKGAGSEDVCDRRKCHRGLRNFFEKVPEDFTKRILFCPCQDEFCGERRRKTIVPDCSFQYNTKPNCLWLLDSCLEDHICKSRLADFQQNCQPVDMSPDGCSLHNHAACLQAYMGMIGTPMTPNYVSNSSVEVSLWCTCENSGNQKEKCDQILGMFESNKCLENTIWSQMHLKQTALERQEDLLYSSSLSFQGDSASTSLSSDTSQVAEGKKERDSSVQSSMPIASSVYSGATTSWPSLALFLPLLLSPH
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(414996..415038,418486..418761,419456..419548,419973..420318,420392..420501,421581..421715,422679..422809,423110..423244)
location: region:414996-423244:1
so has part: feature:414996-415038:1:exon
so has part: feature:418486-418761:1:exon
so has part: feature:419456-419548:1:exon
so has part: feature:419973-420318:1:exon
so has part: feature:420392-420501:1:exon
so has part: feature:421581-421715:1:exon
so has part: feature:422679-422809:1:exon
so has part: feature:423110-423244:1:exon

XP_010397875.1
type: Protein
SIO_000068: ncbiprotein

position:414996:1
position: 414996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423244:1
position: 423244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414996-415038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418486-418761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419456-419548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419973-420318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420392-420501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:421581-421715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422679-422809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:423110-423244:1:exon

CDC23
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 446192..455152
location: region:446192-455152:1
so has part: feature:446192-455152:1:exon
subclass of: SO_0000010

104689462
type: Gene
SIO_000068: ncbigene

position:446192:1
position: 446192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455152:1
position: 455152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446192-455152:1:exon

CDC23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CDC23
product: cell division cycle 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_010399574.2
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(446192..446339,446826..446898,447789..447926,448189..448231,448592..448697,448783..448915,449869..450046,450136..450233,450455..450536,451112..451265,451401..451520,451879..451954,452231..452292,453153..453231,453331..453450,454326..455152)
location: region:446192-455152:1
so has part: feature:446192-446339:1:exon
so has part: feature:446826-446898:1:exon
so has part: feature:447789-447926:1:exon
so has part: feature:448189-448231:1:exon
so has part: feature:448592-448697:1:exon
so has part: feature:448783-448915:1:exon
so has part: feature:449869-450046:1:exon
so has part: feature:450136-450233:1:exon
so has part: feature:450455-450536:1:exon
so has part: feature:451112-451265:1:exon
so has part: feature:451401-451520:1:exon
so has part: feature:451879-451954:1:exon
so has part: feature:452231-452292:1:exon
so has part: feature:453153-453231:1:exon
so has part: feature:453331-453450:1:exon
so has part: feature:454326-455152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446192-446339:1:exon

position:446339:1
position: 446339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446826-446898:1:exon

position:446826:1
position: 446826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446898:1
position: 446898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447789-447926:1:exon

position:447789:1
position: 447789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447926:1
position: 447926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:448189-448231:1:exon

position:448189:1
position: 448189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448231:1
position: 448231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:448592-448697:1:exon

position:448592:1
position: 448592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448697:1
position: 448697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:448783-448915:1:exon

position:448783:1
position: 448783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448915:1
position: 448915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449869-450046:1:exon

position:449869:1
position: 449869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450046:1
position: 450046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:450136-450233:1:exon

position:450136:1
position: 450136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450233:1
position: 450233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:450455-450536:1:exon

position:450455:1
position: 450455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450536:1
position: 450536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451112-451265:1:exon

position:451112:1
position: 451112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451265:1
position: 451265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451401-451520:1:exon

position:451401:1
position: 451401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451520:1
position: 451520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:451879-451954:1:exon

position:451879:1
position: 451879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451954:1
position: 451954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:452231-452292:1:exon

position:452231:1
position: 452231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452292:1
position: 452292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:453153-453231:1:exon

position:453153:1
position: 453153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453231:1
position: 453231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:453331-453450:1:exon

position:453331:1
position: 453331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453450:1
position: 453450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:454326-455152:1:exon

position:454326:1
position: 454326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 23 homolog
translation: MAAAAMVAAAAGGGDFSDLREIKKQLLSVAERSRERGLQHSGKWAAELAFALEPLPLSELPPPPVLTEEDARDLDAYTLAKSYFDLKEYDRAAYFLRGCKSQKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKKHKAQELDGFGLYLYGVVLRKLDLVKEAIDVFVEAAHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQSLIDAGFSKSTYIISQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKPELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLNESEQAAQCYIKYIQDIYSCGEVVEHLEVSTAFRYLAQYYFKCKLWDEASACAQKCCAFNDTREEGKALLRQILQLRNQGETSSTDVAAPFFLPASLSANNTPTRRVSPLNLSSVTP
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(446209..446339,446826..446898,447789..447926,448189..448231,448592..448697,448783..448915,449869..450046,450136..450233,450455..450536,451112..451265,451401..451520,451879..451954,452231..452292,453153..453231,453331..453450,454326..454496)
location: region:446209-454496:1
so has part: feature:446209-446339:1:exon
so has part: feature:446826-446898:1:exon
so has part: feature:447789-447926:1:exon
so has part: feature:448189-448231:1:exon
so has part: feature:448592-448697:1:exon
so has part: feature:448783-448915:1:exon
so has part: feature:449869-450046:1:exon
so has part: feature:450136-450233:1:exon
so has part: feature:450455-450536:1:exon
so has part: feature:451112-451265:1:exon
so has part: feature:451401-451520:1:exon
so has part: feature:451879-451954:1:exon
so has part: feature:452231-452292:1:exon
so has part: feature:453153-453231:1:exon
so has part: feature:453331-453450:1:exon
so has part: feature:454326-454496:1:exon

XP_010397876.1
type: Protein
SIO_000068: ncbiprotein

position:446209:1
position: 446209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454496:1
position: 454496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446209-446339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446826-446898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447789-447926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448189-448231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448592-448697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448783-448915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449869-450046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450136-450233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450455-450536:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451112-451265:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451401-451520:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:451879-451954:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:452231-452292:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:453153-453231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:453331-453450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:454326-454496:1:exon

JAKMIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 456247..502561
location: region:456247-502561:1
so has part: feature:456247-502561:1:exon
subclass of: SO_0000010

104689463
type: Gene
SIO_000068: ncbigene

position:456247:1
position: 456247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502561:1
position: 502561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456247-502561:1:exon

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039559491.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(456247..456384,471619..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492611,496906..502561)
location: region:456247-502561:1
so has part: feature:456247-456384:1:exon
so has part: feature:471619-471884:1:exon
so has part: feature:472463-472960:1:exon
so has part: feature:474219-474428:1:exon
so has part: feature:475382-475480:1:exon
so has part: feature:476161-476307:1:exon
so has part: feature:478066-478206:1:exon
so has part: feature:479098-479154:1:exon
so has part: feature:480958-481077:1:exon
so has part: feature:482562-482690:1:exon
so has part: feature:483682-483765:1:exon
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urn:…
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SIO_000300: 18
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JAKMIP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005603041.1
SIO_010081: JAKMIP2
so part of: JAKMIP2
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location: region:456247-502561:1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 9
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SIO_000628: feature:484070-484132:1:exon

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SIO_000628: feature:484301-484399:1:exon

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SIO_000300: 14
SIO_000628: feature:485766-485864:1:exon

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SIO_000300: 17
SIO_000628: feature:487899-487967:1:exon

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SIO_000300: 18
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SIO_000300: 19
SIO_000628: feature:489667-489870:1:exon

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SIO_000300: 20
SIO_000628: feature:491811-491876:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492539-492611:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496906-497059:1:exon

position:497059:1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:498383-502561:1:exon

position:498383:1
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reference: sequence
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JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039559493.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(456247..456384,471619..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492611,498383..502561)
location: region:456247-502561:1
so has part: feature:456247-456384:1:exon
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urn:…
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SIO_000628: feature:484070-484132:1:exon

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SIO_000628: feature:484301-484399:1:exon

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SIO_000300: 14
SIO_000628: feature:485766-485864:1:exon

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SIO_000300: 15
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SIO_000300: 16
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:492539-492611:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:498383-502561:1:exon

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039559495.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(456247..456384,471619..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491789..491818)
location: region:456247-491818:1
so has part: feature:456247-456384:1:exon
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position:491818:1
position: 491818
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
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SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:491789-491818:1:exon

position:491789:1
position: 491789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039559494.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(462084..462107,471619..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492611,496906..502561)
location: region:462084-502561:1
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position:462084:1
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urn:…
SIO_000300: 1
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position:462107:1
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reference: sequence
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urn:…
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urn:…
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SIO_000628: feature:472463-472960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474219-474428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475382-475480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476161-476307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478066-478206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479098-479154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480958-481077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482562-482690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:483682-483765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484070-484132:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484301-484399:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485766-485864:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486187-486240:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:486996-487061:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:487899-487967:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:488965-489042:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:491811-491876:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492539-492611:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496906-502561:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(471756..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492589)
location: region:471756-492589:1
so has part: feature:471756-471884:1:exon
so has part: feature:472463-472960:1:exon
so has part: feature:474219-474428:1:exon
so has part: feature:475382-475480:1:exon
so has part: feature:476161-476307:1:exon
so has part: feature:478066-478206:1:exon
so has part: feature:479098-479154:1:exon
so has part: feature:480958-481077:1:exon
so has part: feature:482562-482690:1:exon
so has part: feature:483682-483765:1:exon
so has part: feature:484070-484132:1:exon
so has part: feature:484301-484399:1:exon
so has part: feature:485766-485864:1:exon
so has part: feature:486187-486240:1:exon
so has part: feature:486996-487061:1:exon
so has part: feature:487899-487967:1:exon
so has part: feature:488965-489042:1:exon
so has part: feature:489667-489870:1:exon
so has part: feature:491811-491876:1:exon
so has part: feature:492539-492589:1:exon

XP_039415425.1
type: Protein
SIO_000068: ncbiprotein

position:471756:1
position: 471756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492589:1
position: 492589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471756-471884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472463-472960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474219-474428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475382-475480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476161-476307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478066-478206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479098-479154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480958-481077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482562-482690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483682-483765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484070-484132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484301-484399:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485766-485864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486187-486240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486996-487061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487899-487967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488965-489042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491811-491876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492539-492589:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(471756..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492589)
location: region:471756-492589:1
so has part: feature:471756-471884:1:exon
so has part: feature:472463-472960:1:exon
so has part: feature:474219-474428:1:exon
so has part: feature:475382-475480:1:exon
so has part: feature:476161-476307:1:exon
so has part: feature:478066-478206:1:exon
so has part: feature:479098-479154:1:exon
so has part: feature:480958-481077:1:exon
so has part: feature:482562-482690:1:exon
so has part: feature:483682-483765:1:exon
so has part: feature:484070-484132:1:exon
so has part: feature:484301-484399:1:exon
so has part: feature:485766-485864:1:exon
so has part: feature:486187-486240:1:exon
so has part: feature:486996-487061:1:exon
so has part: feature:487899-487967:1:exon
so has part: feature:488965-489042:1:exon
so has part: feature:489667-489870:1:exon
so has part: feature:491811-491876:1:exon
so has part: feature:492539-492589:1:exon

XP_039415427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471756-471884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472463-472960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474219-474428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475382-475480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476161-476307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478066-478206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479098-479154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480958-481077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482562-482690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483682-483765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484070-484132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484301-484399:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485766-485864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486187-486240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486996-487061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487899-487967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488965-489042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491811-491876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492539-492589:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(471756..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491811..491876,492539..492589)
location: region:471756-492589:1
so has part: feature:471756-471884:1:exon
so has part: feature:472463-472960:1:exon
so has part: feature:474219-474428:1:exon
so has part: feature:475382-475480:1:exon
so has part: feature:476161-476307:1:exon
so has part: feature:478066-478206:1:exon
so has part: feature:479098-479154:1:exon
so has part: feature:480958-481077:1:exon
so has part: feature:482562-482690:1:exon
so has part: feature:483682-483765:1:exon
so has part: feature:484070-484132:1:exon
so has part: feature:484301-484399:1:exon
so has part: feature:485766-485864:1:exon
so has part: feature:486187-486240:1:exon
so has part: feature:486996-487061:1:exon
so has part: feature:487899-487967:1:exon
so has part: feature:488965-489042:1:exon
so has part: feature:489667-489870:1:exon
so has part: feature:491811-491876:1:exon
so has part: feature:492539-492589:1:exon

XP_039415428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471756-471884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472463-472960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474219-474428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475382-475480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476161-476307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478066-478206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479098-479154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480958-481077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482562-482690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483682-483765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484070-484132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484301-484399:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485766-485864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486187-486240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486996-487061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487899-487967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488965-489042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491811-491876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492539-492589:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X2
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQMFLF
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(471756..471884,472463..472960,474219..474428,475382..475480,476161..476307,478066..478206,479098..479154,480958..481077,482562..482690,483682..483765,484070..484132,484301..484399,485766..485864,486187..486240,486996..487061,487899..487967,488965..489042,489667..489870,491789..491803)
location: region:471756-491803:1
so has part: feature:471756-471884:1:exon
so has part: feature:472463-472960:1:exon
so has part: feature:474219-474428:1:exon
so has part: feature:475382-475480:1:exon
so has part: feature:476161-476307:1:exon
so has part: feature:478066-478206:1:exon
so has part: feature:479098-479154:1:exon
so has part: feature:480958-481077:1:exon
so has part: feature:482562-482690:1:exon
so has part: feature:483682-483765:1:exon
so has part: feature:484070-484132:1:exon
so has part: feature:484301-484399:1:exon
so has part: feature:485766-485864:1:exon
so has part: feature:486187-486240:1:exon
so has part: feature:486996-487061:1:exon
so has part: feature:487899-487967:1:exon
so has part: feature:488965-489042:1:exon
so has part: feature:489667-489870:1:exon
so has part: feature:491789-491803:1:exon

XP_039415429.1
type: Protein
SIO_000068: ncbiprotein

position:491803:1
position: 491803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471756-471884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472463-472960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474219-474428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475382-475480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476161-476307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478066-478206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479098-479154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480958-481077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482562-482690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483682-483765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484070-484132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484301-484399:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485766-485864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486187-486240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486996-487061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487899-487967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488965-489042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489667-489870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491789-491803:1:exon

DPYSL3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 516491..548488
location: region:516491-548488:1
so has part: feature:516491-548488:1:exon
subclass of: SO_0000010

104689464
type: Gene
SIO_000068: ncbigene

position:516491:1
position: 516491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548488:1
position: 548488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516491-548488:1:exon

DPYSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DPYSL3
product: dihydropyrimidinase like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_039559741.1
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(516491..516830,533859..533947,536172..536356,537373..537537,537748..537809,538217..538297,539359..539427,541915..542035,542728..542884,545209..545350,545690..545860,546459..546638,547189..547351,547795..548488)
location: region:516491-548488:1
so has part: feature:516491-516830:1:exon
so has part: feature:533859-533947:1:exon
so has part: feature:536172-536356:1:exon
so has part: feature:537373-537537:1:exon
so has part: feature:537748-537809:1:exon
so has part: feature:538217-538297:1:exon
so has part: feature:539359-539427:1:exon
so has part: feature:541915-542035:1:exon
so has part: feature:542728-542884:1:exon
so has part: feature:545209-545350:1:exon
so has part: feature:545690-545860:1:exon
so has part: feature:546459-546638:1:exon
so has part: feature:547189-547351:1:exon
so has part: feature:547795-548488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516491-516830:1:exon

position:516830:1
position: 516830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533859-533947:1:exon

position:533859:1
position: 533859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533947:1
position: 533947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536172-536356:1:exon

position:536172:1
position: 536172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536356:1
position: 536356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537373-537537:1:exon

position:537373:1
position: 537373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537537:1
position: 537537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537748-537809:1:exon

position:537748:1
position: 537748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537809:1
position: 537809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:538217-538297:1:exon

position:538217:1
position: 538217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538297:1
position: 538297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539359-539427:1:exon

position:539359:1
position: 539359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539427:1
position: 539427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:541915-542035:1:exon

position:541915:1
position: 541915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542035:1
position: 542035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:542728-542884:1:exon

position:542728:1
position: 542728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542884:1
position: 542884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:545209-545350:1:exon

position:545209:1
position: 545209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545350:1
position: 545350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:545690-545860:1:exon

position:545690:1
position: 545690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545860:1
position: 545860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:546459-546638:1:exon

position:546459:1
position: 546459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546638:1
position: 546638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:547189-547351:1:exon

position:547189:1
position: 547189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547351:1
position: 547351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:547795-548488:1:exon

position:547795:1
position: 547795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPYSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X1
translation: MAADGRRDDEELPVYLARPGSAAVPRQKRGGLFCSVEGAFESKTLDFGALRVGQRRAPPPTRPGPDPDPPPGAAPGSGPTAGDLRAASGEERLQDPAPADDGSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTRLQMPYRGMTAVDDFFQGTKAALAGGTTMIMDHVVPEPESSLAEALERWREWADGKACCDYALHVDIPRWSDHVRQELHTMVQEKGINSFMVYMAYKDLYQMSNTELYEIFSCLAELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGIVVFGEPITASLGTDGTHYWSKNWAKAAAFVVSPPLSPDPTTPDYINSLLASGDLQVSGSAHCTFSTAQKAIGKDNFTAIPEGTNGIEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIITAKTHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGTGRFLPSSPFPDYVYKRIKARRKMAEMHAVPRGLYDGPVFDLTTTPKGGTPAGSTRESPTRQTPPVRNLHQSGFSLSGTQVDEGMRSASKRIVAPPGGRSNITSLS
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(516525..516830,533859..533947,536172..536356,537373..537537,537748..537809,538217..538297,539359..539427,541915..542035,542728..542884,545209..545350,545690..545860,546459..546638,547189..547351,547795..547883)
location: region:516525-547883:1
so has part: feature:516525-516830:1:exon
so has part: feature:533859-533947:1:exon
so has part: feature:536172-536356:1:exon
so has part: feature:537373-537537:1:exon
so has part: feature:537748-537809:1:exon
so has part: feature:538217-538297:1:exon
so has part: feature:539359-539427:1:exon
so has part: feature:541915-542035:1:exon
so has part: feature:542728-542884:1:exon
so has part: feature:545209-545350:1:exon
so has part: feature:545690-545860:1:exon
so has part: feature:546459-546638:1:exon
so has part: feature:547189-547351:1:exon
so has part: feature:547795-547883:1:exon

XP_039415675.1
type: Protein
SIO_000068: ncbiprotein

position:516525:1
position: 516525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547883:1
position: 547883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516525-516830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533859-533947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536172-536356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537373-537537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537748-537809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538217-538297:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539359-539427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541915-542035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542728-542884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545209-545350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545690-545860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546459-546638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:547189-547351:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:547795-547883:1:exon

DPYSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DPYSL3
product: dihydropyrimidinase like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_039559742.1
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(527116..527256,533859..533947,536172..536356,537373..537537,537748..537809,538217..538297,539359..539427,541915..542035,542728..542884,545209..545350,545690..545860,546459..546638,547189..547351,547795..548488)
location: region:527116-548488:1
so has part: feature:527116-527256:1:exon
so has part: feature:533859-533947:1:exon
so has part: feature:536172-536356:1:exon
so has part: feature:537373-537537:1:exon
so has part: feature:537748-537809:1:exon
so has part: feature:538217-538297:1:exon
so has part: feature:539359-539427:1:exon
so has part: feature:541915-542035:1:exon
so has part: feature:542728-542884:1:exon
so has part: feature:545209-545350:1:exon
so has part: feature:545690-545860:1:exon
so has part: feature:546459-546638:1:exon
so has part: feature:547189-547351:1:exon
so has part: feature:547795-548488:1:exon

position:527116:1
position: 527116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527116-527256:1:exon

position:527256:1
position: 527256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533859-533947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536172-536356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537373-537537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537748-537809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538217-538297:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539359-539427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541915-542035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542728-542884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545209-545350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545690-545860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546459-546638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:547189-547351:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:547795-548488:1:exon

DPYSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X2
translation: MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTRLQMPYRGMTAVDDFFQGTKAALAGGTTMIMDHVVPEPESSLAEALERWREWADGKACCDYALHVDIPRWSDHVRQELHTMVQEKGINSFMVYMAYKDLYQMSNTELYEIFSCLAELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGIVVFGEPITASLGTDGTHYWSKNWAKAAAFVVSPPLSPDPTTPDYINSLLASGDLQVSGSAHCTFSTAQKAIGKDNFTAIPEGTNGIEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIITAKTHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGTGRFLPSSPFPDYVYKRIKARRKMAEMHAVPRGLYDGPVFDLTTTPKGGTPAGSTRESPTRQTPPVRNLHQSGFSLSGTQVDEGMRSASKRIVAPPGGRSNITSLS
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(527218..527256,533859..533947,536172..536356,537373..537537,537748..537809,538217..538297,539359..539427,541915..542035,542728..542884,545209..545350,545690..545860,546459..546638,547189..547351,547795..547883)
location: region:527218-547883:1
so has part: feature:527218-527256:1:exon
so has part: feature:533859-533947:1:exon
so has part: feature:536172-536356:1:exon
so has part: feature:537373-537537:1:exon
so has part: feature:537748-537809:1:exon
so has part: feature:538217-538297:1:exon
so has part: feature:539359-539427:1:exon
so has part: feature:541915-542035:1:exon
so has part: feature:542728-542884:1:exon
so has part: feature:545209-545350:1:exon
so has part: feature:545690-545860:1:exon
so has part: feature:546459-546638:1:exon
so has part: feature:547189-547351:1:exon
so has part: feature:547795-547883:1:exon

XP_039415676.1
type: Protein
SIO_000068: ncbiprotein

position:527218:1
position: 527218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527218-527256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533859-533947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536172-536356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537373-537537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537748-537809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538217-538297:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539359-539427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541915-542035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542728-542884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545209-545350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545690-545860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546459-546638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:547189-547351:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:547795-547883:1:exon

STK32A
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(550420..574824)
location: region:550420-574824:-1
so has part: feature:550420-574824:-1:exon
subclass of: SO_0000010

104689466
type: Gene
SIO_000068: ncbigene

position:550420:-1
position: 550420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574824:-1
position: 574824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550420-574824:-1:exon

STK32A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: STK32A
product: serine/threonine kinase 32A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039559946.1
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(550420..551481,551753..551817,552163..552291,553226..553351,555072..555188,557005..557102,558350..558439,563380..563417,565990..566163,566984..567135,568135..568190,572044..572220,574702..574824))
location: region:550420-574824:-1
so has part: feature:574702-574824:-1:exon
so has part: feature:572044-572220:-1:exon
so has part: feature:568135-568190:-1:exon
so has part: feature:566984-567135:-1:exon
so has part: feature:565990-566163:-1:exon
so has part: feature:563380-563417:-1:exon
so has part: feature:558350-558439:-1:exon
so has part: feature:557005-557102:-1:exon
so has part: feature:555072-555188:-1:exon
so has part: feature:553226-553351:-1:exon
so has part: feature:552163-552291:-1:exon
so has part: feature:551753-551817:-1:exon
so has part: feature:550420-551481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:574702-574824:-1:exon

position:574702:-1
position: 574702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572044-572220:-1:exon

position:572044:-1
position: 572044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572220:-1
position: 572220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568135-568190:-1:exon

position:568135:-1
position: 568135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568190:-1
position: 568190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:566984-567135:-1:exon

position:566984:-1
position: 566984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567135:-1
position: 567135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:565990-566163:-1:exon

position:565990:-1
position: 565990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566163:-1
position: 566163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563380-563417:-1:exon

position:563380:-1
position: 563380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563417:-1
position: 563417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:558350-558439:-1:exon

position:558350:-1
position: 558350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558439:-1
position: 558439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557005-557102:-1:exon

position:557005:-1
position: 557005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557102:-1
position: 557102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555072-555188:-1:exon

position:555072:-1
position: 555072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555188:-1
position: 555188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:553226-553351:-1:exon

position:553226:-1
position: 553226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553351:-1
position: 553351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:552163-552291:-1:exon

position:552163:-1
position: 552163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552291:-1
position: 552291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:551753-551817:-1:exon

position:551753:-1
position: 551753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551817:-1
position: 551817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:550420-551481:-1:exon

position:551481:-1
position: 551481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK32A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32A
translation: MGATTSSKSPPFDGNEDVTFDHFEILRAIGKGSFGKVCVVQKTDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVRFQEGAVKLFICELVLALDYLQSRHIIHRDIKPDNILLDEHGHVHITDFNIATMLTKESHVTTIAGTKPYMAPEMFNSTKPTSYSFAVDWWSLGVTAYELLRTRRPYHIRSNTSADDIAHVFKTATVMYPAAWSPDMVSLIKKLLELNPEKRFSQLKDIQSFPYLSDVNWDAVLQKRVMPEFIPMKGRLNCDPAFELEEMILESKPLHKKKKRLAKKEKDTSKSNSSQASHLQKHLEMLQRDFIVFNREKVRPHHDSIQETMTKSGGTHREDNQNNHL
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(551394..551481,551753..551817,552163..552291,553226..553351,555072..555188,557005..557102,558350..558439,563380..563417,565990..566163,566984..567135,568135..568190,572044..572095))
location: region:551394-572095:-1
so has part: feature:572044-572095:-1:exon
so has part: feature:568135-568190:-1:exon
so has part: feature:566984-567135:-1:exon
so has part: feature:565990-566163:-1:exon
so has part: feature:563380-563417:-1:exon
so has part: feature:558350-558439:-1:exon
so has part: feature:557005-557102:-1:exon
so has part: feature:555072-555188:-1:exon
so has part: feature:553226-553351:-1:exon
so has part: feature:552163-552291:-1:exon
so has part: feature:551753-551817:-1:exon
so has part: feature:551394-551481:-1:exon

XP_039415880.1
type: Protein
SIO_000068: ncbiprotein

position:551394:-1
position: 551394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572095:-1
position: 572095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572044-572095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568135-568190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566984-567135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565990-566163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563380-563417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558350-558439:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557005-557102:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555072-555188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553226-553351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552163-552291:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551753-551817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:551394-551481:-1:exon

PPP2R2B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 580284..648060
location: region:580284-648060:1
so has part: feature:580284-648060:1:exon
subclass of: SO_0000010

104689468
type: Gene
SIO_000068: ncbigene

position:580284:1
position: 580284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648060:1
position: 648060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580284-648060:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_039559809.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(580284..580385,580519..580596,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..648060)
location: region:580284-648060:1
so has part: feature:580284-580385:1:exon
so has part: feature:580519-580596:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-648060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580284-580385:1:exon

position:580385:1
position: 580385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580519-580596:1:exon

position:580519:1
position: 580519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580596:1
position: 580596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632435-632532:1:exon

position:632435:1
position: 632435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632532:1
position: 632532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633827-633992:1:exon

position:633827:1
position: 633827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633992:1
position: 633992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635331-635443:1:exon

position:635331:1
position: 635331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635443:1
position: 635443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:641403-641580:1:exon

position:641403:1
position: 641403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641580:1
position: 641580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642837-643001:1:exon

position:642837:1
position: 642837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643001:1
position: 643001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644793-644962:1:exon

position:644793:1
position: 644793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644962:1
position: 644962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:645504-645595:1:exon

position:645504:1
position: 645504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645595:1
position: 645595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:646116-648060:1:exon

position:646116:1
position: 646116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
translation: MTPGFGSLMQDVLWCFSQVKGTIDTGVTEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(580376..580385,580519..580596,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..646395)
location: region:580376-646395:1
so has part: feature:580376-580385:1:exon
so has part: feature:580519-580596:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-646395:1:exon

XP_039415743.1
type: Protein
SIO_000068: ncbiprotein

position:580376:1
position: 580376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646395:1
position: 646395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580376-580385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580519-580596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632435-632532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633827-633992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635331-635443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:641403-641580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642837-643001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644793-644962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:645504-645595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:646116-646395:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039559810.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(582904..583054,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..648060)
location: region:582904-648060:1
so has part: feature:582904-583054:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-648060:1:exon

position:582904:1
position: 582904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582904-583054:1:exon

position:583054:1
position: 583054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632435-632532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633827-633992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635331-635443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641403-641580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642837-643001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644793-644962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:645504-645595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646116-648060:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
translation: MKCFSRYLPYLFRPHGALRSASCHAEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(582976..583054,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..646395)
location: region:582976-646395:1
so has part: feature:582976-583054:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-646395:1:exon

XP_039415744.1
type: Protein
SIO_000068: ncbiprotein

position:582976:1
position: 582976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582976-583054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632435-632532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633827-633992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635331-635443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641403-641580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642837-643001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644793-644962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:645504-645595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646116-646395:1:exon

LOC104689467
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584912..589679
location: region:584912-589679:1
so has part: feature:584912-589679:1:exon
subclass of: SO_0000011

104689467
type: Gene
SIO_000068: ncbigene

position:584912:1
position: 584912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589679:1
position: 589679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584912-589679:1:exon

LOC104689467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689467
product: uncharacterized LOC104689467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005603077.1
SIO_010081: LOC104689467
subclass of: SO_0000673
so part of: LOC104689467
location: join(584912..586534,588453..589679)
location: region:584912-589679:1
so has part: feature:584912-586534:1:exon
so has part: feature:588453-589679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584912-586534:1:exon

position:586534:1
position: 586534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588453-589679:1:exon

position:588453:1
position: 588453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_039559811.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(602715..602895,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..648060)
location: region:602715-648060:1
so has part: feature:602715-602895:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-648060:1:exon

position:602715:1
position: 602715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602715-602895:1:exon

position:602895:1
position: 602895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632435-632532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633827-633992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635331-635443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641403-641580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642837-643001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644793-644962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:645504-645595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646116-648060:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
translation: MEEDAETRKISSSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(602826..602895,632435..632532,633827..633992,635331..635443,641403..641580,642837..643001,644793..644962,645504..645595,646116..646395)
location: region:602826-646395:1
so has part: feature:602826-602895:1:exon
so has part: feature:632435-632532:1:exon
so has part: feature:633827-633992:1:exon
so has part: feature:635331-635443:1:exon
so has part: feature:641403-641580:1:exon
so has part: feature:642837-643001:1:exon
so has part: feature:644793-644962:1:exon
so has part: feature:645504-645595:1:exon
so has part: feature:646116-646395:1:exon

XP_039415745.1
type: Protein
SIO_000068: ncbiprotein

position:602826:1
position: 602826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602826-602895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632435-632532:1:exon

urn:…
SIO_000300: 3
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TCERG1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(648828..679450)
location: region:648828-679450:-1
so has part: feature:648828-679450:-1:exon
subclass of: SO_0000010

104689469
type: Gene
SIO_000068: ncbigene

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position: 648828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679450:-1
position: 679450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648828-679450:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_039559808.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
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location: region:648828-679450:-1
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SIO_000300: 18
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SIO_000300: 19
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reference: sequence
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TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_039559807.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(648828..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,668737..668799,675237..675474,675626..675778,678252..678477,679371..679450))
location: region:648828-679450:-1
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urn:…
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SIO_000300: 5
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SIO_000300: 7
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 19
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:648828-650002:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_039559805.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(648828..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,672408..672650,675237..675474,675626..675778,678252..678477,679371..679450))
location: region:648828-679450:-1
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SIO_000300: 5
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position: 672408
reference: sequence
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TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_039559804.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(648828..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664782,665894..666009,667280..667480,668737..668799,672408..672650,675237..675474,675626..675778,678252..678477,679371..679450))
location: region:648828-679450:-1
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TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_039559803.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
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location: region:648828-679450:-1
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so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:648828-650002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672408-672650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668737-668799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664697-664785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:648828-650002:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X5
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSRVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(649801..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,675237..675474,675626..675778,678252..678477,679371..679441))
location: region:649801-679441:-1
so has part: feature:679371-679441:-1:exon
so has part: feature:678252-678477:-1:exon
so has part: feature:675626-675778:-1:exon
so has part: feature:675237-675474:-1:exon
so has part: feature:667280-667480:-1:exon
so has part: feature:665894-666009:-1:exon
so has part: feature:664697-664785:-1:exon
so has part: feature:663547-663707:-1:exon
so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:649801-650002:-1:exon

XP_039415742.1
type: Protein
SIO_000068: ncbiprotein

position:649801:-1
position: 649801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679441:-1
position: 679441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664697-664785:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:649801-650002:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X4
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSSVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(649801..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,668737..668799,675237..675474,675626..675778,678252..678477,679371..679441))
location: region:649801-679441:-1
so has part: feature:679371-679441:-1:exon
so has part: feature:678252-678477:-1:exon
so has part: feature:675626-675778:-1:exon
so has part: feature:675237-675474:-1:exon
so has part: feature:668737-668799:-1:exon
so has part: feature:667280-667480:-1:exon
so has part: feature:665894-666009:-1:exon
so has part: feature:664697-664785:-1:exon
so has part: feature:663547-663707:-1:exon
so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:649801-650002:-1:exon

XP_039415741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668737-668799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664697-664785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:649801-650002:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X3
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(649801..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,672408..672650,675237..675474,675626..675778,678252..678477,679371..679441))
location: region:649801-679441:-1
so has part: feature:679371-679441:-1:exon
so has part: feature:678252-678477:-1:exon
so has part: feature:675626-675778:-1:exon
so has part: feature:675237-675474:-1:exon
so has part: feature:672408-672650:-1:exon
so has part: feature:667280-667480:-1:exon
so has part: feature:665894-666009:-1:exon
so has part: feature:664697-664785:-1:exon
so has part: feature:663547-663707:-1:exon
so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:649801-650002:-1:exon

XP_039415739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672408-672650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664697-664785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:649801-650002:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X2
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(649801..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664782,665894..666009,667280..667480,668737..668799,672408..672650,675237..675474,675626..675778,678252..678477,679371..679441))
location: region:649801-679441:-1
so has part: feature:679371-679441:-1:exon
so has part: feature:678252-678477:-1:exon
so has part: feature:675626-675778:-1:exon
so has part: feature:675237-675474:-1:exon
so has part: feature:672408-672650:-1:exon
so has part: feature:668737-668799:-1:exon
so has part: feature:667280-667480:-1:exon
so has part: feature:665894-666009:-1:exon
so has part: feature:664697-664782:-1:exon
so has part: feature:663547-663707:-1:exon
so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:649801-650002:-1:exon

XP_039415738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672408-672650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668737-668799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664697-664782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:649801-650002:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X1
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(649801..650002,650383..650483,650739..650822,651677..651856,652437..652619,653351..653515,657675..657825,659786..659904,660626..660715,661544..661679,662707..662773,663547..663707,664697..664785,665894..666009,667280..667480,668737..668799,672408..672650,675237..675474,675626..675778,678252..678477,679371..679441))
location: region:649801-679441:-1
so has part: feature:679371-679441:-1:exon
so has part: feature:678252-678477:-1:exon
so has part: feature:675626-675778:-1:exon
so has part: feature:675237-675474:-1:exon
so has part: feature:672408-672650:-1:exon
so has part: feature:668737-668799:-1:exon
so has part: feature:667280-667480:-1:exon
so has part: feature:665894-666009:-1:exon
so has part: feature:664697-664785:-1:exon
so has part: feature:663547-663707:-1:exon
so has part: feature:662707-662773:-1:exon
so has part: feature:661544-661679:-1:exon
so has part: feature:660626-660715:-1:exon
so has part: feature:659786-659904:-1:exon
so has part: feature:657675-657825:-1:exon
so has part: feature:653351-653515:-1:exon
so has part: feature:652437-652619:-1:exon
so has part: feature:651677-651856:-1:exon
so has part: feature:650739-650822:-1:exon
so has part: feature:650383-650483:-1:exon
so has part: feature:649801-650002:-1:exon

XP_039415737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679371-679441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678252-678477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675626-675778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675237-675474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672408-672650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668737-668799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667280-667480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665894-666009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664697-664785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663547-663707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662707-662773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661544-661679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660626-660715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:659786-659904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657675-657825:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:653351-653515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:652437-652619:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:651677-651856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650739-650822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:650383-650483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:649801-650002:-1:exon

POU4F3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690879..692279)
location: region:690879-692279:-1
so has part: feature:690879-692279:-1:exon
subclass of: SO_0000010

120410725
type: Gene
SIO_000068: ncbigene

position:690879:-1
position: 690879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692279:-1
position: 692279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690879-692279:-1:exon

POU4F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: POU4F3
product: POU class 4 homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039559634.1
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(690879..691823,692072..692279))
location: region:690879-692279:-1
so has part: feature:692072-692279:-1:exon
so has part: feature:690879-691823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692072-692279:-1:exon

position:692072:-1
position: 692072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690879-691823:-1:exon

position:691823:-1
position: 691823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU4F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 3
translation: MMAMDAKQPFAVPAALQDPKFPSLHAGAEAMRRVCLPAPQLQGNIFGSFDESLLARAEALAAADIAPHAKAHHLHPHFKPDAAFHAMSGVPCAAAALPHPAALTAHPHPLPHPALDGGDLLEHLSPSLAVAGLAEPPALPAPLPPPPLPGAAAGPLPVPVGAPGGPAPAADPRELEAFAERFKQRRVRLGVTQADVGAALAALKLPGVGSLSQSTICRFESLTLSHNNMTALRPVLQAWLEGAEAARRARPAGPDPPPGAERKRRRTSIAAPERRSLEAYFALQPRPSAEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(690963..691823,692072..692191))
location: region:690963-692191:-1
so has part: feature:692072-692191:-1:exon
so has part: feature:690963-691823:-1:exon

XP_039415568.1
type: Protein
SIO_000068: ncbiprotein

position:690963:-1
position: 690963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692191:-1
position: 692191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692072-692191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690963-691823:-1:exon

RBM27
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699265..722105)
location: region:699265-722105:-1
so has part: feature:699265-722105:-1:exon
subclass of: SO_0000010

104689629
type: Gene
SIO_000068: ncbigene

position:699265:-1
position: 699265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722105:-1
position: 722105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699265-722105:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RBM27
product: RNA binding motif protein 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039559632.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(699265..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,710340..710489,712456..712590,713707..713940,714504..714767,715568..715758,716330..716436,718208..718332,719133..719251,721972..722105))
location: region:699265-722105:-1
so has part: feature:721972-722105:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:710340-710489:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:699265-702201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722105:-1:exon

position:721972:-1
position: 721972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

position:719133:-1
position: 719133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719251:-1
position: 719251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

position:718208:-1
position: 718208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718332:-1
position: 718332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

position:716330:-1
position: 716330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716436:-1
position: 716436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

position:715568:-1
position: 715568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715758:-1
position: 715758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714504-714767:-1:exon

position:714504:-1
position: 714504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714767:-1
position: 714767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713707-713940:-1:exon

position:713707:-1
position: 713707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713940:-1
position: 713940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712456-712590:-1:exon

position:712456:-1
position: 712456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712590:-1
position: 712590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:710340-710489:-1:exon

position:710340:-1
position: 710340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710489:-1
position: 710489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:708404-708551:-1:exon

position:708404:-1
position: 708404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708551:-1
position: 708551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:707968-708121:-1:exon

position:707968:-1
position: 707968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708121:-1
position: 708121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706565-706816:-1:exon

position:706565:-1
position: 706565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706816:-1
position: 706816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:706337-706465:-1:exon

position:706337:-1
position: 706337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706465:-1
position: 706465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:705394-705516:-1:exon

position:705394:-1
position: 705394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705516:-1
position: 705516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:704818-704892:-1:exon

position:704818:-1
position: 704818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704892:-1
position: 704892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:704545-704709:-1:exon

position:704545:-1
position: 704545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704709:-1
position: 704709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:704024-704128:-1:exon

position:704024:-1
position: 704024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704128:-1
position: 704128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:703739-703930:-1:exon

position:703739:-1
position: 703739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703930:-1
position: 703930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:703387-703473:-1:exon

position:703387:-1
position: 703387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703473:-1
position: 703473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:702810-702920:-1:exon

position:702810:-1
position: 702810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702920:-1
position: 702920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:699265-702201:-1:exon

position:702201:-1
position: 702201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RBM27
product: RNA binding motif protein 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039559633.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(699265..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,712456..712590,713707..713940,714504..714767,715070..715153,715568..715758,716330..716436,718208..718332,719133..719251,721972..722105))
location: region:699265-722105:-1
so has part: feature:721972-722105:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:715070-715153:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:699265-702201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715070-715153:-1:exon

position:715070:-1
position: 715070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715153:-1
position: 715153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:714504-714767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713707-713940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712456-712590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708404-708551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707968-708121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706565-706816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706337-706465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:705394-705516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:704818-704892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704545-704709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:704024-704128:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:703739-703930:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:703387-703473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:702810-702920:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:699265-702201:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RBM27
product: RNA binding motif protein 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039559631.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(699265..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,710340..710489,712456..712590,713707..713940,714504..714767,715070..715153,715568..715758,716330..716436,718208..718332,719133..719251,721972..722105))
location: region:699265-722105:-1
so has part: feature:721972-722105:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:715070-715153:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:710340-710489:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:699265-702201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715070-715153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714504-714767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713707-713940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712456-712590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710340-710489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708404-708551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:707968-708121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706565-706816:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706337-706465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705394-705516:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704818-704892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:704545-704709:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704024-704128:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:703739-703930:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:703387-703473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702810-702920:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:699265-702201:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X2
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSEHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPVRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQMQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTAPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(702115..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,710340..710489,712456..712590,713707..713940,714504..714767,715568..715758,716330..716436,718208..718332,719133..719251,721972..722030))
location: region:702115-722030:-1
so has part: feature:721972-722030:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:710340-710489:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:702115-702201:-1:exon

XP_039415566.1
type: Protein
SIO_000068: ncbiprotein

position:702115:-1
position: 702115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722030:-1
position: 722030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714504-714767:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713707-713940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712456-712590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:710340-710489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708404-708551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707968-708121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706565-706816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706337-706465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:705394-705516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:704818-704892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704545-704709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:704024-704128:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:703739-703930:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:703387-703473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:702810-702920:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702115-702201:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X3
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSGLVQVCRKSKWHRLQHSTHLETALVKGREHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPVRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTAPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(702115..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,712456..712590,713707..713940,714504..714767,715070..715153,715568..715758,716330..716436,718208..718332,719133..719251,721972..722030))
location: region:702115-722030:-1
so has part: feature:721972-722030:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:715070-715153:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:702115-702201:-1:exon

XP_039415567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715070-715153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714504-714767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713707-713940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712456-712590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708404-708551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707968-708121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706565-706816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706337-706465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:705394-705516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:704818-704892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704545-704709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:704024-704128:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:703739-703930:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:703387-703473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:702810-702920:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702115-702201:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X1
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSGLVQVCRKSKWHRLQHSTHLETALVKGREHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPVRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQMQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTAPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(702115..702201,702810..702920,703387..703473,703739..703930,704024..704128,704545..704709,704818..704892,705394..705516,706337..706465,706565..706816,707968..708121,708404..708551,710340..710489,712456..712590,713707..713940,714504..714767,715070..715153,715568..715758,716330..716436,718208..718332,719133..719251,721972..722030))
location: region:702115-722030:-1
so has part: feature:721972-722030:-1:exon
so has part: feature:719133-719251:-1:exon
so has part: feature:718208-718332:-1:exon
so has part: feature:716330-716436:-1:exon
so has part: feature:715568-715758:-1:exon
so has part: feature:715070-715153:-1:exon
so has part: feature:714504-714767:-1:exon
so has part: feature:713707-713940:-1:exon
so has part: feature:712456-712590:-1:exon
so has part: feature:710340-710489:-1:exon
so has part: feature:708404-708551:-1:exon
so has part: feature:707968-708121:-1:exon
so has part: feature:706565-706816:-1:exon
so has part: feature:706337-706465:-1:exon
so has part: feature:705394-705516:-1:exon
so has part: feature:704818-704892:-1:exon
so has part: feature:704545-704709:-1:exon
so has part: feature:704024-704128:-1:exon
so has part: feature:703739-703930:-1:exon
so has part: feature:703387-703473:-1:exon
so has part: feature:702810-702920:-1:exon
so has part: feature:702115-702201:-1:exon

XP_039415565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721972-722030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719133-719251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718208-718332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716330-716436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715568-715758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715070-715153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714504-714767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713707-713940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712456-712590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710340-710489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708404-708551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:707968-708121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706565-706816:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706337-706465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705394-705516:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704818-704892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:704545-704709:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704024-704128:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:703739-703930:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:703387-703473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702810-702920:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:702115-702201:-1:exon

LARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 722315..748410
location: region:722315-748410:1
so has part: feature:722315-748410:1:exon
subclass of: SO_0000010

104689630
type: Gene
SIO_000068: ncbigene

position:722315:1
position: 722315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748410:1
position: 748410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722315-748410:1:exon

LARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LARS1
product: leucyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_039559447.1
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(722315..722531,723444..723562,725473..725560,726189..726269,726710..726850,727240..727401,728068..728180,728577..728640,729175..729242,729634..729859,730934..731021,731110..731186,731834..731887,732564..732704,733448..733525,734446..734531,734622..734687,734781..734863,735491..735629,737652..737864,738724..738781,739509..739572,740176..740359,740576..740666,741510..741650,742202..742342,742424..742534,743379..743489,745512..745616,746746..746841,747213..747345,748025..748410)
location: region:722315-748410:1
so has part: feature:722315-722531:1:exon
so has part: feature:723444-723562:1:exon
so has part: feature:725473-725560:1:exon
so has part: feature:726189-726269:1:exon
so has part: feature:726710-726850:1:exon
so has part: feature:727240-727401:1:exon
so has part: feature:728068-728180:1:exon
so has part: feature:728577-728640:1:exon
so has part: feature:729175-729242:1:exon
so has part: feature:729634-729859:1:exon
so has part: feature:730934-731021:1:exon
so has part: feature:731110-731186:1:exon
so has part: feature:731834-731887:1:exon
so has part: feature:732564-732704:1:exon
so has part: feature:733448-733525:1:exon
so has part: feature:734446-734531:1:exon
so has part: feature:734622-734687:1:exon
so has part: feature:734781-734863:1:exon
so has part: feature:735491-735629:1:exon
so has part: feature:737652-737864:1:exon
so has part: feature:738724-738781:1:exon
so has part: feature:739509-739572:1:exon
so has part: feature:740176-740359:1:exon
so has part: feature:740576-740666:1:exon
so has part: feature:741510-741650:1:exon
so has part: feature:742202-742342:1:exon
so has part: feature:742424-742534:1:exon
so has part: feature:743379-743489:1:exon
so has part: feature:745512-745616:1:exon
so has part: feature:746746-746841:1:exon
so has part: feature:747213-747345:1:exon
so has part: feature:748025-748410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722315-722531:1:exon

position:722531:1
position: 722531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723444-723562:1:exon

position:723444:1
position: 723444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723562:1
position: 723562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725473-725560:1:exon

position:725473:1
position: 725473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725560:1
position: 725560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:726189-726269:1:exon

position:726189:1
position: 726189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726269:1
position: 726269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:726710-726850:1:exon

position:726710:1
position: 726710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726850:1
position: 726850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727240-727401:1:exon

position:727240:1
position: 727240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727401:1
position: 727401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:728068-728180:1:exon

position:728068:1
position: 728068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728180:1
position: 728180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728577-728640:1:exon

position:728577:1
position: 728577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728640:1
position: 728640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:729175-729242:1:exon

position:729175:1
position: 729175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729242:1
position: 729242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:729634-729859:1:exon

position:729634:1
position: 729634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729859:1
position: 729859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:730934-731021:1:exon

position:730934:1
position: 730934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731021:1
position: 731021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:731110-731186:1:exon

position:731110:1
position: 731110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731186:1
position: 731186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:731834-731887:1:exon

position:731834:1
position: 731834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731887:1
position: 731887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:732564-732704:1:exon

position:732564:1
position: 732564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732704:1
position: 732704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:733448-733525:1:exon

position:733448:1
position: 733448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733525:1
position: 733525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:734446-734531:1:exon

position:734446:1
position: 734446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734531:1
position: 734531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:734622-734687:1:exon

position:734622:1
position: 734622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734687:1
position: 734687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:734781-734863:1:exon

position:734781:1
position: 734781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734863:1
position: 734863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:735491-735629:1:exon

position:735491:1
position: 735491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735629:1
position: 735629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:737652-737864:1:exon

position:737652:1
position: 737652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737864:1
position: 737864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:738724-738781:1:exon

position:738724:1
position: 738724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738781:1
position: 738781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:739509-739572:1:exon

position:739509:1
position: 739509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739572:1
position: 739572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:740176-740359:1:exon

position:740176:1
position: 740176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740359:1
position: 740359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:740576-740666:1:exon

position:740576:1
position: 740576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740666:1
position: 740666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:741510-741650:1:exon

position:741510:1
position: 741510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741650:1
position: 741650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:742202-742342:1:exon

position:742202:1
position: 742202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742342:1
position: 742342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:742424-742534:1:exon

position:742424:1
position: 742424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742534:1
position: 742534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:743379-743489:1:exon

position:743379:1
position: 743379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743489:1
position: 743489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:745512-745616:1:exon

position:745512:1
position: 745512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745616:1
position: 745616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:746746-746841:1:exon

position:746746:1
position: 746746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746841:1
position: 746841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:747213-747345:1:exon

position:747213:1
position: 747213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747345:1
position: 747345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:748025-748410:1:exon

position:748025:1
position: 748025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, cytoplasmic
translation: MAERKGTAKVDFLKKIEREIQQKWDHDRVFEINAADRRDQRSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQRLKGRSCLFPFGLHCTGMPIKACADKLKREMELYGCPPEFPDEEEEEEENSGKKEEEIIIKDKAKGKKSKAAAKTGSSKYQWGIMKSLGLSDEEVVSFSEAEHWLDYFPPLAVQDLKSMGLKVDWRRSFITTNVNPYYDSFVRWQFLTLKERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVLDPYPAKLSGLRGKNIFLVAATLRPETMFGQTNCWLRPDMKYIGFETGNGDIFICTQRAARNMSYQGFTKDNGVVPVVKELMGEEILGAALSAPLTTYKVIYALPMLTIKEDKGTGVVTSVPSDSPDDFAALRDLKKKQALRVKYGIRDEMVLPFEPVPIIEIPGYGSLCAPFVCDELKIQSQNDREKLAEAKERVYLKGFYEGVMLVDEFKGQKVQDVKKRIQKLMLDKGEAMIYMEPEKQVISRSADECVVALCDQWYLDYGEVSWKKQASECLKHLETFCEETRRNFEATLGWLQEHACSRTYGLGSRLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGNLRGQGESPLGIRAHQMSKEVWDYIFFKTAPFPKTEIPKEKLDKLKEEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWSEQREKWPVAVRANGHLLLNSEKMSKSTGNFLTLTQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMIANRDSLRSGPASTFNDRVFASEMNAGIMKTDQNYEKMMFKEALKTGFFEFQAAKDKYRELAIEGMHRELVFQFIEVQTLLLAPICPHLCEHIWSLLGKPDSIMRASWPAAGPMDEVLIRSSQYLMEAAHDLRLRLKSYMAPVKGKKSAKEPSQKPSHCTIYVAKNYPPWQHTTLSILRKHFQASGGQLPDNKVIASELNTLPELKKYMKKVMPFVAMVKENLEKSGSRVLDLELEFDERAVLMENIVYLTNSLELDHIEVKFASEAEDKIKEDCCPGKPFSIFRTEPGVSVFLVNPQPSNGHFSTKMDIRQGDNRETVIRRLMKMDRGIKDLSKVKLMRFDDPVLGPRRVPVLGKEEAGKTPILEQAIFHIDLAQRHVCVTENGLTRDIGDTIVYLVH
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(722526..722531,723444..723562,725473..725560,726189..726269,726710..726850,727240..727401,728068..728180,728577..728640,729175..729242,729634..729859,730934..731021,731110..731186,731834..731887,732564..732704,733448..733525,734446..734531,734622..734687,734781..734863,735491..735629,737652..737864,738724..738781,739509..739572,740176..740359,740576..740666,741510..741650,742202..742342,742424..742534,743379..743489,745512..745616,746746..746841,747213..747345,748025..748230)
location: region:722526-748230:1
so has part: feature:722526-722531:1:exon
so has part: feature:723444-723562:1:exon
so has part: feature:725473-725560:1:exon
so has part: feature:726189-726269:1:exon
so has part: feature:726710-726850:1:exon
so has part: feature:727240-727401:1:exon
so has part: feature:728068-728180:1:exon
so has part: feature:728577-728640:1:exon
so has part: feature:729175-729242:1:exon
so has part: feature:729634-729859:1:exon
so has part: feature:730934-731021:1:exon
so has part: feature:731110-731186:1:exon
so has part: feature:731834-731887:1:exon
so has part: feature:732564-732704:1:exon
so has part: feature:733448-733525:1:exon
so has part: feature:734446-734531:1:exon
so has part: feature:734622-734687:1:exon
so has part: feature:734781-734863:1:exon
so has part: feature:735491-735629:1:exon
so has part: feature:737652-737864:1:exon
so has part: feature:738724-738781:1:exon
so has part: feature:739509-739572:1:exon
so has part: feature:740176-740359:1:exon
so has part: feature:740576-740666:1:exon
so has part: feature:741510-741650:1:exon
so has part: feature:742202-742342:1:exon
so has part: feature:742424-742534:1:exon
so has part: feature:743379-743489:1:exon
so has part: feature:745512-745616:1:exon
so has part: feature:746746-746841:1:exon
so has part: feature:747213-747345:1:exon
so has part: feature:748025-748230:1:exon

XP_039415381.1
type: Protein
SIO_000068: ncbiprotein

position:722526:1
position: 722526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748230:1
position: 748230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722526-722531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723444-723562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725473-725560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726189-726269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726710-726850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727240-727401:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:728068-728180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728577-728640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729175-729242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:729634-729859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:730934-731021:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731110-731186:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:731834-731887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732564-732704:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:733448-733525:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734446-734531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734622-734687:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:734781-734863:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:735491-735629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:737652-737864:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:738724-738781:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:739509-739572:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:740176-740359:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:740576-740666:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:741510-741650:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:742202-742342:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:742424-742534:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:743379-743489:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:745512-745616:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:746746-746841:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:747213-747345:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:748025-748230:1:exon

SH3RF2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(750208..775955)
location: region:750208-775955:-1
so has part: feature:750208-775955:-1:exon
subclass of: SO_0000010

104689631
type: Gene
SIO_000068: ncbigene

position:750208:-1
position: 750208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775955:-1
position: 775955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750208-775955:-1:exon

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SH3RF2
product: SH3 domain containing ring finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039559448.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(750208..754343,755229..755590,756048..756262,756446..756616,758576..758670,761811..762134,763880..764137,774822..775955))
location: region:750208-775955:-1
so has part: feature:774822-775955:-1:exon
so has part: feature:763880-764137:-1:exon
so has part: feature:761811-762134:-1:exon
so has part: feature:758576-758670:-1:exon
so has part: feature:756446-756616:-1:exon
so has part: feature:756048-756262:-1:exon
so has part: feature:755229-755590:-1:exon
so has part: feature:750208-754343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774822-775955:-1:exon

position:774822:-1
position: 774822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763880-764137:-1:exon

position:763880:-1
position: 763880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764137:-1
position: 764137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761811-762134:-1:exon

position:761811:-1
position: 761811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762134:-1
position: 762134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:758576-758670:-1:exon

position:758576:-1
position: 758576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758670:-1
position: 758670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:756446-756616:-1:exon

position:756446:-1
position: 756446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756616:-1
position: 756616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756048-756262:-1:exon

position:756048:-1
position: 756048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756262:-1
position: 756262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:755229-755590:-1:exon

position:755229:-1
position: 755229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755590:-1
position: 755590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750208-754343:-1:exon

position:754343:-1
position: 754343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCSIEQLPSNLLLIRLLDGVRCGQNVTRFGSIQRSGVLSSPASIRRVPRGLQLHQHRLATNPRIHMEGVPRARALYTYRGHSPGELRFNKGDTIVLLRQLDENWYLGEANGTSGVFPASSVQVIKHLPLPRPLYGLDLRSRDKAENKDSLTFHKPSTPTQQLLQATKSHWSPQFKGASLRTASPKAKAADSVAFPKVPDSRRKSLRQFSITTALNTLNRMVHAPADRPALEISSPVLISSSNPTVATQSSEKAEFPYGTPLQVSTSYYPTPAPLGPPAAIVTLPHLQHHGPAYLCVALHSYAAHGPDELELQKGEGVRVFGKDQDGWLRGMSLATGRVGLFPSNYVAPLFRKSSLSDSKMPSLYTSWTLSTSSLSSQGSMSENGPRQSRALKPVLLPVPIPSPGRSAAGPAPLRRGRGSTRKNGSLQRPGQAGTPVQITGSLRRPSAAGRPQHFQLYPHVSSPPHSISPGAGMDEATRPNFSHEASPALLVRGGESRTPSVCSSVILDVKDPPVKSEAAPKPPASAPPSILVKPETSRNSAEKQVKTVRFQNHSPPPPKRHSLQPSPSLLRSRTEPGPEGLLPEAGLGPELLVLYSPRLGSSPLHPRRALHPKALSLDLSGQLTFPIKKSYSSISAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(754059..754343,755229..755590,756048..756262,756446..756616,758576..758670,761811..762134,763880..764137,774822..775193))
location: region:754059-775193:-1
so has part: feature:774822-775193:-1:exon
so has part: feature:763880-764137:-1:exon
so has part: feature:761811-762134:-1:exon
so has part: feature:758576-758670:-1:exon
so has part: feature:756446-756616:-1:exon
so has part: feature:756048-756262:-1:exon
so has part: feature:755229-755590:-1:exon
so has part: feature:754059-754343:-1:exon

XP_039415382.1
type: Protein
SIO_000068: ncbiprotein

position:754059:-1
position: 754059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775193:-1
position: 775193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774822-775193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763880-764137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761811-762134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:758576-758670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756446-756616:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756048-756262:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:755229-755590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754059-754343:-1:exon

GRXCR2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 785516..791052
location: region:785516-791052:1
so has part: feature:785516-791052:1:exon
subclass of: SO_0000010

104689632
type: Gene
SIO_000068: ncbigene

position:785516:1
position: 785516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791052:1
position: 791052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785516-791052:1:exon

GRXCR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GRXCR2
product: glutaredoxin and cysteine rich domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010399860.4
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(785516..785896,787385..787600,788608..791052)
location: region:785516-791052:1
so has part: feature:785516-785896:1:exon
so has part: feature:787385-787600:1:exon
so has part: feature:788608-791052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785516-785896:1:exon

position:785896:1
position: 785896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787385-787600:1:exon

position:787385:1
position: 787385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787600:1
position: 787600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788608-791052:1:exon

position:788608:1
position: 788608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRXCR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin domain-containing cysteine-rich protein 2
translation: MDEPQKKLSQRHEGRPRKVRFKISSAYSGRVLKQVYEDGQELEPPAKEHSRRFLRQSFEPGDHFCGAGEVPENRFYWPTALTAQRISILREDQKHGLAGTSPLLSDCQPDASHCRTSPVVDFGKIIIYTNNLKIIRAPMDQKELMRRIIQTEGINDWTFMCQERKERFSGGHKKDVENKVTCIQHVQEGHAEHGCSQCKGSGCAPCSLCHGSKFSMLANRFRESYRALRCPACNESGLQPCRICAA
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(785552..785896,787385..787600,788608..788787)
location: region:785552-788787:1
so has part: feature:785552-785896:1:exon
so has part: feature:787385-787600:1:exon
so has part: feature:788608-788787:1:exon

XP_010398162.1
type: Protein
SIO_000068: ncbiprotein

position:785552:1
position: 785552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788787:1
position: 788787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785552-785896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787385-787600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788608-788787:1:exon

LOC109950901
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109950901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833017..861452
location: region:833017-861452:1
so has part: feature:833017-861452:1:exon
subclass of: SO_0000011

109950901
type: Gene
SIO_000068: ncbigene

position:833017:1
position: 833017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861452:1
position: 861452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833017-861452:1:exon

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002273121.2
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(833017..833399,841321..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,856879..861452)
location: region:833017-861452:1
so has part: feature:833017-833399:1:exon
so has part: feature:841321-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833017-833399:1:exon

position:833399:1
position: 833399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841321-841550:1:exon

position:841321:1
position: 841321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841550:1
position: 841550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842078-842135:1:exon

position:842078:1
position: 842078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842135:1
position: 842135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:844391-844500:1:exon

position:844391:1
position: 844391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844500:1
position: 844500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:846368-846596:1:exon

position:846368:1
position: 846368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846596:1
position: 846596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847434-847563:1:exon

position:847434:1
position: 847434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847563:1
position: 847563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:848760-848938:1:exon

position:848760:1
position: 848760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848938:1
position: 848938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854204-854395:1:exon

position:854204:1
position: 854204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854395:1
position: 854395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:856879-861452:1:exon

position:856879:1
position: 856879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005603082.1
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840503..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,851183..851390,854204..854395,856879..861452)
location: region:840503-861452:1
so has part: feature:840503-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:851183-851390:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

position:840503:1
position: 840503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840503-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851183-851390:1:exon

position:851183:1
position: 851183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851390:1
position: 851390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856879-861452:1:exon

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005603083.1
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840503..841550,842078..842135,844391..844500,846627..846824,847434..847563,848760..848938,854204..854395,856879..861452)
location: region:840503-861452:1
so has part: feature:840503-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846627-846824:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840503-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846627-846824:1:exon

position:846627:1
position: 846627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846824:1
position: 846824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856879-861452:1:exon

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002273124.2
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840504..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,856879..857541,857628..861452)
location: region:840504-861452:1
so has part: feature:840504-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-857541:1:exon
so has part: feature:857628-861452:1:exon

position:840504:1
position: 840504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840504-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856879-857541:1:exon

position:857541:1
position: 857541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:857628-861452:1:exon

position:857628:1
position: 857628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002273122.2
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840504..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,856879..857541,857676..861452)
location: region:840504-861452:1
so has part: feature:840504-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-857541:1:exon
so has part: feature:857676-861452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840504-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856879-857541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:857676-861452:1:exon

position:857676:1
position: 857676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005603081.1
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840505..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,856879..861452)
location: region:840505-861452:1
so has part: feature:840505-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

position:840505:1
position: 840505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840505-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856879-861452:1:exon

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002273123.2
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840505..841550,842078..842135,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,857311..861452)
location: region:840505-861452:1
so has part: feature:840505-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:857311-861452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840505-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857311-861452:1:exon

position:857311:1
position: 857311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005603084.1
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840505..841550,842078..842135,844391..844500,847434..847563,848760..848938,854204..854395,856879..861452)
location: region:840505-861452:1
so has part: feature:840505-841550:1:exon
so has part: feature:842078-842135:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840505-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842078-842135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856879-861452:1:exon

LOC109950901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109950901
product: uncharacterized LOC109950901, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002273120.2
SIO_010081: LOC109950901
subclass of: SO_0000673
so part of: LOC109950901
location: join(840507..841550,844391..844500,846368..846596,847434..847563,848760..848938,854204..854395,856879..861452)
location: region:840507-861452:1
so has part: feature:840507-841550:1:exon
so has part: feature:844391-844500:1:exon
so has part: feature:846368-846596:1:exon
so has part: feature:847434-847563:1:exon
so has part: feature:848760-848938:1:exon
so has part: feature:854204-854395:1:exon
so has part: feature:856879-861452:1:exon

position:840507:1
position: 840507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840507-841550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844391-844500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846368-846596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847434-847563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848760-848938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854204-854395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856879-861452:1:exon

LOC109144601
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109144601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 918338..920936
location: region:918338-920936:1
so has part: feature:918338-920936:1:exon
subclass of: SO_0000011

109144601
type: Gene
SIO_000068: ncbigene

position:918338:1
position: 918338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920936:1
position: 920936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918338-920936:1:exon

LOC109144601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109144601
product: uncharacterized LOC109144601
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002045466.2
SIO_010081: LOC109144601
subclass of: SO_0000673
so part of: LOC109144601
location: join(918338..918442,919355..919446,919709..920936)
location: region:918338-920936:1
so has part: feature:918338-918442:1:exon
so has part: feature:919355-919446:1:exon
so has part: feature:919709-920936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:918338-918442:1:exon

position:918442:1
position: 918442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919355-919446:1:exon

position:919355:1
position: 919355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919446:1
position: 919446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919709-920936:1:exon

position:919709:1
position: 919709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD16
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(949490..1011838)
location: region:949490-1011838:-1
so has part: feature:949490-1011838:-1:exon
subclass of: SO_0000010

104689471
type: Gene
SIO_000068: ncbigene

position:949490:-1
position: 949490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011838:-1
position: 1011838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949490-1011838:-1:exon

KCTD16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KCTD16
product: potassium channel tetramerization domain containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_010399588.3
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(949490..955134,1009995..1011135,1011405..1011838))
location: region:949490-1011838:-1
so has part: feature:1011405-1011838:-1:exon
so has part: feature:1009995-1011135:-1:exon
so has part: feature:949490-955134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011405-1011838:-1:exon

position:1011405:-1
position: 1011405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009995-1011135:-1:exon

position:1009995:-1
position: 1009995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011135:-1
position: 1011135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949490-955134:-1:exon

position:955134:-1
position: 955134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCRTYLPPREQGTGLHSFPEVVELNVGGQVYFTRHSTLVGTPHSLLWKMFTPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDDNKQSPDDYCHSDYEEASQGSDTRICPPSLLPPDRKWGFITIGYRGSCTIGRESQADAKFRRVPRILVCGRISLVKEVFGESLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTDDKVWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKEGESGTSCNELSTSSCDSQSEASSPQETVICGPVTRQPNIQTLDRPAKKGPVQLLQQSEIRRKSDLLRTLTSGSRESNSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(954683..955134,1009995..1010823))
location: region:954683-1010823:-1
so has part: feature:1009995-1010823:-1:exon
so has part: feature:954683-955134:-1:exon

XP_010397890.1
type: Protein
SIO_000068: ncbiprotein

position:954683:-1
position: 954683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010823:-1
position: 1010823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009995-1010823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954683-955134:-1:exon

YIPF5
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1018476..1024894
location: region:1018476-1024894:1
so has part: feature:1018476-1024894:1:exon
subclass of: SO_0000010

104689472
type: Gene
SIO_000068: ncbigene

position:1018476:1
position: 1018476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024894:1
position: 1024894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018476-1024894:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559780.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(1018476..1018583,1018828..1018936,1020109..1020281,1021190..1021335,1022858..1023039,1023863..1024894)
location: region:1018476-1024894:1
so has part: feature:1018476-1018583:1:exon
so has part: feature:1018828-1018936:1:exon
so has part: feature:1020109-1020281:1:exon
so has part: feature:1021190-1021335:1:exon
so has part: feature:1022858-1023039:1:exon
so has part: feature:1023863-1024894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018476-1018583:1:exon

position:1018583:1
position: 1018583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018828-1018936:1:exon

position:1018828:1
position: 1018828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018936:1
position: 1018936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020109-1020281:1:exon

position:1020109:1
position: 1020109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020281:1
position: 1020281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1021190-1021335:1:exon

position:1021190:1
position: 1021190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021335:1
position: 1021335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022858-1023039:1:exon

position:1022858:1
position: 1022858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023039:1
position: 1023039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023863-1024894:1:exon

position:1023863:1
position: 1023863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X1
translation: MSGFDSFNTEFFQTSYSIEDQAQPYDYSGRPYSKHYGGYEYPQQGGFVPPDMMQHQQPYTGQIYQPPQSYTPASAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAIVFSLQGMMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(1018836..1018936,1020109..1020281,1021190..1021335,1022858..1023039,1023863..1024025)
location: region:1018836-1024025:1
so has part: feature:1018836-1018936:1:exon
so has part: feature:1020109-1020281:1:exon
so has part: feature:1021190-1021335:1:exon
so has part: feature:1022858-1023039:1:exon
so has part: feature:1023863-1024025:1:exon

XP_039415714.1
type: Protein
SIO_000068: ncbiprotein

position:1018836:1
position: 1018836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024025:1
position: 1024025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018836-1018936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020109-1020281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021190-1021335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022858-1023039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023863-1024025:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_039559781.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(1018871..1018936,1020055..1020281,1021190..1021335,1022858..1023039,1023863..1024894)
location: region:1018871-1024894:1
so has part: feature:1018871-1018936:1:exon
so has part: feature:1020055-1020281:1:exon
so has part: feature:1021190-1021335:1:exon
so has part: feature:1022858-1023039:1:exon
so has part: feature:1023863-1024894:1:exon

position:1018871:1
position: 1018871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018871-1018936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020055-1020281:1:exon

position:1020055:1
position: 1020055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1021190-1021335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022858-1023039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023863-1024894:1:exon

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X2
translation: MMQHQQPYTGQIYQPPQSYTPASAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAIVFSLQGMMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(1020161..1020281,1021190..1021335,1022858..1023039,1023863..1024025)
location: region:1020161-1024025:1
so has part: feature:1020161-1020281:1:exon
so has part: feature:1021190-1021335:1:exon
so has part: feature:1022858-1023039:1:exon
so has part: feature:1023863-1024025:1:exon

XP_039415715.1
type: Protein
SIO_000068: ncbiprotein

position:1020161:1
position: 1020161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020161-1020281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1021190-1021335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022858-1023039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023863-1024025:1:exon

NR3C1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1130482..1189999
location: region:1130482-1189999:1
so has part: feature:1130482-1189999:1:exon
subclass of: SO_0000010

104689473
type: Gene
SIO_000068: ncbigene

position:1130482:1
position: 1130482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189999:1
position: 1189999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130482-1189999:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 EST, 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039559405.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1130482..1130715,1132648..1133836,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1189999)
location: region:1130482-1189999:1
so has part: feature:1130482-1130715:1:exon
so has part: feature:1132648-1133836:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1189999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1130482-1130715:1:exon

position:1130715:1
position: 1130715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132648-1133836:1:exon

position:1132648:1
position: 1132648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133836:1
position: 1133836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1166685-1166848:1:exon

position:1166685:1
position: 1166685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166848:1
position: 1166848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1170753-1170869:1:exon

position:1170753:1
position: 1170753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170869:1
position: 1170869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1175514-1175792:1:exon

position:1175514:1
position: 1175514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175792:1
position: 1175792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1178244-1178388:1:exon

position:1178244:1
position: 1178244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178388:1
position: 1178388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1183511-1183641:1:exon

position:1183511:1
position: 1183511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183641:1
position: 1183641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1186410-1186567:1:exon

position:1186410:1
position: 1186410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186567:1
position: 1186567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1187435-1189999:1:exon

position:1187435:1
position: 1187435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 EST, 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010399590.3
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1131691..1131886,1132648..1133836,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1189999)
location: region:1131691-1189999:1
so has part: feature:1131691-1131886:1:exon
so has part: feature:1132648-1133836:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1189999:1:exon

position:1131691:1
position: 1131691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131691-1131886:1:exon

position:1131886:1
position: 1131886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132648-1133836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166685-1166848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170753-1170869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175514-1175792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178244-1178388:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1183511-1183641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1186410-1186567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187435-1189999:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X1
translation: MDSKELLNPSDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSTSPLPASSQSDSSQQPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSHQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGTASSDVPLEPDFPGMAGRSVPAESGAAVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFLLEGSLGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQESMGPLYCQANFSRSNLLGTKVSAISIHGVSTSGGQVYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDVSSSPSTTSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1132662..1133836,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1187587)
location: region:1132662-1187587:1
so has part: feature:1132662-1133836:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1187587:1:exon

XP_039415339.1
type: Protein
SIO_000068: ncbiprotein

position:1132662:1
position: 1132662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187587:1
position: 1187587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132662-1133836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166685-1166848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170753-1170869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175514-1175792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178244-1178388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183511-1183641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186410-1186567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187435-1187587:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X1
translation: MDSKELLNPSDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSTSPLPASSQSDSSQQPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSHQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGTASSDVPLEPDFPGMAGRSVPAESGAAVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFLLEGSLGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQESMGPLYCQANFSRSNLLGTKVSAISIHGVSTSGGQVYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDVSSSPSTTSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1132662..1133836,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1187587)
location: region:1132662-1187587:1
so has part: feature:1132662-1133836:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1187587:1:exon

XP_010397892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132662-1133836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166685-1166848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170753-1170869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175514-1175792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178244-1178388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183511-1183641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186410-1186567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187435-1187587:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019286042.2
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1151029..1151170,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1189999)
location: region:1151029-1189999:1
so has part: feature:1151029-1151170:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1189999:1:exon

position:1151029:1
position: 1151029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151029-1151170:1:exon

position:1151170:1
position: 1151170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1166685-1166848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170753-1170869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175514-1175792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178244-1178388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183511-1183641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186410-1186567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187435-1189999:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X2
translation: MIGATFFSSCLHPGMRSDVSSSPSTTSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1151136..1151170,1166685..1166848,1170753..1170869,1175514..1175792,1178244..1178388,1183511..1183641,1186410..1186567,1187435..1187587)
location: region:1151136-1187587:1
so has part: feature:1151136-1151170:1:exon
so has part: feature:1166685-1166848:1:exon
so has part: feature:1170753-1170869:1:exon
so has part: feature:1175514-1175792:1:exon
so has part: feature:1178244-1178388:1:exon
so has part: feature:1183511-1183641:1:exon
so has part: feature:1186410-1186567:1:exon
so has part: feature:1187435-1187587:1:exon

XP_019141587.1
type: Protein
SIO_000068: ncbiprotein

position:1151136:1
position: 1151136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151136-1151170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166685-1166848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170753-1170869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175514-1175792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178244-1178388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183511-1183641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186410-1186567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187435-1187587:1:exon

LOC120410715
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1191446..1195030)
location: region:1191446-1195030:-1
so has part: feature:1191446-1195030:-1:exon
subclass of: SO_0000011

120410715
type: Gene
SIO_000068: ncbigene

position:1191446:-1
position: 1191446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195030:-1
position: 1195030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191446-1195030:-1:exon

LOC120410715
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410715
product: uncharacterized LOC120410715
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005603036.1
SIO_010081: LOC120410715
subclass of: SO_0000673
so part of: LOC120410715
location: complement(join(1191446..1193423,1194630..1195030))
location: region:1191446-1195030:-1
so has part: feature:1194630-1195030:-1:exon
so has part: feature:1191446-1193423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194630-1195030:-1:exon

position:1194630:-1
position: 1194630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1191446-1193423:-1:exon

position:1193423:-1
position: 1193423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1197633..1299137)
location: region:1197633-1299137:-1
so has part: feature:1197633-1299137:-1:exon
subclass of: SO_0000010

104689474
type: Gene
SIO_000068: ncbigene

position:1197633:-1
position: 1197633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299137:-1
position: 1299137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197633-1299137:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039559389.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1197633..1199295,1201026..1201117,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1197633-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1201026-1201117:-1:exon
so has part: feature:1197633-1199295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

position:1298984:-1
position: 1298984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

position:1281385:-1
position: 1281385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281480:-1
position: 1281480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

position:1280391:-1
position: 1280391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280452:-1
position: 1280452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

position:1280009:-1
position: 1280009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280080:-1
position: 1280080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

position:1278842:-1
position: 1278842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278943:-1
position: 1278943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

position:1277106:-1
position: 1277106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277216:-1
position: 1277216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

position:1276182:-1
position: 1276182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276286:-1
position: 1276286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

position:1275485:-1
position: 1275485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275614:-1
position: 1275614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

position:1275097:-1
position: 1275097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275197:-1
position: 1275197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

position:1272409:-1
position: 1272409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272503:-1
position: 1272503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

position:1265437:-1
position: 1265437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265515:-1
position: 1265515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

position:1250738:-1
position: 1250738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250774:-1
position: 1250774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

position:1245040:-1
position: 1245040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245105:-1
position: 1245105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

position:1244250:-1
position: 1244250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244324:-1
position: 1244324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

position:1240048:-1
position: 1240048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240135:-1
position: 1240135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

position:1238926:-1
position: 1238926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238984:-1
position: 1238984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

position:1238009:-1
position: 1238009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238114:-1
position: 1238114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

position:1225773:-1
position: 1225773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225932:-1
position: 1225932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

position:1224238:-1
position: 1224238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224376:-1
position: 1224376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

position:1219829:-1
position: 1219829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219982:-1
position: 1219982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1201026-1201117:-1:exon

position:1201026:-1
position: 1201026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201117:-1
position: 1201117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1197633-1199295:-1:exon

position:1199295:-1
position: 1199295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039559388.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1197633..1199295,1201026..1201117,1203016..1203126,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1197633-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1203016-1203126:-1:exon
so has part: feature:1201026-1201117:-1:exon
so has part: feature:1197633-1199295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203016-1203126:-1:exon

position:1203016:-1
position: 1203016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203126:-1
position: 1203126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1201026-1201117:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1197633-1199295:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEGDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1199207..1199295,1201026..1201117,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1199207-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1201026-1201117:-1:exon
so has part: feature:1199207-1199295:-1:exon

XP_039415323.1
type: Protein
SIO_000068: ncbiprotein

position:1199207:-1
position: 1199207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1201026-1201117:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1199207-1199295:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X1
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEGDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1199207..1199295,1201026..1201117,1203016..1203126,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1199207-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1203016-1203126:-1:exon
so has part: feature:1201026-1201117:-1:exon
so has part: feature:1199207-1199295:-1:exon

XP_039415322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203016-1203126:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1201026-1201117:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1199207-1199295:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039559390.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1201811..1202722,1203016..1203126,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1201811-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1203016-1203126:-1:exon
so has part: feature:1201811-1202722:-1:exon

position:1201811:-1
position: 1201811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203016-1203126:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1201811-1202722:-1:exon

position:1202722:-1
position: 1202722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X3
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEGDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPIR
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1202719..1202722,1203016..1203126,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1202719-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1203016-1203126:-1:exon
so has part: feature:1202719-1202722:-1:exon

XP_039415324.1
type: Protein
SIO_000068: ncbiprotein

position:1202719:-1
position: 1202719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203016-1203126:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1202719-1202722:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039559391.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1203415..1205761,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1203415-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1203415-1205761:-1:exon

position:1203415:-1
position: 1203415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203415-1205761:-1:exon

position:1205761:-1
position: 1205761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X4
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEGDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLKRPSQSPPE
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1205731..1205761,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1205731-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1205731-1205761:-1:exon

XP_039415325.1
type: Protein
SIO_000068: ncbiprotein

position:1205731:-1
position: 1205731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1205731-1205761:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039559392.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1205768..1207559,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1205768-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1205768-1207559:-1:exon

position:1205768:-1
position: 1205768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1205768-1207559:-1:exon

position:1207559:-1
position: 1207559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X5
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEGDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLINSRL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1207541..1207559,1219829..1219982,1224238..1224376,1225773..1225932,1238009..1238114,1238926..1238984,1240048..1240135,1244250..1244324,1245040..1245105,1250738..1250774,1265437..1265515,1272409..1272503,1275097..1275197,1275485..1275614,1276182..1276286,1277106..1277216,1278842..1278943,1280009..1280080,1280391..1280452,1281385..1281480,1298984..1299137))
location: region:1207541-1299137:-1
so has part: feature:1298984-1299137:-1:exon
so has part: feature:1281385-1281480:-1:exon
so has part: feature:1280391-1280452:-1:exon
so has part: feature:1280009-1280080:-1:exon
so has part: feature:1278842-1278943:-1:exon
so has part: feature:1277106-1277216:-1:exon
so has part: feature:1276182-1276286:-1:exon
so has part: feature:1275485-1275614:-1:exon
so has part: feature:1275097-1275197:-1:exon
so has part: feature:1272409-1272503:-1:exon
so has part: feature:1265437-1265515:-1:exon
so has part: feature:1250738-1250774:-1:exon
so has part: feature:1245040-1245105:-1:exon
so has part: feature:1244250-1244324:-1:exon
so has part: feature:1240048-1240135:-1:exon
so has part: feature:1238926-1238984:-1:exon
so has part: feature:1238009-1238114:-1:exon
so has part: feature:1225773-1225932:-1:exon
so has part: feature:1224238-1224376:-1:exon
so has part: feature:1219829-1219982:-1:exon
so has part: feature:1207541-1207559:-1:exon

XP_039415326.1
type: Protein
SIO_000068: ncbiprotein

position:1207541:-1
position: 1207541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298984-1299137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281385-1281480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280391-1280452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280009-1280080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278842-1278943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277106-1277216:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276182-1276286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275485-1275614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275097-1275197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272409-1272503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265437-1265515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1250738-1250774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245040-1245105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1244250-1244324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240048-1240135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238926-1238984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1238009-1238114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1225773-1225932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224238-1224376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1219829-1219982:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1207541-1207559:-1:exon

FGF1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1315092..1336206
location: region:1315092-1336206:1
so has part: feature:1315092-1336206:1:exon
subclass of: SO_0000010

104689475
type: Gene
SIO_000068: ncbigene

position:1315092:1
position: 1315092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336206:1
position: 1336206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315092-1336206:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FGF1
product: fibroblast growth factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039559615.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1315092..1315367,1331330..1331522,1334794..1334897,1335606..1336206)
location: region:1315092-1336206:1
so has part: feature:1315092-1315367:1:exon
so has part: feature:1331330-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335606-1336206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1315092-1315367:1:exon

position:1315367:1
position: 1315367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331330-1331522:1:exon

position:1331330:1
position: 1331330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331522:1
position: 1331522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1334794-1334897:1:exon

position:1334794:1
position: 1334794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334897:1
position: 1334897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335606-1336206:1:exon

position:1335606:1
position: 1335606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FGF1
product: fibroblast growth factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039559613.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1315094..1315367,1331330..1331522,1334794..1334897,1335603..1336206)
location: region:1315094-1336206:1
so has part: feature:1315094-1315367:1:exon
so has part: feature:1331330-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335603-1336206:1:exon

position:1315094:1
position: 1315094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315094-1315367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331330-1331522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334794-1334897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335603-1336206:1:exon

position:1335603:1
position: 1335603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FGF1
product: fibroblast growth factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_039559614.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1317853..1317958,1331330..1331522,1334794..1334897,1335603..1336206)
location: region:1317853-1336206:1
so has part: feature:1317853-1317958:1:exon
so has part: feature:1331330-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335603-1336206:1:exon

position:1317853:1
position: 1317853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1317853-1317958:1:exon

position:1317958:1
position: 1317958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331330-1331522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334794-1334897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335603-1336206:1:exon

LOC104689476
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1326519..1377167)
location: region:1326519-1377167:-1
so has part: feature:1326519-1377167:-1:exon
subclass of: SO_0000011

104689476
type: Gene
SIO_000068: ncbigene

position:1326519:-1
position: 1326519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377167:-1
position: 1377167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326519-1377167:-1:exon

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005603054.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1330383,1333570..1333688,1342164..1342300,1346489..1346653,1354557..1354639,1355164..1355291,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346653:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1326519-1330383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

position:1377048:-1
position: 1377048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

position:1355164:-1
position: 1355164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355291:-1
position: 1355291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

position:1354557:-1
position: 1354557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354639:-1
position: 1354639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346653:-1:exon

position:1346489:-1
position: 1346489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346653:-1
position: 1346653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

position:1342164:-1
position: 1342164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342300:-1
position: 1342300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

position:1333570:-1
position: 1333570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333688:-1
position: 1333688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1326519-1330383:-1:exon

position:1330383:-1
position: 1330383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005603055.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1327229,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1355164..1355291,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1326519-1327229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346668:-1:exon

position:1346668:-1
position: 1346668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1326519-1327229:-1:exon

position:1327229:-1
position: 1327229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005603052.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1327229,1327314..1330383,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1355164..1355291,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1327314-1330383:-1:exon
so has part: feature:1326519-1327229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327314-1330383:-1:exon

position:1327314:-1
position: 1327314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1326519-1327229:-1:exon

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005603049.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1330383,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1355164..1355291,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1326519-1330383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1326519-1330383:-1:exon

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005603053.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1330383,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1354964..1355048,1355164..1355291,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354964-1355048:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1326519-1330383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354964-1355048:-1:exon

position:1354964:-1
position: 1354964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355048:-1
position: 1355048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1346489-1346668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1326519-1330383:-1:exon

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005603050.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1326519..1330383,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1355164..1355333,1377048..1377167))
location: region:1326519-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355333:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1326519-1330383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355333:-1:exon

position:1355333:-1
position: 1355333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1326519-1330383:-1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1331354..1331522,1334794..1334897,1335603..1335797)
location: region:1331354-1335797:1
so has part: feature:1331354-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335603-1335797:1:exon

XP_039415547.1
type: Protein
SIO_000068: ncbiprotein

position:1331354:1
position: 1331354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335797:1
position: 1335797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331354-1331522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334794-1334897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335603-1335797:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1331354..1331522,1334794..1334897,1335603..1335797)
location: region:1331354-1335797:1
so has part: feature:1331354-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335603-1335797:1:exon

XP_039415548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1331354-1331522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334794-1334897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335603-1335797:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X2
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1331354..1331522,1334794..1334897,1335606..1335797)
location: region:1331354-1335797:1
so has part: feature:1331354-1331522:1:exon
so has part: feature:1334794-1334897:1:exon
so has part: feature:1335606-1335797:1:exon

XP_039415549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1331354-1331522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334794-1334897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335606-1335797:1:exon

LOC104689476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689476
product: uncharacterized LOC104689476, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005603051.1
SIO_010081: LOC104689476
subclass of: SO_0000673
so part of: LOC104689476
location: complement(join(1331522..1332998,1333570..1333688,1342164..1342300,1346489..1346668,1354557..1354639,1355164..1355291,1377048..1377167))
location: region:1331522-1377167:-1
so has part: feature:1377048-1377167:-1:exon
so has part: feature:1355164-1355291:-1:exon
so has part: feature:1354557-1354639:-1:exon
so has part: feature:1346489-1346668:-1:exon
so has part: feature:1342164-1342300:-1:exon
so has part: feature:1333570-1333688:-1:exon
so has part: feature:1331522-1332998:-1:exon

position:1331522:-1
position: 1331522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377048-1377167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355164-1355291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354557-1354639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346489-1346668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342164-1342300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333570-1333688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1331522-1332998:-1:exon

position:1332998:-1
position: 1332998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPRY4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1377282..1391361
location: region:1377282-1391361:1
so has part: feature:1377282-1391361:1:exon
subclass of: SO_0000010

104689477
type: Gene
SIO_000068: ncbigene

position:1377282:1
position: 1377282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391361:1
position: 1391361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377282-1391361:1:exon

SPRY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPRY4
product: sprouty RTK signaling antagonist 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_010399595.4
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: join(1377282..1377470,1387008..1391361)
location: region:1377282-1391361:1
so has part: feature:1377282-1377470:1:exon
so has part: feature:1387008-1391361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377282-1377470:1:exon

position:1377470:1
position: 1377470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1387008-1391361:1:exon

position:1387008:1
position: 1387008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 4
translation: MESRIPHNITVVPNSVMVQPLLDSRIPYGRLQHPLTILPIDQMKTTHIENDYTDNPSASQPPAQKRPRAPHELGLSSQQHPQRCEQDVTHPWISFSGRPSSISSSSSTSSDQRLLDHMAPVPVAEQSSPRAVRIQPKVINCKPLDLKGTVSQELDKHFLLCEACGKCKCKECALPRTLPSCWVCNQECLCSAQNLVNYSTCMCLVKGVFYHCTNEDDEGTCADHPCSCSHSNCCARWSFMSALSLVLPCLLCYLPATGCVKLSQRCYDQVSRPGCRCKNTNSVICKALPESKGAEKPF
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: 1387054..1387950
location: region:1387054-1387950:1
so has part: feature:1387054-1387950:1:exon

XP_010397897.1
type: Protein
SIO_000068: ncbiprotein

position:1387054:1
position: 1387054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387950:1
position: 1387950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387054-1387950:1:exon

NDFIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1411825..1427731)
location: region:1411825-1427731:-1
so has part: feature:1411825-1427731:-1:exon
subclass of: SO_0000010

104689478
type: Gene
SIO_000068: ncbigene

position:1411825:-1
position: 1411825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427731:-1
position: 1427731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411825-1427731:-1:exon

NDFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NDFIP1
product: Nedd4 family interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 22 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559749.1
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1411825..1411972,1413884..1413989,1414550..1414616,1416262..1416386,1416554..1416641,1417491..1417621,1418370..1418457,1427453..1427731))
location: region:1411825-1427731:-1
so has part: feature:1427453-1427731:-1:exon
so has part: feature:1418370-1418457:-1:exon
so has part: feature:1417491-1417621:-1:exon
so has part: feature:1416554-1416641:-1:exon
so has part: feature:1416262-1416386:-1:exon
so has part: feature:1414550-1414616:-1:exon
so has part: feature:1413884-1413989:-1:exon
so has part: feature:1411825-1411972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1427453-1427731:-1:exon

position:1427453:-1
position: 1427453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1418370-1418457:-1:exon

position:1418370:-1
position: 1418370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418457:-1
position: 1418457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1417491-1417621:-1:exon

position:1417491:-1
position: 1417491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417621:-1
position: 1417621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1416554-1416641:-1:exon

position:1416554:-1
position: 1416554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416641:-1
position: 1416641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1416262-1416386:-1:exon

position:1416262:-1
position: 1416262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416386:-1
position: 1416386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1414550-1414616:-1:exon

position:1414550:-1
position: 1414550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414616:-1
position: 1414616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1413884-1413989:-1:exon

position:1413884:-1
position: 1413884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413989:-1
position: 1413989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1411825-1411972:-1:exon

position:1411972:-1
position: 1411972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MVLEVSPSLGGSVIPCPLQERCPRPGAAPAAGGAEGGAAERDGEGGSERSPQRAATGPPPPPPAQRPHRPRSAMAAAAAEPSTGRYQQLQNEEEPGEAVPVVNDAPPPYSSISAESTAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDDDFVTRDDFDDTDQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPDTFSTLPRTRVLFIY
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1413886..1413989,1414550..1414616,1416262..1416386,1416554..1416641,1417491..1417621,1418370..1418457,1427453..1427716))
location: region:1413886-1427716:-1
so has part: feature:1427453-1427716:-1:exon
so has part: feature:1418370-1418457:-1:exon
so has part: feature:1417491-1417621:-1:exon
so has part: feature:1416554-1416641:-1:exon
so has part: feature:1416262-1416386:-1:exon
so has part: feature:1414550-1414616:-1:exon
so has part: feature:1413886-1413989:-1:exon

XP_039415683.1
type: Protein
SIO_000068: ncbiprotein

position:1413886:-1
position: 1413886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427716:-1
position: 1427716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427453-1427716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418370-1418457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1417491-1417621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416554-1416641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1416262-1416386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414550-1414616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1413886-1413989:-1:exon

GNPDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1434002..1438812
location: region:1434002-1438812:1
so has part: feature:1434002-1438812:1:exon
subclass of: SO_0000010

104689479
type: Gene
SIO_000068: ncbigene

position:1434002:1
position: 1434002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438812:1
position: 1438812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434002-1438812:1:exon

GNPDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GNPDA1
product: glucosamine-6-phosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559618.1
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1434002..1434302,1434379..1434480,1435598..1435780,1436361..1436545,1437128..1437302,1437574..1438812)
location: region:1434002-1438812:1
so has part: feature:1434002-1434302:1:exon
so has part: feature:1434379-1434480:1:exon
so has part: feature:1435598-1435780:1:exon
so has part: feature:1436361-1436545:1:exon
so has part: feature:1437128-1437302:1:exon
so has part: feature:1437574-1438812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1434002-1434302:1:exon

position:1434302:1
position: 1434302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1434379-1434480:1:exon

position:1434379:1
position: 1434379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434480:1
position: 1434480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1435598-1435780:1:exon

position:1435598:1
position: 1435598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435780:1
position: 1435780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1436361-1436545:1:exon

position:1436361:1
position: 1436361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436545:1
position: 1436545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1437128-1437302:1:exon

position:1437128:1
position: 1437128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437302:1
position: 1437302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1437574-1438812:1:exon

position:1437574:1
position: 1437574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNPDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1
translation: MKLIILENYSQASEWAAKYIRNRIVQFGPGPGRFFTLGLPTGSTPLGCYSKLVEYYRNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDISPENVHILDGNAPDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEDGVNHMWTVSAFQQHPNTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVEPLYSMKEMGAERSQSKKPYSD
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1434179..1434302,1434379..1434480,1435598..1435780,1436361..1436545,1437128..1437302,1437574..1437671)
location: region:1434179-1437671:1
so has part: feature:1434179-1434302:1:exon
so has part: feature:1434379-1434480:1:exon
so has part: feature:1435598-1435780:1:exon
so has part: feature:1436361-1436545:1:exon
so has part: feature:1437128-1437302:1:exon
so has part: feature:1437574-1437671:1:exon

XP_039415552.1
type: Protein
SIO_000068: ncbiprotein

position:1434179:1
position: 1434179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437671:1
position: 1437671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434179-1434302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434379-1434480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435598-1435780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436361-1436545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437128-1437302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437574-1437671:1:exon

RNF14
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1439113..1446209)
location: region:1439113-1446209:-1
so has part: feature:1439113-1446209:-1:exon
subclass of: SO_0000010

104689480
type: Gene
SIO_000068: ncbigene

position:1439113:-1
position: 1439113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446209:-1
position: 1446209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439113-1446209:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RNF14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010399601.3
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1439113..1439811,1440520..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1444070,1444360..1444511,1445006..1445187,1445692..1446084))
location: region:1439113-1446084:-1
so has part: feature:1445692-1446084:-1:exon
so has part: feature:1445006-1445187:-1:exon
so has part: feature:1444360-1444511:-1:exon
so has part: feature:1443543-1444070:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1440520-1440602:-1:exon
so has part: feature:1439113-1439811:-1:exon

position:1446084:-1
position: 1446084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445692-1446084:-1:exon

position:1445692:-1
position: 1445692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445006-1445187:-1:exon

position:1445006:-1
position: 1445006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445187:-1
position: 1445187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1444360-1444511:-1:exon

position:1444360:-1
position: 1444360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444511:-1
position: 1444511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1443543-1444070:-1:exon

position:1443543:-1
position: 1443543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444070:-1
position: 1444070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1442605-1442833:-1:exon

position:1442605:-1
position: 1442605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442833:-1
position: 1442833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1441834-1442006:-1:exon

position:1441834:-1
position: 1441834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442006:-1
position: 1442006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1441195-1441325:-1:exon

position:1441195:-1
position: 1441195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441325:-1
position: 1441325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1440520-1440602:-1:exon

position:1440520:-1
position: 1440520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440602:-1
position: 1440602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1439113-1439811:-1:exon

position:1439811:-1
position: 1439811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RNF14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010399600.3
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1439325..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1444070,1444360..1444511,1445006..1445187,1445692..1445836,1446139..1446209))
location: region:1439325-1446209:-1
so has part: feature:1446139-1446209:-1:exon
so has part: feature:1445692-1445836:-1:exon
so has part: feature:1445006-1445187:-1:exon
so has part: feature:1444360-1444511:-1:exon
so has part: feature:1443543-1444070:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1439325-1440602:-1:exon

position:1439325:-1
position: 1439325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446139-1446209:-1:exon

position:1446139:-1
position: 1446139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445692-1445836:-1:exon

position:1445836:-1
position: 1445836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445006-1445187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1444360-1444511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443543-1444070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1442605-1442833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1441834-1442006:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1441195-1441325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439325-1440602:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: RNF14
product: ring finger protein 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_010399602.3
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1439325..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1444070,1444360..1444507,1445006..1445088))
location: region:1439325-1445088:-1
so has part: feature:1445006-1445088:-1:exon
so has part: feature:1444360-1444507:-1:exon
so has part: feature:1443543-1444070:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1439325-1440602:-1:exon

position:1445088:-1
position: 1445088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445006-1445088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444360-1444507:-1:exon

position:1444507:-1
position: 1444507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1443543-1444070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442605-1442833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441834-1442006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1441195-1441325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1439325-1440602:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQDFKIFVRGSSTESLQSSRFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1440539..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1444070,1444360..1444511,1445006..1445159))
location: region:1440539-1445159:-1
so has part: feature:1445006-1445159:-1:exon
so has part: feature:1444360-1444511:-1:exon
so has part: feature:1443543-1444070:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1440539-1440602:-1:exon

XP_010397902.1
type: Protein
SIO_000068: ncbiprotein

position:1440539:-1
position: 1440539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445159:-1
position: 1445159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445006-1445159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444360-1444511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443543-1444070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442605-1442833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441834-1442006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1441195-1441325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440539-1440602:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQDFKIFVRGSSTESLQSSRFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1440539..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1444070,1444360..1444511,1445006..1445159))
location: region:1440539-1445159:-1
so has part: feature:1445006-1445159:-1:exon
so has part: feature:1444360-1444511:-1:exon
so has part: feature:1443543-1444070:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1440539-1440602:-1:exon

XP_010397903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1445006-1445159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444360-1444511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443543-1444070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442605-1442833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441834-1442006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1441195-1441325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440539-1440602:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1440539..1440602,1441195..1441325,1441834..1442006,1442605..1442833,1443543..1443998))
location: region:1440539-1443998:-1
so has part: feature:1443543-1443998:-1:exon
so has part: feature:1442605-1442833:-1:exon
so has part: feature:1441834-1442006:-1:exon
so has part: feature:1441195-1441325:-1:exon
so has part: feature:1440539-1440602:-1:exon

XP_010397904.1
type: Protein
SIO_000068: ncbiprotein

position:1443998:-1
position: 1443998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443543-1443998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442605-1442833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441834-1442006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441195-1441325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1440539-1440602:-1:exon

HSPA4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1446666..1462768)
location: region:1446666-1462768:-1
so has part: feature:1446666-1462768:-1:exon
subclass of: SO_0000010

104689481
type: Gene
SIO_000068: ncbigene

position:1446666:-1
position: 1446666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462768:-1
position: 1462768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446666-1462768:-1:exon

HSPA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HSPA4
product: heat shock protein family A (Hsp70) member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559457.1
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1446666..1447846,1448051..1448212,1448584..1448703,1449001..1449108,1449815..1449940,1450409..1450561,1451065..1451151,1451513..1451694,1452128..1452261,1452611..1452717,1452840..1452991,1453273..1453349,1453724..1453968,1455291..1455424,1455776..1455875,1456328..1456450,1456654..1456794,1458435..1458492,1462610..1462768))
location: region:1446666-1462768:-1
so has part: feature:1462610-1462768:-1:exon
so has part: feature:1458435-1458492:-1:exon
so has part: feature:1456654-1456794:-1:exon
so has part: feature:1456328-1456450:-1:exon
so has part: feature:1455776-1455875:-1:exon
so has part: feature:1455291-1455424:-1:exon
so has part: feature:1453724-1453968:-1:exon
so has part: feature:1453273-1453349:-1:exon
so has part: feature:1452840-1452991:-1:exon
so has part: feature:1452611-1452717:-1:exon
so has part: feature:1452128-1452261:-1:exon
so has part: feature:1451513-1451694:-1:exon
so has part: feature:1451065-1451151:-1:exon
so has part: feature:1450409-1450561:-1:exon
so has part: feature:1449815-1449940:-1:exon
so has part: feature:1449001-1449108:-1:exon
so has part: feature:1448584-1448703:-1:exon
so has part: feature:1448051-1448212:-1:exon
so has part: feature:1446666-1447846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462610-1462768:-1:exon

position:1462610:-1
position: 1462610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1458435-1458492:-1:exon

position:1458435:-1
position: 1458435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458492:-1
position: 1458492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1456654-1456794:-1:exon

position:1456654:-1
position: 1456654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456794:-1
position: 1456794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1456328-1456450:-1:exon

position:1456328:-1
position: 1456328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456450:-1
position: 1456450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1455776-1455875:-1:exon

position:1455776:-1
position: 1455776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455875:-1
position: 1455875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1455291-1455424:-1:exon

position:1455291:-1
position: 1455291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455424:-1
position: 1455424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1453724-1453968:-1:exon

position:1453724:-1
position: 1453724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453968:-1
position: 1453968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1453273-1453349:-1:exon

position:1453273:-1
position: 1453273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453349:-1
position: 1453349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1452840-1452991:-1:exon

position:1452840:-1
position: 1452840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452991:-1
position: 1452991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1452611-1452717:-1:exon

position:1452611:-1
position: 1452611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452717:-1
position: 1452717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1452128-1452261:-1:exon

position:1452128:-1
position: 1452128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452261:-1
position: 1452261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1451513-1451694:-1:exon

position:1451513:-1
position: 1451513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451694:-1
position: 1451694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1451065-1451151:-1:exon

position:1451065:-1
position: 1451065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451151:-1
position: 1451151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1450409-1450561:-1:exon

position:1450409:-1
position: 1450409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450561:-1
position: 1450561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1449815-1449940:-1:exon

position:1449815:-1
position: 1449815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449940:-1
position: 1449940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1449001-1449108:-1:exon

position:1449001:-1
position: 1449001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449108:-1
position: 1449108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1448584-1448703:-1:exon

position:1448584:-1
position: 1448584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448703:-1
position: 1448703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1448051-1448212:-1:exon

position:1448051:-1
position: 1448051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448212:-1
position: 1448212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1446666-1447846:-1:exon

position:1447846:-1
position: 1447846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4
translation: MSVVGIDLGFQSCYVAVARAGGIETVANEYSDRSTPACISFGPKNRSIGAAAKSQVISNAKNTVQSFKRFHGRAFSDPFVQAEKASLAYELVQLPTGSTGIKAMYMEEERNFTIEQVTGMLLTKLKETAENALKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLINETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVEYFCEEFGKKYKLDIKSKIRALLRLYQECERLKKLMSANASDLPMNIECFMNDIDVSGTMNRSKFLEMCEGLLARVEPPLRSVLEQARLKKEDIYAVEIVGGTTRIPAVKEKISKFFGKEVSTTLNADEAVARGCALQCAILSPAFKVREFSITDLIPYPISLRWNSPAEEGLSDCEVFPKNHAAPFSKVLTFYRKEPFTLEAYYSSPKELPYPDPAIAHFLVQKVTPQTDGSSSKVKVKVRVNIHGIFSVSSASLVEVHKSDENEEPMETDQHAKEEEKMQVDEEQQKAEEQQQTQPENKAESEEMETCQADSKDKKVDQPPQAKKAKVKTTTVDLPIENQLVWQIGKDMLNLFIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLCGVYEKFVSEDDRNSFTLKLEDTEIWLYEDGEDQPKQIYIDKLTELKTLGQPIQARFQESEERPKAFEDLGKQIQQYMKAVHAFKAKDELYEHLDEADVAKVEKSANEAMEWMNNNLNLQNKRSLTLDPVIKAKDIQAKAKELAGICNPIVNKPKPKVELPKEEQKPTEPNGPLDGQGDAGSGTQPPEQGSAPTATDKKLPEMDID
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1447649..1447846,1448051..1448212,1448584..1448703,1449001..1449108,1449815..1449940,1450409..1450561,1451065..1451151,1451513..1451694,1452128..1452261,1452611..1452717,1452840..1452991,1453273..1453349,1453724..1453968,1455291..1455424,1455776..1455875,1456328..1456450,1456654..1456794,1458435..1458492,1462610..1462716))
location: region:1447649-1462716:-1
so has part: feature:1462610-1462716:-1:exon
so has part: feature:1458435-1458492:-1:exon
so has part: feature:1456654-1456794:-1:exon
so has part: feature:1456328-1456450:-1:exon
so has part: feature:1455776-1455875:-1:exon
so has part: feature:1455291-1455424:-1:exon
so has part: feature:1453724-1453968:-1:exon
so has part: feature:1453273-1453349:-1:exon
so has part: feature:1452840-1452991:-1:exon
so has part: feature:1452611-1452717:-1:exon
so has part: feature:1452128-1452261:-1:exon
so has part: feature:1451513-1451694:-1:exon
so has part: feature:1451065-1451151:-1:exon
so has part: feature:1450409-1450561:-1:exon
so has part: feature:1449815-1449940:-1:exon
so has part: feature:1449001-1449108:-1:exon
so has part: feature:1448584-1448703:-1:exon
so has part: feature:1448051-1448212:-1:exon
so has part: feature:1447649-1447846:-1:exon

XP_039415391.1
type: Protein
SIO_000068: ncbiprotein

position:1447649:-1
position: 1447649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462716:-1
position: 1462716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462610-1462716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1458435-1458492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1456654-1456794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456328-1456450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455776-1455875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455291-1455424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1453724-1453968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1453273-1453349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452840-1452991:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452611-1452717:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452128-1452261:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451513-1451694:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1451065-1451151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450409-1450561:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1449815-1449940:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1449001-1449108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1448584-1448703:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1448051-1448212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1447649-1447846:-1:exon

LOC104689482
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1462824..1463476
location: region:1462824-1463476:1
so has part: feature:1462824-1463476:1:exon
subclass of: SO_0000011

104689482
type: Gene
SIO_000068: ncbigene

position:1462824:1
position: 1462824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463476:1
position: 1463476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462824-1463476:1:exon

LOC104689482
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689482
product: uncharacterized LOC104689482
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_751830.3
SIO_010081: LOC104689482
subclass of: SO_0000673
so part of: LOC104689482
location: join(1462824..1463104,1463189..1463476)
location: region:1462824-1463476:1
so has part: feature:1462824-1463104:1:exon
so has part: feature:1463189-1463476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462824-1463104:1:exon

position:1463104:1
position: 1463104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463189-1463476:1:exon

position:1463189:1
position: 1463189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFF4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1476250..1523328
location: region:1476250-1523328:1
so has part: feature:1476250-1523328:1:exon
subclass of: SO_0000010

104689634
type: Gene
SIO_000068: ncbigene

position:1476250:1
position: 1476250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523328:1
position: 1523328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476250-1523328:1:exon

AFF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AFF4
product: AF4/FMR2 family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039559926.1
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1476250..1476518,1492728..1492854,1494319..1495095,1496399..1496443,1497312..1497398,1502443..1502479,1503972..1504020,1505214..1505234,1505796..1505850,1506830..1506867,1507265..1507427,1507906..1508823,1510960..1511048,1512539..1512776,1513800..1513897,1514426..1514489,1514634..1514770,1515173..1515244,1515901..1515994,1516700..1516743,1517520..1517740,1518284..1523328)
location: region:1476250-1523328:1
so has part: feature:1476250-1476518:1:exon
so has part: feature:1492728-1492854:1:exon
so has part: feature:1494319-1495095:1:exon
so has part: feature:1496399-1496443:1:exon
so has part: feature:1497312-1497398:1:exon
so has part: feature:1502443-1502479:1:exon
so has part: feature:1503972-1504020:1:exon
so has part: feature:1505214-1505234:1:exon
so has part: feature:1505796-1505850:1:exon
so has part: feature:1506830-1506867:1:exon
so has part: feature:1507265-1507427:1:exon
so has part: feature:1507906-1508823:1:exon
so has part: feature:1510960-1511048:1:exon
so has part: feature:1512539-1512776:1:exon
so has part: feature:1513800-1513897:1:exon
so has part: feature:1514426-1514489:1:exon
so has part: feature:1514634-1514770:1:exon
so has part: feature:1515173-1515244:1:exon
so has part: feature:1515901-1515994:1:exon
so has part: feature:1516700-1516743:1:exon
so has part: feature:1517520-1517740:1:exon
so has part: feature:1518284-1523328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1476250-1476518:1:exon

position:1476518:1
position: 1476518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1492728-1492854:1:exon

position:1492728:1
position: 1492728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492854:1
position: 1492854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1494319-1495095:1:exon

position:1494319:1
position: 1494319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495095:1
position: 1495095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1496399-1496443:1:exon

position:1496399:1
position: 1496399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496443:1
position: 1496443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1497312-1497398:1:exon

position:1497312:1
position: 1497312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497398:1
position: 1497398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1502443-1502479:1:exon

position:1502443:1
position: 1502443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502479:1
position: 1502479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1503972-1504020:1:exon

position:1503972:1
position: 1503972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504020:1
position: 1504020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1505214-1505234:1:exon

position:1505214:1
position: 1505214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505234:1
position: 1505234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1505796-1505850:1:exon

position:1505796:1
position: 1505796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505850:1
position: 1505850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1506830-1506867:1:exon

position:1506830:1
position: 1506830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506867:1
position: 1506867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1507265-1507427:1:exon

position:1507265:1
position: 1507265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507427:1
position: 1507427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1507906-1508823:1:exon

position:1507906:1
position: 1507906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508823:1
position: 1508823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1510960-1511048:1:exon

position:1510960:1
position: 1510960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511048:1
position: 1511048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1512539-1512776:1:exon

position:1512539:1
position: 1512539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512776:1
position: 1512776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1513800-1513897:1:exon

position:1513800:1
position: 1513800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513897:1
position: 1513897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1514426-1514489:1:exon

position:1514426:1
position: 1514426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514489:1
position: 1514489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1514634-1514770:1:exon

position:1514634:1
position: 1514634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514770:1
position: 1514770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1515173-1515244:1:exon

position:1515173:1
position: 1515173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515244:1
position: 1515244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1515901-1515994:1:exon

position:1515901:1
position: 1515901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515994:1
position: 1515994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1516700-1516743:1:exon

position:1516700:1
position: 1516700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516743:1
position: 1516743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1517520-1517740:1:exon

position:1517520:1
position: 1517520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517740:1
position: 1517740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1518284-1523328:1:exon

position:1518284:1
position: 1518284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4
translation: MDRWDPSGSAARLAAAPPPSPGPGPPRPAPPGGSSAPPSFAGGGSQEMVRASRSGQRSNMNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMTDLIGDRPLQKIVAIPKPSVPAAPDDKPAPGFFGEQRHGAGSHQSSKWTPVGPAPSTSAQSQKRSAGLGGHGQRSGGGAGGAGARHERDSYGGGRKKGQHSSEHSKGRSASPGKPPAVSSLGSGHSRAHGSDHHGKDHQRSKSPRDPDPSWDSPSRVPSFASGQHSNQSFPPSLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSSGVNELKPSSKAHLTKLKIPSQPLDASASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSTFGTGEQKRYNPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQKGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDLSLLSRIPGKPYKDADAAKTEKKSAPEKHARESQKQPSDKSSTKGKRKHKQNEDENRASESKKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQSSSLKSSSNPGKESSSGSKSSSSSKQKKTEGKGSSSAKEAKEKILNNSSSCPPASAQATESVKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKESALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNTSIMTELVRYTRQGLHWLRLDAK
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1476346..1476518,1492728..1492854,1494319..1495095,1496399..1496443,1497312..1497398,1502443..1502479,1503972..1504020,1505214..1505234,1505796..1505850,1506830..1506867,1507265..1507427,1507906..1508823,1510960..1511048,1512539..1512776,1513800..1513897,1514426..1514489,1514634..1514770,1515173..1515244,1515901..1515994,1516700..1516743,1517520..1517740,1518284..1518402)
location: region:1476346-1518402:1
so has part: feature:1476346-1476518:1:exon
so has part: feature:1492728-1492854:1:exon
so has part: feature:1494319-1495095:1:exon
so has part: feature:1496399-1496443:1:exon
so has part: feature:1497312-1497398:1:exon
so has part: feature:1502443-1502479:1:exon
so has part: feature:1503972-1504020:1:exon
so has part: feature:1505214-1505234:1:exon
so has part: feature:1505796-1505850:1:exon
so has part: feature:1506830-1506867:1:exon
so has part: feature:1507265-1507427:1:exon
so has part: feature:1507906-1508823:1:exon
so has part: feature:1510960-1511048:1:exon
so has part: feature:1512539-1512776:1:exon
so has part: feature:1513800-1513897:1:exon
so has part: feature:1514426-1514489:1:exon
so has part: feature:1514634-1514770:1:exon
so has part: feature:1515173-1515244:1:exon
so has part: feature:1515901-1515994:1:exon
so has part: feature:1516700-1516743:1:exon
so has part: feature:1517520-1517740:1:exon
so has part: feature:1518284-1518402:1:exon

XP_039415860.1
type: Protein
SIO_000068: ncbiprotein

position:1476346:1
position: 1476346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518402:1
position: 1518402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476346-1476518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1492728-1492854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1494319-1495095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496399-1496443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497312-1497398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1502443-1502479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1503972-1504020:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1505214-1505234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1505796-1505850:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1506830-1506867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1507265-1507427:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1507906-1508823:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1510960-1511048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1512539-1512776:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1513800-1513897:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1514426-1514489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514634-1514770:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1515173-1515244:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1515901-1515994:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1516700-1516743:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1517520-1517740:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1518284-1518402:1:exon

LEAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1523872..1525963)
location: region:1523872-1525963:-1
so has part: feature:1523872-1525963:-1:exon
subclass of: SO_0000010

104689484
type: Gene
SIO_000068: ncbigene

position:1523872:-1
position: 1523872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525963:-1
position: 1525963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523872-1525963:-1:exon

LEAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LEAP2
product: liver enriched antimicrobial peptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010399606.4
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1523872..1524207,1525207..1525358,1525782..1525963))
location: region:1523872-1525963:-1
so has part: feature:1525782-1525963:-1:exon
so has part: feature:1525207-1525358:-1:exon
so has part: feature:1523872-1524207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525782-1525963:-1:exon

position:1525782:-1
position: 1525782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1525207-1525358:-1:exon

position:1525207:-1
position: 1525207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525358:-1
position: 1525358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1523872-1524207:-1:exon

position:1524207:-1
position: 1524207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liver-expressed antimicrobial peptide 2
translation: MHWWKVMAALLLCSLLLSQTHGVSLSLSQPHSQPRSPRQRRMTPFWRGVSLRPIGASCRDNSECLTMLCRKNRCLLSTASA
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1524171..1524207,1525207..1525358,1525782..1525838))
location: region:1524171-1525838:-1
so has part: feature:1525782-1525838:-1:exon
so has part: feature:1525207-1525358:-1:exon
so has part: feature:1524171-1524207:-1:exon

XP_010397908.1
type: Protein
SIO_000068: ncbiprotein

position:1524171:-1
position: 1524171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525838:-1
position: 1525838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525782-1525838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525207-1525358:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1524171-1524207:-1:exon

LOC104689483
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1524173..1527953
location: region:1524173-1527953:1
so has part: feature:1524173-1527953:1:exon
subclass of: SO_0000011

104689483
type: Gene
SIO_000068: ncbigene

position:1524173:1
position: 1524173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527953:1
position: 1527953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1524173-1527953:1:exon

LOC104689483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC104689483
product: uncharacterized LOC104689483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_751831.3
SIO_010081: LOC104689483
subclass of: SO_0000673
so part of: LOC104689483
location: join(1524173..1525218,1525962..1526090,1527555..1527953)
location: region:1524173-1527953:1
so has part: feature:1524173-1525218:1:exon
so has part: feature:1525962-1526090:1:exon
so has part: feature:1527555-1527953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1524173-1525218:1:exon

position:1525218:1
position: 1525218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1525962-1526090:1:exon

position:1525962:1
position: 1525962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526090:1
position: 1526090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1527555-1527953:1:exon

position:1527555:1
position: 1527555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120410768
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1530166..1531180)
location: region:1530166-1531180:-1
so has part: feature:1530166-1531180:-1:exon
subclass of: SO_0000010

120410768
type: Gene
SIO_000068: ncbigene

position:1530166:-1
position: 1530166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531180:-1
position: 1531180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530166-1531180:-1:exon

LOC120410768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC120410768
product: cytochrome b-c1 complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559927.1
SIO_010081: LOC120410768
subclass of: SO_0000673
so part of: LOC120410768
location: complement(join(1530166..1530394,1530849..1531180))
location: region:1530166-1531180:-1
so has part: feature:1530849-1531180:-1:exon
so has part: feature:1530166-1530394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1530849-1531180:-1:exon

position:1530849:-1
position: 1530849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1530166-1530394:-1:exon

position:1530394:-1
position: 1530394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120410768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC120410768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGKHFGNLARVRHVITYSLSPFEQRAFPNVLSHGLPNVGRRFTSQVLKVVPPLATGYLIYSWGTQEFERLKRKNAAGHEHEQ
SIO_010081: LOC120410768
subclass of: SO_0000673
so part of: LOC120410768
location: complement(join(1530300..1530394,1530849..1531002))
location: region:1530300-1531002:-1
so has part: feature:1530849-1531002:-1:exon
so has part: feature:1530300-1530394:-1:exon

XP_039415861.1
type: Protein
SIO_000068: ncbiprotein

position:1530300:-1
position: 1530300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531002:-1
position: 1531002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530849-1531002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530300-1530394:-1:exon

GDF9
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1531771..1536201)
location: region:1531771-1536201:-1
so has part: feature:1531771-1536201:-1:exon
subclass of: SO_0000010

104689485
type: Gene
SIO_000068: ncbigene

position:1531771:-1
position: 1531771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536201:-1
position: 1536201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531771-1536201:-1:exon

GDF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GDF9
product: growth differentiation factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019286109.3
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1531771..1534542,1535607..1536201))
location: region:1531771-1536201:-1
so has part: feature:1535607-1536201:-1:exon
so has part: feature:1531771-1534542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1535607-1536201:-1:exon

position:1535607:-1
position: 1535607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531771-1534542:-1:exon

position:1534542:-1
position: 1534542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MESTWRICVCLYCCLPWLSSGTQYSPRSRGRGGSEKAPGFSAAPEDAARELSAVLQLPQGGGPAPTLLPPLLKVLHGRGPRGWHSEAPRLQPDSRALRYMKRLYRMSATREGIPKAHRGRFYNTVRLFTPCWECQHRLGGLGKGDVHSVDLLFNLDRVTALEHLLKSVLLYSFDTSVPISSSITCICHLSLKEHDSSSQVCPSISHSLALSLHFDVRKRKWVEMDVTSFLQPLIATNRRNVHMALNFTCLMGDPQQSTKLQNAVNVTLVPPSLLLYLNDTSEQAYHRGSLLRHRRKSPAWARQSSSPLVDPPKGDKGQGNPQGKRASRQRRNENPKAAPATSPHNLSEYLKQFVFPQHECELHNFRLSFSQLRWDRWIIAPHRYSPQFCRGDCPRALGHRYGSPVHAMVQTLIYERLDPSVPRPSCVPAAYSPLSVLTIEPDGSIAYKEYEDMIATKCTCR
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1533587..1534542,1535607..1536036))
location: region:1533587-1536036:-1
so has part: feature:1535607-1536036:-1:exon
so has part: feature:1533587-1534542:-1:exon

XP_019141654.2
type: Protein
SIO_000068: ncbiprotein

position:1533587:-1
position: 1533587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536036:-1
position: 1536036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535607-1536036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1533587-1534542:-1:exon

C1QTNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1540186..1545894
location: region:1540186-1545894:1
so has part: feature:1540186-1545894:1:exon
subclass of: SO_0000010

104689635
type: Gene
SIO_000068: ncbigene

position:1540186:1
position: 1540186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545894:1
position: 1545894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540186-1545894:1:exon

C1QTNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: C1QTNF2
product: C1q and TNF related 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_019286113.2
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(1540186..1540764,1543428..1543741,1544941..1545894)
location: region:1540186-1545894:1
so has part: feature:1540186-1540764:1:exon
so has part: feature:1543428-1543741:1:exon
so has part: feature:1544941-1545894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1540186-1540764:1:exon

position:1540764:1
position: 1540764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1543428-1543741:1:exon

position:1543428:1
position: 1543428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543741:1
position: 1543741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1544941-1545894:1:exon

position:1544941:1
position: 1544941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q tumor necrosis factor-related protein 2
translation: MPVVPTRCSHVRLLPTGRAMISAVLLLWTVPCVANHILGGFARRELQEGAQLACSLPGPPGPPGPPGVPGTPGTVGRMGFPGKDGKDGQDGEKGEHGDEGPQGRTGNPGKPGPKGKTGAIGKAGPRGPKGLKGSPGKNGAPGKKGPKGSQGDPGLPGACSCSGSKAKSAFSVAVSKSYPRERLPIKFDRILMNEGGHYNASSGKFICSIPGIYYFTYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTILALKQEDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYPDQDYLNEV
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(1543444..1543741,1544941..1545554)
location: region:1543444-1545554:1
so has part: feature:1543444-1543741:1:exon
so has part: feature:1544941-1545554:1:exon

XP_019141658.2
type: Protein
SIO_000068: ncbiprotein

position:1543444:1
position: 1543444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545554:1
position: 1545554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543444-1543741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1544941-1545554:1:exon

FABP6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1546845..1548769)
location: region:1546845-1548769:-1
so has part: feature:1546845-1548769:-1:exon
subclass of: SO_0000010

104689486
type: Gene
SIO_000068: ncbigene

position:1546845:-1
position: 1546845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548769:-1
position: 1548769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546845-1548769:-1:exon

FABP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FABP6
product: fatty acid binding protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010399609.4
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(1546845..1546935,1547125..1547214,1547688..1547863,1548695..1548769))
location: region:1546845-1548769:-1
so has part: feature:1548695-1548769:-1:exon
so has part: feature:1547688-1547863:-1:exon
so has part: feature:1547125-1547214:-1:exon
so has part: feature:1546845-1546935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548695-1548769:-1:exon

position:1548695:-1
position: 1548695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547688-1547863:-1:exon

position:1547688:-1
position: 1547688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547863:-1
position: 1547863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1547125-1547214:-1:exon

position:1547125:-1
position: 1547125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547214:-1
position: 1547214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1546845-1546935:-1:exon

position:1546935:-1
position: 1546935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FABP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrotropin
translation: MAFAGKYEFEGDENYDAFVQKIGLPSDKVEMGRNCKIVTEVVQNGNDFTWTQHFPGGHSTTNSFTVGKEADMETMGGKKFKATVKMEDGKLVADFPNYRHTAEISGGKLVEISTSSGVVYKRTSKKIA
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(1546882..1546935,1547125..1547214,1547688..1547863,1548695..1548761))
location: region:1546882-1548761:-1
so has part: feature:1548695-1548761:-1:exon
so has part: feature:1547688-1547863:-1:exon
so has part: feature:1547125-1547214:-1:exon
so has part: feature:1546882-1546935:-1:exon

XP_010397911.1
type: Protein
SIO_000068: ncbiprotein

position:1546882:-1
position: 1546882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548761:-1
position: 1548761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548695-1548761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1547688-1547863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547125-1547214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546882-1546935:-1:exon

PWWP2A
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1565828..1590097
location: region:1565828-1590097:1
so has part: feature:1565828-1590097:1:exon
subclass of: SO_0000010

104689488
type: Gene
SIO_000068: ncbigene

position:1565828:1
position: 1565828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590097:1
position: 1590097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565828-1590097:1:exon

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PWWP2A
product: PWWP domain containing 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039559406.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1565828..1566524,1576833..1578539,1587457..1590097)
location: region:1565828-1590097:1
so has part: feature:1565828-1566524:1:exon
so has part: feature:1576833-1578539:1:exon
so has part: feature:1587457-1590097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565828-1566524:1:exon

position:1566524:1
position: 1566524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1576833-1578539:1:exon

position:1576833:1
position: 1576833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578539:1
position: 1578539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1587457-1590097:1:exon

position:1587457:1
position: 1587457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PWWP2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PWWP domain-containing protein 2A
translation: MAAMAAEAAATAAVPGDGGAGEAEPEMEPIPGSEAGADPLPAVSEAVESAVPDGEEADGGKAEEPPPVQRARSPGGTREPDAGRTEEPPPPRSPGVESPRAEPRAAPSPGCSEPPQPCPPPEPAREPPQPCPPAAGGSAGPGEEPPRPEEEEPDAAAAAAVEPEPAVPAVPGGGEAEAPALLPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKPFQEEAQVKCEANAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAGEAPSETQSPSEGPEEASSEVQDTSEVHVTVDQDEQQTLGKRGSKSNITVYMTLNQKKSDSSSASVCSSDSTDDLKSTNSECSSTESFDFPPGSMHAPSSSSSSSSSSSKEEKKLSNSLKTEVFSKNVSKCVTPDGRTVCVGDIVWAKIYGFPWWPARILTITVSRKDTGLLVRQEARISWFGSTTTSFLALAQLSPFLESFQLRFNKKRKGLYRKAVTEAAKAAKQLTPEVRALLTQFET
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1565865..1566524,1576833..1578525)
location: region:1565865-1578525:1
so has part: feature:1565865-1566524:1:exon
so has part: feature:1576833-1578525:1:exon

XP_039415340.1
type: Protein
SIO_000068: ncbiprotein

position:1565865:1
position: 1565865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578525:1
position: 1578525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565865-1566524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576833-1578525:1:exon

TTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1596282..1616900)
location: region:1596282-1616900:-1
so has part: feature:1596282-1616900:-1:exon
subclass of: SO_0000010

104689487
type: Gene
SIO_000068: ncbigene

position:1596282:-1
position: 1596282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616900:-1
position: 1616900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596282-1616900:-1:exon

TTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TTC1
product: tetratricopeptide repeat domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039559407.1
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1596282..1597446,1601867..1601921,1603895..1604043,1605763..1605799,1606026..1606138,1607278..1607338,1615367..1615693,1616795..1616900))
location: region:1596282-1616900:-1
so has part: feature:1616795-1616900:-1:exon
so has part: feature:1615367-1615693:-1:exon
so has part: feature:1607278-1607338:-1:exon
so has part: feature:1606026-1606138:-1:exon
so has part: feature:1605763-1605799:-1:exon
so has part: feature:1603895-1604043:-1:exon
so has part: feature:1601867-1601921:-1:exon
so has part: feature:1596282-1597446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1616795-1616900:-1:exon

position:1616795:-1
position: 1616795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1615367-1615693:-1:exon

position:1615367:-1
position: 1615367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615693:-1
position: 1615693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1607278-1607338:-1:exon

position:1607278:-1
position: 1607278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607338:-1
position: 1607338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1606026-1606138:-1:exon

position:1606026:-1
position: 1606026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606138:-1
position: 1606138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1605763-1605799:-1:exon

position:1605763:-1
position: 1605763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605799:-1
position: 1605799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1603895-1604043:-1:exon

position:1603895:-1
position: 1603895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604043:-1
position: 1604043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1601867-1601921:-1:exon

position:1601867:-1
position: 1601867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601921:-1
position: 1601921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1596282-1597446:-1:exon

position:1597446:-1
position: 1597446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TTC1
product: tetratricopeptide repeat domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_039559408.1
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1596282..1597446,1601867..1601921,1603895..1604043,1605763..1605799,1606026..1606138,1607278..1607338,1615367..1615693,1616402..1616590))
location: region:1596282-1616590:-1
so has part: feature:1616402-1616590:-1:exon
so has part: feature:1615367-1615693:-1:exon
so has part: feature:1607278-1607338:-1:exon
so has part: feature:1606026-1606138:-1:exon
so has part: feature:1605763-1605799:-1:exon
so has part: feature:1603895-1604043:-1:exon
so has part: feature:1601867-1601921:-1:exon
so has part: feature:1596282-1597446:-1:exon

position:1616590:-1
position: 1616590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1616402-1616590:-1:exon

position:1616402:-1
position: 1616402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1615367-1615693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1607278-1607338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1606026-1606138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1605763-1605799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603895-1604043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1601867-1601921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596282-1597446:-1:exon

TTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 1
translation: MEEFKDASLPDELLNHMKLSDQKCPETGPSDAQHPQSFGSGCASSPGQDPTEESFHDCQDSFEAKGPVLDDEGNVQDEGSSSRKQTELDEEYLLELEKDMPEEEKQKRRKESKGLKEKGNEHFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALTDCTKAVELDPHYVRALLRRAELYEKTEKLDEALEDYKAVLERDQSVHQAREACMRLPQQIEERNEKLKKEMLDKLKDLGNLVLRPFGLSTENFQVKQDSSTGSYSINFVQNPNNNR
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1597313..1597446,1601867..1601921,1603895..1604043,1605763..1605799,1606026..1606138,1607278..1607338,1615367..1615684))
location: region:1597313-1615684:-1
so has part: feature:1615367-1615684:-1:exon
so has part: feature:1607278-1607338:-1:exon
so has part: feature:1606026-1606138:-1:exon
so has part: feature:1605763-1605799:-1:exon
so has part: feature:1603895-1604043:-1:exon
so has part: feature:1601867-1601921:-1:exon
so has part: feature:1597313-1597446:-1:exon

XP_039415341.1
type: Protein
SIO_000068: ncbiprotein

position:1597313:-1
position: 1597313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615684:-1
position: 1615684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1615367-1615684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1607278-1607338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1606026-1606138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1605763-1605799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603895-1604043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1601867-1601921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1597313-1597446:-1:exon

TTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 1
translation: MEEFKDASLPDELLNHMKLSDQKCPETGPSDAQHPQSFGSGCASSPGQDPTEESFHDCQDSFEAKGPVLDDEGNVQDEGSSSRKQTELDEEYLLELEKDMPEEEKQKRRKESKGLKEKGNEHFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALTDCTKAVELDPHYVRALLRRAELYEKTEKLDEALEDYKAVLERDQSVHQAREACMRLPQQIEERNEKLKKEMLDKLKDLGNLVLRPFGLSTENFQVKQDSSTGSYSINFVQNPNNNR
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1597313..1597446,1601867..1601921,1603895..1604043,1605763..1605799,1606026..1606138,1607278..1607338,1615367..1615684))
location: region:1597313-1615684:-1
so has part: feature:1615367-1615684:-1:exon
so has part: feature:1607278-1607338:-1:exon
so has part: feature:1606026-1606138:-1:exon
so has part: feature:1605763-1605799:-1:exon
so has part: feature:1603895-1604043:-1:exon
so has part: feature:1601867-1601921:-1:exon
so has part: feature:1597313-1597446:-1:exon

XP_039415342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1615367-1615684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1607278-1607338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1606026-1606138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1605763-1605799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603895-1604043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1601867-1601921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1597313-1597446:-1:exon

ADRA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1621226..1633445)
location: region:1621226-1633445:-1
so has part: feature:1621226-1633445:-1:exon
subclass of: SO_0000010

104689636
type: Gene
SIO_000068: ncbigene

position:1621226:-1
position: 1621226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633445:-1
position: 1633445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621226-1633445:-1:exon

ADRA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ADRA1B
product: adrenoceptor alpha 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_019286008.2
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(1621226..1622061,1631688..1633445))
location: region:1621226-1633445:-1
so has part: feature:1631688-1633445:-1:exon
so has part: feature:1621226-1622061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1631688-1633445:-1:exon

position:1631688:-1
position: 1631688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1621226-1622061:-1:exon

position:1622061:-1
position: 1622061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1B adrenergic receptor
translation: MVFKMNTHLDDKSNTSIPGYFKGSALNYGNFSANNSNETGSNLDSPALATSRAIIVGLILGAFILFAIIGNILVILSVACNRHLRIPTNYFIINLAIADLLLSFTVLPFSATLEVLGYWALGRIFCDIWAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLVTRRRAILALLGVWVLSMVISIGPLLGWKEPAPQDDRECRITEEPFYALFSSLGSFYIPLIVILVMYCRVYIVAKRTTRNLEAGVMKEMSNSKELTLRIHYKHEDTLNNTKSKGHNPRNSLAFKLLKFSREKKAAKTLGIVVGMFILCWLPFFIVLPLGSLFSALKPPETIFKVIFWLGYFNSCLNPIIYPCSSKEFKRAFIQILRCQCHRRKQLGWWPYSYRNWNRCSFEHARKDSLEDSGSFLSGSQRTLSSASPSPGYVSRISHPELELCTLQEQRQCRFFTFQLPPERNGHGPAAGRGAADAPRGSP
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(1621601..1622061,1631688..1632654))
location: region:1621601-1632654:-1
so has part: feature:1631688-1632654:-1:exon
so has part: feature:1621601-1622061:-1:exon

XP_019141553.2
type: Protein
SIO_000068: ncbiprotein

position:1621601:-1
position: 1621601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632654:-1
position: 1632654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631688-1632654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1621601-1622061:-1:exon

IL12B
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1697928..1707993
location: region:1697928-1707993:1
so has part: feature:1697928-1707993:1:exon
subclass of: SO_0000010

104689490
type: Gene
SIO_000068: ncbigene

position:1697928:1
position: 1697928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707993:1
position: 1707993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1697928-1707993:1:exon

IL12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IL12B
product: interleukin 12B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039559748.1
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(1697928..1698024,1698880..1699293,1702283..1702367,1703231..1703506,1704279..1704396,1705240..1705433,1706169..1706314,1707525..1707993)
location: region:1697928-1707993:1
so has part: feature:1697928-1698024:1:exon
so has part: feature:1698880-1699293:1:exon
so has part: feature:1702283-1702367:1:exon
so has part: feature:1703231-1703506:1:exon
so has part: feature:1704279-1704396:1:exon
so has part: feature:1705240-1705433:1:exon
so has part: feature:1706169-1706314:1:exon
so has part: feature:1707525-1707993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1697928-1698024:1:exon

position:1698024:1
position: 1698024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1698880-1699293:1:exon

position:1698880:1
position: 1698880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699293:1
position: 1699293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1702283-1702367:1:exon

position:1702283:1
position: 1702283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702367:1
position: 1702367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1703231-1703506:1:exon

position:1703231:1
position: 1703231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703506:1
position: 1703506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1704279-1704396:1:exon

position:1704279:1
position: 1704279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704396:1
position: 1704396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1705240-1705433:1:exon

position:1705240:1
position: 1705240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705433:1
position: 1705433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1706169-1706314:1:exon

position:1706169:1
position: 1706169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706314:1
position: 1706314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1707525-1707993:1:exon

position:1707525:1
position: 1707525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-12 subunit beta
translation: MSHLLHALLSLLSFAALLESAQWKLQENVFVIESQWNAEAPATTVELTCNTSEEAVYWKKDSEWKQEGKTLTAAVKEFPDAGNYTCLSQESHEVLDSNLLLIAKIDSKGQMMRWILKSFQEPKWTFLKCEAKNYSGIFTCSWMTENNSPNVKFTIRSLKGPQGDVSCSSPVPHTEGALTMYTAQCHKENFCAFAEEHQPIDIFLEVIDEVEYENYTASFFIRDIIKPDPPQCQYVATNGTVTWTYPRTWSTPNSYFPLTFKVKVKSTKRHKYQVYDTDEQSVQLPAPGPAEVSVQARDRCYLSSWSEWSSLCR
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(1702283..1702367,1703231..1703506,1704279..1704396,1705240..1705433,1706169..1706314,1707525..1707647)
location: region:1702283-1707647:1
so has part: feature:1702283-1702367:1:exon
so has part: feature:1703231-1703506:1:exon
so has part: feature:1704279-1704396:1:exon
so has part: feature:1705240-1705433:1:exon
so has part: feature:1706169-1706314:1:exon
so has part: feature:1707525-1707647:1:exon

XP_039415682.1
type: Protein
SIO_000068: ncbiprotein

position:1707647:1
position: 1707647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702283-1702367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1703231-1703506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1704279-1704396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705240-1705433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706169-1706314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1707525-1707647:1:exon

SPINK9
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SPINK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1712597..1719020
location: region:1712597-1719020:1
so has part: feature:1712597-1719020:1:exon
subclass of: SO_0000010

104689491
type: Gene
SIO_000068: ncbigene

position:1712597:1
position: 1712597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719020:1
position: 1719020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712597-1719020:1:exon

SPINK9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPINK9
product: serine peptidase inhibitor Kazal type 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010399615.4
SIO_010081: SPINK9
subclass of: SO_0000673
so part of: SPINK9
location: join(1712597..1712656,1714592..1714898,1716993..1717012,1717896..1718023,1718500..1719020)
location: region:1712597-1719020:1
so has part: feature:1712597-1712656:1:exon
so has part: feature:1714592-1714898:1:exon
so has part: feature:1716993-1717012:1:exon
so has part: feature:1717896-1718023:1:exon
so has part: feature:1718500-1719020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712597-1712656:1:exon

position:1712656:1
position: 1712656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1714592-1714898:1:exon

position:1714592:1
position: 1714592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714898:1
position: 1714898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1716993-1717012:1:exon

position:1716993:1
position: 1716993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717012:1
position: 1717012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1717896-1718023:1:exon

position:1717896:1
position: 1717896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718023:1
position: 1718023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1718500-1719020:1:exon

position:1718500:1
position: 1718500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPINK9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPINK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 9
translation: MEVTWMPTPSVATSEQTHFLAGFSQEQSLLHQHGTPSPAPCPYPAPCTGHIPLTLPTATPSLITCTGISSPAPGYKLLPHSHGHTGDTAGTRERLWDSQGLVFAMKVTGTFVLLALAALCLAHGAEQNEVDCSEYRRLERGRPIYCERLYQPFCGSDGKTYNNKCSFCKAVLRSGGALHMKQAGAC
SIO_010081: SPINK9
subclass of: SO_0000673
so part of: SPINK9
location: join(1712597..1712656,1714592..1714898,1716993..1717012,1717896..1718023,1718500..1718545)
location: region:1712597-1718545:1
so has part: feature:1712597-1712656:1:exon
so has part: feature:1714592-1714898:1:exon
so has part: feature:1716993-1717012:1:exon
so has part: feature:1717896-1718023:1:exon
so has part: feature:1718500-1718545:1:exon

XP_010397917.2
type: Protein
SIO_000068: ncbiprotein

position:1718545:1
position: 1718545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712597-1712656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1714592-1714898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1716993-1717012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717896-1718023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718500-1718545:1:exon

FBXO38
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1721895..1742196
location: region:1721895-1742196:1
so has part: feature:1721895-1742196:1:exon
subclass of: SO_0000010

104689492
type: Gene
SIO_000068: ncbigene

position:1721895:1
position: 1721895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742196:1
position: 1742196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1721895-1742196:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FBXO38
product: F-box protein 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_039559604.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1721895..1721989,1724088..1724232,1725282..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1742196)
location: region:1721895-1742196:1
so has part: feature:1721895-1721989:1:exon
so has part: feature:1724088-1724232:1:exon
so has part: feature:1725282-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1742196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1721895-1721989:1:exon

position:1721989:1
position: 1721989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1724088-1724232:1:exon

position:1724088:1
position: 1724088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724232:1
position: 1724232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1725282-1725415:1:exon

position:1725282:1
position: 1725282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725415:1
position: 1725415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1726490-1726653:1:exon

position:1726490:1
position: 1726490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726653:1
position: 1726653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1726988-1727153:1:exon

position:1726988:1
position: 1726988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727153:1
position: 1727153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1727486-1727623:1:exon

position:1727486:1
position: 1727486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727623:1
position: 1727623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1727899-1728036:1:exon

position:1727899:1
position: 1727899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728036:1
position: 1728036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1728397-1728490:1:exon

position:1728397:1
position: 1728397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728490:1
position: 1728490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1728762-1728892:1:exon

position:1728762:1
position: 1728762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728892:1
position: 1728892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1729155-1729325:1:exon

position:1729155:1
position: 1729155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729325:1
position: 1729325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1729570-1729712:1:exon

position:1729570:1
position: 1729570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729712:1
position: 1729712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1730548-1730770:1:exon

position:1730548:1
position: 1730548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730770:1
position: 1730770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1731379-1731498:1:exon

position:1731379:1
position: 1731379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731498:1
position: 1731498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1732160-1732339:1:exon

position:1732160:1
position: 1732160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732339:1
position: 1732339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1733598-1734287:1:exon

position:1733598:1
position: 1733598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734287:1
position: 1734287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1735955-1736055:1:exon

position:1735955:1
position: 1735955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736055:1
position: 1736055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1736232-1736334:1:exon

position:1736232:1
position: 1736232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736334:1
position: 1736334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1737289-1737455:1:exon

position:1737289:1
position: 1737289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737455:1
position: 1737455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1738512-1738657:1:exon

position:1738512:1
position: 1738512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738657:1
position: 1738657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1740175-1740278:1:exon

position:1740175:1
position: 1740175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740278:1
position: 1740278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1740486-1740599:1:exon

position:1740486:1
position: 1740486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740599:1
position: 1740599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1741565-1742196:1:exon

position:1741565:1
position: 1741565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FBXO38
product: F-box protein 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039559603.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1721895..1721989,1724091..1724232,1725282..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1742196)
location: region:1721895-1742196:1
so has part: feature:1721895-1721989:1:exon
so has part: feature:1724091-1724232:1:exon
so has part: feature:1725282-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1742196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1721895-1721989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1724091-1724232:1:exon

position:1724091:1
position: 1724091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1725282-1725415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726490-1726653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1741565-1742196:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FBXO38
product: F-box protein 38, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_010399619.4
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724088..1724232,1725282..1725415,1726566..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1742196)
location: region:1724088-1742196:1
so has part: feature:1724088-1724232:1:exon
so has part: feature:1725282-1725415:1:exon
so has part: feature:1726566-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1742196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724088-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725282-1725415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726566-1726653:1:exon

position:1726566:1
position: 1726566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1742196:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRRKTVKASAVSREGAGSTKAEEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSMQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724105..1724232,1725282..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1741743)
location: region:1724105-1741743:1
so has part: feature:1724105-1724232:1:exon
so has part: feature:1725282-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1741743:1:exon

XP_039415537.1
type: Protein
SIO_000068: ncbiprotein

position:1724105:1
position: 1724105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741743:1
position: 1741743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724105-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725282-1725415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726490-1726653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1741743:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRRKTVKASAVSREGAGSTKAEEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSMQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724105..1724232,1725282..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1741743)
location: region:1724105-1741743:1
so has part: feature:1724105-1724232:1:exon
so has part: feature:1725282-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1741743:1:exon

XP_039415538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1724105-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725282-1725415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726490-1726653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1741743:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FBXO38
product: F-box protein 38, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_010399618.4
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724120..1724232,1725298..1725415,1726566..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1742196)
location: region:1724120-1742196:1
so has part: feature:1724120-1724232:1:exon
so has part: feature:1725298-1725415:1:exon
so has part: feature:1726566-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1742196:1:exon

position:1724120:1
position: 1724120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724120-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725298-1725415:1:exon

position:1725298:1
position: 1725298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1726566-1726653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1742196:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FBXO38
product: F-box protein 38, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_010399617.4
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724145..1724232,1725298..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1742196)
location: region:1724145-1742196:1
so has part: feature:1724145-1724232:1:exon
so has part: feature:1725298-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1742196:1:exon

position:1724145:1
position: 1724145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724145-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725298-1725415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726490-1726653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1742196:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X3
translation: MRCFATSLGYHVHGMPVPEAEGGGDAVPARGEGGGSVCGALVGVHAHRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSMQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1724208..1724232,1725298..1725415,1726566..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1741743)
location: region:1724208-1741743:1
so has part: feature:1724208-1724232:1:exon
so has part: feature:1725298-1725415:1:exon
so has part: feature:1726566-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1741743:1:exon

XP_010397920.3
type: Protein
SIO_000068: ncbiprotein

position:1724208:1
position: 1724208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724208-1724232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1725298-1725415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726566-1726653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1741565-1741743:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X2
translation: MCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSMQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1725304..1725415,1726490..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1741743)
location: region:1725304-1741743:1
so has part: feature:1725304-1725415:1:exon
so has part: feature:1726490-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1741743:1:exon

XP_010397919.2
type: Protein
SIO_000068: ncbiprotein

position:1725304:1
position: 1725304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725304-1725415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1726490-1726653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1741565-1741743:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X4
translation: MPVPEAEGGGDAVPARGEGGGSVCGALVGVHAHRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSMQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1725315..1725415,1726566..1726653,1726988..1727153,1727486..1727623,1727899..1728036,1728397..1728490,1728762..1728892,1729155..1729325,1729570..1729712,1730548..1730770,1731379..1731498,1732160..1732339,1733598..1734287,1735955..1736055,1736232..1736334,1737289..1737455,1738512..1738657,1740175..1740278,1740486..1740599,1741565..1741743)
location: region:1725315-1741743:1
so has part: feature:1725315-1725415:1:exon
so has part: feature:1726566-1726653:1:exon
so has part: feature:1726988-1727153:1:exon
so has part: feature:1727486-1727623:1:exon
so has part: feature:1727899-1728036:1:exon
so has part: feature:1728397-1728490:1:exon
so has part: feature:1728762-1728892:1:exon
so has part: feature:1729155-1729325:1:exon
so has part: feature:1729570-1729712:1:exon
so has part: feature:1730548-1730770:1:exon
so has part: feature:1731379-1731498:1:exon
so has part: feature:1732160-1732339:1:exon
so has part: feature:1733598-1734287:1:exon
so has part: feature:1735955-1736055:1:exon
so has part: feature:1736232-1736334:1:exon
so has part: feature:1737289-1737455:1:exon
so has part: feature:1738512-1738657:1:exon
so has part: feature:1740175-1740278:1:exon
so has part: feature:1740486-1740599:1:exon
so has part: feature:1741565-1741743:1:exon

XP_010397921.3
type: Protein
SIO_000068: ncbiprotein

position:1725315:1
position: 1725315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725315-1725415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1726566-1726653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726988-1727153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1727486-1727623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727899-1728036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728397-1728490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728762-1728892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1729155-1729325:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729570-1729712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1730548-1730770:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1731379-1731498:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1732160-1732339:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1733598-1734287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1735955-1736055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1736232-1736334:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1737289-1737455:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1738512-1738657:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1740175-1740278:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1740486-1740599:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1741565-1741743:1:exon

HTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1746325..1816894)
location: region:1746325-1816894:-1
so has part: feature:1746325-1816894:-1:exon
subclass of: SO_0000010

104689493
type: Gene
SIO_000068: ncbigene

position:1746325:-1
position: 1746325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816894:-1
position: 1816894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746325-1816894:-1:exon

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010399620.4
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1746325..1748981,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795091,1816707..1816894))
location: region:1746325-1816894:-1
so has part: feature:1816707-1816894:-1:exon
so has part: feature:1795010-1795091:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1746325-1748981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1816707-1816894:-1:exon

position:1816707:-1
position: 1816707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1795010-1795091:-1:exon

position:1795010:-1
position: 1795010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795091:-1
position: 1795091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1781946-1782071:-1:exon

position:1781946:-1
position: 1781946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782071:-1
position: 1782071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1780853-1781053:-1:exon

position:1780853:-1
position: 1780853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781053:-1
position: 1781053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1772694-1772847:-1:exon

position:1772694:-1
position: 1772694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772847:-1
position: 1772847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1771383-1772014:-1:exon

position:1771383:-1
position: 1771383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772014:-1
position: 1772014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1746325-1748981:-1:exon

position:1748981:-1
position: 1748981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010399621.4
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1746325..1748981,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795091,1804176..1804316,1816707..1816894))
location: region:1746325-1816894:-1
so has part: feature:1816707-1816894:-1:exon
so has part: feature:1804176-1804316:-1:exon
so has part: feature:1795010-1795091:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1746325-1748981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1816707-1816894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804176-1804316:-1:exon

position:1804176:-1
position: 1804176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804316:-1
position: 1804316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1795010-1795091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1746325-1748981:-1:exon

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4 isoform X1
translation: MEELDVNVSSSEGFGIAEKIVLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWIYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPAEPRQQPQEPRQHPQEPQQHPQEPRQHPPDQHSTHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHNGHHQEQEKLPIHTDPESQESCF
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1748894..1748981,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795035))
location: region:1748894-1795035:-1
so has part: feature:1795010-1795035:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1748894-1748981:-1:exon

XP_010397922.1
type: Protein
SIO_000068: ncbiprotein

position:1748894:-1
position: 1748894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795035:-1
position: 1795035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795010-1795035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1748894-1748981:-1:exon

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4 isoform X1
translation: MEELDVNVSSSEGFGIAEKIVLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWIYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPAEPRQQPQEPRQHPQEPQQHPQEPRQHPPDQHSTHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHNGHHQEQEKLPIHTDPESQESCF
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1748894..1748981,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795035))
location: region:1748894-1795035:-1
so has part: feature:1795010-1795035:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1748894-1748981:-1:exon

XP_010397923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1795010-1795035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1748894-1748981:-1:exon

HTR4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_751833.3
SIO_010081: HTR4
so part of: HTR4
location: complement(join(1748897..1748981,1749658..1749835,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795091,1816707..1816894))
location: region:1748897-1816894:-1
so has part: feature:1816707-1816894:-1:exon
so has part: feature:1795010-1795091:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1749658-1749835:-1:exon
so has part: feature:1748897-1748981:-1:exon

position:1748897:-1
position: 1748897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816707-1816894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1795010-1795091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1749658-1749835:-1:exon

position:1749658:-1
position: 1749658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749835:-1
position: 1749835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1748897-1748981:-1:exon

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010399623.3
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1762331..1762712,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795091,1816707..1816894))
location: region:1762331-1816894:-1
so has part: feature:1816707-1816894:-1:exon
so has part: feature:1795010-1795091:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1762331-1762712:-1:exon

position:1762331:-1
position: 1762331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816707-1816894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1795010-1795091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762331-1762712:-1:exon

position:1762712:-1
position: 1762712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4 isoform X2
translation: MEELDVNVSSSEGFGIAEKIVLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWIYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPAEPRQQPQEPRQHPQEPQQHPQEPRQHPPDQHSTHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSILGQTVPCSTTTINGSTHVLSGCSSVSKLLLLLCSRPAPV
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1762652..1762712,1771383..1772014,1772694..1772847,1780853..1781053,1781946..1782071,1795010..1795035))
location: region:1762652-1795035:-1
so has part: feature:1795010-1795035:-1:exon
so has part: feature:1781946-1782071:-1:exon
so has part: feature:1780853-1781053:-1:exon
so has part: feature:1772694-1772847:-1:exon
so has part: feature:1771383-1772014:-1:exon
so has part: feature:1762652-1762712:-1:exon

XP_010397925.1
type: Protein
SIO_000068: ncbiprotein

position:1762652:-1
position: 1762652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795010-1795035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781946-1782071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780853-1781053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772694-1772847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771383-1772014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762652-1762712:-1:exon

LOC104689637
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1827515..1830216)
location: region:1827515-1830216:-1
so has part: feature:1827515-1830216:-1:exon
subclass of: SO_0000010

104689637
type: Gene
SIO_000068: ncbigene

position:1827515:-1
position: 1827515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830216:-1
position: 1830216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1827515-1830216:-1:exon

LOC104689637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689637
product: sulfate transporter-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010399866.4
SIO_010081: LOC104689637
subclass of: SO_0000673
so part of: LOC104689637
location: complement(join(1827515..1829138,1829581..1830216))
location: region:1827515-1830216:-1
so has part: feature:1829581-1830216:-1:exon
so has part: feature:1827515-1829138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1829581-1830216:-1:exon

position:1829581:-1
position: 1829581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827515-1829138:-1:exon

position:1829138:-1
position: 1829138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter-like
translation: MPACHSCPGAMEDASSQEPALSKDTPGSFQPQEPPATFVTLEEYEPRGFSAKEFIVEKARAACTCSPQSLSTALRRLFPVLDWLPRYNLRAQLLGDIISGLLVGIVAIPQSISYSLLANQDPIYGIYTNFFCNIIYAATATSRHACVGSFGVLCLMVGQSVTRHLQLAGYGDSSAALGGNSSSPRNGTEACDRSCYAITVALSLSFLVGLYQILLGVLQLGFVAVYLSEPLLGGFVTGSSLTIITSQMKYLLGLKIPRHEGVGSFILTWVDLFTYIHNTNICDLLTSLVALAIIVPVKELNERYKERMKAPFPIELLVVIVATLISHYFDFEQRYKAAVCGDIPTGFRKPTVPDISLFPSLAMDALPIAVIGFAMTVSLAEIFGKKHGYAVSANQEMIAIGMCNLIPSFFYCFASSAALTKTLLKESTGSQTQVSGLVTSLVLLLVLLWISPLFYSLQTSILGVVTIVNLRGGLRKFRDTPRMWQLSKLDTVVWWTTMLCSTLVTTEIGLLVGVCFALLCIIFRTQRPRATLLGKVSNREIYEDQGTYKQLSSIANVKIFRFESSLYYANKDYFKAVLYQKTRVNPVLLRAQAHTDTGSSKDFWGTGFGCLKQAGRRAEQPPADSCPPSTDMHTLILDCGAMQFIDTVGLSVLKETHHDYKQVGVQVLLANCNPSIRQRLREGGWAGEAGSAGGQLPFHSIHDAVQFAERWHQGESEDKQDGPPDPVDLNFQVSL
SIO_010081: LOC104689637
subclass of: SO_0000673
so part of: LOC104689637
location: complement(join(1827567..1829138,1829581..1830216))
location: region:1827567-1830216:-1
so has part: feature:1829581-1830216:-1:exon
so has part: feature:1827567-1829138:-1:exon

XP_010398168.4
type: Protein
SIO_000068: ncbiprotein

position:1827567:-1
position: 1827567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829581-1830216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1827567-1829138:-1:exon

SLC26A2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SLC26A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1837977..1854605)
location: region:1837977-1854605:-1
so has part: feature:1837977-1854605:-1:exon
subclass of: SO_0000010

104689495
type: Gene
SIO_000068: ncbigene

position:1837977:-1
position: 1837977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854605:-1
position: 1854605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1837977-1854605:-1:exon

SLC26A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SLC26A2
product: solute carrier family 26 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_010399624.4
SIO_010081: SLC26A2
subclass of: SO_0000673
so part of: SLC26A2
location: complement(join(1837977..1846011,1847747..1848391,1853622..1854605))
location: region:1837977-1854605:-1
so has part: feature:1853622-1854605:-1:exon
so has part: feature:1847747-1848391:-1:exon
so has part: feature:1837977-1846011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1853622-1854605:-1:exon

position:1853622:-1
position: 1853622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1847747-1848391:-1:exon

position:1847747:-1
position: 1847747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848391:-1
position: 1848391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1837977-1846011:-1:exon

position:1846011:-1
position: 1846011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC26A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SLC26A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MAVMTETSNIHAVTGGPEGDDAKCGFRHRMFLEPQEEKKSMKALLLKQAKKTCSCTPAKIKDCVLGFFPILQWLPKYKLGEYLLGDIMSGVIVGVLLVPQSIAYSLLAGLEPIYGLYTSFFACIIYCIFGTSRHISVGIFGVVCLMVGQVVDREVERAGYDLEPAVLSALPGPGGDGNSTGNGTAPQPLCDKSCYAMAVAATMTFISGVYQVAMGLFQVGFVSVYLSDSLLSGFVTGASFTVLTSQVKYLLGLDIPRSGGVGSFITTWINIFRNIHRTNICDLITSSLCFLVLIPSKELNERFKSKLKAPIPVELFVVVAATLASHFGKLRETYGSSVSGHIPTGFLPPRPPDWALIPNVALDAIPIAIIGFAITVSLSEMFAKKHGYSVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCRTQVSGIVTSLVILLVLLVIAPLFYSLQKCVLAVITIVNLRGALRKFRDLPKMWHLSRVDTVIWGVTMAATALISTEIGLLVGVCFSMLCVIFRTQRPEAPLLGWVAESETYESLSAYKNLQTKPGVVVFRFEAPLYYINKECFKSTLYKQTGVNPVGVKAAEKKAAKRMLREKEVGSGDNQSSVPVDFGSGPVGFHTIVIDCCAVQFLDTAGIRTLKEVCKDYEDIGVHVLLAQCNPSVRSSLLRGEFFKEGEDHLLFHSVHQAVDFALGTQGHGASKN
SIO_010081: SLC26A2
subclass of: SO_0000673
so part of: SLC26A2
location: complement(join(1844515..1846011,1847747..1848379))
location: region:1844515-1848379:-1
so has part: feature:1847747-1848379:-1:exon
so has part: feature:1844515-1846011:-1:exon

XP_010397926.1
type: Protein
SIO_000068: ncbiprotein

position:1844515:-1
position: 1844515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848379:-1
position: 1848379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847747-1848379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1844515-1846011:-1:exon

LOC104689638
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1856976..1871317)
location: region:1856976-1871317:-1
so has part: feature:1856976-1871317:-1:exon
subclass of: SO_0000010

104689638
type: Gene
SIO_000068: ncbigene

position:1856976:-1
position: 1856976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871317:-1
position: 1871317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1856976-1871317:-1:exon

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039559764.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1856976..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1860408..1860430,1868430..1868663,1869214..1869309,1870577..1871317))
location: region:1856976-1871317:-1
so has part: feature:1870577-1871317:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1860408-1860430:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1856976-1857614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871317:-1:exon

position:1870577:-1
position: 1870577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

position:1869214:-1
position: 1869214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869309:-1
position: 1869309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

position:1868430:-1
position: 1868430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868663:-1
position: 1868663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1860408-1860430:-1:exon

position:1860408:-1
position: 1860408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860430:-1
position: 1860430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

position:1859125:-1
position: 1859125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859261:-1
position: 1859261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

position:1858693:-1
position: 1858693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858723:-1
position: 1858723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

position:1858444:-1
position: 1858444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858469:-1
position: 1858469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1856976-1857614:-1:exon

position:1857614:-1
position: 1857614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039559762.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1856976..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871317))
location: region:1856976-1871317:-1
so has part: feature:1870577-1871317:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1856976-1857614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

position:1868268:-1
position: 1868268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868290:-1
position: 1868290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856976-1857614:-1:exon

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039559766.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1856976..1858601,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871315))
location: region:1856976-1871315:-1
so has part: feature:1870577-1871315:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1856976-1858601:-1:exon

position:1871315:-1
position: 1871315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1856976-1858601:-1:exon

position:1858601:-1
position: 1858601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039559765.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1856984..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1860408..1860430,1860569..1860802,1861353..1861448,1862716..1865339))
location: region:1856984-1865339:-1
so has part: feature:1862716-1865339:-1:exon
so has part: feature:1861353-1861448:-1:exon
so has part: feature:1860569-1860802:-1:exon
so has part: feature:1860408-1860430:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1856984-1857614:-1:exon

position:1856984:-1
position: 1856984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1865339:-1
position: 1865339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1862716-1865339:-1:exon

position:1862716:-1
position: 1862716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1861353-1861448:-1:exon

position:1861353:-1
position: 1861353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861448:-1
position: 1861448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1860569-1860802:-1:exon

position:1860569:-1
position: 1860569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860802:-1
position: 1860802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1860408-1860430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856984-1857614:-1:exon

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039559768.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1857529..1857614,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871313))
location: region:1857529-1871313:-1
so has part: feature:1870577-1871313:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1857529-1857614:-1:exon

position:1857529:-1
position: 1857529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871313:-1
position: 1871313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1857529-1857614:-1:exon

LOC104689638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Midline-1-like isoform X3
translation: MAKAWEGCGGAGSLEAELTCPICLGLYRDPVSLNCGHSFCRQCIKNMLGAQQHSQGPYTCPMCRIHLGPTVELQNNFQLGNIVEAFQASASKRQEDEGSEKGKTRVVPCEYCLDGFQEAVKTCVVCNVSLCQAHLSKHNAKASQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLPGTMTELQDSKSDLDTALEELQKCENQIKTNTKAVTSQLEAQLKDMRTQLVQKEKKILRCIKTIEENQLADIAKARKKMEQKRDQAEQNLQALQKIKEQPDIFLFLKELKLVTDRIASLDLDTERVDVEEVQLDQSMITQCQTLREKLMLQLDSLLQDVCVKLANQMELRSRTSATNTRLPEKDPLELLRQTIRKQQHLLNQKCKK
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1857532..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1860408..1860430,1868430..1868663,1869214..1869309,1870577..1871194))
location: region:1857532-1871194:-1
so has part: feature:1870577-1871194:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1860408-1860430:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1857532-1857614:-1:exon

XP_039415698.1
type: Protein
SIO_000068: ncbiprotein

position:1857532:-1
position: 1857532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871194:-1
position: 1871194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1860408-1860430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857532-1857614:-1:exon

LOC104689638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Midline-1-like isoform X2
translation: MAKAWEGCGGAGSLEAELTCPICLGLYRDPVSLNCGHSFCRQCIKNMLGAQQHSQGPYTCPMCRIHLGPTVELQNNFQLGNIVEAFQASASKRQEDEGSEKGKTRVVPCEYCLDGFQEAVKTCVVCNVSLCQAHLSKHNAKASQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLPGTMTELQDSKSDLDTALEELQKCENQIKTNTKAVTSQLEAQLKDMRTQLVQKEKKILRCIKTIEENQLADIAKARKKMEQKRDQAEQNLQALQKIKEQPDIFLFLKELKLVTDRIASLDLDTERVDVEEVQLDQSMITQCQTLREKLMLQLDSLLQDVCVKLANQMELRSRTSATNTRLPEKDPLELLRQTIRKQQHLLNQKCKK
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1857532..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871194))
location: region:1857532-1871194:-1
so has part: feature:1870577-1871194:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1857532-1857614:-1:exon

XP_039415696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857532-1857614:-1:exon

LOC104689638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase TRIM8 isoform X4
translation: MAKAWEGCGGADSLEAELTCPICLGFYRDPVSLNCGHNFCRQCIKNRLGNEWYYSNCYCPKCRAHLPYPLNLQSNFQLGNIVEAFLATISKRQEDEGSDEWKAGAVPCEYCLDRPKPAVKTCVVCEASLCQAHLSKHNAKGFQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLSDPMTELQDSKRDLDTALEELQESKNQVKTNTKAVTSQLEELFKDIKTELVQKEKKILSDIKSNKDNQLADIAKARKKMEQKRHQAEWNLQALQKIKEQPDTFLFFKELKLVTDRIASLDLDTERVDVEEVQLDQSMITQCQTLREKLMLQLDSLLQDVCVKLANQMELRSRTSATNTRLPEKDPLELLRQTIRKQQHLLNQKCKK
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1857532..1857614,1858444..1858469,1858693..1858723,1859125..1859261,1860408..1860430,1860569..1860802,1861353..1861448,1862716..1863330))
location: region:1857532-1863330:-1
so has part: feature:1862716-1863330:-1:exon
so has part: feature:1861353-1861448:-1:exon
so has part: feature:1860569-1860802:-1:exon
so has part: feature:1860408-1860430:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858469:-1:exon
so has part: feature:1857532-1857614:-1:exon

XP_039415699.1
type: Protein
SIO_000068: ncbiprotein

position:1863330:-1
position: 1863330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1862716-1863330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1861353-1861448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1860569-1860802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1860408-1860430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857532-1857614:-1:exon

LOC104689638
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005603068.1
SIO_010081: LOC104689638
so part of: LOC104689638
location: complement(join(1857542..1857614,1858444..1858601,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871315))
location: region:1857542-1871315:-1
so has part: feature:1870577-1871315:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858444-1858601:-1:exon
so has part: feature:1857542-1857614:-1:exon

position:1857542:-1
position: 1857542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858444-1858601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857542-1857614:-1:exon

LOC104689638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Midline-1-like isoform X7
translation: MAKAWEGCGGAGSLEAELTCPICLGLYRDPVSLNCGHSFCRQCIKNMLGAQQHSQGPYTCPMCRIHLGPTVELQNNFQLGNIVEAFQASASKRQEDEGSEKGKTRVVPCEYCLDGFQEAVKTCVVCNVSLCQAHLSKHNAKASQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLPGTMTELQDSKSDLDTALEELQKCENQIKTNTKAVTSQLEAQLKDMRTQLVQKEKKILRCIKTIEENQLADIAKARKKMEQKRDQAEQNLQALQKIKEQPDIFLFLKELKLVTDRIASLDLDTERVDVEEVQLDQSMITQCQTLREKLMLQLDSLLQDVCVKLANQMELRST
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1857608..1857614,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871194))
location: region:1857608-1871194:-1
so has part: feature:1870577-1871194:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1857608-1857614:-1:exon

XP_039415702.1
type: Protein
SIO_000068: ncbiprotein

position:1857608:-1
position: 1857608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1857608-1857614:-1:exon

LOC104689638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104689638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Midline-1-like isoform X5
translation: MAKAWEGCGGAGSLEAELTCPICLGLYRDPVSLNCGHSFCRQCIKNMLGAQQHSQGPYTCPMCRIHLGPTVELQNNFQLGNIVEAFQASASKRQEDEGSEKGKTRVVPCEYCLDGFQEAVKTCVVCNVSLCQAHLSKHNAKASQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLPGTMTELQDSKSDLDTALEELQKCENQIKTNTKAVTSQLEAQLKDMRTQLVQKEKKILRCIKTIEENQLADIAKARKKMEQKRDQAEQNLQALQKIKEQPDIFLFLKELKLVTDRIASLDLDTERVDVEEVQLDQSMITQCQTLREKLMLQLDSLLQDVCVKLANQMELRRFKET
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1858586..1858601,1858693..1858723,1859125..1859261,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871194))
location: region:1858586-1871194:-1
so has part: feature:1870577-1871194:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1859125-1859261:-1:exon
so has part: feature:1858693-1858723:-1:exon
so has part: feature:1858586-1858601:-1:exon

XP_039415700.1
type: Protein
SIO_000068: ncbiprotein

position:1858586:-1
position: 1858586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859125-1859261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858693-1858723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858586-1858601:-1:exon

LOC104689638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104689638
product: E3 ubiquitin-protein ligase Midline-1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_039559767.1
SIO_010081: LOC104689638
subclass of: SO_0000673
so part of: LOC104689638
location: complement(join(1864781..1865417,1866551..1866581,1866985..1867121,1868268..1868290,1868430..1868663,1869214..1869309,1870577..1871311))
location: region:1864781-1871311:-1
so has part: feature:1870577-1871311:-1:exon
so has part: feature:1869214-1869309:-1:exon
so has part: feature:1868430-1868663:-1:exon
so has part: feature:1868268-1868290:-1:exon
so has part: feature:1866985-1867121:-1:exon
so has part: feature:1866551-1866581:-1:exon
so has part: feature:1864781-1865417:-1:exon

position:1864781:-1
position: 1864781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871311:-1
position: 1871311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870577-1871311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869214-1869309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868430-1868663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1868268-1868290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1866985-1867121:-1:exon

position:1866985:-1
position: 1866985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867121:-1
position: 1867121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1866551-1866581:-1:exon