Corvus cornix cornix isolate S_Up_H32 chromosome 11, ASM73873v5, whole genome shotgun sequence.
type: Entry
definition: Corvus cornix cornix isolate S_Up_H32 chromosome 11, ASM73873v5, whole genome shotgun sequence.
sequence version: NC_046341.1
sequence date: 2021-02-16
sequence: sequence
division: CON
label: NC_046341.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA258180
dblink: SAMN02143031
keyword: WGS
keyword: RefSeq
source: Corvus cornix cornix
organism: Corvus cornix cornix
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
references: 28360231
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022194.2.\nAssembly name: ASM73873v5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2021/02/04. The original whole-genome shotgun project has the\naccession JPSR00000000.4.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: FALCON-Unzip v. 0.4.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 150.0x\nSequencing Technology :: PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus cornix cornix Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20924582
topology: linear
so has quality: SO_0000987
location: 1..20924582
location: region:1-20924582:1
RO_0002162: 932674

NC_046341
type: RefSeq
SIO_000068: refseq

PRJNA258180
type: BioProject
SIO_000068: bioproject

SAMN02143031
type: BioSample
SIO_000068: biosample

1
title: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
author: Weissensteiner, M.H.
author: Pang, A.W.C.
author: Bunikis, I.
author: Hoijer, I.
author: Vinnere-Petterson, O.
author: Suh, A.
author: Wolf, J.B.W.
journal: Genome Res.
volume: 27
issue: 5
pages: 697-708
year: 2017
pubmed: 28360231

28360231
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20924582:1
position: 20924582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20924582:1:source
so part of: sequence
organism: Corvus cornix cornix
mol type: genomic DNA
isolate: S_Up_H32
sub species: cornix
chromosome: 11
sex: male
tissue type: blood
country: Sweden: Uppsala
collection date: 2010

932674
type: Taxonomy
SIO_000068: taxonomy

LOC104691868
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6833..21585)
location: region:6833-21585:-1
so has part: feature:6833-21585:-1:exon
subclass of: SO_0000010

104691868
type: Gene
SIO_000068: ncbigene

position:6833:-1
position: 6833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21585:-1
position: 21585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6833-21585:-1:exon

LOC104691868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691868
product: carbohydrate sulfotransferase 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039558052.1
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(join(6833..7027,9090..11404,19811..20632))
location: region:6833-20632:-1
so has part: feature:19811-20632:-1:exon
so has part: feature:9090-11404:-1:exon
so has part: feature:6833-7027:-1:exon

position:20632:-1
position: 20632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19811-20632:-1:exon

position:19811:-1
position: 19811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9090-11404:-1:exon

position:9090:-1
position: 9090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11404:-1
position: 11404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6833-7027:-1:exon

position:7027:-1
position: 7027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691868
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: LOC104691868
product: carbohydrate sulfotransferase 5-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XR_005602849.1
SIO_010081: LOC104691868
so part of: LOC104691868
location: complement(join(6833..7027,7580..8786))
location: region:6833-8786:-1
so has part: feature:7580-8786:-1:exon
so has part: feature:6833-7027:-1:exon

position:8786:-1
position: 8786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7580-8786:-1:exon

position:7580:-1
position: 7580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6833-7027:-1:exon

LOC104691868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691868
product: carbohydrate sulfotransferase 5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039558055.1
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(join(6906..7027,9090..11404,21486..21585))
location: region:6906-21585:-1
so has part: feature:21486-21585:-1:exon
so has part: feature:9090-11404:-1:exon
so has part: feature:6906-7027:-1:exon

position:6906:-1
position: 6906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21486-21585:-1:exon

position:21486:-1
position: 21486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9090-11404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6906-7027:-1:exon

LOC104691868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691868
product: carbohydrate sulfotransferase 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_039558053.1
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(join(6906..7027,9090..11404,17963..18142))
location: region:6906-18142:-1
so has part: feature:17963-18142:-1:exon
so has part: feature:9090-11404:-1:exon
so has part: feature:6906-7027:-1:exon

position:18142:-1
position: 18142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17963-18142:-1:exon

position:17963:-1
position: 17963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9090-11404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6906-7027:-1:exon

LOC104691868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X1
translation: MYICFSRCPSSVRMARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDIMSEMACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQIYETATLKPPNFLKDRYLMVRFEDLVRDPFSEISEMYKFADLSLTPRLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(join(10195..11404,19811..19821))
location: region:10195-19821:-1
so has part: feature:19811-19821:-1:exon
so has part: feature:10195-11404:-1:exon

XP_039413986.1
type: Protein
SIO_000068: ncbiprotein

position:10195:-1
position: 10195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19821:-1
position: 19821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19811-19821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10195-11404:-1:exon

LOC104691868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDIMSEMACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQIYETATLKPPNFLKDRYLMVRFEDLVRDPFSEISEMYKFADLSLTPRLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(10195..11376)
location: region:10195-11376:-1
so has part: feature:10195-11376:-1:exon

XP_039413987.1
type: Protein
SIO_000068: ncbiprotein

position:11376:-1
position: 11376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10195-11376:-1:exon

LOC104691868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDIMSEMACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQIYETATLKPPNFLKDRYLMVRFEDLVRDPFSEISEMYKFADLSLTPRLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC104691868
subclass of: SO_0000673
so part of: LOC104691868
location: complement(10195..11376)
location: region:10195-11376:-1
so has part: feature:10195-11376:-1:exon

XP_039413989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10195-11376:-1:exon

LOC120410579
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18161..22895
location: region:18161-22895:1
so has part: feature:18161-22895:1:exon
subclass of: SO_0000011

120410579
type: Gene
SIO_000068: ncbigene

position:18161:1
position: 18161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22895:1
position: 22895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18161-22895:1:exon

LOC120410579
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410579
product: uncharacterized LOC120410579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005602850.1
SIO_010081: LOC120410579
subclass of: SO_0000673
so part of: LOC120410579
location: join(18161..18507,20270..20372,21584..21718,22808..22895)
location: region:18161-22895:1
so has part: feature:18161-18507:1:exon
so has part: feature:20270-20372:1:exon
so has part: feature:21584-21718:1:exon
so has part: feature:22808-22895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18161-18507:1:exon

position:18507:1
position: 18507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20270-20372:1:exon

position:20270:1
position: 20270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20372:1
position: 20372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21584-21718:1:exon

position:21584:1
position: 21584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21718:1
position: 21718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22808-22895:1:exon

position:22808:1
position: 22808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20603..25853)
location: region:20603-25853:-1
so has part: feature:20603-25853:-1:exon
subclass of: SO_0000010

104691967
type: Gene
SIO_000068: ncbigene

position:20603:-1
position: 20603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25853:-1
position: 25853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20603-25853:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMEM231
product: transmembrane protein 231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_039558058.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(20603..21316,22144..22249,22380..22461,22757..22900,25409..25578,25655..25853))
location: region:20603-25853:-1
so has part: feature:25655-25853:-1:exon
so has part: feature:25409-25578:-1:exon
so has part: feature:22757-22900:-1:exon
so has part: feature:22380-22461:-1:exon
so has part: feature:22144-22249:-1:exon
so has part: feature:20603-21316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25655-25853:-1:exon

position:25655:-1
position: 25655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25409-25578:-1:exon

position:25409:-1
position: 25409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25578:-1
position: 25578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22757-22900:-1:exon

position:22757:-1
position: 22757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22900:-1
position: 22900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22380-22461:-1:exon

position:22380:-1
position: 22380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22461:-1
position: 22461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22144-22249:-1:exon

position:22144:-1
position: 22144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22249:-1
position: 22249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20603-21316:-1:exon

position:21316:-1
position: 21316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMEM231
product: transmembrane protein 231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558057.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(20603..21316,22144..22249,22380..22461,22757..22900,24243..24371,25409..25578,25655..25853))
location: region:20603-25853:-1
so has part: feature:25655-25853:-1:exon
so has part: feature:25409-25578:-1:exon
so has part: feature:24243-24371:-1:exon
so has part: feature:22757-22900:-1:exon
so has part: feature:22380-22461:-1:exon
so has part: feature:22144-22249:-1:exon
so has part: feature:20603-21316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25655-25853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25409-25578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24243-24371:-1:exon

position:24243:-1
position: 24243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24371:-1
position: 24371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22757-22900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22380-22461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22144-22249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20603-21316:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MAGVDLFSHPALYTRYRAGFCSAAALALLLITALTYVPPLLVAYRSHGFWLKQSAYLEQPTVRFRYEVLFVATIGSGPGSFLAWSTFPAFNRLQEDRLRVPLLSRMSTFVMQSMAFLQFFSPVPGSQLYVNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLVNIIAAYWDRNVTTVFSDPNPVWMTGRATDTPFIINATVHYPVEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGRIKMFLFQNQVLTTIPVSPVLPVSPVVSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(21127..21316,22144..22249,22380..22461,22757..22900,25409..25578,25655..25796))
location: region:21127-25796:-1
so has part: feature:25655-25796:-1:exon
so has part: feature:25409-25578:-1:exon
so has part: feature:22757-22900:-1:exon
so has part: feature:22380-22461:-1:exon
so has part: feature:22144-22249:-1:exon
so has part: feature:21127-21316:-1:exon

XP_039413992.1
type: Protein
SIO_000068: ncbiprotein

position:21127:-1
position: 21127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25796:-1
position: 25796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25655-25796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25409-25578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22757-22900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22380-22461:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22144-22249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21127-21316:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X1
translation: MAGVDLFSHPALYTRYRAGFCSAAALALLLITALTYVPPLLVAYRSHGFWLKQSAYLEQPTVRFRYEVLFVATIGSGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILLFSYQLYRMSTFVMQSMAFLQFFSPVPGSQLYVNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLVNIIAAYWDRNVTTVFSDPNPVWMTGRATDTPFIINATVHYPVEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGRIKMFLFQNQVLTTIPVSPVLPVSPVVSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(21127..21316,22144..22249,22380..22461,22757..22900,24243..24371,25409..25578,25655..25796))
location: region:21127-25796:-1
so has part: feature:25655-25796:-1:exon
so has part: feature:25409-25578:-1:exon
so has part: feature:24243-24371:-1:exon
so has part: feature:22757-22900:-1:exon
so has part: feature:22380-22461:-1:exon
so has part: feature:22144-22249:-1:exon
so has part: feature:21127-21316:-1:exon

XP_039413991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25655-25796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25409-25578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24243-24371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22757-22900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22380-22461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22144-22249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21127-21316:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25964..30973
location: region:25964-30973:1
so has part: feature:25964-30973:1:exon
subclass of: SO_0000010

104691966
type: Gene
SIO_000068: ncbigene

position:25964:1
position: 25964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30973:1
position: 30973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25964-30973:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 16 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_039558059.1
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(25964..26352,26662..26717,28631..28803,30389..30973)
location: region:25964-30973:1
so has part: feature:25964-26352:1:exon
so has part: feature:26662-26717:1:exon
so has part: feature:28631-28803:1:exon
so has part: feature:30389-30973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25964-26352:1:exon

position:26352:1
position: 26352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26662-26717:1:exon

position:26662:1
position: 26662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26717:1
position: 26717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28631-28803:1:exon

position:28631:1
position: 28631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28803:1
position: 28803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30389-30973:1:exon

position:30389:1
position: 30389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(26319..26352,26662..26717,28631..28803,30389..30479)
location: region:26319-30479:1
so has part: feature:26319-26352:1:exon
so has part: feature:26662-26717:1:exon
so has part: feature:28631-28803:1:exon
so has part: feature:30389-30479:1:exon

XP_039413993.1
type: Protein
SIO_000068: ncbiprotein

position:26319:1
position: 26319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30479:1
position: 30479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26319-26352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26662-26717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28631-28803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30389-30479:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31919..61294)
location: region:31919-61294:-1
so has part: feature:31919-61294:-1:exon
subclass of: SO_0000010

104691867
type: Gene
SIO_000068: ncbigene

position:31919:-1
position: 31919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61294:-1
position: 61294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31919-61294:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_010403563.3
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(31919..35769,43731..43817,48482..48581,50836..50981,54873..55491,57035..57162,57937..57991,59705..59773,60539..60730,61033..61294))
location: region:31919-61294:-1
so has part: feature:61033-61294:-1:exon
so has part: feature:60539-60730:-1:exon
so has part: feature:59705-59773:-1:exon
so has part: feature:57937-57991:-1:exon
so has part: feature:57035-57162:-1:exon
so has part: feature:54873-55491:-1:exon
so has part: feature:50836-50981:-1:exon
so has part: feature:48482-48581:-1:exon
so has part: feature:43731-43817:-1:exon
so has part: feature:31919-35769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61033-61294:-1:exon

position:61033:-1
position: 61033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60539-60730:-1:exon

position:60539:-1
position: 60539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60730:-1
position: 60730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59705-59773:-1:exon

position:59705:-1
position: 59705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59773:-1
position: 59773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57937-57991:-1:exon

position:57937:-1
position: 57937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57991:-1
position: 57991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57035-57162:-1:exon

position:57035:-1
position: 57035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57162:-1
position: 57162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54873-55491:-1:exon

position:54873:-1
position: 54873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55491:-1
position: 55491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50836-50981:-1:exon

position:50836:-1
position: 50836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50981:-1
position: 50981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48482-48581:-1:exon

position:48482:-1
position: 48482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48581:-1
position: 48581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43731-43817:-1:exon

position:43731:-1
position: 43731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43817:-1
position: 43817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31919-35769:-1:exon

position:35769:-1
position: 35769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_010403564.3
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(35499..35769,43731..43817,48482..48581,50836..50981,54873..55491,59705..59773,60539..60730,61033..61294))
location: region:35499-61294:-1
so has part: feature:61033-61294:-1:exon
so has part: feature:60539-60730:-1:exon
so has part: feature:59705-59773:-1:exon
so has part: feature:54873-55491:-1:exon
so has part: feature:50836-50981:-1:exon
so has part: feature:48482-48581:-1:exon
so has part: feature:43731-43817:-1:exon
so has part: feature:35499-35769:-1:exon

position:35499:-1
position: 35499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61033-61294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60539-60730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59705-59773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54873-55491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50836-50981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48482-48581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43731-43817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35499-35769:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSLAAVVKVESAAQIEGLVSPGNLQVTKEVVAMGTGTKCIGQNKMRKTGGDASIFPISEPENQLSKPVTGGHAGGQSAECRSNHNHLCPEDKRKSGKMASNHILKRMKTYDGGCFSIITEDLAVQHESVKRQGNTSQKSCERSADMQTANKETGLVRPKLVDVHRTGAKCIPGELGDARTPGLGYHSVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHISSLPGGFLTQEVKLLQSDLQFEHSRQAIQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHQFQKLVTSISREDLPDTLRMKTLKTYWDYKEAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(35637..35769,43731..43817,48482..48581,50836..50981,54873..55491,59705..59773,60539..60707))
location: region:35637-60707:-1
so has part: feature:60539-60707:-1:exon
so has part: feature:59705-59773:-1:exon
so has part: feature:54873-55491:-1:exon
so has part: feature:50836-50981:-1:exon
so has part: feature:48482-48581:-1:exon
so has part: feature:43731-43817:-1:exon
so has part: feature:35637-35769:-1:exon

XP_010401866.1
type: Protein
SIO_000068: ncbiprotein

position:35637:-1
position: 35637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60707:-1
position: 60707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60539-60707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59705-59773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54873-55491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50836-50981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48482-48581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43731-43817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35637-35769:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSLAAVVKVESAAQIEGLVSPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNVVFIFFSSHTPCGDASIFPISEPENQLSKPVTGGHAGGQSAECRSNHNHLCPEDKRKSGKMASNHILKRMKTYDGGCFSIITEDLAVQHESVKRQGNTSQKSCERSADMQTANKETGLVRPKLVDVHRTGAKCIPGELGDARTPGLGYHSVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHISSLPGGFLTQEVKLLQSDLQFEHSRQAIQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHQFQKLVTSISREDLPDTLRMKTLKTYWDYKEAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(35637..35769,43731..43817,48482..48581,50836..50981,54873..55491,57035..57162,57937..57991,59705..59773,60539..60707))
location: region:35637-60707:-1
so has part: feature:60539-60707:-1:exon
so has part: feature:59705-59773:-1:exon
so has part: feature:57937-57991:-1:exon
so has part: feature:57035-57162:-1:exon
so has part: feature:54873-55491:-1:exon
so has part: feature:50836-50981:-1:exon
so has part: feature:48482-48581:-1:exon
so has part: feature:43731-43817:-1:exon
so has part: feature:35637-35769:-1:exon

XP_010401865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60539-60707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59705-59773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57937-57991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57035-57162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54873-55491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50836-50981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48482-48581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43731-43817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35637-35769:-1:exon

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61383..70247)
location: region:61383-70247:-1
so has part: feature:61383-70247:-1:exon
subclass of: SO_0000010

104691965
type: Gene
SIO_000068: ncbigene

position:61383:-1
position: 61383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70247:-1
position: 70247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61383-70247:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558049.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61383..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,70157..70247))
location: region:61383-70247:-1
so has part: feature:70157-70247:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61383-61565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70157-70247:-1:exon

position:70157:-1
position: 70157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

position:69331:-1
position: 69331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69475:-1
position: 69475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

position:68957:-1
position: 68957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69122:-1
position: 69122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

position:68485:-1
position: 68485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68578:-1
position: 68578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

position:68018:-1
position: 68018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68204:-1
position: 68204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

position:67638:-1
position: 67638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67763:-1
position: 67763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

position:66771:-1
position: 66771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66890:-1
position: 66890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

position:66408:-1
position: 66408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66570:-1
position: 66570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

position:66135:-1
position: 66135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66308:-1
position: 66308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

position:65317:-1
position: 65317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65402:-1
position: 65402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:64445-64530:-1:exon

position:64445:-1
position: 64445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64530:-1
position: 64530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:64008-64134:-1:exon

position:64008:-1
position: 64008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64134:-1
position: 64134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:61867-62010:-1:exon

position:61867:-1
position: 61867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62010:-1
position: 62010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:61383-61565:-1:exon

position:61565:-1
position: 61565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_039558051.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61383..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,70151..70238))
location: region:61383-70238:-1
so has part: feature:70151-70238:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61383-61565:-1:exon

position:70238:-1
position: 70238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70151-70238:-1:exon

position:70151:-1
position: 70151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64445-64530:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64008-64134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:61867-62010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:61383-61565:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558047.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61383..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,69966..70131))
location: region:61383-70131:-1
so has part: feature:69966-70131:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61383-61565:-1:exon

position:70131:-1
position: 70131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69966-70131:-1:exon

position:69966:-1
position: 69966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64445-64530:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64008-64134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:61867-62010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:61383-61565:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MEMAAAARECEAAETESHLSKNELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSDDNVGADEESLDPNQYYKIRSHAVQQLKGSNEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNVTVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEQEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQTYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPLPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEGQPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61488..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,70157..70221))
location: region:61488-70221:-1
so has part: feature:70157-70221:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61488-61565:-1:exon

XP_039413983.1
type: Protein
SIO_000068: ncbiprotein

position:61488:-1
position: 61488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70221:-1
position: 70221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70157-70221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64445-64530:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64008-64134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:61867-62010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:61488-61565:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLSSGAARLRSWVWRAAPALRCQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSDDNVGADEESLDPNQYYKIRSHAVQQLKGSNEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNVTVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEQEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQTYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPLPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEGQPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61488..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,69966..70057))
location: region:61488-70057:-1
so has part: feature:69966-70057:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61488-61565:-1:exon

XP_039413981.1
type: Protein
SIO_000068: ncbiprotein

position:70057:-1
position: 70057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69966-70057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64445-64530:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64008-64134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:61867-62010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:61488-61565:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X4
translation: MANSSLYKSEQEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQTYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPLPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEGQPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(61488..61565,61867..62010,64008..64134,64445..64530,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68498))
location: region:61488-68498:-1
so has part: feature:68485-68498:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64445-64530:-1:exon
so has part: feature:64008-64134:-1:exon
so has part: feature:61867-62010:-1:exon
so has part: feature:61488-61565:-1:exon

XP_039413985.1
type: Protein
SIO_000068: ncbiprotein

position:68498:-1
position: 68498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68485-68498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64445-64530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64008-64134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61867-62010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61488-61565:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558050.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(64577..64660,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,69966..70133))
location: region:64577-70133:-1
so has part: feature:69966-70133:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64577-64660:-1:exon

position:64577:-1
position: 64577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70133:-1
position: 70133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69966-70133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64577-64660:-1:exon

position:64660:-1
position: 64660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X3
translation: MLSSGAARLRSWVWRAAPALRCQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSDDNVGADEESLDPNQYYKIRSHAVQQLKGSNEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNVTVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEQEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQTYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPLPRTTARLLDKLVGEFLEVTCINPTLFCFCFPS
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(64592..64660,65317..65402,66135..66308,66408..66570,66771..66890,67638..67763,68018..68204,68485..68578,68957..69122,69331..69475,69966..70057))
location: region:64592-70057:-1
so has part: feature:69966-70057:-1:exon
so has part: feature:69331-69475:-1:exon
so has part: feature:68957-69122:-1:exon
so has part: feature:68485-68578:-1:exon
so has part: feature:68018-68204:-1:exon
so has part: feature:67638-67763:-1:exon
so has part: feature:66771-66890:-1:exon
so has part: feature:66408-66570:-1:exon
so has part: feature:66135-66308:-1:exon
so has part: feature:65317-65402:-1:exon
so has part: feature:64592-64660:-1:exon

XP_039413984.1
type: Protein
SIO_000068: ncbiprotein

position:64592:-1
position: 64592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69966-70057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69331-69475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68957-69122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68485-68578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68018-68204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67638-67763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66771-66890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66408-66570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66135-66308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65317-65402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64592-64660:-1:exon

LOC104691964
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70268..74327
location: region:70268-74327:1
so has part: feature:70268-74327:1:exon
subclass of: SO_0000010

104691964
type: Gene
SIO_000068: ncbigene

position:70268:1
position: 70268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74327:1
position: 74327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70268-74327:1:exon

LOC104691964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691964
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558056.1
SIO_010081: LOC104691964
subclass of: SO_0000673
so part of: LOC104691964
location: join(70268..70766,70880..70956,71561..74327)
location: region:70268-74327:1
so has part: feature:70268-70766:1:exon
so has part: feature:70880-70956:1:exon
so has part: feature:71561-74327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70268-70766:1:exon

position:70766:1
position: 70766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70880-70956:1:exon

position:70880:1
position: 70880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70956:1
position: 70956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71561-74327:1:exon

position:71561:1
position: 71561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MVAGGAGAAMAGGQAGAARSRSLFLWDDGRPMRFYLRPGLAKLRVAPLVLAGGGRLCRVQEPGAVLLAQPGEAAPDGAVSTEYVTECVERNQRLPLEPFLLAARGRLAFTEAEDAALLRAVRGQGTVRESGRALWIELERSGLTRHSWQAMRDRYLRHLRPRLCEPPQTEDPTQIKGLFAAANREFESTESESDSSDVAELSTQDGVGRSPGETASDLKTGPEDPAFPGIKLQSQERPKRTCSSSNVVGQVVKTMEHFMEKFAVDLFTVTQAFLKNSGDVEATSYFLQTGQRLDGYPVWSREDDLELQKDDEHVRNKLIAKFGAENVAKRIVFRES
SIO_010081: LOC104691964
subclass of: SO_0000673
so part of: LOC104691964
location: join(70274..70766,70880..70956,71561..72001)
location: region:70274-72001:1
so has part: feature:70274-70766:1:exon
so has part: feature:70880-70956:1:exon
so has part: feature:71561-72001:1:exon

XP_039413990.1
type: Protein
SIO_000068: ncbiprotein

position:70274:1
position: 70274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72001:1
position: 72001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70274-70766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70880-70956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71561-72001:1:exon

LOC104691866
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75611..83685)
location: region:75611-83685:-1
so has part: feature:75611-83685:-1:exon
subclass of: SO_0000010

104691866
type: Gene
SIO_000068: ncbigene

position:75611:-1
position: 75611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83685:-1
position: 83685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75611-83685:-1:exon

LOC104691866
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691866
product: carbohydrate sulfotransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019288308.3
SIO_010081: LOC104691866
subclass of: SO_0000673
so part of: LOC104691866
location: complement(join(75611..77387,83608..83685))
location: region:75611-83685:-1
so has part: feature:83608-83685:-1:exon
so has part: feature:75611-77387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83608-83685:-1:exon

position:83608:-1
position: 83608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75611-77387:-1:exon

position:77387:-1
position: 77387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691866
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691866
product: carbohydrate sulfotransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019288306.3
SIO_010081: LOC104691866
subclass of: SO_0000673
so part of: LOC104691866
location: complement(join(75611..77387,81235..81444))
location: region:75611-81444:-1
so has part: feature:81235-81444:-1:exon
so has part: feature:75611-77387:-1:exon

position:81444:-1
position: 81444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81235-81444:-1:exon

position:81235:-1
position: 81235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75611-77387:-1:exon

LOC104691866
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4
translation: MVKSRRVQVLLILVVLSFLLIHFIPCSNNAHMKERPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVKMYQNNAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSTVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYNTMQVICKSHVEIYKAGSQAVPTFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELRKWVHNITHGKGHGAQAFDIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEEQKNMSLDLLFAQNSSEYQILKAEKLVSTPTL
SIO_010081: LOC104691866
subclass of: SO_0000673
so part of: LOC104691866
location: complement(76196..77374)
location: region:76196-77374:-1
so has part: feature:76196-77374:-1:exon

XP_019143853.1
type: Protein
SIO_000068: ncbiprotein

position:76196:-1
position: 76196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77374:-1
position: 77374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76196-77374:-1:exon

LOC104691866
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4
translation: MVKSRRVQVLLILVVLSFLLIHFIPCSNNAHMKERPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVKMYQNNAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSTVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYNTMQVICKSHVEIYKAGSQAVPTFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELRKWVHNITHGKGHGAQAFDIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEEQKNMSLDLLFAQNSSEYQILKAEKLVSTPTL
SIO_010081: LOC104691866
subclass of: SO_0000673
so part of: LOC104691866
location: complement(76196..77374)
location: region:76196-77374:-1
so has part: feature:76196-77374:-1:exon

XP_019143851.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76196-77374:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(86611..96462)
location: region:86611-96462:-1
so has part: feature:86611-96462:-1:exon
subclass of: SO_0000010

104691865
type: Gene
SIO_000068: ncbigene

position:86611:-1
position: 86611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96462:-1
position: 96462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86611-96462:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TAT
product: tyrosine aminotransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010403560.3
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(86611..87295,88033..88131,89694..89777,90207..90335,91366..91518,91889..91941,92467..92605,92785..92943,93324..93391,94221..94325,94506..94748,96354..96462))
location: region:86611-96462:-1
so has part: feature:96354-96462:-1:exon
so has part: feature:94506-94748:-1:exon
so has part: feature:94221-94325:-1:exon
so has part: feature:93324-93391:-1:exon
so has part: feature:92785-92943:-1:exon
so has part: feature:92467-92605:-1:exon
so has part: feature:91889-91941:-1:exon
so has part: feature:91366-91518:-1:exon
so has part: feature:90207-90335:-1:exon
so has part: feature:89694-89777:-1:exon
so has part: feature:88033-88131:-1:exon
so has part: feature:86611-87295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96354-96462:-1:exon

position:96354:-1
position: 96354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94506-94748:-1:exon

position:94506:-1
position: 94506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94748:-1
position: 94748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94221-94325:-1:exon

position:94221:-1
position: 94221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94325:-1
position: 94325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93324-93391:-1:exon

position:93324:-1
position: 93324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93391:-1
position: 93391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92785-92943:-1:exon

position:92785:-1
position: 92785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92943:-1
position: 92943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92467-92605:-1:exon

position:92467:-1
position: 92467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92605:-1
position: 92605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91889-91941:-1:exon

position:91889:-1
position: 91889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91941:-1
position: 91941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:91366-91518:-1:exon

position:91366:-1
position: 91366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91518:-1
position: 91518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:90207-90335:-1:exon

position:90207:-1
position: 90207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90335:-1
position: 90335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89694-89777:-1:exon

position:89694:-1
position: 89694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89777:-1
position: 89777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:88033-88131:-1:exon

position:88033:-1
position: 88033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88131:-1
position: 88131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:86611-87295:-1:exon

position:87295:-1
position: 87295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVNGHGDHAPMLDVHLKSTGNTISPGKAKGRKPRWAVRASEMSKKTFNPIRAIVDSMKVEPNPKKAMISLSLGDPTAFGNLPTNDEVTRAVKEVLDSGQYNGYAPSVGYQSCREAVAAYYNCPEAPLKAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKAWEIDLEHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQEILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHRTPPEFYHNTLSILKSNADLCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITMPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(87152..87295,88033..88131,89694..89777,90207..90335,91366..91518,91889..91941,92467..92605,92785..92943,93324..93391,94221..94325,94506..94740))
location: region:87152-94740:-1
so has part: feature:94506-94740:-1:exon
so has part: feature:94221-94325:-1:exon
so has part: feature:93324-93391:-1:exon
so has part: feature:92785-92943:-1:exon
so has part: feature:92467-92605:-1:exon
so has part: feature:91889-91941:-1:exon
so has part: feature:91366-91518:-1:exon
so has part: feature:90207-90335:-1:exon
so has part: feature:89694-89777:-1:exon
so has part: feature:88033-88131:-1:exon
so has part: feature:87152-87295:-1:exon

XP_010401862.1
type: Protein
SIO_000068: ncbiprotein

position:87152:-1
position: 87152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94740:-1
position: 94740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94506-94740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94221-94325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93324-93391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92785-92943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92467-92605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91889-91941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91366-91518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90207-90335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89694-89777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88033-88131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87152-87295:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100155..106450
location: region:100155-106450:1
so has part: feature:100155-106450:1:exon
subclass of: SO_0000010

120410581
type: Gene
SIO_000068: ncbigene

position:100155:1
position: 100155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106450:1
position: 106450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100155-106450:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MARVELD3
product: MARVEL domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039558095.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(100155..100242,100319..100427,103617..103974,104060..104157,104271..106450)
location: region:100155-106450:1
so has part: feature:100155-100242:1:exon
so has part: feature:100319-100427:1:exon
so has part: feature:103617-103974:1:exon
so has part: feature:104060-104157:1:exon
so has part: feature:104271-106450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100155-100242:1:exon

position:100242:1
position: 100242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100319-100427:1:exon

position:100319:1
position: 100319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100427:1
position: 100427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103617-103974:1:exon

position:103617:1
position: 103617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103974:1
position: 103974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104060-104157:1:exon

position:104060:1
position: 104060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104157:1
position: 104157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104271-106450:1:exon

position:104271:1
position: 104271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: MARVELD3
product: MARVEL domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039558093.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(100155..100242,100319..100427,103617..103958,104271..106450)
location: region:100155-106450:1
so has part: feature:100155-100242:1:exon
so has part: feature:100319-100427:1:exon
so has part: feature:103617-103958:1:exon
so has part: feature:104271-106450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100155-100242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100319-100427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103617-103958:1:exon

position:103958:1
position: 103958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104271-106450:1:exon

MARVELD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MARVELD3
product: MARVEL domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005602861.1
SIO_010081: MARVELD3
so part of: MARVELD3
location: join(100249..103122,103617..103711,104060..104250)
location: region:100249-104250:1
so has part: feature:100249-103122:1:exon
so has part: feature:103617-103711:1:exon
so has part: feature:104060-104250:1:exon

position:100249:1
position: 100249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104250:1
position: 104250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100249-103122:1:exon

position:103122:1
position: 103122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103617-103711:1:exon

position:103711:1
position: 103711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104060-104250:1:exon

MARVELD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MARVELD3
product: MARVEL domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005602860.1
SIO_010081: MARVELD3
so part of: MARVELD3
location: join(100256..102443,102843..103711,104060..104250)
location: region:100256-104250:1
so has part: feature:100256-102443:1:exon
so has part: feature:102843-103711:1:exon
so has part: feature:104060-104250:1:exon

position:100256:1
position: 100256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100256-102443:1:exon

position:102443:1
position: 102443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102843-103711:1:exon

position:102843:1
position: 102843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104060-104250:1:exon

MARVELD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: MARVELD3
product: MARVEL domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005602862.1
SIO_010081: MARVELD3
so part of: MARVELD3
location: join(100339..100427,102382..103711,104060..104250)
location: region:100339-104250:1
so has part: feature:100339-100427:1:exon
so has part: feature:102382-103711:1:exon
so has part: feature:104060-104250:1:exon

position:100339:1
position: 100339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100339-100427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102382-103711:1:exon

position:102382:1
position: 102382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104060-104250:1:exon

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3 isoform X2
translation: MLLVPEYSERHLVQTCVCLHPGKYYPGGKPRDVIATRGCGWKRRGADTHAQQLVNRAQVPEELSTSRRGRAWPGWSFHHSREALAGLRRADETEFTALALPRGGPARPPVPSAGGAGPRRAMAERDCPRAARGDAPGRAGGENSGRAVPGAEAEGPRGSRAVPGSLERRRCLYLRTGRACCQMMEVLLAALILVCSSVSGGSTGGYTGLPAMGGIYYYQYGGAYSGFSGAEGERAQQLDQRFYLLKLPIARAAMAVGGCLLVFPCVLILVGVLRLPWHFPAWLLIECSLYIVIAVGTGPALYYFFHSLLSVYNSSVCKEREQLYQSKGYQGFWCSLHGAEIAAGLLGCMAAMAYLLSAGLAVRDYRTVHEQKQKPLQL
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(100349..100427,103617..103974,104060..104157,104271..104872)
location: region:100349-104872:1
so has part: feature:100349-100427:1:exon
so has part: feature:103617-103974:1:exon
so has part: feature:104060-104157:1:exon
so has part: feature:104271-104872:1:exon

XP_039414029.1
type: Protein
SIO_000068: ncbiprotein

position:100349:1
position: 100349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104872:1
position: 104872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100349-100427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103617-103974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104060-104157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104271-104872:1:exon

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3 isoform X1
translation: MLLVPEYSERHLVQTCVCLHPGKYYPGGKPRDVIATRGCGWKRRGADTHAQQLVNRAQVPEELSTSRRGRAWPGWSFHHSREALAGLRRADETEFTALALPRGGPARPPVPSAGGAGPRRAMAERDCPRAARGDAPGRAGACCQMMEVLLAALILVCSSVSGGSTGGYTGLPAMGGIYYYQYGGAYSGFSGAEGERAQQLDQRFYLLKLPIARAAMAVGGCLLVFPCVLILVGVLRLPWHFPAWLLIECSLYIVIAVGTGPALYYFFHSLLSVYNSSVCKEREQLYQSKGYQGFWCSLHGAEIAAGLLGCMAAMAYLLSAGLAVRDYRTVHEQKQKPLQL
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(100349..100427,103617..103958,104271..104872)
location: region:100349-104872:1
so has part: feature:100349-100427:1:exon
so has part: feature:103617-103958:1:exon
so has part: feature:104271-104872:1:exon

XP_039414027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100349-100427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103617-103958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104271-104872:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106345..140774)
location: region:106345-140774:-1
so has part: feature:106345-140774:-1:exon
subclass of: SO_0000010

104691963
type: Gene
SIO_000068: ncbigene

position:106345:-1
position: 106345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140774:-1
position: 140774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106345-140774:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_039558075.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(106345..111821,113168..113399,113529..113717,114179..114289,114675..114805,116065..116227,116738..116938,117600..117755,119030..119125,119720..119780,120287..120489,121219..121449,122933..123079,127105..127259,128359..128484,128914..129104,133146..133279,140150..140394,140620..140774))
location: region:106345-140774:-1
so has part: feature:140620-140774:-1:exon
so has part: feature:140150-140394:-1:exon
so has part: feature:133146-133279:-1:exon
so has part: feature:128914-129104:-1:exon
so has part: feature:128359-128484:-1:exon
so has part: feature:127105-127259:-1:exon
so has part: feature:122933-123079:-1:exon
so has part: feature:121219-121449:-1:exon
so has part: feature:120287-120489:-1:exon
so has part: feature:119720-119780:-1:exon
so has part: feature:119030-119125:-1:exon
so has part: feature:117600-117755:-1:exon
so has part: feature:116738-116938:-1:exon
so has part: feature:116065-116227:-1:exon
so has part: feature:114675-114805:-1:exon
so has part: feature:114179-114289:-1:exon
so has part: feature:113529-113717:-1:exon
so has part: feature:113168-113399:-1:exon
so has part: feature:106345-111821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140620-140774:-1:exon

position:140620:-1
position: 140620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140150-140394:-1:exon

position:140150:-1
position: 140150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140394:-1
position: 140394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133146-133279:-1:exon

position:133146:-1
position: 133146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133279:-1
position: 133279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128914-129104:-1:exon

position:128914:-1
position: 128914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129104:-1
position: 129104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128359-128484:-1:exon

position:128359:-1
position: 128359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128484:-1
position: 128484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127105-127259:-1:exon

position:127105:-1
position: 127105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127259:-1
position: 127259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122933-123079:-1:exon

position:122933:-1
position: 122933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123079:-1
position: 123079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:121219-121449:-1:exon

position:121219:-1
position: 121219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121449:-1
position: 121449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:120287-120489:-1:exon

position:120287:-1
position: 120287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120489:-1
position: 120489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:119720-119780:-1:exon

position:119720:-1
position: 119720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119780:-1
position: 119780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:119030-119125:-1:exon

position:119030:-1
position: 119030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119125:-1
position: 119125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:117600-117755:-1:exon

position:117600:-1
position: 117600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117755:-1
position: 117755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:116738-116938:-1:exon

position:116738:-1
position: 116738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116938:-1
position: 116938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116065-116227:-1:exon

position:116065:-1
position: 116065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116227:-1
position: 116227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:114675-114805:-1:exon

position:114675:-1
position: 114675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114805:-1
position: 114805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:114179-114289:-1:exon

position:114179:-1
position: 114179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114289:-1
position: 114289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:113529-113717:-1:exon

position:113529:-1
position: 113529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113717:-1
position: 113717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:113168-113399:-1:exon

position:113168:-1
position: 113168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113399:-1
position: 113399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:106345-111821:-1:exon

position:111821:-1
position: 111821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2
translation: MGEAGPGPGPGPREAQEPEEDEAAAPGGARGGRAGPRGGIRVLKRNAKRTGSRSCQSRSRVGSRERTWLKGDVGRGCVYVYGRDSAAAAPSDLRLVLCTVDTQASEICDGEGRKNLFLQLHGDLVRRLEPTEKPLQIVYDYLAGLGFDDPLRMQEEAANSDLSCMIRFYGEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHISFETLAECQRWHRQASTIVSMRFSMVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFWLDGNFLTSLPEEMGNLQQLNCLGLSFNNFCELPAICEKLVNLDKLALAGNLLETLDLTVLNRMSHIKSVDLRLNNLKRAAADTLEGNKSVAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYANSNCLTAVNIYPVPGLLTYLELSHNQLQCVPDWACEAKKLEVLDVSYNLLLELPSRILRSLSLRKLMVGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLASNNLQTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGSLQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALTSTFWNHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRNEVADPASNFSLTVANVGTCQAVLCRSGKALPLSKVFSLEQCSEEARRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKALWEHLSHAEAVSAVRHLHDPRAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDNCTCEMHGLTLPGPGGFSSTTTKPATPSCSSGIASEFSSELSASEVSSEVGSTASDEHGAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLELERPAAEYSSSAPGPENDSGLVLIIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQVEPEDQFVVPPDLEEEVKEQMKQHQEDGADQELKEHAAPLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(110685..111821,113168..113399,113529..113717,114179..114289,114675..114805,116065..116227,116738..116938,117600..117755,119030..119125,119720..119780,120287..120489,121219..121449,122933..123079,127105..127259,128359..128484,128914..129104,133146..133279,140150..140394,140620..140751))
location: region:110685-140751:-1
so has part: feature:140620-140751:-1:exon
so has part: feature:140150-140394:-1:exon
so has part: feature:133146-133279:-1:exon
so has part: feature:128914-129104:-1:exon
so has part: feature:128359-128484:-1:exon
so has part: feature:127105-127259:-1:exon
so has part: feature:122933-123079:-1:exon
so has part: feature:121219-121449:-1:exon
so has part: feature:120287-120489:-1:exon
so has part: feature:119720-119780:-1:exon
so has part: feature:119030-119125:-1:exon
so has part: feature:117600-117755:-1:exon
so has part: feature:116738-116938:-1:exon
so has part: feature:116065-116227:-1:exon
so has part: feature:114675-114805:-1:exon
so has part: feature:114179-114289:-1:exon
so has part: feature:113529-113717:-1:exon
so has part: feature:113168-113399:-1:exon
so has part: feature:110685-111821:-1:exon

XP_039414009.1
type: Protein
SIO_000068: ncbiprotein

position:110685:-1
position: 110685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140751:-1
position: 140751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140620-140751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140150-140394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133146-133279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128914-129104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128359-128484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127105-127259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122933-123079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121219-121449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120287-120489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119720-119780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119030-119125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117600-117755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116738-116938:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:116065-116227:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:114675-114805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114179-114289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:113529-113717:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:113168-113399:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:110685-111821:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141729..180040)
location: region:141729-180040:-1
so has part: feature:141729-180040:-1:exon
subclass of: SO_0000010

104691864
type: Gene
SIO_000068: ncbigene

position:141729:-1
position: 141729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180040:-1
position: 180040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141729-180040:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_039558079.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(141729..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,161992..162068,162908..163004,164236..164377,166520..166644,170851..171054,179757..180040))
location: region:141729-180040:-1
so has part: feature:179757-180040:-1:exon
so has part: feature:170851-171054:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:141729-145598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179757-180040:-1:exon

position:179757:-1
position: 179757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170851-171054:-1:exon

position:170851:-1
position: 170851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171054:-1
position: 171054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166520-166644:-1:exon

position:166520:-1
position: 166520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166644:-1
position: 166644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164236-164377:-1:exon

position:164236:-1
position: 164236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164377:-1
position: 164377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162908-163004:-1:exon

position:162908:-1
position: 162908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163004:-1
position: 163004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161992-162068:-1:exon

position:161992:-1
position: 161992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162068:-1
position: 162068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159588-159683:-1:exon

position:159588:-1
position: 159588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159683:-1
position: 159683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:159044-159124:-1:exon

position:159044:-1
position: 159044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159124:-1
position: 159124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:158704-158802:-1:exon

position:158704:-1
position: 158704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158802:-1
position: 158802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158234-158289:-1:exon

position:158234:-1
position: 158234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158289:-1
position: 158289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:157324-157437:-1:exon

position:157324:-1
position: 157324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157437:-1
position: 157437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:154350-154490:-1:exon

position:154350:-1
position: 154350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154490:-1
position: 154490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:153998-154052:-1:exon

position:153998:-1
position: 153998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154052:-1
position: 154052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:152775-152897:-1:exon

position:152775:-1
position: 152775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152897:-1
position: 152897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152376-152465:-1:exon

position:152376:-1
position: 152376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152465:-1
position: 152465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:151749-151876:-1:exon

position:151749:-1
position: 151749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151876:-1
position: 151876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:151044-151148:-1:exon

position:151044:-1
position: 151044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151148:-1
position: 151148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:150410-150551:-1:exon

position:150410:-1
position: 150410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150551:-1
position: 150551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149721-149847:-1:exon

position:149721:-1
position: 149721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149847:-1
position: 149847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:149177-149272:-1:exon

position:149177:-1
position: 149177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149272:-1
position: 149272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:148770-148930:-1:exon

position:148770:-1
position: 148770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148930:-1
position: 148930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:147679-147777:-1:exon

position:147679:-1
position: 147679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147777:-1
position: 147777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:141729-145598:-1:exon

position:145598:-1
position: 145598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 45 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_039558077.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(141729..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,160865..160873,161992..162068,162908..163004,164236..164377,166520..166644,170851..171054,179757..180040))
location: region:141729-180040:-1
so has part: feature:179757-180040:-1:exon
so has part: feature:170851-171054:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:160865-160873:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:141729-145598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179757-180040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170851-171054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166520-166644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164236-164377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162908-163004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161992-162068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160865-160873:-1:exon

position:160865:-1
position: 160865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160873:-1
position: 160873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:159588-159683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159044-159124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158704-158802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158234-158289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157324-157437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:154350-154490:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153998-154052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152775-152897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152376-152465:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:151749-151876:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:151044-151148:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:150410-150551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:149721-149847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149177-149272:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:148770-148930:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:147679-147777:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:141729-145598:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010403557.4
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(144356..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,160865..160873,161992..162068,162908..163004,164236..164377,166520..166644,170851..171054,179315..179394))
location: region:144356-179394:-1
so has part: feature:179315-179394:-1:exon
so has part: feature:170851-171054:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:160865-160873:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:144356-145598:-1:exon

position:144356:-1
position: 144356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179394:-1
position: 179394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179315-179394:-1:exon

position:179315:-1
position: 179315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170851-171054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166520-166644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164236-164377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162908-163004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161992-162068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160865-160873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159588-159683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159044-159124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158704-158802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158234-158289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157324-157437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:154350-154490:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153998-154052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152775-152897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152376-152465:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:151749-151876:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:151044-151148:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:150410-150551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:149721-149847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149177-149272:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:148770-148930:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:147679-147777:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:144356-145598:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(145497..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,161992..162068,162908..163004,164236..164377,166520..166644,170851..171051))
location: region:145497-171051:-1
so has part: feature:170851-171051:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:145497-145598:-1:exon

XP_039414013.1
type: Protein
SIO_000068: ncbiprotein

position:145497:-1
position: 145497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171051:-1
position: 171051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170851-171051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166520-166644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164236-164377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162908-163004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161992-162068:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159588-159683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159044-159124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158704-158802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158234-158289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157324-157437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154350-154490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153998-154052:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152775-152897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152376-152465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:151749-151876:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:151044-151148:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:150410-150551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149721-149847:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149177-149272:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:148770-148930:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:147679-147777:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:145497-145598:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(145497..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,160865..160873,161992..162068,162908..163004,164236..164377,166520..166644,170851..171051))
location: region:145497-171051:-1
so has part: feature:170851-171051:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:160865-160873:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:145497-145598:-1:exon

XP_039414011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170851-171051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166520-166644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164236-164377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162908-163004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161992-162068:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160865-160873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159588-159683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159044-159124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158704-158802:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158234-158289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157324-157437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:154350-154490:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153998-154052:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152775-152897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152376-152465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:151749-151876:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:151044-151148:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:150410-150551:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149721-149847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:149177-149272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:148770-148930:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:147679-147777:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:145497-145598:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(145497..145598,147679..147777,148770..148930,149177..149272,149721..149847,150410..150551,151044..151148,151749..151876,152376..152465,152775..152897,153998..154052,154350..154490,157324..157437,158234..158289,158704..158802,159044..159124,159588..159683,160865..160873,161992..162068,162908..163004,164236..164377,166520..166644,170851..171051))
location: region:145497-171051:-1
so has part: feature:170851-171051:-1:exon
so has part: feature:166520-166644:-1:exon
so has part: feature:164236-164377:-1:exon
so has part: feature:162908-163004:-1:exon
so has part: feature:161992-162068:-1:exon
so has part: feature:160865-160873:-1:exon
so has part: feature:159588-159683:-1:exon
so has part: feature:159044-159124:-1:exon
so has part: feature:158704-158802:-1:exon
so has part: feature:158234-158289:-1:exon
so has part: feature:157324-157437:-1:exon
so has part: feature:154350-154490:-1:exon
so has part: feature:153998-154052:-1:exon
so has part: feature:152775-152897:-1:exon
so has part: feature:152376-152465:-1:exon
so has part: feature:151749-151876:-1:exon
so has part: feature:151044-151148:-1:exon
so has part: feature:150410-150551:-1:exon
so has part: feature:149721-149847:-1:exon
so has part: feature:149177-149272:-1:exon
so has part: feature:148770-148930:-1:exon
so has part: feature:147679-147777:-1:exon
so has part: feature:145497-145598:-1:exon

XP_010401859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170851-171051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166520-166644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164236-164377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162908-163004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161992-162068:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160865-160873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159588-159683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159044-159124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158704-158802:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158234-158289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157324-157437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:154350-154490:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153998-154052:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152775-152897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152376-152465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:151749-151876:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:151044-151148:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:150410-150551:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149721-149847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:149177-149272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:148770-148930:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:147679-147777:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:145497-145598:-1:exon

LOC120410637
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410637
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(155841..155927)
location: region:155841-155927:-1
so has part: feature:155841-155927:-1:exon
subclass of: SO_0000578

120410637
type: Gene
SIO_000068: ncbigene

position:155841:-1
position: 155841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155927:-1
position: 155927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155841-155927:-1:exon

LOC120410637
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: snoRNA
gene: LOC120410637
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005602933.1
SIO_010081: LOC120410637
subclass of: SO_0000673
so part of: LOC120410637
location: complement(155841..155927)
location: region:155841-155927:-1
so has part: feature:155841-155927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155841-155927:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180109..187720
location: region:180109-187720:1
so has part: feature:180109-187720:1:exon
subclass of: SO_0000010

104691961
type: Gene
SIO_000068: ncbigene

position:180109:1
position: 180109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187720:1
position: 187720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180109-187720:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ATXN1L
product: ataxin 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039558081.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(180109..180724,181100..187720)
location: region:180109-187720:1
so has part: feature:180109-180724:1:exon
so has part: feature:181100-187720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180109-180724:1:exon

position:180724:1
position: 180724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181100-187720:1:exon

position:181100:1
position: 181100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ATXN1L
product: ataxin 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_039558080.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(180759..180850,181100..187720)
location: region:180759-187720:1
so has part: feature:180759-180850:1:exon
so has part: feature:181100-187720:1:exon

position:180759:1
position: 180759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180759-180850:1:exon

position:180850:1
position: 180850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181100-187720:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MRAGHERSQECLPPKKRELAAANTGTEAGRAGGAQGSGEGPEWARTAGPAPAAPRYGPGEAPEAAAGLTVDQYGMLYKVAAPPATFSPTGLHPVVNVSPLPPAFNVTSPIIQHPGVPFPSIHYAQIPSASLQLIGSHYTVPYAVPPAFLPSPLLSPSTNLTAPHVPHFVPYASLFTEEAAPSPQTTSPTHSFNKSTSAASPGQMQHHAAPQPLDMAPGRIPVYYQMSRLPPGYSAYEAPVAGGSPESPQHHSQLSSEVAAANGGQRPLEQSVASRPSEAVDSASSAAEDCLPPGAAAGCMGDGQFLPGYQMLGREISVPTHRSTPDADLEVQRVVGVLAAQDYHVLAAQRKDDPSPLNLCHNIPDGQGDMPRNTTDRAAAGNSQSQSPCGMSPEETVRQRQLTKGMVIANGKPVLVPVGSEPVRSSTSEALVRESPDAQARGNVLEKELAHLQPPSSSQLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANSPLTDQLVSARERLERTAQGPREPSDRAAERKSHTDRANMVQSSHAESSQPEAGSLYSLATGFQRYSVQAEEPRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 181210..183276
location: region:181210-183276:1
so has part: feature:181210-183276:1:exon

XP_039414014.1
type: Protein
SIO_000068: ncbiprotein

position:181210:1
position: 181210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183276:1
position: 183276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181210-183276:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MRAGHERSQECLPPKKRELAAANTGTEAGRAGGAQGSGEGPEWARTAGPAPAAPRYGPGEAPEAAAGLTVDQYGMLYKVAAPPATFSPTGLHPVVNVSPLPPAFNVTSPIIQHPGVPFPSIHYAQIPSASLQLIGSHYTVPYAVPPAFLPSPLLSPSTNLTAPHVPHFVPYASLFTEEAAPSPQTTSPTHSFNKSTSAASPGQMQHHAAPQPLDMAPGRIPVYYQMSRLPPGYSAYEAPVAGGSPESPQHHSQLSSEVAAANGGQRPLEQSVASRPSEAVDSASSAAEDCLPPGAAAGCMGDGQFLPGYQMLGREISVPTHRSTPDADLEVQRVVGVLAAQDYHVLAAQRKDDPSPLNLCHNIPDGQGDMPRNTTDRAAAGNSQSQSPCGMSPEETVRQRQLTKGMVIANGKPVLVPVGSEPVRSSTSEALVRESPDAQARGNVLEKELAHLQPPSSSQLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANSPLTDQLVSARERLERTAQGPREPSDRAAERKSHTDRANMVQSSHAESSQPEAGSLYSLATGFQRYSVQAEEPRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 181210..183276
location: region:181210-183276:1
so has part: feature:181210-183276:1:exon

XP_039414015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181210-183276:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189535..201924)
location: region:189535-201924:-1
so has part: feature:189535-201924:-1:exon
subclass of: SO_0000010

104691863
type: Gene
SIO_000068: ncbigene

position:189535:-1
position: 189535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201924:-1
position: 201924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189535-201924:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039558087.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189535..190454,191164..191330,192215..192319,192856..192998,193434..193559,200309..200400,201277..201488))
location: region:189535-201488:-1
so has part: feature:201277-201488:-1:exon
so has part: feature:200309-200400:-1:exon
so has part: feature:193434-193559:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189535-190454:-1:exon

position:201488:-1
position: 201488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201277-201488:-1:exon

position:201277:-1
position: 201277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200309-200400:-1:exon

position:200309:-1
position: 200309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200400:-1
position: 200400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193434-193559:-1:exon

position:193434:-1
position: 193434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193559:-1
position: 193559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192856-192998:-1:exon

position:192856:-1
position: 192856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192998:-1
position: 192998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192215-192319:-1:exon

position:192215:-1
position: 192215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192319:-1
position: 192319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:191164-191330:-1:exon

position:191164:-1
position: 191164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191330:-1
position: 191330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189535-190454:-1:exon

position:190454:-1
position: 190454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_010403555.4
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189535..190454,191164..191330,192215..192319,192856..192998,193434..196848,200309..200396))
location: region:189535-200396:-1
so has part: feature:200309-200396:-1:exon
so has part: feature:193434-196848:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189535-190454:-1:exon

position:200396:-1
position: 200396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200309-200396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193434-196848:-1:exon

position:196848:-1
position: 196848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189535-190454:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_010403550.4
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189535..190454,191164..191330,192215..192319,192856..192998,193434..196848,198187..198336,200309..200396))
location: region:189535-200396:-1
so has part: feature:200309-200396:-1:exon
so has part: feature:198187-198336:-1:exon
so has part: feature:193434-196848:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189535-190454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200309-200396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198187-198336:-1:exon

position:198187:-1
position: 198187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198336:-1
position: 198336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193434-196848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189535-190454:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_019288253.3
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189535..190454,191164..191330,192215..192319,192856..192998,193434..196848,198083..198180))
location: region:189535-198180:-1
so has part: feature:198083-198180:-1:exon
so has part: feature:193434-196848:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189535-190454:-1:exon

position:198180:-1
position: 198180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198083-198180:-1:exon

position:198083:-1
position: 198083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193434-196848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189535-190454:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_039558086.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189538..190454,191164..191330,192215..192319,192856..192998,193434..193559,200309..200400,201495..201647,201834..201924))
location: region:189538-201924:-1
so has part: feature:201834-201924:-1:exon
so has part: feature:201495-201647:-1:exon
so has part: feature:200309-200400:-1:exon
so has part: feature:193434-193559:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189538-190454:-1:exon

position:189538:-1
position: 189538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201834-201924:-1:exon

position:201834:-1
position: 201834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201495-201647:-1:exon

position:201495:-1
position: 201495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201647:-1
position: 201647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200309-200400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193434-193559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189538-190454:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_039558084.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189538..190454,191164..191330,192215..192319,192856..192998,193434..196848,198187..198270,200309..200400,201495..201647,201834..201924))
location: region:189538-201924:-1
so has part: feature:201834-201924:-1:exon
so has part: feature:201495-201647:-1:exon
so has part: feature:200309-200400:-1:exon
so has part: feature:198187-198270:-1:exon
so has part: feature:193434-196848:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189538-190454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201834-201924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201495-201647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200309-200400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198187-198270:-1:exon

position:198270:-1
position: 198270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:193434-196848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189538-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193559,200309..200348))
location: region:189800-200348:-1
so has part: feature:200309-200348:-1:exon
so has part: feature:193434-193559:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_039414020.1
type: Protein
SIO_000068: ncbiprotein

position:189800:-1
position: 189800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200348:-1
position: 200348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200309-200348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193434-193559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189800-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193559,200309..200348))
location: region:189800-200348:-1
so has part: feature:200309-200348:-1:exon
so has part: feature:193434-193559:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_039414021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200309-200348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193434-193559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189800-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MEAMEQHQSDSLSLWLPGEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193611))
location: region:189800-193611:-1
so has part: feature:193434-193611:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_019143798.1
type: Protein
SIO_000068: ncbiprotein

position:193611:-1
position: 193611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193434-193611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189800-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MEAMEQHQSDSLSLWLPGEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193611))
location: region:189800-193611:-1
so has part: feature:193434-193611:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_039414018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193434-193611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189800-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MEAMEQHQSDSLSLWLPGEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193611))
location: region:189800-193611:-1
so has part: feature:193434-193611:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_010401852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193434-193611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189800-190454:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MEAMEQHQSDSLSLWLPGEQVFAGLEEQARQAMMKNSFPGALGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVARTPLMRENEVPESLNADPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189800..190454,191164..191330,192215..192319,192856..192998,193434..193611))
location: region:189800-193611:-1
so has part: feature:193434-193611:-1:exon
so has part: feature:192856-192998:-1:exon
so has part: feature:192215-192319:-1:exon
so has part: feature:191164-191330:-1:exon
so has part: feature:189800-190454:-1:exon

XP_010401857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193434-193611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192856-192998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192215-192319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191164-191330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189800-190454:-1:exon

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202240..208706
location: region:202240-208706:1
so has part: feature:202240-208706:1:exon
subclass of: SO_0000010

104691862
type: Gene
SIO_000068: ncbigene

position:202240:1
position: 202240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208706:1
position: 208706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202240-208706:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558089.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202240..202330,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208702)
location: region:202240-208702:1
so has part: feature:202240-202330:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208702:1:exon

position:208702:1
position: 208702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202240-202330:1:exon

position:202330:1
position: 202330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

position:203288:1
position: 203288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203387:1
position: 203387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

position:203976:1
position: 203976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204156:1
position: 204156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

position:204397:1
position: 204397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204484:1
position: 204484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

position:204762:1
position: 204762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204845:1
position: 204845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

position:205229:1
position: 205229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205339:1
position: 205339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

position:205650:1
position: 205650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205856:1
position: 205856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:206930-207022:1:exon

position:206930:1
position: 206930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207022:1
position: 207022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

position:208153:1
position: 208153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208198:1
position: 208198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208702:1:exon

position:208364:1
position: 208364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_039558090.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202251..202330,203266..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208702)
location: region:202251-208702:1
so has part: feature:202251-202330:1:exon
so has part: feature:203266-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208702:1:exon

position:202251:1
position: 202251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202251-202330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203266-203387:1:exon

position:203266:1
position: 203266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208702:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_039558091.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202265..202351,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208702)
location: region:202265-208702:1
so has part: feature:202265-202351:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208702:1:exon

position:202265:1
position: 202265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202265-202351:1:exon

position:202351:1
position: 202351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208702:1:exon

IST1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XR_005602858.1
SIO_010081: IST1
so part of: IST1
location: join(202399..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,205946..207022,208153..208198,208364..208702)
location: region:202399-208702:1
so has part: feature:202399-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:205946-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208702:1:exon

position:202399:1
position: 202399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202399-202690:1:exon

position:202690:1
position: 202690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205946-207022:1:exon

position:205946:1
position: 205946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208702:1:exon

IST1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XR_005602859.1
SIO_010081: IST1
so part of: IST1
location: join(202399..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,205946..206209,206930..207015)
location: region:202399-207015:1
so has part: feature:202399-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:205946-206209:1:exon
so has part: feature:206930-207015:1:exon

position:207015:1
position: 207015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202399-202690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205946-206209:1:exon

position:206209:1
position: 206209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:206930-207015:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039558092.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202402..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,208153..208198,208364..208706)
location: region:202402-208706:1
so has part: feature:202402-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208706:1:exon

position:202402:1
position: 202402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202402-202690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208364-208706:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_039558088.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202405..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208706)
location: region:202405-208706:1
so has part: feature:202405-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208706:1:exon

position:202405:1
position: 202405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202405-202690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208706:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MARSALGSAAAGKEKVFIMLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGSGGFTAPMIGHDGLVPMPVMMPVPMPTPNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTDKDTAALVPGPEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202649..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208563)
location: region:202649-208563:1
so has part: feature:202649-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208563:1:exon

XP_039414022.1
type: Protein
SIO_000068: ncbiprotein

position:202649:1
position: 202649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208563:1
position: 208563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202649-202690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208364-208563:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X3
translation: MARSALGSAAAGKEKVFIMLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGSGGFTAPMIGHDGLVPMPVMMPVPMPTPNPPFSYPPPKGPIDEPNTDKDTAALVPGPEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202649..202690,203288..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,208153..208198,208364..208563)
location: region:202649-208563:1
so has part: feature:202649-202690:1:exon
so has part: feature:203288-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208563:1:exon

XP_039414026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202649-202690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203288-203387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208364-208563:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGSGGFTAPMIGHDGLVPMPVMMPVPMPTPNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTDKDTAALVPGPEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203300..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208563)
location: region:203300-208563:1
so has part: feature:203300-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208563:1:exon

XP_039414023.1
type: Protein
SIO_000068: ncbiprotein

position:203300:1
position: 203300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203300-203387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208364-208563:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGSGGFTAPMIGHDGLVPMPVMMPVPMPTPNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTDKDTAALVPGPEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203300..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208563)
location: region:203300-208563:1
so has part: feature:203300-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208563:1:exon

XP_039414024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203300-203387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208364-208563:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGSGGFTAPMIGHDGLVPMPVMMPVPMPTPNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTDKDTAALVPGPEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203300..203387,203976..204156,204397..204484,204762..204845,205229..205339,205650..205856,206930..207022,208153..208198,208364..208563)
location: region:203300-208563:1
so has part: feature:203300-203387:1:exon
so has part: feature:203976-204156:1:exon
so has part: feature:204397-204484:1:exon
so has part: feature:204762-204845:1:exon
so has part: feature:205229-205339:1:exon
so has part: feature:205650-205856:1:exon
so has part: feature:206930-207022:1:exon
so has part: feature:208153-208198:1:exon
so has part: feature:208364-208563:1:exon

XP_039414025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203300-203387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203976-204156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204397-204484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204762-204845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205229-205339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205650-205856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206930-207022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208153-208198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208364-208563:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209401..212988
location: region:209401-212988:1
so has part: feature:209401-212988:1:exon
subclass of: SO_0000010

104691960
type: Gene
SIO_000068: ncbigene

position:209401:1
position: 209401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212988:1
position: 212988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209401-212988:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_039558083.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(209401..209463,209705..209893,210200..210399,210624..210706,211229..211416,211871..211984,212296..212449,212523..212682,212825..212988)
location: region:209401-212988:1
so has part: feature:209401-209463:1:exon
so has part: feature:209705-209893:1:exon
so has part: feature:210200-210399:1:exon
so has part: feature:210624-210706:1:exon
so has part: feature:211229-211416:1:exon
so has part: feature:211871-211984:1:exon
so has part: feature:212296-212449:1:exon
so has part: feature:212523-212682:1:exon
so has part: feature:212825-212988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209401-209463:1:exon

position:209463:1
position: 209463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209705-209893:1:exon

position:209705:1
position: 209705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209893:1
position: 209893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210200-210399:1:exon

position:210200:1
position: 210200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210399:1
position: 210399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210624-210706:1:exon

position:210624:1
position: 210624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210706:1
position: 210706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211229-211416:1:exon

position:211229:1
position: 211229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211416:1
position: 211416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211871-211984:1:exon

position:211871:1
position: 211871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211984:1
position: 211984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212296-212449:1:exon

position:212296:1
position: 212296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212449:1
position: 212449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:212523-212682:1:exon

position:212523:1
position: 212523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212682:1
position: 212682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212825-212988:1:exon

position:212825:1
position: 212825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X2
translation: MMAAPLRGRLLALGGCGLLLGSALAAGDERLYAAVMPALRALPPEAAHGLALRAAALGLLPSTRPDGPALEVRVLGQRFRNPLGLAAGFDKQCEAVDGLFKMGFGFVEVGTVTPKPQEGNPRPRVFRLAEDEAVINRYGFNSHGHVAVERRLRARQETQIRLTGAGMPLGVNLGKNKSSTDAAADYVAGVRTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLSKVLVERDLLPCEHKPAVLVKIAPDLTAQDKQDIASVVCELGVDGLIVSNTTVSRPSGLRSRQRMEPGGLSGKPLRELSTQVIREMYALTQGRVPIIGVGGVSNGQDALEKIRAGASLVQLYTALVYHGPPVVGTVKRELEELLREQGFKNVMEAVGADHRCGHAAE
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(209443..209463,209705..209893,210200..210399,210624..210706,211229..211416,211871..211984,212296..212449,212523..212682,212825..212894)
location: region:209443-212894:1
so has part: feature:209443-209463:1:exon
so has part: feature:209705-209893:1:exon
so has part: feature:210200-210399:1:exon
so has part: feature:210624-210706:1:exon
so has part: feature:211229-211416:1:exon
so has part: feature:211871-211984:1:exon
so has part: feature:212296-212449:1:exon
so has part: feature:212523-212682:1:exon
so has part: feature:212825-212894:1:exon

XP_039414017.1
type: Protein
SIO_000068: ncbiprotein

position:209443:1
position: 209443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212894:1
position: 212894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209443-209463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209705-209893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210200-210399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210624-210706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211229-211416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211871-211984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212296-212449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212523-212682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212825-212894:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558082.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(209627..209893,210200..210399,210624..210706,211229..211416,211871..211984,212296..212449,212523..212682,212825..212988)
location: region:209627-212988:1
so has part: feature:209627-209893:1:exon
so has part: feature:210200-210399:1:exon
so has part: feature:210624-210706:1:exon
so has part: feature:211229-211416:1:exon
so has part: feature:211871-211984:1:exon
so has part: feature:212296-212449:1:exon
so has part: feature:212523-212682:1:exon
so has part: feature:212825-212988:1:exon

position:209627:1
position: 209627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209627-209893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210200-210399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210624-210706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211229-211416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211871-211984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212296-212449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212523-212682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212825-212988:1:exon

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
translation: MGGAWVPVGDRCWGAADGLAQGRLLALGGCGLLLGSALAAGDERLYAAVMPALRALPPEAAHGLALRAAALGLLPSTRPDGPALEVRVLGQRFRNPLGLAAGFDKQCEAVDGLFKMGFGFVEVGTVTPKPQEGNPRPRVFRLAEDEAVINRYGFNSHGHVAVERRLRARQETQIRLTGAGMPLGVNLGKNKSSTDAAADYVAGVRTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLSKVLVERDLLPCEHKPAVLVKIAPDLTAQDKQDIASVVCELGVDGLIVSNTTVSRPSGLRSRQRMEPGGLSGKPLRELSTQVIREMYALTQGRVPIIGVGGVSNGQDALEKIRAGASLVQLYTALVYHGPPVVGTVKRELEELLREQGFKNVMEAVGADHRCGHAAE
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(209642..209893,210200..210399,210624..210706,211229..211416,211871..211984,212296..212449,212523..212682,212825..212894)
location: region:209642-212894:1
so has part: feature:209642-209893:1:exon
so has part: feature:210200-210399:1:exon
so has part: feature:210624-210706:1:exon
so has part: feature:211229-211416:1:exon
so has part: feature:211871-211984:1:exon
so has part: feature:212296-212449:1:exon
so has part: feature:212523-212682:1:exon
so has part: feature:212825-212894:1:exon

XP_039414016.1
type: Protein
SIO_000068: ncbiprotein

position:209642:1
position: 209642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209642-209893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210200-210399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210624-210706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211229-211416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211871-211984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212296-212449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212523-212682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212825-212894:1:exon

LOC104691959
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 216432..217169
location: region:216432-217169:1
so has part: feature:216432-217169:1:exon
subclass of: SO_0000010

104691959
type: Gene
SIO_000068: ncbigene

position:216432:1
position: 216432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217169:1
position: 217169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216432-217169:1:exon

LOC104691959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691959
product: haptoglobin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019288246.2
SIO_010081: LOC104691959
subclass of: SO_0000673
so part of: LOC104691959
location: 216432..217169
location: region:216432-217169:1
so has part: feature:216432-217169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216432-217169:1:exon

LOC104691959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691959
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: haptoglobin
translation: MVTRHNLTVRATLIGDQWLLNTGRNVYLNIHSENATLEEIAPTLQLFLGSREQPNLAFERVVLHPSYPQAVDLALLKLKQKVLLGEEVKRICLAQKGYVHPGQVGYISGWGCSATFSFPDRLMKYVMLLVAESEQCWEYYSAQDVSYWVQPMLGNDTFCVGMSELREDPCYGDAGGAFAVQDPDDDTWYAGGIVSYDKTCTAAKYGVDVKHVVAWVKETVAAG
SIO_010081: LOC104691959
subclass of: SO_0000673
so part of: LOC104691959
location: 216453..217126
location: region:216453-217126:1
so has part: feature:216453-217126:1:exon

XP_019143791.2
type: Protein
SIO_000068: ncbiprotein

position:216453:1
position: 216453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217126:1
position: 217126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216453-217126:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217605..227238
location: region:217605-227238:1
so has part: feature:217605-227238:1:exon
subclass of: SO_0000010

104691958
type: Gene
SIO_000068: ncbigene

position:217605:1
position: 217605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227238:1
position: 227238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217605-227238:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DHX38
product: DEAH-box helicase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558076.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(217605..218129,218361..218548,218705..218806,219216..219381,219487..219605,219716..219792,219879..220034,220616..220777,220863..220970,221836..221948,222051..222188,222405..222591,222682..222867,223285..223425,223645..223755,223831..223947,224182..224289,224403..224515,225018..225226,225312..225466,225546..225701,225777..225911,225990..226115,226498..226593,226760..226881,227002..227238)
location: region:217605-227238:1
so has part: feature:217605-218129:1:exon
so has part: feature:218361-218548:1:exon
so has part: feature:218705-218806:1:exon
so has part: feature:219216-219381:1:exon
so has part: feature:219487-219605:1:exon
so has part: feature:219716-219792:1:exon
so has part: feature:219879-220034:1:exon
so has part: feature:220616-220777:1:exon
so has part: feature:220863-220970:1:exon
so has part: feature:221836-221948:1:exon
so has part: feature:222051-222188:1:exon
so has part: feature:222405-222591:1:exon
so has part: feature:222682-222867:1:exon
so has part: feature:223285-223425:1:exon
so has part: feature:223645-223755:1:exon
so has part: feature:223831-223947:1:exon
so has part: feature:224182-224289:1:exon
so has part: feature:224403-224515:1:exon
so has part: feature:225018-225226:1:exon
so has part: feature:225312-225466:1:exon
so has part: feature:225546-225701:1:exon
so has part: feature:225777-225911:1:exon
so has part: feature:225990-226115:1:exon
so has part: feature:226498-226593:1:exon
so has part: feature:226760-226881:1:exon
so has part: feature:227002-227238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217605-218129:1:exon

position:218129:1
position: 218129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218361-218548:1:exon

position:218361:1
position: 218361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218548:1
position: 218548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218705-218806:1:exon

position:218705:1
position: 218705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218806:1
position: 218806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219216-219381:1:exon

position:219216:1
position: 219216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219381:1
position: 219381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219487-219605:1:exon

position:219487:1
position: 219487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219605:1
position: 219605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219716-219792:1:exon

position:219716:1
position: 219716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219792:1
position: 219792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219879-220034:1:exon

position:219879:1
position: 219879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220034:1
position: 220034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220616-220777:1:exon

position:220616:1
position: 220616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220777:1
position: 220777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:220863-220970:1:exon

position:220863:1
position: 220863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220970:1
position: 220970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:221836-221948:1:exon

position:221836:1
position: 221836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221948:1
position: 221948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:222051-222188:1:exon

position:222051:1
position: 222051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222188:1
position: 222188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:222405-222591:1:exon

position:222405:1
position: 222405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222591:1
position: 222591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:222682-222867:1:exon

position:222682:1
position: 222682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222867:1
position: 222867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:223285-223425:1:exon

position:223285:1
position: 223285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223425:1
position: 223425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:223645-223755:1:exon

position:223645:1
position: 223645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223755:1
position: 223755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:223831-223947:1:exon

position:223831:1
position: 223831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223947:1
position: 223947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:224182-224289:1:exon

position:224182:1
position: 224182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224289:1
position: 224289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:224403-224515:1:exon

position:224403:1
position: 224403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224515:1
position: 224515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:225018-225226:1:exon

position:225018:1
position: 225018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225226:1
position: 225226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:225312-225466:1:exon

position:225312:1
position: 225312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225466:1
position: 225466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:225546-225701:1:exon

position:225546:1
position: 225546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225701:1
position: 225701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:225777-225911:1:exon

position:225777:1
position: 225777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225911:1
position: 225911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:225990-226115:1:exon

position:225990:1
position: 225990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226115:1
position: 226115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:226498-226593:1:exon

position:226498:1
position: 226498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226593:1
position: 226593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:226760-226881:1:exon

position:226760:1
position: 226760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226881:1
position: 226881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:227002-227238:1:exon

position:227002:1
position: 227002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
translation: MAAASEDSLHRLSGTSLSGEAGGLVLRTRGAEQHVFKAPAPRVSLLGLDVLAAQKRRERQEEAAGGKRSRVASYKDWEEGRDEAGSAEDEEEDEADRSDRRARRNRHYRSVHVETPSYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKRDREERDRSHHSRSERDGSSERSGRRSEPESPRHRPKDAATPSRSSWEEDDGGYSNARRSQWESPSPAPSYRDSERSHRVSSLRDTDRRERDRSVRSRYSDKTPLPTPSYKYNEWADDRRHLGATPRLSRGKGRRTEGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(217813..218129,218361..218548,218705..218806,219216..219381,219487..219605,219716..219792,219879..220034,220616..220777,220863..220970,221836..221948,222051..222188,222405..222591,222682..222867,223285..223425,223645..223755,223831..223947,224182..224289,224403..224515,225018..225226,225312..225466,225546..225701,225777..225911,225990..226115,226498..226593,226760..226881,227002..227086)
location: region:217813-227086:1
so has part: feature:217813-218129:1:exon
so has part: feature:218361-218548:1:exon
so has part: feature:218705-218806:1:exon
so has part: feature:219216-219381:1:exon
so has part: feature:219487-219605:1:exon
so has part: feature:219716-219792:1:exon
so has part: feature:219879-220034:1:exon
so has part: feature:220616-220777:1:exon
so has part: feature:220863-220970:1:exon
so has part: feature:221836-221948:1:exon
so has part: feature:222051-222188:1:exon
so has part: feature:222405-222591:1:exon
so has part: feature:222682-222867:1:exon
so has part: feature:223285-223425:1:exon
so has part: feature:223645-223755:1:exon
so has part: feature:223831-223947:1:exon
so has part: feature:224182-224289:1:exon
so has part: feature:224403-224515:1:exon
so has part: feature:225018-225226:1:exon
so has part: feature:225312-225466:1:exon
so has part: feature:225546-225701:1:exon
so has part: feature:225777-225911:1:exon
so has part: feature:225990-226115:1:exon
so has part: feature:226498-226593:1:exon
so has part: feature:226760-226881:1:exon
so has part: feature:227002-227086:1:exon

XP_039414010.1
type: Protein
SIO_000068: ncbiprotein

position:217813:1
position: 217813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227086:1
position: 227086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217813-218129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218361-218548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218705-218806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219216-219381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219487-219605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219716-219792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219879-220034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220616-220777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220863-220970:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:221836-221948:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:222051-222188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:222405-222591:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:222682-222867:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223285-223425:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223645-223755:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223831-223947:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:224182-224289:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:224403-224515:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225018-225226:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:225312-225466:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:225546-225701:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:225777-225911:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:225990-226115:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226498-226593:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:226760-226881:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:227002-227086:1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(328994..728875)
location: region:328994-728875:-1
so has part: feature:328994-728875:-1:exon
subclass of: SO_0000010

104691956
type: Gene
SIO_000068: ncbigene

position:328994:-1
position: 328994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728875:-1
position: 728875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328994-728875:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: ZFHX3
product: zinc finger homeobox 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039558074.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(328994..334234,336870..342323,342818..342920,350097..350297,350488..350621,359373..359480,386151..386382,409994..410490,412443..415183,471528..471836,525789..525899,653172..653276,728760..728875))
location: region:328994-728875:-1
so has part: feature:728760-728875:-1:exon
so has part: feature:653172-653276:-1:exon
so has part: feature:525789-525899:-1:exon
so has part: feature:471528-471836:-1:exon
so has part: feature:412443-415183:-1:exon
so has part: feature:409994-410490:-1:exon
so has part: feature:386151-386382:-1:exon
so has part: feature:359373-359480:-1:exon
so has part: feature:350488-350621:-1:exon
so has part: feature:350097-350297:-1:exon
so has part: feature:342818-342920:-1:exon
so has part: feature:336870-342323:-1:exon
so has part: feature:328994-334234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728760-728875:-1:exon

position:728760:-1
position: 728760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653172-653276:-1:exon

position:653172:-1
position: 653172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653276:-1
position: 653276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525789-525899:-1:exon

position:525789:-1
position: 525789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525899:-1
position: 525899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471528-471836:-1:exon

position:471528:-1
position: 471528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471836:-1
position: 471836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412443-415183:-1:exon

position:412443:-1
position: 412443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415183:-1
position: 415183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409994-410490:-1:exon

position:409994:-1
position: 409994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410490:-1
position: 410490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:386151-386382:-1:exon

position:386151:-1
position: 386151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386382:-1
position: 386382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:359373-359480:-1:exon

position:359373:-1
position: 359373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359480:-1
position: 359480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:350488-350621:-1:exon

position:350488:-1
position: 350488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350621:-1
position: 350621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:350097-350297:-1:exon

position:350097:-1
position: 350097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350297:-1
position: 350297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342818-342920:-1:exon

position:342818:-1
position: 342818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342920:-1
position: 342920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:336870-342323:-1:exon

position:336870:-1
position: 336870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342323:-1
position: 342323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:328994-334234:-1:exon

position:334234:-1
position: 334234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: ZFHX3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSAHLPDPAGSMEQPAAESCSPLDSLRVPFPERVPESSAAGPGAEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGEEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGAGGSGTLPSLLPNSLPKQGEPSATAPVYPQIINTFHIASSFGKWFESSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSAANLIGPGHSFYGKFSGICMEGEQALQAGAAGGAERPATGVLAPSALLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGDDQDSLLEKVEPAEEVEEEEEEDVEEEEEEEEEEEEEEDEDDEGCKGLFPNELEDELEDRPQEDVGAVAGSGSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGASVAEGSRRLDFIDESANKDNATAPEPNESAEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDGQFMMGGFQLDPTNPMATMAPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAAEAEEPSEDVEGPSETAGDAEEPAKEQESGGDKDQSKWTAPASQPEKELTEPPASSKRIAFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAAAPEKDGNSGAEELGKQSEISEDVGKTLLPSDSAEHSGDPKPTPADPSAAREDSGFLCWKKGCSQVFKSSAALQTHFNDVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGASSNGAGNSSSSSLSLGSSTPSPVSASNSNAFATTSTSTSGTTPIPSLLNQVSSDSVGIPPLGNAVSTNISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHSVLLQQSQHPEKKNKSVVKEKDKETPRERESAERGDNNVTLKESLPDNLKPKEKKDFVPGSSSEPSILPPRIASDARGNATKALLENFGFELVIQYNENKQKGQKKNGKTEQGENLEKLECDTCGKFFSNILILKSH…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(332667..334234,336870..342323,342818..342920,350097..350297,350488..350621,359373..359480,386151..386382,409994..410490,412443..415137))
location: region:332667-415137:-1
so has part: feature:412443-415137:-1:exon
so has part: feature:409994-410490:-1:exon
so has part: feature:386151-386382:-1:exon
so has part: feature:359373-359480:-1:exon
so has part: feature:350488-350621:-1:exon
so has part: feature:350097-350297:-1:exon
so has part: feature:342818-342920:-1:exon
so has part: feature:336870-342323:-1:exon
so has part: feature:332667-334234:-1:exon

XP_039414008.1
type: Protein
SIO_000068: ncbiprotein

position:332667:-1
position: 332667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415137:-1
position: 415137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412443-415137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409994-410490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386151-386382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359373-359480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350488-350621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350097-350297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342818-342920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:336870-342323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:332667-334234:-1:exon

LOC109145153
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 457355..462142
location: region:457355-462142:1
so has part: feature:457355-462142:1:exon
subclass of: SO_0000011

109145153
type: Gene
SIO_000068: ncbigene

position:457355:1
position: 457355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462142:1
position: 462142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457355-462142:1:exon

LOC109145153
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145153
product: uncharacterized LOC109145153
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_002046416.3
SIO_010081: LOC109145153
subclass of: SO_0000673
so part of: LOC109145153
location: join(457355..461184,461856..462142)
location: region:457355-462142:1
so has part: feature:457355-461184:1:exon
so has part: feature:461856-462142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457355-461184:1:exon

position:461184:1
position: 461184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461856-462142:1:exon

position:461856:1
position: 461856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120410582
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 518859..522055
location: region:518859-522055:1
so has part: feature:518859-522055:1:exon
subclass of: SO_0000011

120410582
type: Gene
SIO_000068: ncbigene

position:518859:1
position: 518859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522055:1
position: 522055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518859-522055:1:exon

LOC120410582
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410582
product: uncharacterized LOC120410582, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005602865.1
SIO_010081: LOC120410582
subclass of: SO_0000673
so part of: LOC120410582
location: join(518859..521049,521846..522055)
location: region:518859-522055:1
so has part: feature:518859-521049:1:exon
so has part: feature:521846-522055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518859-521049:1:exon

position:521049:1
position: 521049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521846-522055:1:exon

position:521846:1
position: 521846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120410582
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410582
product: uncharacterized LOC120410582, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005602864.1
SIO_010081: LOC120410582
subclass of: SO_0000673
so part of: LOC120410582
location: join(518859..521049,521849..522055)
location: region:518859-522055:1
so has part: feature:518859-521049:1:exon
so has part: feature:521849-522055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518859-521049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521849-522055:1:exon

position:521849:1
position: 521849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109145151
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC109145151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 610327..618805
location: region:610327-618805:1
so has part: feature:610327-618805:1:exon
subclass of: SO_0000011

109145151
type: Gene
SIO_000068: ncbigene

position:610327:1
position: 610327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618805:1
position: 618805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610327-618805:1:exon

LOC109145151
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145151
product: uncharacterized LOC109145151, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002046414.1
SIO_010081: LOC109145151
subclass of: SO_0000673
so part of: LOC109145151
location: join(610327..610457,610875..610948,616657..616776,617174..617317,617412..618805)
location: region:610327-618805:1
so has part: feature:610327-610457:1:exon
so has part: feature:610875-610948:1:exon
so has part: feature:616657-616776:1:exon
so has part: feature:617174-617317:1:exon
so has part: feature:617412-618805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610327-610457:1:exon

position:610457:1
position: 610457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610875-610948:1:exon

position:610875:1
position: 610875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610948:1
position: 610948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616657-616776:1:exon

position:616657:1
position: 616657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616776:1
position: 616776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617174-617317:1:exon

position:617174:1
position: 617174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617317:1
position: 617317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617412-618805:1:exon

position:617412:1
position: 617412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109145151
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145151
product: uncharacterized LOC109145151, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002046411.2
SIO_010081: LOC109145151
subclass of: SO_0000673
so part of: LOC109145151
location: join(610464..610555,610875..610948,615306..616255,616657..616776,617174..617317,617412..618805)
location: region:610464-618805:1
so has part: feature:610464-610555:1:exon
so has part: feature:610875-610948:1:exon
so has part: feature:615306-616255:1:exon
so has part: feature:616657-616776:1:exon
so has part: feature:617174-617317:1:exon
so has part: feature:617412-618805:1:exon

position:610464:1
position: 610464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610464-610555:1:exon

position:610555:1
position: 610555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610875-610948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615306-616255:1:exon

position:615306:1
position: 615306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616255:1
position: 616255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616657-616776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617174-617317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617412-618805:1:exon

LOC109145151
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145151
product: uncharacterized LOC109145151, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002046410.1
SIO_010081: LOC109145151
subclass of: SO_0000673
so part of: LOC109145151
location: join(610464..610555,610875..610948,616657..616776,617174..617317,617412..618805)
location: region:610464-618805:1
so has part: feature:610464-610555:1:exon
so has part: feature:610875-610948:1:exon
so has part: feature:616657-616776:1:exon
so has part: feature:617174-617317:1:exon
so has part: feature:617412-618805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610464-610555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610875-610948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616657-616776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617174-617317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617412-618805:1:exon

LOC109145151
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC109145151
product: uncharacterized LOC109145151, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005602863.1
SIO_010081: LOC109145151
subclass of: SO_0000673
so part of: LOC109145151
location: join(610468..610555,610798..610948,616657..616776,617174..617317,617412..618805)
location: region:610468-618805:1
so has part: feature:610468-610555:1:exon
so has part: feature:610798-610948:1:exon
so has part: feature:616657-616776:1:exon
so has part: feature:617174-617317:1:exon
so has part: feature:617412-618805:1:exon

position:610468:1
position: 610468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610468-610555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610798-610948:1:exon

position:610798:1
position: 610798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616657-616776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617174-617317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617412-618805:1:exon

LOC120410580
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC120410580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792339..829616)
location: region:792339-829616:-1
so has part: feature:792339-829616:-1:exon
subclass of: SO_0000011

120410580
type: Gene
SIO_000068: ncbigene

position:792339:-1
position: 792339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829616:-1
position: 829616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792339-829616:-1:exon

LOC120410580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 932674
nc RNA class: lncRNA
gene: LOC120410580
product: uncharacterized LOC120410580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005602857.1
SIO_010081: LOC120410580
subclass of: SO_0000673
so part of: LOC120410580
location: complement(join(792339..792886,792992..793099,829212..829306,829424..829616))
location: region:792339-829616:-1
so has part: feature:829424-829616:-1:exon
so has part: feature:829212-829306:-1:exon
so has part: feature:792992-793099:-1:exon
so has part: feature:792339-792886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829424-829616:-1:exon

position:829424:-1
position: 829424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829212-829306:-1:exon

position:829212:-1
position: 829212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829306:-1
position: 829306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792992-793099:-1:exon

position:792992:-1
position: 792992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793099:-1
position: 793099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792339-792886:-1:exon

position:792886:-1
position: 792886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 830441..833820
location: region:830441-833820:1
so has part: feature:830441-833820:1:exon
subclass of: SO_0000010

104691955
type: Gene
SIO_000068: ncbigene

position:830441:1
position: 830441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833820:1
position: 833820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830441-833820:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558245.1
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(830441..830592,831094..831185,831445..831537,832027..832124,832401..832481,833020..833111,833336..833820)
location: region:830441-833820:1
so has part: feature:830441-830592:1:exon
so has part: feature:831094-831185:1:exon
so has part: feature:831445-831537:1:exon
so has part: feature:832027-832124:1:exon
so has part: feature:832401-832481:1:exon
so has part: feature:833020-833111:1:exon
so has part: feature:833336-833820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830441-830592:1:exon

position:830592:1
position: 830592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831094-831185:1:exon

position:831094:1
position: 831094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831185:1
position: 831185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831445-831537:1:exon

position:831445:1
position: 831445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831537:1
position: 831537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:832027-832124:1:exon

position:832027:1
position: 832027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832124:1
position: 832124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:832401-832481:1:exon

position:832401:1
position: 832401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832481:1
position: 832481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833020-833111:1:exon

position:833020:1
position: 833020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833111:1
position: 833111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:833336-833820:1:exon

position:833336:1
position: 833336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MPELAVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVALGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDGKKEEKKEKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(830519..830592,831094..831185,831445..831537,832027..832124,832401..832481,833020..833111,833336..833774)
location: region:830519-833774:1
so has part: feature:830519-830592:1:exon
so has part: feature:831094-831185:1:exon
so has part: feature:831445-831537:1:exon
so has part: feature:832027-832124:1:exon
so has part: feature:832401-832481:1:exon
so has part: feature:833020-833111:1:exon
so has part: feature:833336-833774:1:exon

XP_039414179.1
type: Protein
SIO_000068: ncbiprotein

position:830519:1
position: 830519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833774:1
position: 833774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830519-830592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831094-831185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831445-831537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832027-832124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832401-832481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833020-833111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833336-833774:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(834458..866860)
location: region:834458-866860:-1
so has part: feature:834458-866860:-1:exon
subclass of: SO_0000010

104691954
type: Gene
SIO_000068: ncbigene

position:834458:-1
position: 834458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866860:-1
position: 866860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834458-866860:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039558242.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(834458..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840929,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864767,866560..866654))
location: region:834458-866654:-1
so has part: feature:866560-866654:-1:exon
so has part: feature:864684-864767:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840929:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:834458-835452:-1:exon

position:866654:-1
position: 866654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866560-866654:-1:exon

position:866560:-1
position: 866560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864684-864767:-1:exon

position:864684:-1
position: 864684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864767:-1
position: 864767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863953-864100:-1:exon

position:863953:-1
position: 863953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864100:-1
position: 864100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863579-863697:-1:exon

position:863579:-1
position: 863579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863697:-1
position: 863697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858550-858686:-1:exon

position:858550:-1
position: 858550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858686:-1
position: 858686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:857706-857803:-1:exon

position:857706:-1
position: 857706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857803:-1
position: 857803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:853159-853394:-1:exon

position:853159:-1
position: 853159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853394:-1
position: 853394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:850565-850781:-1:exon

position:850565:-1
position: 850565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850781:-1
position: 850781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:846209-846298:-1:exon

position:846209:-1
position: 846209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846298:-1
position: 846298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:845714-845888:-1:exon

position:845714:-1
position: 845714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845888:-1
position: 845888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:842814-842868:-1:exon

position:842814:-1
position: 842814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842868:-1
position: 842868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:841222-841303:-1:exon

position:841222:-1
position: 841222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841303:-1
position: 841303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:840798-840929:-1:exon

position:840798:-1
position: 840798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840929:-1
position: 840929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:840579-840657:-1:exon

position:840579:-1
position: 840579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840657:-1
position: 840657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:840394-840465:-1:exon

position:840394:-1
position: 840394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840465:-1
position: 840465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:840205-840293:-1:exon

position:840205:-1
position: 840205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840293:-1
position: 840293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:839000-839159:-1:exon

position:839000:-1
position: 839000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839159:-1
position: 839159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:837948-838081:-1:exon

position:837948:-1
position: 837948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838081:-1
position: 838081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:837683-837823:-1:exon

position:837683:-1
position: 837683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837823:-1
position: 837823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:837026-837146:-1:exon

position:837026:-1
position: 837026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837146:-1
position: 837146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:836631-836735:-1:exon

position:836631:-1
position: 836631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836735:-1
position: 836735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:836441-836537:-1:exon

position:836441:-1
position: 836441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836537:-1
position: 836537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:835586-835658:-1:exon

position:835586:-1
position: 835586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835658:-1
position: 835658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:834458-835452:-1:exon

position:835452:-1
position: 835452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019288332.2
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(834458..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840926,841045..841158))
location: region:834458-841158:-1
so has part: feature:841045-841158:-1:exon
so has part: feature:840798-840926:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:834458-835452:-1:exon

position:841158:-1
position: 841158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841045-841158:-1:exon

position:841045:-1
position: 841045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:840798-840926:-1:exon

position:840926:-1
position: 840926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:834458-835452:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039558243.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(834460..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840926,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864767,866778..866860))
location: region:834460-866860:-1
so has part: feature:866778-866860:-1:exon
so has part: feature:864684-864767:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840926:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:834460-835452:-1:exon

position:834460:-1
position: 834460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866778-866860:-1:exon

position:866778:-1
position: 866778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864684-864767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863953-864100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863579-863697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858550-858686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857706-857803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:853159-853394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850565-850781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846209-846298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:845714-845888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842814-842868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841222-841303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840798-840926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:834460-835452:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039558241.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(834460..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840929,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864767,866778..866860))
location: region:834460-866860:-1
so has part: feature:866778-866860:-1:exon
so has part: feature:864684-864767:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840929:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:834460-835452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866778-866860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864684-864767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863953-864100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863579-863697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858550-858686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857706-857803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:853159-853394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850565-850781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846209-846298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:845714-845888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842814-842868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841222-841303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840798-840929:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:834460-835452:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
translation: MAAASSSRARAGPPCEKSPLSVKVVSVKPKAQSRPTRMNCYVEVAGDGLPSETKKTGKQMGVSELLWNEVLTLNVTAQSHLELKVWICHTLRNELLGAASISLGSLLKGSGKLENRQLTLDLQTENKGSIVSGGELTIFLDGPAVALGSVPDGSAGTEGSQVPGRDPTSTPVATEGWHQPPSTNCSGSRPRTHRHVAGAARGNAGSGEQSPSARSRHRQQAKSSQHTSTATSMANGTATSMANGIATGAATSTANGTATGMANGVANGTVNGDAVGAVDMDEDRPAAGASVPTPAASGTADGSAAPALPALSSSGEAEEAASGPSAPPARAAVLTLDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(835353..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840926,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864753))
location: region:835353-864753:-1
so has part: feature:864684-864753:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840926:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:835353-835452:-1:exon

XP_039414177.1
type: Protein
SIO_000068: ncbiprotein

position:835353:-1
position: 835353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864753:-1
position: 864753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864684-864753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863953-864100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863579-863697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858550-858686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857706-857803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853159-853394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850565-850781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846209-846298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845714-845888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842814-842868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841222-841303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840798-840926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835353-835452:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MAAASSSRARAGPPCEKSPLSVKVVSVKPKAQSRPTRMNCYVEVAGDGLPSETKKTGKQMGVSELLWNEVLTLNVTAQSHLELKVWICHTLRNELLGAASISLGSLLKGSGKLENRQLTLDLQTENKGSIVSGGELTIFLDGPAVALGSVPDGSAGTEGSQVPGRDPTSTPVATEGWHQPPSTNCSGSRPRTHRHVAGAARGNAGSGEQSPSARSRHRQQAKSSQHTSTATSMANGTATSMANGIATGAATSTANGTATGMANGVANGTVNGDAVGAVDMDEDRPAAGASVPTPAASGTADGSAAPALPALSSSGEAEEAASGPSAPPARAAVLTLDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGRMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(835353..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840929,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864753))
location: region:835353-864753:-1
so has part: feature:864684-864753:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840929:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:835353-835452:-1:exon

XP_039414175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864684-864753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863953-864100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863579-863697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858550-858686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857706-857803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853159-853394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850565-850781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846209-846298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845714-845888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842814-842868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841222-841303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840798-840929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835353-835452:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MAAASSSRARAGPPCEKSPLSVKVVSVKPKAQSRPTRMNCYVEVAGDGLPSETKKTGKQMGVSELLWNEVLTLNVTAQSHLELKVWICHTLRNELLGAASISLGSLLKGSGKLENRQLTLDLQTENKGSIVSGGELTIFLDGPAVALGSVPDGSAGTEGSQVPGRDPTSTPVATEGWHQPPSTNCSGSRPRTHRHVAGAARGNAGSGEQSPSARSRHRQQAKSSQHTSTATSMANGTATSMANGIATGAATSTANGTATGMANGVANGTVNGDAVGAVDMDEDRPAAGASVPTPAASGTADGSAAPALPALSSSGEAEEAASGPSAPPARAAVLTLDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGRMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(835353..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840929,841222..841303,842814..842868,845714..845888,846209..846298,850565..850781,853159..853394,857706..857803,858550..858686,863579..863697,863953..864100,864684..864753))
location: region:835353-864753:-1
so has part: feature:864684-864753:-1:exon
so has part: feature:863953-864100:-1:exon
so has part: feature:863579-863697:-1:exon
so has part: feature:858550-858686:-1:exon
so has part: feature:857706-857803:-1:exon
so has part: feature:853159-853394:-1:exon
so has part: feature:850565-850781:-1:exon
so has part: feature:846209-846298:-1:exon
so has part: feature:845714-845888:-1:exon
so has part: feature:842814-842868:-1:exon
so has part: feature:841222-841303:-1:exon
so has part: feature:840798-840929:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:835353-835452:-1:exon

XP_039414176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864684-864753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863953-864100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863579-863697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858550-858686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857706-857803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853159-853394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850565-850781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846209-846298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:845714-845888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842814-842868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841222-841303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840798-840929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835353-835452:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X3
translation: MESEALTVPWLWPECCPGRAPLAGMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(835353..835452,835586..835658,836441..836537,836631..836735,837026..837146,837683..837823,837948..838081,839000..839159,840205..840293,840394..840465,840579..840657,840798..840926,841045..841115))
location: region:835353-841115:-1
so has part: feature:841045-841115:-1:exon
so has part: feature:840798-840926:-1:exon
so has part: feature:840579-840657:-1:exon
so has part: feature:840394-840465:-1:exon
so has part: feature:840205-840293:-1:exon
so has part: feature:839000-839159:-1:exon
so has part: feature:837948-838081:-1:exon
so has part: feature:837683-837823:-1:exon
so has part: feature:837026-837146:-1:exon
so has part: feature:836631-836735:-1:exon
so has part: feature:836441-836537:-1:exon
so has part: feature:835586-835658:-1:exon
so has part: feature:835353-835452:-1:exon

XP_019143877.1
type: Protein
SIO_000068: ncbiprotein

position:841115:-1
position: 841115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841045-841115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840798-840926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840579-840657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:840394-840465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:840205-840293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:839000-839159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837948-838081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:837683-837823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:837026-837146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:836631-836735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:836441-836537:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:835586-835658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:835353-835452:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 866854..869575
location: region:866854-869575:1
so has part: feature:866854-869575:1:exon
subclass of: SO_0000010

120410591
type: Gene
SIO_000068: ncbigene

position:866854:1
position: 866854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869575:1
position: 869575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866854-869575:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_039558244.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(866854..867066,867148..867280,867424..867557,867625..867696,867774..867909,868018..868239,868477..868573,868658..868802,869210..869575)
location: region:866854-869575:1
so has part: feature:866854-867066:1:exon
so has part: feature:867148-867280:1:exon
so has part: feature:867424-867557:1:exon
so has part: feature:867625-867696:1:exon
so has part: feature:867774-867909:1:exon
so has part: feature:868018-868239:1:exon
so has part: feature:868477-868573:1:exon
so has part: feature:868658-868802:1:exon
so has part: feature:869210-869575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866854-867066:1:exon

position:867066:1
position: 867066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867148-867280:1:exon

position:867148:1
position: 867148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867280:1
position: 867280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867424-867557:1:exon

position:867424:1
position: 867424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867557:1
position: 867557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867625-867696:1:exon

position:867625:1
position: 867625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867696:1
position: 867696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867774-867909:1:exon

position:867774:1
position: 867774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867909:1
position: 867909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868018-868239:1:exon

position:868018:1
position: 868018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868239:1
position: 868239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868477-868573:1:exon

position:868477:1
position: 868477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868573:1
position: 868573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:868658-868802:1:exon

position:868658:1
position: 868658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868802:1
position: 868802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:869210-869575:1:exon

position:869210:1
position: 869210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NOB1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein NOB1
translation: MGHADMARVPHVVADTGAFLSAAPLQDIADALYTVPEVLAEIRDRPARRRLAALPCELRVRRPRPDLLRLVTEFSKKTGDYPSLSAADLQVLALTCQLQAEIDGPGCLRWEPQDKVRLSSTPRHPEAPLHLAGFHLPAKHKPAGKGPRQPXPGSGPAPPDSDEFGSFLYXRPPLPSIEEELRELLAISSSPEPLEEHPEEHRSSADGASASEEEEDEESDDEGWITPSNLKQAQQDTGHCDTAPVGVQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRXARSYILRCHGCFRTTSDMTKVFCPHCGNKTLKKVAVSVSDDGSLHMHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQRFPQQRLSRKARQKTNVFHPDYLAGPLPSPENDVAQPGPRTLHLRDAALGAGRRXLKPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(866989..867066,867148..867280,867424..867557,867625..867696,867774..867909,868018..868239,868477..868573,868658..868802,869210..869483)
location: region:866989-869483:1
so has part: feature:866989-867066:1:exon
so has part: feature:867148-867280:1:exon
so has part: feature:867424-867557:1:exon
so has part: feature:867625-867696:1:exon
so has part: feature:867774-867909:1:exon
so has part: feature:868018-868239:1:exon
so has part: feature:868477-868573:1:exon
so has part: feature:868658-868802:1:exon
so has part: feature:869210-869483:1:exon

XP_039414178.1
type: Protein
SIO_000068: ncbiprotein

position:866989:1
position: 866989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869483:1
position: 869483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866989-867066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867148-867280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867424-867557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867625-867696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867774-867909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868018-868239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868477-868573:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868658-868802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869210-869483:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(871822..928898)
location: region:871822-928898:-1
so has part: feature:871822-928898:-1:exon
subclass of: SO_0000010

104691860
type: Gene
SIO_000068: ncbigene

position:871822:-1
position: 871822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928898:-1
position: 928898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871822-928898:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_039558457.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881867,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928898))
location: region:871822-928898:-1
so has part: feature:928773-928898:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881867:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928898:-1:exon

position:928773:-1
position: 928773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

position:909117:-1
position: 909117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909242:-1
position: 909242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

position:897749:-1
position: 897749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898307:-1
position: 898307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

position:892518:-1
position: 892518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892710:-1
position: 892710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

position:889090:-1
position: 889090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889280:-1
position: 889280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

position:888110:-1
position: 888110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888282:-1
position: 888282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

position:884994:-1
position: 884994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885128:-1
position: 885128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

position:884770:-1
position: 884770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884822:-1
position: 884822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

position:883989:-1
position: 883989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884121:-1
position: 884121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

position:883369:-1
position: 883369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883446:-1
position: 883446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881867:-1:exon

position:881758:-1
position: 881758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881867:-1
position: 881867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

position:878796:-1
position: 878796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881226:-1
position: 881226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:877867-878113:-1:exon

position:877867:-1
position: 877867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878113:-1
position: 878113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

position:877025:-1
position: 877025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_039558455.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877871..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928898))
location: region:871822-928898:-1
so has part: feature:928773-928898:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877871-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

position:881870:-1
position: 881870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877871-878113:-1:exon

position:877871:-1
position: 877871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_039558454.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928898))
location: region:871822-928898:-1
so has part: feature:928773-928898:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_039558456.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877860..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928898))
location: region:871822-928898:-1
so has part: feature:928773-928898:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877860-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877860-878113:-1:exon

position:877860:-1
position: 877860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039558459.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307,909117..909205))
location: region:871822-909205:-1
so has part: feature:909117-909205:-1:exon
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

position:909205:-1
position: 909205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909117-909205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898168-898307:-1:exon

position:898168:-1
position: 898168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_039558458.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307,898768..898829,909117..909204))
location: region:871822-909204:-1
so has part: feature:909117-909204:-1:exon
so has part: feature:898768-898829:-1:exon
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

position:909204:-1
position: 909204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909117-909204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898768-898829:-1:exon

position:898768:-1
position: 898768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898829:-1
position: 898829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898168-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_010403544.4
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,898768..898829,909117..909204))
location: region:871822-909204:-1
so has part: feature:909117-909204:-1:exon
so has part: feature:898768-898829:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:909117-909204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898768-898829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039558460.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307,903078..903189))
location: region:871822-903189:-1
so has part: feature:903078-903189:-1:exon
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

position:903189:-1
position: 903189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903078-903189:-1:exon

position:903078:-1
position: 903078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898168-898307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019288256.3
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(871822..877025,877867..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,903078..903189))
location: region:871822-903189:-1
so has part: feature:903078-903189:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877867-878113:-1:exon
so has part: feature:871822-877025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903078-903189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:877867-878113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871822-877025:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSIASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881867,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928845))
location: region:877875-928845:-1
so has part: feature:928773-928845:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881867:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414391.1
type: Protein
SIO_000068: ncbiprotein

position:877875:-1
position: 877875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928845:-1
position: 928845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSIASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928845))
location: region:877875-928845:-1
so has part: feature:928773-928845:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSIASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928845))
location: region:877875-928845:-1
so has part: feature:928773-928845:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSIASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898307,909117..909242,928773..928845))
location: region:877875-928845:-1
so has part: feature:928773-928845:-1:exon
so has part: feature:909117-909242:-1:exon
so has part: feature:897749-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928773-928845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909117-909242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897749-898307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLPPLPPWAVLAAPLPPLPALPFTLPQSPTARLCKWRAAPRPWGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307))
location: region:877875-898307:-1
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898168-898307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLPPLPPWAVLAAPLPPLPALPFTLPQSPTARLCKWRAAPRPWGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307))
location: region:877875-898307:-1
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898168-898307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLPPLPPWAVLAAPLPPLPALPFTLPQSPTARLCKWRAAPRPWGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,898168..898307))
location: region:877875-898307:-1
so has part: feature:898168-898307:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_039414394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898168-898307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898278))
location: region:877875-898278:-1
so has part: feature:897749-898278:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_010401846.2
type: Protein
SIO_000068: ncbiprotein

position:898278:-1
position: 898278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897749-898278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877875-878113:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNMEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGSTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPETLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQPREVLQSDGTVVTLSQLADASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRPENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSTTSGNGALQQSPVYQQASHMMGGLSTSEDMQMQCELFSSSPGVSGSEAAAPAQQPVSNNGPAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQASGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQASFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPAQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSNQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLSQQLPETPPLPSAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(877875..878113,878796..881226,881758..881870,883369..883446,883989..884121,884770..884822,884994..885128,888110..888282,889090..889280,892518..892710,897749..898278))
location: region:877875-898278:-1
so has part: feature:897749-898278:-1:exon
so has part: feature:892518-892710:-1:exon
so has part: feature:889090-889280:-1:exon
so has part: feature:888110-888282:-1:exon
so has part: feature:884994-885128:-1:exon
so has part: feature:884770-884822:-1:exon
so has part: feature:883989-884121:-1:exon
so has part: feature:883369-883446:-1:exon
so has part: feature:881758-881870:-1:exon
so has part: feature:878796-881226:-1:exon
so has part: feature:877875-878113:-1:exon

XP_019143801.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:897749-898278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892518-892710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889090-889280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888110-888282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884994-885128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884770-884822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883989-884121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883369-883446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881758-881870:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878796-881226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877875-878113:-1:exon

LOC104691953
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(936036..945862)
location: region:936036-945862:-1
so has part: feature:936036-945862:-1:exon
subclass of: SO_0000010

104691953
type: Gene
SIO_000068: ncbigene

position:936036:-1
position: 936036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945862:-1
position: 945862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936036-945862:-1:exon

LOC104691953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691953
product: cytochrome b5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558461.1
SIO_010081: LOC104691953
subclass of: SO_0000673
so part of: LOC104691953
location: complement(join(936036..936709,937607..937638,938924..938950,939389..939517,945647..945862))
location: region:936036-945862:-1
so has part: feature:945647-945862:-1:exon
so has part: feature:939389-939517:-1:exon
so has part: feature:938924-938950:-1:exon
so has part: feature:937607-937638:-1:exon
so has part: feature:936036-936709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945647-945862:-1:exon

position:945647:-1
position: 945647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939389-939517:-1:exon

position:939389:-1
position: 939389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939517:-1
position: 939517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938924-938950:-1:exon

position:938924:-1
position: 938924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938950:-1
position: 938950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937607-937638:-1:exon

position:937607:-1
position: 937607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937638:-1
position: 937638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:936036-936709:-1:exon

position:936709:-1
position: 936709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5 isoform X1
translation: MEGGRRGEAAAAAAGGDGPAPVFTLEEVGKRNSSRETWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPNDRNKEGSKNPSMTSSGQSSFWSTWLIPIFGALVLGLMYRYYMVDGKSS
SIO_010081: LOC104691953
subclass of: SO_0000673
so part of: LOC104691953
location: complement(join(936619..936709,937607..937638,938924..938950,939389..939517,945647..945808))
location: region:936619-945808:-1
so has part: feature:945647-945808:-1:exon
so has part: feature:939389-939517:-1:exon
so has part: feature:938924-938950:-1:exon
so has part: feature:937607-937638:-1:exon
so has part: feature:936619-936709:-1:exon

XP_039414395.1
type: Protein
SIO_000068: ncbiprotein

position:936619:-1
position: 936619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945808:-1
position: 945808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945647-945808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939389-939517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938924-938950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937607-937638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936619-936709:-1:exon

LOC104691953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691953
product: cytochrome b5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039558462.1
SIO_010081: LOC104691953
subclass of: SO_0000673
so part of: LOC104691953
location: complement(join(936672..936737,937607..937638,938924..938950,939389..939517,945647..945833))
location: region:936672-945833:-1
so has part: feature:945647-945833:-1:exon
so has part: feature:939389-939517:-1:exon
so has part: feature:938924-938950:-1:exon
so has part: feature:937607-937638:-1:exon
so has part: feature:936672-936737:-1:exon

position:936672:-1
position: 936672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945833:-1
position: 945833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945647-945833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939389-939517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938924-938950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937607-937638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936672-936737:-1:exon

position:936737:-1
position: 936737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5 isoform X2
translation: MEGGRRGEAAAAAAGGDGPAPVFTLEEVGKRNSSRETWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPNDRNKEGSKNPSMTSSGQSSLLFLFLSL
SIO_010081: LOC104691953
subclass of: SO_0000673
so part of: LOC104691953
location: complement(join(936710..936737,937607..937638,938924..938950,939389..939517,945647..945808))
location: region:936710-945808:-1
so has part: feature:945647-945808:-1:exon
so has part: feature:939389-939517:-1:exon
so has part: feature:938924-938950:-1:exon
so has part: feature:937607-937638:-1:exon
so has part: feature:936710-936737:-1:exon

XP_039414396.1
type: Protein
SIO_000068: ncbiprotein

position:936710:-1
position: 936710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945647-945808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939389-939517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938924-938950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937607-937638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936710-936737:-1:exon

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 949650..955490
location: region:949650-955490:1
so has part: feature:949650-955490:1:exon
subclass of: SO_0000010

104691859
type: Gene
SIO_000068: ncbigene

position:949650:1
position: 949650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955490:1
position: 955490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949650-955490:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TERF2
product: telomeric repeat binding factor 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_039558223.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(949650..949858,949943..950038,950521..950699,950906..950992,951490..951636,951841..952373,952853..953239,953721..953806,954064..954116,954580..955490)
location: region:949650-955490:1
so has part: feature:949650-949858:1:exon
so has part: feature:949943-950038:1:exon
so has part: feature:950521-950699:1:exon
so has part: feature:950906-950992:1:exon
so has part: feature:951490-951636:1:exon
so has part: feature:951841-952373:1:exon
so has part: feature:952853-953239:1:exon
so has part: feature:953721-953806:1:exon
so has part: feature:954064-954116:1:exon
so has part: feature:954580-955490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949650-949858:1:exon

position:949858:1
position: 949858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949943-950038:1:exon

position:949943:1
position: 949943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950038:1
position: 950038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950521-950699:1:exon

position:950521:1
position: 950521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950699:1
position: 950699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950906-950992:1:exon

position:950906:1
position: 950906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950992:1
position: 950992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:951490-951636:1:exon

position:951490:1
position: 951490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951636:1
position: 951636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:951841-952373:1:exon

position:951841:1
position: 951841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952373:1
position: 952373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:952853-953239:1:exon

position:952853:1
position: 952853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953239:1
position: 953239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:953721-953806:1:exon

position:953721:1
position: 953721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953806:1
position: 953806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954064-954116:1:exon

position:954064:1
position: 954064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954116:1
position: 954116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:954580-955490:1:exon

position:954580:1
position: 954580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TERF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: telomeric repeat-binding factor 2
translation: MATRRAARQERDPDPDPDPDWAGMAALPEKTVNGWVLQFYFHRAIDAYRSGRNRDFRQFRDIMQALLVRPLDREPEMAQMLRIMQLLSRVEEGENLGKRRDPPPKVWMPILIDCTFEKESELTPLESAMLVLDFIREEFSVADKTMDAVQKMVKEAAVIVCIRNKEFDKASDIVKKHMGKEPKNQKKRNEWLAVIREKNPSHPKIKNFSYEDFQQSIFEFLKGYVDDSEPALLTLLKKTLNSEHTDKTKSSLETPKFTDGLNDQAAAPEASGRAEVPARAPEASGRAEGPARAPEVLGSGKGPARAPEVSGRVEDPARAPEPAGAAEDLEGAASPADRAAGPTAAPEIMEEASDPAATLEPMEIVIDPAATPEHLTAASDLLNGIPEPMEIAKEPAAATPELPGVSNRESQRQPPGAVTSCGISVLREAFKILSNSGDSDTLFTKLDETDLPSPKQLSPSVSHRTKRRREAENQDSETSHPPEIPQNIKNLFSISNLIVELDGSSSKSSESPDSSQEHVVSSASKPAQKLPDEPLSAQSDKSFQGKWNSSCGTEEKDSWSDEDELFANAASLEKNNSVTRNFSSKKQKWTIQESEWIKEGVKKYGEGRWKAICLKYPFQNRTPVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(949665..949858,949943..950038,950521..950699,950906..950992,951490..951636,951841..952373,952853..953239,953721..953806,954064..954116,954580..954738)
location: region:949665-954738:1
so has part: feature:949665-949858:1:exon
so has part: feature:949943-950038:1:exon
so has part: feature:950521-950699:1:exon
so has part: feature:950906-950992:1:exon
so has part: feature:951490-951636:1:exon
so has part: feature:951841-952373:1:exon
so has part: feature:952853-953239:1:exon
so has part: feature:953721-953806:1:exon
so has part: feature:954064-954116:1:exon
so has part: feature:954580-954738:1:exon

XP_039414157.1
type: Protein
SIO_000068: ncbiprotein

position:949665:1
position: 949665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954738:1
position: 954738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949665-949858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949943-950038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950521-950699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950906-950992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:951490-951636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:951841-952373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952853-953239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953721-953806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954064-954116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954580-954738:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 955627..958194
location: region:955627-958194:1
so has part: feature:955627-958194:1:exon
subclass of: SO_0000010

104691952
type: Gene
SIO_000068: ncbigene

position:955627:1
position: 955627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958194:1
position: 958194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955627-958194:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TMED6
product: transmembrane p24 trafficking protein 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010403652.3
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(955627..956359,957084..957210,957371..957522,957679..958194)
location: region:955627-958194:1
so has part: feature:955627-956359:1:exon
so has part: feature:957084-957210:1:exon
so has part: feature:957371-957522:1:exon
so has part: feature:957679-958194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955627-956359:1:exon

position:956359:1
position: 956359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957084-957210:1:exon

position:957084:1
position: 957084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957210:1
position: 957210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957371-957522:1:exon

position:957371:1
position: 957371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957522:1
position: 957522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957679-958194:1:exon

position:957679:1
position: 957679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TMED6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane emp24 domain-containing protein 6
translation: MLLLLLLALLGPAACPRTEPLSGSSQEPLFRGADRYDFAVVIPAGTVECFWQFSHQGGNFFFSYEVQRATGIGNSRNILVTANDPNGFQLGASQDVRGQINFLTKDTGFYQLCLDNQQNHFGLMQVYLNFGVYYEDFNMEHKQPAERKELNDTLEAIGVSIRRLQIHTFHMWRFYNFARMRKGADSFLLESNYNYVNWWSMAQSCVIVLSGVLQLYFLKSLFHAQTSGSQKC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(956164..956359,957084..957210,957371..957522,957679..957903)
location: region:956164-957903:1
so has part: feature:956164-956359:1:exon
so has part: feature:957084-957210:1:exon
so has part: feature:957371-957522:1:exon
so has part: feature:957679-957903:1:exon

XP_010401954.2
type: Protein
SIO_000068: ncbiprotein

position:956164:1
position: 956164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957903:1
position: 957903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956164-956359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957084-957210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957371-957522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957679-957903:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(958392..>959661)
location: region:958392-959661:-1
so has part: feature:958392-959661:-1:exon
subclass of: SO_0000010

104691950
type: Gene
SIO_000068: ncbigene

position:958392:-1
position: 958392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959661:-1
position: 959661
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958392-959661:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558579.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(958392..958721,958799..958939,959009..959146,959228..959313,959633..>959661))
location: region:958392-959661:-1
so has part: feature:959633-959661:-1:exon
so has part: feature:959228-959313:-1:exon
so has part: feature:959009-959146:-1:exon
so has part: feature:958799-958939:-1:exon
so has part: feature:958392-958721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959633-959661:-1:exon

position:959633:-1
position: 959633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959228-959313:-1:exon

position:959228:-1
position: 959228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959313:-1
position: 959313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959009-959146:-1:exon

position:959009:-1
position: 959009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959146:-1
position: 959146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958799-958939:-1:exon

position:958799:-1
position: 958799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958939:-1
position: 958939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958392-958721:-1:exon

position:958721:-1
position: 958721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: NIP7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: GRVFEKLGKYIGENIQLLVDXPDGTYCFRLHRDRVYYLSEKLLKXAASVPRESLVAPGTCFGKFTKSQKFRLSVTALDFLSPYAKYKVWVKPGSEQSFLYGNHVLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKSTQECRKVDPLAIVVFHQADVGEYVRNEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(958602..958721,958799..958939,959009..959146,959228..959313,959633..>959661))
location: region:958602-959661:-1
so has part: feature:959633-959661:-1:exon
so has part: feature:959228-959313:-1:exon
so has part: feature:959009-959146:-1:exon
so has part: feature:958799-958939:-1:exon
so has part: feature:958602-958721:-1:exon

XP_039414513.1
type: Protein
SIO_000068: ncbiprotein

position:958602:-1
position: 958602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959633-959661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959228-959313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959009-959146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958799-958939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958602-958721:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <959666..964026
location: region:959666-964026:1
so has part: feature:959666-964026:1:exon
subclass of: SO_0000010

104691949
type: Gene
SIO_000068: ncbigene

position:959666:1
position: 959666
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:964026:1
position: 964026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959666-964026:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: COG8
product: component of oligomeric golgi complex 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039558580.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(<959666..960125,960321..960510,960664..961486,962183..962351,962469..962616,963765..964026)
location: region:959666-964026:1
so has part: feature:959666-960125:1:exon
so has part: feature:960321-960510:1:exon
so has part: feature:960664-961486:1:exon
so has part: feature:962183-962351:1:exon
so has part: feature:962469-962616:1:exon
so has part: feature:963765-964026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959666-960125:1:exon

position:960125:1
position: 960125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:960321-960510:1:exon

position:960321:1
position: 960321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960510:1
position: 960510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960664-961486:1:exon

position:960664:1
position: 960664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961486:1
position: 961486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:962183-962351:1:exon

position:962183:1
position: 962183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962351:1
position: 962351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:962469-962616:1:exon

position:962469:1
position: 962469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962616:1
position: 962616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:963765-964026:1:exon

position:963765:1
position: 963765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: COG8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 8
translation: LRLRSGRIAPRRHTRGRRGPEVTGPEPAVAEVTDPEPAGPEVTRRSRRWRRRAEEARLLAWLRGPAAPGGAELAAYVSELAGAGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAAAAFGGIESRLGRLLERLPALQDACRPSPASRRHMNSLTLNRHTEILEILEIPQLMDTCVRNGYYEEALELTAYVRRLERKHSSIPVIQGIVEEVRQSAQLMLNQLIQQLRTNIPLPACLRVIGFLRRMDVLTEAELRVKFLQARDAWLRSIQASIPDHDPYVHITKTIEACRVHLFDIITQYRAIFSDEEPLVPAEGAAPGEGAIFHGWVLQKVSEFLRTLQRDLGPRVGGRLDSLLGQCMYFGLSFSRVGVDFRGQLAPLFQRVAADAFRKAVEEAVEKFGEEMNSYTLISAPAVLGGGAGVPVPTAQPGTLQPPMVLLDFPPLACFLNGLLVAFNDLRLCCPIALAQDVTACLDSALAEVTKTILAFHRAEEAAFSGREQELFTQFCTVFLEDLLPYLNRCLQVLFPPAQIAQALGVPPTQLQRFGRLGRIDVAALREPLAFLLPPAPGEEEPSPETAPDTEEERVDELGEPVSWEASGWAARIIQHEMDHLDGTLYIDRMDPRTFTNVGWMELLD
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(<959666..960125,960321..960510,960664..961486,962183..962351,962469..962616,963765..963922)
location: region:959666-963922:1
so has part: feature:959666-960125:1:exon
so has part: feature:960321-960510:1:exon
so has part: feature:960664-961486:1:exon
so has part: feature:962183-962351:1:exon
so has part: feature:962469-962616:1:exon
so has part: feature:963765-963922:1:exon

XP_039414514.1
type: Protein
SIO_000068: ncbiprotein

position:963922:1
position: 963922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959666-960125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:960321-960510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960664-961486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962183-962351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962469-962616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963765-963922:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(964527..968327)
location: region:964527-968327:-1
so has part: feature:964527-968327:-1:exon
subclass of: SO_0000010

104691948
type: Gene
SIO_000068: ncbigene

position:964527:-1
position: 964527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968327:-1
position: 968327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964527-968327:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558224.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(964527..964929,965202..965342,965450..965669,965746..965827,965931..966079,966744..966900,967013..967132,967388..967449,967565..967712,967786..967897,968223..968327))
location: region:964527-968327:-1
so has part: feature:968223-968327:-1:exon
so has part: feature:967786-967897:-1:exon
so has part: feature:967565-967712:-1:exon
so has part: feature:967388-967449:-1:exon
so has part: feature:967013-967132:-1:exon
so has part: feature:966744-966900:-1:exon
so has part: feature:965931-966079:-1:exon
so has part: feature:965746-965827:-1:exon
so has part: feature:965450-965669:-1:exon
so has part: feature:965202-965342:-1:exon
so has part: feature:964527-964929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968223-968327:-1:exon

position:968223:-1
position: 968223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:967786-967897:-1:exon

position:967786:-1
position: 967786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967897:-1
position: 967897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:967565-967712:-1:exon

position:967565:-1
position: 967565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967712:-1
position: 967712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967388-967449:-1:exon

position:967388:-1
position: 967388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967449:-1
position: 967449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:967013-967132:-1:exon

position:967013:-1
position: 967013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967132:-1
position: 967132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:966744-966900:-1:exon

position:966744:-1
position: 966744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966900:-1
position: 966900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:965931-966079:-1:exon

position:965931:-1
position: 965931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966079:-1
position: 966079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:965746-965827:-1:exon

position:965746:-1
position: 965746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965827:-1
position: 965827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:965450-965669:-1:exon

position:965450:-1
position: 965450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965669:-1
position: 965669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:965202-965342:-1:exon

position:965202:-1
position: 965202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965342:-1
position: 965342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:964527-964929:-1:exon

position:964929:-1
position: 964929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKEYLRSKDRHGKRPVREAQNDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIALPEEAARAQMFRLHLGNTPHSLTDADIQELARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRTIPGVLVDDLLTPCSPGDPGATEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNAEDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(964828..964929,965202..965342,965450..965669,965746..965827,965931..966079,966744..966900,967013..967132,967388..967449,967565..967712,967786..967897,968223..968243))
location: region:964828-968243:-1
so has part: feature:968223-968243:-1:exon
so has part: feature:967786-967897:-1:exon
so has part: feature:967565-967712:-1:exon
so has part: feature:967388-967449:-1:exon
so has part: feature:967013-967132:-1:exon
so has part: feature:966744-966900:-1:exon
so has part: feature:965931-966079:-1:exon
so has part: feature:965746-965827:-1:exon
so has part: feature:965450-965669:-1:exon
so has part: feature:965202-965342:-1:exon
so has part: feature:964828-964929:-1:exon

XP_039414158.1
type: Protein
SIO_000068: ncbiprotein

position:964828:-1
position: 964828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968243:-1
position: 968243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968223-968243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:967786-967897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967565-967712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967388-967449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:967013-967132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966744-966900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965931-966079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:965746-965827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:965450-965669:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:965202-965342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:964828-964929:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969695..976956)
location: region:969695-976956:-1
so has part: feature:969695-976956:-1:exon
subclass of: SO_0000010

104691947
type: Gene
SIO_000068: ncbigene

position:969695:-1
position: 969695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976956:-1
position: 976956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969695-976956:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SNTB2
product: syntrophin beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_039558489.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(969695..970771,970970..971151,971234..971430,971594..971736,972186..972396,972810..973020,976481..976956))
location: region:969695-976956:-1
so has part: feature:976481-976956:-1:exon
so has part: feature:972810-973020:-1:exon
so has part: feature:972186-972396:-1:exon
so has part: feature:971594-971736:-1:exon
so has part: feature:971234-971430:-1:exon
so has part: feature:970970-971151:-1:exon
so has part: feature:969695-970771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976481-976956:-1:exon

position:976481:-1
position: 976481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972810-973020:-1:exon

position:972810:-1
position: 972810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973020:-1
position: 973020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972186-972396:-1:exon

position:972186:-1
position: 972186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972396:-1
position: 972396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971594-971736:-1:exon

position:971594:-1
position: 971594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971736:-1
position: 971736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:971234-971430:-1:exon

position:971234:-1
position: 971234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971430:-1
position: 971430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970970-971151:-1:exon

position:970970:-1
position: 970970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971151:-1
position: 971151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:969695-970771:-1:exon

position:970771:-1
position: 970771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin
translation: MAVWTRACKTGLLELLLRERWVRVSAELTGETLSLTAEPGTGDPSVVNGVVNGSAEAAAPGGVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGREVILEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQGLRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLVLRCRDTATAHAWFSALHANITALLPQVLAELNATLGSGSPTAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALSSELTFATRTGSRQGVEMHVFRVETHRDLSAWTRVLVQGCHAAAELIKEVTVGCTLGGQEVQLSIHYEGGFTISRDEPGSSVLFRYPYERLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFVLHTFLSAKVTRMGLLA
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(970679..970771,970970..971151,971234..971430,971594..971736,972186..972396,972810..973020,976481..976910))
location: region:970679-976910:-1
so has part: feature:976481-976910:-1:exon
so has part: feature:972810-973020:-1:exon
so has part: feature:972186-972396:-1:exon
so has part: feature:971594-971736:-1:exon
so has part: feature:971234-971430:-1:exon
so has part: feature:970970-971151:-1:exon
so has part: feature:970679-970771:-1:exon

XP_039414423.1
type: Protein
SIO_000068: ncbiprotein

position:970679:-1
position: 970679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976910:-1
position: 976910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976481-976910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972810-973020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972186-972396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971594-971736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971234-971430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:970970-971151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:970679-970771:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(977547..982414)
location: region:977547-982414:-1
so has part: feature:977547-982414:-1:exon
subclass of: SO_0000010

104691946
type: Gene
SIO_000068: ncbigene

position:977547:-1
position: 977547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982414:-1
position: 982414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977547-982414:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: UTP4
product: UTP4 small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_039558596.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(977547..977769,978141..978251,978331..978516,978689..978784,979009..979115,979350..979509,979621..979743,979843..979907,980096..980192,980544..980635,980716..980887,981016..981224,981381..981470,981571..981655,981729..981920,982193..982414))
location: region:977547-982414:-1
so has part: feature:982193-982414:-1:exon
so has part: feature:981729-981920:-1:exon
so has part: feature:981571-981655:-1:exon
so has part: feature:981381-981470:-1:exon
so has part: feature:981016-981224:-1:exon
so has part: feature:980716-980887:-1:exon
so has part: feature:980544-980635:-1:exon
so has part: feature:980096-980192:-1:exon
so has part: feature:979843-979907:-1:exon
so has part: feature:979621-979743:-1:exon
so has part: feature:979350-979509:-1:exon
so has part: feature:979009-979115:-1:exon
so has part: feature:978689-978784:-1:exon
so has part: feature:978331-978516:-1:exon
so has part: feature:978141-978251:-1:exon
so has part: feature:977547-977769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982193-982414:-1:exon

position:982193:-1
position: 982193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:981729-981920:-1:exon

position:981729:-1
position: 981729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981920:-1
position: 981920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:981571-981655:-1:exon

position:981571:-1
position: 981571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981655:-1
position: 981655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:981381-981470:-1:exon

position:981381:-1
position: 981381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981470:-1
position: 981470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:981016-981224:-1:exon

position:981016:-1
position: 981016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981224:-1
position: 981224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980716-980887:-1:exon

position:980716:-1
position: 980716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980887:-1
position: 980887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:980544-980635:-1:exon

position:980544:-1
position: 980544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980635:-1
position: 980635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:980096-980192:-1:exon

position:980096:-1
position: 980096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980192:-1
position: 980192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:979843-979907:-1:exon

position:979843:-1
position: 979843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979907:-1
position: 979907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:979621-979743:-1:exon

position:979621:-1
position: 979621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979743:-1
position: 979743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:979350-979509:-1:exon

position:979350:-1
position: 979350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979509:-1
position: 979509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:979009-979115:-1:exon

position:979009:-1
position: 979009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979115:-1
position: 979115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:978689-978784:-1:exon

position:978689:-1
position: 978689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978784:-1
position: 978784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:978331-978516:-1:exon

position:978331:-1
position: 978331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978516:-1
position: 978516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:978141-978251:-1:exon

position:978141:-1
position: 978141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978251:-1
position: 978251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:977547-977769:-1:exon

position:977769:-1
position: 977769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog
translation: MGEFEVHRVRFFGLVPAGVRCLACHPRGARLALARTDGTVEVYNFAANYFQEKVIPGHEARSVESLCWAAGDRLFGAGLGGDITEYDLSRLSAARGVDGGGGPVWSLAANGTGSQLAIGCEDGSVKIFQVVPGGIQFERNLDRRKGRVLCLSWHPSDTHIVAGSIDFFRVIDVTSGQTVQRIMVNHHVEKAKRECVVWAIALLSRGTVVSADSFGRVQFWDWEQGTLAESHTVSTSAALSLAVSEKEDSIVVGTSTGATYQLQLLPVKLGGLEKRWVRTKPFQYHSHDVRAVAHSPTALISGGLDAQLVIRPLMEKIQKKGYDAALRKFTFPHRRLVSCARKARLLLFQFSQHLELWRLGSTEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGTWIGYSTASRFQLYRVRCDGDGVSLRKVPRVPKLLPPAYQLQFSADSDSLFVASARGSVHVLQLLEPGGCKHLHTLRPPSGCSEAVYLLAPSADGHWLAAVSGDWVIHIYNLKCFKHHCVVPTYSCAVSALAIHPSTNNLVIAYSDQQLFEFSIPEKQYTSWSRAVQSRGLHRAWLERDSPITHITFNPKNPAHILLHDTYLLCVLDKSLPLPDDSTLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDENCLVVVERPIMDFKTQLPMPVQQKKFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(977653..977769,978141..978251,978331..978516,978689..978784,979009..979115,979350..979509,979621..979743,979843..979907,980096..980192,980544..980635,980716..980887,981016..981224,981381..981470,981571..981655,981729..981920,982193..982351))
location: region:977653-982351:-1
so has part: feature:982193-982351:-1:exon
so has part: feature:981729-981920:-1:exon
so has part: feature:981571-981655:-1:exon
so has part: feature:981381-981470:-1:exon
so has part: feature:981016-981224:-1:exon
so has part: feature:980716-980887:-1:exon
so has part: feature:980544-980635:-1:exon
so has part: feature:980096-980192:-1:exon
so has part: feature:979843-979907:-1:exon
so has part: feature:979621-979743:-1:exon
so has part: feature:979350-979509:-1:exon
so has part: feature:979009-979115:-1:exon
so has part: feature:978689-978784:-1:exon
so has part: feature:978331-978516:-1:exon
so has part: feature:978141-978251:-1:exon
so has part: feature:977653-977769:-1:exon

XP_039414530.1
type: Protein
SIO_000068: ncbiprotein

position:977653:-1
position: 977653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982351:-1
position: 982351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982193-982351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:981729-981920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981571-981655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:981381-981470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:981016-981224:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980716-980887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980544-980635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:980096-980192:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:979843-979907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:979621-979743:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979350-979509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979009-979115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978689-978784:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:978331-978516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:978141-978251:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:977653-977769:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 982524..984161
location: region:982524-984161:1
so has part: feature:982524-984161:1:exon
subclass of: SO_0000010

104691945
type: Gene
SIO_000068: ncbigene

position:982524:1
position: 982524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984161:1
position: 984161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982524-984161:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: CHTF8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_039558573.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(982524..982554,983068..983099,983173..983290,983365..984161)
location: region:982524-984161:1
so has part: feature:982524-982554:1:exon
so has part: feature:983068-983099:1:exon
so has part: feature:983173-983290:1:exon
so has part: feature:983365-984161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982524-982554:1:exon

position:982554:1
position: 982554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983068-983099:1:exon

position:983068:1
position: 983068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983099:1
position: 983099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983173-983290:1:exon

position:983173:1
position: 983173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983290:1
position: 983290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983365-984161:1:exon

position:983365:1
position: 983365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQIVISSGGAGALAQWVLVELQGEVVPRQSGSLAGSLLGDLHYTSEGIPVLIVGHHILYGKVVQLEKPFAVLVKQGGAPQPSPAGPHGRYTVTALIKTKLLFKTRPKPIITHVPKKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(983077..983099,983173..983290,983365..983580)
location: region:983077-983580:1
so has part: feature:983077-983099:1:exon
so has part: feature:983173-983290:1:exon
so has part: feature:983365-983580:1:exon

XP_039414507.1
type: Protein
SIO_000068: ncbiprotein

position:983077:1
position: 983077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983580:1
position: 983580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983077-983099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983173-983290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983365-983580:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(984032..988209)
location: region:984032-988209:-1
so has part: feature:984032-988209:-1:exon
subclass of: SO_0000010

120410617
type: Gene
SIO_000068: ncbigene

position:984032:-1
position: 984032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988209:-1
position: 988209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984032-988209:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_039558572.1
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(984032..986024,986130..986231,986761..987381,988175..988209))
location: region:984032-988209:-1
so has part: feature:988175-988209:-1:exon
so has part: feature:986761-987381:-1:exon
so has part: feature:986130-986231:-1:exon
so has part: feature:984032-986024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988175-988209:-1:exon

position:988175:-1
position: 988175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986761-987381:-1:exon

position:986761:-1
position: 986761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987381:-1
position: 987381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986130-986231:-1:exon

position:986130:-1
position: 986130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986231:-1
position: 986231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:984032-986024:-1:exon

position:986024:-1
position: 986024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPGSLSTALRVVGTSLFAVAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGQPVRPGRSVALCIAAFQEDPDYLTKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHDVMGSEHSGSYIWRSNFHAQGEGETEAGLREGLARVQALVRSNTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPHVGGVGGDVQILNKYDSWLSFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRVWNILLFLLTVQLVGVIKATYACFLRGNAEMIFMSLYALLYMSSLLPAKIFAIATINKSGWGTSGRRTIVVNFVGLLPVSVWVAVLLGGLAYTAYSQDLFSETEVAFLISGAILYACYWVALLTLYLAIVARRCGKRQEQCGLVFTEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(985101..986024,986130..986231,986761..987381))
location: region:985101-987381:-1
so has part: feature:986761-987381:-1:exon
so has part: feature:986130-986231:-1:exon
so has part: feature:985101-986024:-1:exon

XP_039414506.1
type: Protein
SIO_000068: ncbiprotein

position:985101:-1
position: 985101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986761-987381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986130-986231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985101-986024:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990393..1009900)
location: region:990393-1009900:-1
so has part: feature:990393-1009900:-1:exon
subclass of: SO_0000010

104691943
type: Gene
SIO_000068: ncbigene

position:990393:-1
position: 990393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009900:-1
position: 1009900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990393-1009900:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TANGO6
product: transport and golgi organization 6 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_039558367.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(990393..990729,991267..991380,992290..992441,994329..994481,995915..995972,996168..996655,997937..998071,1000592..1000771,1001314..1001440,1002855..1003031,1004309..1004421,1005933..1006015,1006523..1006685,1007136..1007260,1007985..1008111,1008850..1008966,1009206..1009900))
location: region:990393-1009900:-1
so has part: feature:1009206-1009900:-1:exon
so has part: feature:1008850-1008966:-1:exon
so has part: feature:1007985-1008111:-1:exon
so has part: feature:1007136-1007260:-1:exon
so has part: feature:1006523-1006685:-1:exon
so has part: feature:1005933-1006015:-1:exon
so has part: feature:1004309-1004421:-1:exon
so has part: feature:1002855-1003031:-1:exon
so has part: feature:1001314-1001440:-1:exon
so has part: feature:1000592-1000771:-1:exon
so has part: feature:997937-998071:-1:exon
so has part: feature:996168-996655:-1:exon
so has part: feature:995915-995972:-1:exon
so has part: feature:994329-994481:-1:exon
so has part: feature:992290-992441:-1:exon
so has part: feature:991267-991380:-1:exon
so has part: feature:990393-990729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009206-1009900:-1:exon

position:1009206:-1
position: 1009206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008850-1008966:-1:exon

position:1008850:-1
position: 1008850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008966:-1
position: 1008966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007985-1008111:-1:exon

position:1007985:-1
position: 1007985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008111:-1
position: 1008111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007136-1007260:-1:exon

position:1007136:-1
position: 1007136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007260:-1
position: 1007260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006523-1006685:-1:exon

position:1006523:-1
position: 1006523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006685:-1
position: 1006685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1005933-1006015:-1:exon

position:1005933:-1
position: 1005933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006015:-1
position: 1006015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004309-1004421:-1:exon

position:1004309:-1
position: 1004309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004421:-1
position: 1004421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1002855-1003031:-1:exon

position:1002855:-1
position: 1002855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003031:-1
position: 1003031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1001314-1001440:-1:exon

position:1001314:-1
position: 1001314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001440:-1
position: 1001440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1000592-1000771:-1:exon

position:1000592:-1
position: 1000592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000771:-1
position: 1000771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:997937-998071:-1:exon

position:997937:-1
position: 997937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998071:-1
position: 998071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:996168-996655:-1:exon

position:996168:-1
position: 996168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996655:-1
position: 996655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:995915-995972:-1:exon

position:995915:-1
position: 995915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995972:-1
position: 995972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:994329-994481:-1:exon

position:994329:-1
position: 994329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994481:-1
position: 994481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:992290-992441:-1:exon

position:992290:-1
position: 992290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992441:-1
position: 992441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:991267-991380:-1:exon

position:991267:-1
position: 991267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991380:-1
position: 991380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:990393-990729:-1:exon

position:990729:-1
position: 990729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TANGO6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transport and Golgi organization protein 6 homolog
translation: MAGEAPAEPEPGRVVEALELLLGPPSHGDSATKSVPEPALCPETLRRNAAALEERLSRAAGWAALLELRAAVLSRAPALAAGVAGTEPGWAAACGLLALLLCLKERLAALAATPAAPAAPGAPPPPGADTLSVGQERALRRALRAAVGLGLLPHLPPGLGPGLGPGPGLGPPPGTRGARLLAAVAALVELARLPALGAPLLARHLRLLVAGLCVLGHGPATLCQGVSEAERARCREALRDILDRVYQPLAVQELLVLQGQPKQRSPSAGAAPAWLRRLCGHLLSERLLRPGGVQAVVRGVLEGTDGGAGTEAAALDWRKCDAVGKILAACPQQCLSLEDYYRQVCPQVLDLLHIQDKVAARQFQRVATTTLLTMAREQPQLAERHLLQPLLAPLRRCSEAAELALEDLAAGAVLVPEAELGSCVEDVLKVYVVGNDSSSLLLGSLQSVLGVVFSLYSFAKQNVSYLRSPCQDILLWFLEKAGWEQSLAVLEGLAGLSSHVPTLHPRCQLRVGSEGGATIVMEETISDEDEALYQKISSEQCHVESLVELLSHCQKSGLAGDFFIHCLKELTQVAAEDEAAPNPAVEPGGSLLELEQYQARQGRKLLVLQLVAALCEGISDTVFTDIVQVQEFVAAVLHRACAHPAQGPGAAAEAQTLAMAMGLVAALLGGAVQLQSSDFVVLKRLVPLLEELSRTYPEPLTQELASDLRIAICTHGACSPSAVGTAADDVLGRKPGMEHRALLPFPAEPPAXPSPRHGHGSPSAHRERSGEQSTRHEPSASPAPCADGPAPAGLQELLVSAYDPQPPSRAAALRHLASLVTQRDPEALRLQEKLLQVFLENVQHEDAFVYLSAIQGIALLSSEYPERILPVLLAQYECPAQGTENAAAAVTRMKLGEVLMRVTRALGDMVFQHREPLIRAFLRGARDPDSALRASSLSNLGELCQHLGFQLGSIIQEVTCCVTSIARTDPEAEVRRAAVHVVVLLLRGLSEKVTEVLRDVLRDLYRLLKHVATAERDGATVLHAQLALEELDTAMRRVLFPPQTLEKKIVVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(990553..990729,991267..991380,992290..992441,994329..994481,995915..995972,996168..996655,997937..998071,1000592..1000771,1001314..1001440,1002855..1003031,1004309..1004421,1005933..1006015,1006523..1006685,1007136..1007260,1007985..1008111,1008850..1008966,1009206..1009877))
location: region:990553-1009877:-1
so has part: feature:1009206-1009877:-1:exon
so has part: feature:1008850-1008966:-1:exon
so has part: feature:1007985-1008111:-1:exon
so has part: feature:1007136-1007260:-1:exon
so has part: feature:1006523-1006685:-1:exon
so has part: feature:1005933-1006015:-1:exon
so has part: feature:1004309-1004421:-1:exon
so has part: feature:1002855-1003031:-1:exon
so has part: feature:1001314-1001440:-1:exon
so has part: feature:1000592-1000771:-1:exon
so has part: feature:997937-998071:-1:exon
so has part: feature:996168-996655:-1:exon
so has part: feature:995915-995972:-1:exon
so has part: feature:994329-994481:-1:exon
so has part: feature:992290-992441:-1:exon
so has part: feature:991267-991380:-1:exon
so has part: feature:990553-990729:-1:exon

XP_039414301.1
type: Protein
SIO_000068: ncbiprotein

position:990553:-1
position: 990553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009877:-1
position: 1009877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009206-1009877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008850-1008966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007985-1008111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007136-1007260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006523-1006685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005933-1006015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004309-1004421:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1002855-1003031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001314-1001440:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000592-1000771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:997937-998071:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:996168-996655:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:995915-995972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:994329-994481:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:992290-992441:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:991267-991380:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:990553-990729:-1:exon

LOC104691942
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1011074..1019040)
location: region:1011074-1019040:-1
so has part: feature:1011074-1019040:-1:exon
subclass of: SO_0000010

104691942
type: Gene
SIO_000068: ncbigene

position:1011074:-1
position: 1011074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019040:-1
position: 1019040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011074-1019040:-1:exon

LOC104691942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691942
product: cadherin-1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_039558368.1
SIO_010081: LOC104691942
subclass of: SO_0000673
so part of: LOC104691942
location: complement(join(1011074..1011367,1011458..1011601,1011696..1011826,1011913..1012134,1012625..1012852,1012950..1013092,1013198..1013442,1013522..1013707,1013811..1013939,1014325..1014497,1014612..1014756,1014832..1014987,1015080..1015211,1015312..1015541,1018691..1018805,1018897..1019040))
location: region:1011074-1019040:-1
so has part: feature:1018897-1019040:-1:exon
so has part: feature:1018691-1018805:-1:exon
so has part: feature:1015312-1015541:-1:exon
so has part: feature:1015080-1015211:-1:exon
so has part: feature:1014832-1014987:-1:exon
so has part: feature:1014612-1014756:-1:exon
so has part: feature:1014325-1014497:-1:exon
so has part: feature:1013811-1013939:-1:exon
so has part: feature:1013522-1013707:-1:exon
so has part: feature:1013198-1013442:-1:exon
so has part: feature:1012950-1013092:-1:exon
so has part: feature:1012625-1012852:-1:exon
so has part: feature:1011913-1012134:-1:exon
so has part: feature:1011696-1011826:-1:exon
so has part: feature:1011458-1011601:-1:exon
so has part: feature:1011074-1011367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018897-1019040:-1:exon

position:1018897:-1
position: 1018897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018691-1018805:-1:exon

position:1018691:-1
position: 1018691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018805:-1
position: 1018805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1015312-1015541:-1:exon

position:1015312:-1
position: 1015312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015541:-1
position: 1015541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015080-1015211:-1:exon

position:1015080:-1
position: 1015080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015211:-1
position: 1015211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014832-1014987:-1:exon

position:1014832:-1
position: 1014832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014987:-1
position: 1014987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014612-1014756:-1:exon

position:1014612:-1
position: 1014612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014756:-1
position: 1014756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1014325-1014497:-1:exon

position:1014325:-1
position: 1014325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014497:-1
position: 1014497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1013811-1013939:-1:exon

position:1013811:-1
position: 1013811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013939:-1
position: 1013939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1013522-1013707:-1:exon

position:1013522:-1
position: 1013522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013707:-1
position: 1013707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1013198-1013442:-1:exon

position:1013198:-1
position: 1013198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013442:-1
position: 1013442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1012950-1013092:-1:exon

position:1012950:-1
position: 1012950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013092:-1
position: 1013092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1012625-1012852:-1:exon

position:1012625:-1
position: 1012625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012852:-1
position: 1012852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1011913-1012134:-1:exon

position:1011913:-1
position: 1011913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012134:-1
position: 1012134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1011696-1011826:-1:exon

position:1011696:-1
position: 1011696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011826:-1
position: 1011826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1011458-1011601:-1:exon

position:1011458:-1
position: 1011458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011601:-1
position: 1011601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1011074-1011367:-1:exon

position:1011367:-1
position: 1011367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691942
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-1
translation: MGRRAGCLVPLCLLLFLLQSGQRLCQRAASCQPGFTAETFALTVPRDSVAAGRALGRVSFVDCGESHHAAFLSDDTRFKVSRDGVVSATRPLQLQRGEITFAVHTWDAVGKKHSAKVILRRRWHQHRHHERMQQDTVPDMLIFPEHGHGLRRQKRDWVIPPINCPENERGPFPKKLVQIKSNKDKEMKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREQKDKYLLYSHAVSANGQPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDGINVNNGIIGYSILSEEPKGPQQMFTINAEKGIISIIGTGLDRETTPNYTLIIQAADQEGTGLTNTATAIIEVTDVNDNPPVFNPAMYEESVNENEVGVLVARLHVTDQDLPGSPAWHAVYRIQSGDPQGDFEITTDPKTNDGLLKTAKGLDYETQNRYKLVVSVENEVPFTVALNPATASVLVLVKDVNEAPIFIPPVKQVEVMEDVPVGYQVTSYTAQDPDKDQSQKITYRMGSDPAGWLAIDPENGIVTAAQPLDREAAHVINSTYKAIVLAVDNGSPHDATGTGTLLLLLQDVNDNGPVPEPRSFDICNQQPEEQTLNIVDKDLPPNTFPFRAELMHGSGSNWTARVTPPDLVKLSMKKELEPGEYSIFLKLLDGQGKEQITPVRAQVCSCEGPAKNCERRAFISGGMGVPAILGILGGILALLILLLLLLLFARRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPPPANPDEIGNFIDENLKAADTDPTXPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDMDYDYLNDWGGRFRKLAELYGGG
SIO_010081: LOC104691942
subclass of: SO_0000673
so part of: LOC104691942
location: complement(join(1011166..1011367,1011458..1011601,1011696..1011826,1011913..1012134,1012625..1012852,1012950..1013092,1013198..1013442,1013522..1013707,1013811..1013939,1014325..1014497,1014612..1014756,1014832..1014987,1015080..1015211,1015312..1015541,1018691..1018805,1018897..1018953))
location: region:1011166-1018953:-1
so has part: feature:1018897-1018953:-1:exon
so has part: feature:1018691-1018805:-1:exon
so has part: feature:1015312-1015541:-1:exon
so has part: feature:1015080-1015211:-1:exon
so has part: feature:1014832-1014987:-1:exon
so has part: feature:1014612-1014756:-1:exon
so has part: feature:1014325-1014497:-1:exon
so has part: feature:1013811-1013939:-1:exon
so has part: feature:1013522-1013707:-1:exon
so has part: feature:1013198-1013442:-1:exon
so has part: feature:1012950-1013092:-1:exon
so has part: feature:1012625-1012852:-1:exon
so has part: feature:1011913-1012134:-1:exon
so has part: feature:1011696-1011826:-1:exon
so has part: feature:1011458-1011601:-1:exon
so has part: feature:1011166-1011367:-1:exon

XP_039414302.1
type: Protein
SIO_000068: ncbiprotein

position:1011166:-1
position: 1011166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018953:-1
position: 1018953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018897-1018953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018691-1018805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015312-1015541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015080-1015211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014832-1014987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014612-1014756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014325-1014497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013811-1013939:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013522-1013707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013198-1013442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012950-1013092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1012625-1012852:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011913-1012134:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1011696-1011826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1011458-1011601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1011166-1011367:-1:exon

LOC104691941
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1020088..1026028)
location: region:1020088-1026028:-1
so has part: feature:1020088-1026028:-1:exon
subclass of: SO_0000010

104691941
type: Gene
SIO_000068: ncbigene

position:1020088:-1
position: 1020088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026028:-1
position: 1026028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020088-1026028:-1:exon

LOC104691941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691941
product: B-cadherin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_039558392.1
SIO_010081: LOC104691941
subclass of: SO_0000673
so part of: LOC104691941
location: complement(join(1020088..1020515,1020588..1020730,1020807..1020937,1021034..1021252,1021357..1021581,1021897..1022039,1022124..1022368,1022458..1022643,1022723..1022851,1022933..1023108,1023214..1023358,1023435..1023590,1023713..1023823,1023897..1024093,1025850..1026028))
location: region:1020088-1026028:-1
so has part: feature:1025850-1026028:-1:exon
so has part: feature:1023897-1024093:-1:exon
so has part: feature:1023713-1023823:-1:exon
so has part: feature:1023435-1023590:-1:exon
so has part: feature:1023214-1023358:-1:exon
so has part: feature:1022933-1023108:-1:exon
so has part: feature:1022723-1022851:-1:exon
so has part: feature:1022458-1022643:-1:exon
so has part: feature:1022124-1022368:-1:exon
so has part: feature:1021897-1022039:-1:exon
so has part: feature:1021357-1021581:-1:exon
so has part: feature:1021034-1021252:-1:exon
so has part: feature:1020807-1020937:-1:exon
so has part: feature:1020588-1020730:-1:exon
so has part: feature:1020088-1020515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025850-1026028:-1:exon

position:1025850:-1
position: 1025850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023897-1024093:-1:exon

position:1023897:-1
position: 1023897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024093:-1
position: 1024093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023713-1023823:-1:exon

position:1023713:-1
position: 1023713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023823:-1
position: 1023823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1023435-1023590:-1:exon

position:1023435:-1
position: 1023435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023590:-1
position: 1023590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023214-1023358:-1:exon

position:1023214:-1
position: 1023214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023358:-1
position: 1023358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022933-1023108:-1:exon

position:1022933:-1
position: 1022933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023108:-1
position: 1023108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022723-1022851:-1:exon

position:1022723:-1
position: 1022723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022851:-1
position: 1022851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022458-1022643:-1:exon

position:1022458:-1
position: 1022458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022643:-1
position: 1022643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1022124-1022368:-1:exon

position:1022124:-1
position: 1022124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022368:-1
position: 1022368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1021897-1022039:-1:exon

position:1021897:-1
position: 1021897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022039:-1
position: 1022039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1021357-1021581:-1:exon

position:1021357:-1
position: 1021357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021581:-1
position: 1021581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1021034-1021252:-1:exon

position:1021034:-1
position: 1021034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021252:-1
position: 1021252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1020807-1020937:-1:exon

position:1020807:-1
position: 1020807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020937:-1
position: 1020937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1020588-1020730:-1:exon

position:1020588:-1
position: 1020588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020730:-1
position: 1020730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1020088-1020515:-1:exon

position:1020515:-1
position: 1020515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104691941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691941
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: B-cadherin
translation: MRGPRSGLCPLSIFILLLLSPLLPAAAPSAAPPCVLPGLRRGPLPALGSSGGCAGPYRTEEPDVGVRDDGGPVRLPGVSRALAIPPRGAGTSRDAAGQPDPAPIPTESRHSPQELPRTRAALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTIEKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLSMIASGLDRERVREYTLTVQAADLDGEGLTTTALAIIEIADVNDNAPEFDPKTYEAAVPENVAGREVARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAITTDPATNEGILRTAKGLDYEAKQQFVLHVAVANEVPFVVKLPMATATVTVTVEDVNEAPVFMPPVQLATVSEDVPPGQTLTACTAQDPDKAQGQRIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYMAVLLAVDDGSPPATGTGTLLLTLLDVNDNGPEAEPRDVTVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHGSGDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCACEGLAQGCPQRPQPVTALPFVLATLGALLALLLILLLLLLFVRRRKVTKEPLLLPEDDTRDNIFYYGEEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPTLXASPQYRPRPANPDDIGTFIEENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
SIO_010081: LOC104691941
subclass of: SO_0000673
so part of: LOC104691941
location: complement(join(1020303..1020515,1020588..1020730,1020807..1020937,1021034..1021252,1021357..1021581,1021897..1022039,1022124..1022368,1022458..1022643,1022723..1022851,1022933..1023108,1023214..1023358,1023435..1023590,1023713..1023823,1023897..1024093,1025850..1025991))
location: region:1020303-1025991:-1
so has part: feature:1025850-1025991:-1:exon
so has part: feature:1023897-1024093:-1:exon
so has part: feature:1023713-1023823:-1:exon
so has part: feature:1023435-1023590:-1:exon
so has part: feature:1023214-1023358:-1:exon
so has part: feature:1022933-1023108:-1:exon
so has part: feature:1022723-1022851:-1:exon
so has part: feature:1022458-1022643:-1:exon
so has part: feature:1022124-1022368:-1:exon
so has part: feature:1021897-1022039:-1:exon
so has part: feature:1021357-1021581:-1:exon
so has part: feature:1021034-1021252:-1:exon
so has part: feature:1020807-1020937:-1:exon
so has part: feature:1020588-1020730:-1:exon
so has part: feature:1020303-1020515:-1:exon

XP_039414326.1
type: Protein
SIO_000068: ncbiprotein

position:1020303:-1
position: 1020303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025991:-1
position: 1025991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025850-1025991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023897-1024093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023713-1023823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023435-1023590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023214-1023358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022933-1023108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022723-1022851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022458-1022643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022124-1022368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021897-1022039:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021357-1021581:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021034-1021252:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020807-1020937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1020588-1020730:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020303-1020515:-1:exon

LOC104691858
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: LOC104691858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026993..1030170
location: region:1026993-1030170:1
so has part: feature:1026993-1030170:1:exon
subclass of: SO_0000010

104691858
type: Gene
SIO_000068: ncbigene

position:1026993:1
position: 1026993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030170:1
position: 1030170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026993-1030170:1:exon

LOC104691858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691858
product: 5-hydroxyisourate hydrolase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_039558394.1
SIO_010081: LOC104691858
subclass of: SO_0000673
so part of: LOC104691858
location: join(1026993..1027239,1027347..1027466,1027559..1027714,1027784..1027928,1028004..1028179,1028248..1028337,1029417..1029559,1029745..1029880,1030012..1030170)
location: region:1026993-1030170:1
so has part: feature:1026993-1027239:1:exon
so has part: feature:1027347-1027466:1:exon
so has part: feature:1027559-1027714:1:exon
so has part: feature:1027784-1027928:1:exon
so has part: feature:1028004-1028179:1:exon
so has part: feature:1028248-1028337:1:exon
so has part: feature:1029417-1029559:1:exon
so has part: feature:1029745-1029880:1:exon
so has part: feature:1030012-1030170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026993-1027239:1:exon

position:1027239:1
position: 1027239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027347-1027466:1:exon

position:1027347:1
position: 1027347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027466:1
position: 1027466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027559-1027714:1:exon

position:1027559:1
position: 1027559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027714:1
position: 1027714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027784-1027928:1:exon

position:1027784:1
position: 1027784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027928:1
position: 1027928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028004-1028179:1:exon

position:1028004:1
position: 1028004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028179:1
position: 1028179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1028248-1028337:1:exon

position:1028248:1
position: 1028248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028337:1
position: 1028337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1029417-1029559:1:exon

position:1029417:1
position: 1029417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029559:1
position: 1029559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1029745-1029880:1:exon

position:1029745:1
position: 1029745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029880:1
position: 1029880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030012-1030170:1:exon

position:1030012:1
position: 1030012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104691858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1-like isoform X1
translation: MAPCTFTVLLLLLDMLIFPEHGHGLRRQKRDWVIPPINCPENERGPFPKKLVQIKSTKDKEMKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREQKDKYVLYSHAVSANGQPVEDPMEIIITVTDQNDNRPVFTQTVYHGSVLEGAEPGTSVLRVLATDADDAVNSNNGVVSYSILSQVPEQPQPGMFTIDSSSGLVSVAMLGLAAEAVPEYTLEIQAADLGGVGLQATTTARITVQADGMSEVGNGTLTTHVLNTATGLPAAGLVIRLAQLQEPGPQWMELAQRHTDADGRCQPLLAPGQAKAGTYKLHFETAEYWQGLGHTSFYPFVEVVFIITDPAQKLHVPLLISPYSYTTYRGS
SIO_010081: LOC104691858
subclass of: SO_0000673
so part of: LOC104691858
location: join(1027201..1027239,1027347..1027466,1027559..1027714,1027784..1027928,1028004..1028179,1028248..1028337,1029417..1029559,1029745..1029880,1030012..1030101)
location: region:1027201-1030101:1
so has part: feature:1027201-1027239:1:exon
so has part: feature:1027347-1027466:1:exon
so has part: feature:1027559-1027714:1:exon
so has part: feature:1027784-1027928:1:exon
so has part: feature:1028004-1028179:1:exon
so has part: feature:1028248-1028337:1:exon
so has part: feature:1029417-1029559:1:exon
so has part: feature:1029745-1029880:1:exon
so has part: feature:1030012-1030101:1:exon

XP_039414328.1
type: Protein
SIO_000068: ncbiprotein

position:1027201:1
position: 1027201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030101:1
position: 1030101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027201-1027239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027347-1027466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027559-1027714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027784-1027928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028004-1028179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028248-1028337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029417-1029559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029745-1029880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030012-1030101:1:exon

LOC104691858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: LOC104691858
product: 5-hydroxyisourate hydrolase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_019288251.2
SIO_010081: LOC104691858
subclass of: SO_0000673
so part of: LOC104691858
location: join(1028344..1028824,1029417..1029559,1029745..1029880,1030012..1030170)
location: region:1028344-1030170:1
so has part: feature:1028344-1028824:1:exon
so has part: feature:1029417-1029559:1:exon
so has part: feature:1029745-1029880:1:exon
so has part: feature:1030012-1030170:1:exon

position:1028344:1
position: 1028344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028344-1028824:1:exon

position:1028824:1
position: 1028824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029417-1029559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029745-1029880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030012-1030170:1:exon

LOC104691858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: LOC104691858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxyisourate hydrolase-like isoform X2
translation: MAFCAVSPATGPWPSGTKASQADGMSEVGNGTLTTHVLNTATGLPAAGLVIRLAQLQEPGPQWMELAQRHTDADGRCQPLLAPGQAKAGTYKLHFETAEYWQGLGHTSFYPFVEVVFIITDPAQKLHVPLLISPYSYTTYRGS
SIO_010081: LOC104691858
subclass of: SO_0000673
so part of: LOC104691858
location: join(1028762..1028824,1029417..1029559,1029745..1029880,1030012..1030101)
location: region:1028762-1030101:1
so has part: feature:1028762-1028824:1:exon
so has part: feature:1029417-1029559:1:exon
so has part: feature:1029745-1029880:1:exon
so has part: feature:1030012-1030101:1:exon

XP_019143796.1
type: Protein
SIO_000068: ncbiprotein

position:1028762:1
position: 1028762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028762-1028824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029417-1029559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029745-1029880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030012-1030101:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1030151..1037040)
location: region:1030151-1037040:-1
so has part: feature:1030151-1037040:-1:exon
subclass of: SO_0000010

104691857
type: Gene
SIO_000068: ncbigene

position:1030151:-1
position: 1030151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037040:-1
position: 1037040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030151-1037040:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: GAS8
product: growth arrest specific 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_039558393.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1030151..1030545,1030789..1030854,1031929..1032138,1033104..1033190,1033487..1033654,1033858..1034063,1034494..1034548,1034853..1035059,1035226..1035423,1036405..1036491,1036940..1037040))
location: region:1030151-1037040:-1
so has part: feature:1036940-1037040:-1:exon
so has part: feature:1036405-1036491:-1:exon
so has part: feature:1035226-1035423:-1:exon
so has part: feature:1034853-1035059:-1:exon
so has part: feature:1034494-1034548:-1:exon
so has part: feature:1033858-1034063:-1:exon
so has part: feature:1033487-1033654:-1:exon
so has part: feature:1033104-1033190:-1:exon
so has part: feature:1031929-1032138:-1:exon
so has part: feature:1030789-1030854:-1:exon
so has part: feature:1030151-1030545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036940-1037040:-1:exon

position:1036940:-1
position: 1036940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036405-1036491:-1:exon

position:1036405:-1
position: 1036405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036491:-1
position: 1036491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1035226-1035423:-1:exon

position:1035226:-1
position: 1035226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035423:-1
position: 1035423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1034853-1035059:-1:exon

position:1034853:-1
position: 1034853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035059:-1
position: 1035059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1034494-1034548:-1:exon

position:1034494:-1
position: 1034494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034548:-1
position: 1034548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033858-1034063:-1:exon

position:1033858:-1
position: 1033858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034063:-1
position: 1034063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033487-1033654:-1:exon

position:1033487:-1
position: 1033487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033654:-1
position: 1033654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1033104-1033190:-1:exon

position:1033104:-1
position: 1033104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033190:-1
position: 1033190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1031929-1032138:-1:exon

position:1031929:-1
position: 1031929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032138:-1
position: 1032138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1030789-1030854:-1:exon

position:1030789:-1
position: 1030789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030854:-1
position: 1030854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1030151-1030545:-1:exon

position:1030545:-1
position: 1030545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4
translation: MAPKKKAKGKGGKGPAVVDASAPENMSREQLLEHTVRLREELDRERQERNSFQLECNRIQSYWEITRRELEEKKAELQNRDREMEEAEERHQVEIKVYKQKVKHLLHEQQENLTELKAEGVLSLRRAQKDHWDQEQELWKEKRSLNIKLKEQELANEAAITNLCLKHEEEMARLRSDFEMQTKEMEAKYTRKMQALRDEMDLRRKTELHELEERKNTQISELMGNHEGAFGAIKNYYNDITAKNLTLINLLKEQVEDLKKKETVLEKEKAEVLLQNKELTGPLQETQELVAELQKKLVHYYRDKEALMNSKAHLKITQKELKDLQWEHEVLEQRFSKVQAERDELYQKFTRAINEVQQKTGFKNLLLERKLHGLLSLLEQKEVELSEVFAASNLSPSALSLVSHKLEDVLNSKNATIQDLQLQLARVCKAHNDMLQTFEAKLTALGIPLDNLGFQPLSFPVPGQELGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1030396..1030545,1030789..1030854,1031929..1032138,1033104..1033190,1033487..1033654,1033858..1034063,1034494..1034548,1034853..1035059,1035226..1035423,1036405..1036491,1036940..1036942))
location: region:1030396-1036942:-1
so has part: feature:1036940-1036942:-1:exon
so has part: feature:1036405-1036491:-1:exon
so has part: feature:1035226-1035423:-1:exon
so has part: feature:1034853-1035059:-1:exon
so has part: feature:1034494-1034548:-1:exon
so has part: feature:1033858-1034063:-1:exon
so has part: feature:1033487-1033654:-1:exon
so has part: feature:1033104-1033190:-1:exon
so has part: feature:1031929-1032138:-1:exon
so has part: feature:1030789-1030854:-1:exon
so has part: feature:1030396-1030545:-1:exon

XP_039414327.1
type: Protein
SIO_000068: ncbiprotein

position:1030396:-1
position: 1030396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036942:-1
position: 1036942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036940-1036942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036405-1036491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1035226-1035423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034853-1035059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034494-1034548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033858-1034063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033487-1033654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033104-1033190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1031929-1032138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030789-1030854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030396-1030545:-1:exon

DBNDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1037236..1041042
location: region:1037236-1041042:1
so has part: feature:1037236-1041042:1:exon
subclass of: SO_0000010

120410587
type: Gene
SIO_000068: ncbigene

position:1037236:1
position: 1037236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041042:1
position: 1041042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037236-1041042:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_039558192.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1037236..1037662,1038646..1038769,1039714..1039878,1040286..1040426,1040513..1041042)
location: region:1037236-1041042:1
so has part: feature:1037236-1037662:1:exon
so has part: feature:1038646-1038769:1:exon
so has part: feature:1039714-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1041042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037236-1037662:1:exon

position:1037662:1
position: 1037662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1038646-1038769:1:exon

position:1038646:1
position: 1038646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038769:1
position: 1038769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1039714-1039878:1:exon

position:1039714:1
position: 1039714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039878:1
position: 1039878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1040286-1040426:1:exon

position:1040286:1
position: 1040286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040426:1
position: 1040426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040513-1041042:1:exon

position:1040513:1
position: 1040513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_039558191.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1037237..1037662,1038642..1038769,1039714..1039878,1040286..1040426,1040513..1041042)
location: region:1037237-1041042:1
so has part: feature:1037237-1037662:1:exon
so has part: feature:1038642-1038769:1:exon
so has part: feature:1039714-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1041042:1:exon

position:1037237:1
position: 1037237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037237-1037662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038642-1038769:1:exon

position:1038642:1
position: 1038642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1039714-1039878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040513-1041042:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_039558193.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1037238..1037662,1038642..1038769,1039732..1039878,1040286..1040426,1040513..1041042)
location: region:1037238-1041042:1
so has part: feature:1037238-1037662:1:exon
so has part: feature:1038642-1038769:1:exon
so has part: feature:1039732-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1041042:1:exon

position:1037238:1
position: 1037238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037238-1037662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038642-1038769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039732-1039878:1:exon

position:1039732:1
position: 1039732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040513-1041042:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X2
translation: MQAEARGEFCSRDQRPEGADVAELGKEPLVPEHPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENVAGETPGGLQPPAVPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPRDPRTPSCPPSARGSRRDKTRRGTPGYAGAGPVGTDGARPRAQDSR
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1038721..1038769,1039714..1039878,1040286..1040426,1040513..1040772)
location: region:1038721-1040772:1
so has part: feature:1038721-1038769:1:exon
so has part: feature:1039714-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1040772:1:exon

XP_039414125.1
type: Protein
SIO_000068: ncbiprotein

position:1038721:1
position: 1038721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040772:1
position: 1040772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038721-1038769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1039714-1039878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040513-1040772:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X2
translation: MQAEARGEFCSRDQRPEGADVAELGKEPLVPEHPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENVAGETPGGLQPPAVPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPRDPRTPSCPPSARGSRRDKTRRGTPGYAGAGPVGTDGARPRAQDSR
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1038721..1038769,1039714..1039878,1040286..1040426,1040513..1040772)
location: region:1038721-1040772:1
so has part: feature:1038721-1038769:1:exon
so has part: feature:1039714-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1040772:1:exon

XP_039414126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1038721-1038769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1039714-1039878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040513-1040772:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X3
translation: MQAEARGEFCSRDQRPELGKEPLVPEHPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENVAGETPGGLQPPAVPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPRDPRTPSCPPSARGSRRDKTRRGTPGYAGAGPVGTDGARPRAQDSR
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1038721..1038769,1039732..1039878,1040286..1040426,1040513..1040772)
location: region:1038721-1040772:1
so has part: feature:1038721-1038769:1:exon
so has part: feature:1039732-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1040772:1:exon

XP_039414127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1038721-1038769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1039732-1039878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040513-1040772:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_039558190.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1038776..1039878,1040286..1040426,1040513..1041042)
location: region:1038776-1041042:1
so has part: feature:1038776-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1041042:1:exon

position:1038776:1
position: 1038776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038776-1039878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040513-1041042:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X1
translation: MAKTICRGRLVPPALPGDGPSTIRPCPGPGTGCALSRRHKGAARGGGRGAGDGGCQLPTRGSRQFCPSPRSSQGSCCPRPLSRAPRECWGAPGGTALTDAEGADVAELGKEPLVPEHPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENVAGETPGGLQPPAVPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPRDPRTPSCPPSARGSRRDKTRRGTPGYAGAGPVGTDGARPRAQDSR
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1039413..1039878,1040286..1040426,1040513..1040772)
location: region:1039413-1040772:1
so has part: feature:1039413-1039878:1:exon
so has part: feature:1040286-1040426:1:exon
so has part: feature:1040513-1040772:1:exon

XP_039414124.1
type: Protein
SIO_000068: ncbiprotein

position:1039413:1
position: 1039413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039413-1039878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040286-1040426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040513-1040772:1:exon

DEF8
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1041391..1046334)
location: region:1041391-1046334:-1
so has part: feature:1041391-1046334:-1:exon
subclass of: SO_0000010

120410586
type: Gene
SIO_000068: ncbigene

position:1041391:-1
position: 1041391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046334:-1
position: 1046334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041391-1046334:-1:exon

DEF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: DEF8
product: differentially expressed in FDCP 8 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_039558189.1
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1041391..1042063,1042138..1042247,1042346..1042486,1042600..1042680,1043146..1043259,1043652..1043779,1044271..1044435,1044508..1044649,1044878..1045027,1045109..1045191,1045316..1045431,1046268..1046334))
location: region:1041391-1046334:-1
so has part: feature:1046268-1046334:-1:exon
so has part: feature:1045316-1045431:-1:exon
so has part: feature:1045109-1045191:-1:exon
so has part: feature:1044878-1045027:-1:exon
so has part: feature:1044508-1044649:-1:exon
so has part: feature:1044271-1044435:-1:exon
so has part: feature:1043652-1043779:-1:exon
so has part: feature:1043146-1043259:-1:exon
so has part: feature:1042600-1042680:-1:exon
so has part: feature:1042346-1042486:-1:exon
so has part: feature:1042138-1042247:-1:exon
so has part: feature:1041391-1042063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046268-1046334:-1:exon

position:1046268:-1
position: 1046268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045316-1045431:-1:exon

position:1045316:-1
position: 1045316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045431:-1
position: 1045431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045109-1045191:-1:exon

position:1045109:-1
position: 1045109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045191:-1
position: 1045191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1044878-1045027:-1:exon

position:1044878:-1
position: 1044878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045027:-1
position: 1045027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1044508-1044649:-1:exon

position:1044508:-1
position: 1044508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044649:-1
position: 1044649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1044271-1044435:-1:exon

position:1044271:-1
position: 1044271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044435:-1
position: 1044435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1043652-1043779:-1:exon

position:1043652:-1
position: 1043652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043779:-1
position: 1043779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1043146-1043259:-1:exon

position:1043146:-1
position: 1043146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043259:-1
position: 1043259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1042600-1042680:-1:exon

position:1042600:-1
position: 1042600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042680:-1
position: 1042680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1042346-1042486:-1:exon

position:1042346:-1
position: 1042346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042486:-1
position: 1042486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1042138-1042247:-1:exon

position:1042138:-1
position: 1042138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042247:-1
position: 1042247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1041391-1042063:-1:exon

position:1042063:-1
position: 1042063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: differentially expressed in FDCP 8 homolog
translation: MASDERLARFRQAHLNPFNKTPEQPERPDGEPPAPAQQPDPTPGDLEGALDLGLAEDHFSRPVGLILASDVPQLRQAIEECKRVILALPEHSERQKDAVVRLIHLRLKLQELKDPGEDEPNIRVVLEHRFYKEKSKSVKQMCDKCSTIIWGLIQTWYTCTGCYYRCHSKCLPLVSRPCVRAQVSHQAEYQLSICPESGLDSQDYRCAECRAPISLRGVPSEARQCDYTGLYYCSSCHWNDLAVVPARAIHNWDFEPRKVSRCSMRYLALMVSRPVLKLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSLQDLIDIEAGRLGCSLTEIHTLFAKHIKLDCERCQAKGFVCELCREGDVLFPFDSHTSVCADCSAVFHRDCYYDNSTTCPRCARLSLRKQSLFQDSSTEAEP
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1041961..1042063,1042138..1042247,1042346..1042486,1042600..1042680,1043146..1043259,1043652..1043779,1044271..1044435,1044508..1044649,1044878..1045027,1045109..1045191,1045316..1045421))
location: region:1041961-1045421:-1
so has part: feature:1045316-1045421:-1:exon
so has part: feature:1045109-1045191:-1:exon
so has part: feature:1044878-1045027:-1:exon
so has part: feature:1044508-1044649:-1:exon
so has part: feature:1044271-1044435:-1:exon
so has part: feature:1043652-1043779:-1:exon
so has part: feature:1043146-1043259:-1:exon
so has part: feature:1042600-1042680:-1:exon
so has part: feature:1042346-1042486:-1:exon
so has part: feature:1042138-1042247:-1:exon
so has part: feature:1041961-1042063:-1:exon

XP_039414123.1
type: Protein
SIO_000068: ncbiprotein

position:1041961:-1
position: 1041961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045421:-1
position: 1045421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045316-1045421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045109-1045191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044878-1045027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044508-1044649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044271-1044435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1043652-1043779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043146-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042600-1042680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042346-1042486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042138-1042247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041961-1042063:-1:exon

TUBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1047463..1052964)
location: region:1047463-1052964:-1
so has part: feature:1047463-1052964:-1:exon
subclass of: SO_0000010

104691940
type: Gene
SIO_000068: ncbigene

position:1047463:-1
position: 1047463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052964:-1
position: 1052964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047463-1052964:-1:exon

TUBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TUBB3
product: tubulin beta 3 class III
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 40 ESTs, 105 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039558581.1
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1047463..1048763,1049067..1049177,1049950..1050058,1050807..1050978,1051798..1052964))
location: region:1047463-1052964:-1
so has part: feature:1051798-1052964:-1:exon
so has part: feature:1050807-1050978:-1:exon
so has part: feature:1049950-1050058:-1:exon
so has part: feature:1049067-1049177:-1:exon
so has part: feature:1047463-1048763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051798-1052964:-1:exon

position:1051798:-1
position: 1051798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050807-1050978:-1:exon

position:1050807:-1
position: 1050807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050978:-1
position: 1050978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1049950-1050058:-1:exon

position:1049950:-1
position: 1049950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050058:-1
position: 1050058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049067-1049177:-1:exon

position:1049067:-1
position: 1049067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049177:-1
position: 1049177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1047463-1048763:-1:exon

position:1048763:-1
position: 1048763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-3 chain
translation: MSTLASLRLLRKPWNASKGNQSNATVGASSGWCQGLDIPNELFLVLGLVSLVENLLVVAAILKNRNLHSPTYYFICCLAVSDMLVSISNLAEMLLMLLLEHGVLVMHPSIIRHMDSVIDMLICSSVMSSLSFPGVIAVDRYITIFYALRYHSIMTLQRAVVTMVSIWLASTVSSTVLITYYSSNTILLCIIGFFLFMLVLMLVLYIHMFTLARHHLHSISSQQKPPTTHRGGSLKGAITLTILLGVFFICWGPFFFHLILIVTCPTNPFCICFFSYFNLFLILIICNSVIDPLIYAFRSQELRRTLREVVTCSWMRRRPHRPPRSRCRSAPVPLRSRPQPAPVPLRSGPAATMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGAK
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1047688..1048763,1049067..1049177,1049950..1050058,1050807..1050978,1051798..1052738))
location: region:1047688-1052738:-1
so has part: feature:1051798-1052738:-1:exon
so has part: feature:1050807-1050978:-1:exon
so has part: feature:1049950-1050058:-1:exon
so has part: feature:1049067-1049177:-1:exon
so has part: feature:1047688-1048763:-1:exon

XP_039414515.1
type: Protein
SIO_000068: ncbiprotein

position:1047688:-1
position: 1047688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052738:-1
position: 1052738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051798-1052738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1050807-1050978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049950-1050058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1049067-1049177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047688-1048763:-1:exon

TCF25
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1054560..1070961)
location: region:1054560-1070961:-1
so has part: feature:1054560-1070961:-1:exon
subclass of: SO_0000010

104691855
type: Gene
SIO_000068: ncbigene

position:1054560:-1
position: 1054560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070961:-1
position: 1070961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054560-1070961:-1:exon

TCF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: TCF25
product: transcription factor 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_039558195.1
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1054560..1054803,1054943..1055015,1055701..1055780,1056004..1056094,1056685..1056843,1057412..1057499,1058679..1058838,1059150..1059255,1059727..1059819,1060613..1060706,1061072..1061171,1063930..1064060,1064503..1064585,1065732..1065797,1066428..1066549,1068257..1068331,1069703..1069894,1070774..1070961))
location: region:1054560-1070961:-1
so has part: feature:1070774-1070961:-1:exon
so has part: feature:1069703-1069894:-1:exon
so has part: feature:1068257-1068331:-1:exon
so has part: feature:1066428-1066549:-1:exon
so has part: feature:1065732-1065797:-1:exon
so has part: feature:1064503-1064585:-1:exon
so has part: feature:1063930-1064060:-1:exon
so has part: feature:1061072-1061171:-1:exon
so has part: feature:1060613-1060706:-1:exon
so has part: feature:1059727-1059819:-1:exon
so has part: feature:1059150-1059255:-1:exon
so has part: feature:1058679-1058838:-1:exon
so has part: feature:1057412-1057499:-1:exon
so has part: feature:1056685-1056843:-1:exon
so has part: feature:1056004-1056094:-1:exon
so has part: feature:1055701-1055780:-1:exon
so has part: feature:1054943-1055015:-1:exon
so has part: feature:1054560-1054803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070774-1070961:-1:exon

position:1070774:-1
position: 1070774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069703-1069894:-1:exon

position:1069703:-1
position: 1069703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069894:-1
position: 1069894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1068257-1068331:-1:exon

position:1068257:-1
position: 1068257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068331:-1
position: 1068331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1066428-1066549:-1:exon

position:1066428:-1
position: 1066428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066549:-1
position: 1066549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1065732-1065797:-1:exon

position:1065732:-1
position: 1065732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065797:-1
position: 1065797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1064503-1064585:-1:exon

position:1064503:-1
position: 1064503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064585:-1
position: 1064585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1063930-1064060:-1:exon

position:1063930:-1
position: 1063930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064060:-1
position: 1064060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1061072-1061171:-1:exon

position:1061072:-1
position: 1061072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061171:-1
position: 1061171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1060613-1060706:-1:exon

position:1060613:-1
position: 1060613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060706:-1
position: 1060706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1059727-1059819:-1:exon

position:1059727:-1
position: 1059727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059819:-1
position: 1059819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1059150-1059255:-1:exon

position:1059150:-1
position: 1059150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059255:-1
position: 1059255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1058679-1058838:-1:exon

position:1058679:-1
position: 1058679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058838:-1
position: 1058838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1057412-1057499:-1:exon

position:1057412:-1
position: 1057412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057499:-1
position: 1057499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1056685-1056843:-1:exon

position:1056685:-1
position: 1056685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056843:-1
position: 1056843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1056004-1056094:-1:exon

position:1056004:-1
position: 1056004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056094:-1
position: 1056094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1055701-1055780:-1:exon

position:1055701:-1
position: 1055701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055780:-1
position: 1055780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1054943-1055015:-1:exon

position:1054943:-1
position: 1054943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055015:-1
position: 1055015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1054560-1054803:-1:exon

position:1054803:-1
position: 1054803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 25
translation: MSRRALRRLRGEQRGQEGPGLGQLGLDPGSEYAREGGPPPAPGKGPRGPPRAGVSNRFELIPAEESEDELLAGEERPDTRLSEGDTAGRSQEGSKDRSKEGAVIEETDGDGHREGQEAGQPDRTPASSNKPRKKKKKRKTKKNAAGETVEDNDLEDIDSLLERIEDPGLAPQSQGGIITDSRPLLYVEHRNLNPENELKRYFGARAVLGDQRPRQRQRQYVRSMWLTAPKNTWPRYSKTGITMQLLDTRRGVQHFTFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVFSLTSGACRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLLIDFLSLRAREYTFLTRLFQEWESHRNLSQLPNFAFSVPLAYFFLSQQEERPELERSQARERAARLIQLALIMFPSVLMPLLDHCSVQPDARVTSHPFFGLNAQISQSPALNQLTSLYVGRTHALWKDPAVMAWLEPHVHEVLRMVEAGDALVQEAEHKRKIRYQSAPRNIYRHIILSEMKEATAALPLEVTSQPVMGFDPLPPLDSIVSYTRPERTSHPSNESSLSLFFRSLLPNFNLQGDIRHNGDDEAAAVQDLNQGVNRLMAAMRDMLANIQFQEPPRDDNPEGDGDWD
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1054642..1054803,1054943..1055015,1055701..1055780,1056004..1056094,1056685..1056843,1057412..1057499,1058679..1058838,1059150..1059255,1059727..1059819,1060613..1060706,1061072..1061171,1063930..1064060,1064503..1064585,1065732..1065797,1066428..1066549,1068257..1068331,1069703..1069894,1070774..1070953))
location: region:1054642-1070953:-1
so has part: feature:1070774-1070953:-1:exon
so has part: feature:1069703-1069894:-1:exon
so has part: feature:1068257-1068331:-1:exon
so has part: feature:1066428-1066549:-1:exon
so has part: feature:1065732-1065797:-1:exon
so has part: feature:1064503-1064585:-1:exon
so has part: feature:1063930-1064060:-1:exon
so has part: feature:1061072-1061171:-1:exon
so has part: feature:1060613-1060706:-1:exon
so has part: feature:1059727-1059819:-1:exon
so has part: feature:1059150-1059255:-1:exon
so has part: feature:1058679-1058838:-1:exon
so has part: feature:1057412-1057499:-1:exon
so has part: feature:1056685-1056843:-1:exon
so has part: feature:1056004-1056094:-1:exon
so has part: feature:1055701-1055780:-1:exon
so has part: feature:1054943-1055015:-1:exon
so has part: feature:1054642-1054803:-1:exon

XP_039414129.1
type: Protein
SIO_000068: ncbiprotein

position:1054642:-1
position: 1054642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070953:-1
position: 1070953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070774-1070953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069703-1069894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068257-1068331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1066428-1066549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065732-1065797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064503-1064585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063930-1064060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061072-1061171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060613-1060706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1059727-1059819:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1059150-1059255:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058679-1058838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057412-1057499:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056685-1056843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1056004-1056094:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055701-1055780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1054943-1055015:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1054642-1054803:-1:exon

SPIRE2
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1071370..1078632)
location: region:1071370-1078632:-1
so has part: feature:1071370-1078632:-1:exon
subclass of: SO_0000010

104691939
type: Gene
SIO_000068: ncbigene

position:1071370:-1
position: 1071370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078632:-1
position: 1078632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071370-1078632:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039558547.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071370..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078632))
location: region:1071370-1078632:-1
so has part: feature:1078353-1078632:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071370-1072030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078632:-1:exon

position:1078353:-1
position: 1078353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

position:1075382:-1
position: 1075382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075419:-1
position: 1075419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

position:1074862:-1
position: 1074862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075221:-1
position: 1075221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

position:1074513:-1
position: 1074513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074593:-1
position: 1074593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

position:1074271:-1
position: 1074271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074435:-1
position: 1074435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

position:1074104:-1
position: 1074104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074190:-1
position: 1074190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

position:1073866:-1
position: 1073866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073974:-1
position: 1073974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073142-1073275:-1:exon

position:1073142:-1
position: 1073142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073275:-1
position: 1073275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1072769-1072903:-1:exon

position:1072769:-1
position: 1072769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072903:-1
position: 1072903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1072622-1072689:-1:exon

position:1072622:-1
position: 1072622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072689:-1
position: 1072689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1072486-1072513:-1:exon

position:1072486:-1
position: 1072486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072513:-1
position: 1072513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1072168-1072283:-1:exon

position:1072168:-1
position: 1072168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072283:-1
position: 1072283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1071370-1072030:-1:exon

position:1072030:-1
position: 1072030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_039558545.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071370..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078632))
location: region:1071370-1078632:-1
so has part: feature:1078353-1078632:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071370-1072030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

position:1073620:-1
position: 1073620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073789:-1
position: 1073789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

position:1073389:-1
position: 1073389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073539:-1
position: 1073539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071370-1072030:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039558546.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071370..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1077356..1077534))
location: region:1071370-1077534:-1
so has part: feature:1077356-1077534:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071370-1072030:-1:exon

position:1077534:-1
position: 1077534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077356-1077534:-1:exon

position:1077356:-1
position: 1077356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071370-1072030:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039558550.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071370..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1077299..1077401))
location: region:1071370-1077401:-1
so has part: feature:1077299-1077401:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071370-1072030:-1:exon

position:1077401:-1
position: 1077401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077299-1077401:-1:exon

position:1077299:-1
position: 1077299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071370-1072030:-1:exon

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X3
translation: MARAGAGPPRELSLEEVLKCYEQPLNEEQAWALCFQGCRAAAAAPVAPAPLRTADIRLRADGSVRLPAPPHDLPALLTPSAEAQMVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPASCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAVPLRRREPFQARSCATSAPTAPASSPTWSAPAAAAWPSSTPAPRPGATPRPAPSTATRGSSEGPGAPVMVATGVPVTPAQPPDVHIYIGWIHTASIFIYIMDQGAKGPVPAVPAIPFCPCHQPPRGWILSWGTHSPRWNGSCSSREDGCGCGQLLGDGSCCGTLRVPAFAPLLCQALAVPGCPVPWAGMAVLYVPSDNKPAGLPWGRVAGPEWMGERGEGCCGV
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071385..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078566))
location: region:1071385-1078566:-1
so has part: feature:1078353-1078566:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071385-1072030:-1:exon

XP_039414481.1
type: Protein
SIO_000068: ncbiprotein

position:1071385:-1
position: 1071385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078566:-1
position: 1078566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071385-1072030:-1:exon

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X1
translation: MARAGAGPPRELSLEEVLKCYEQPLNEEQAWALCFQGCRAAAAAPVAPAPLRTADIRLRADGSVRLPAPPHDLPALLTPSAEAQMVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGHLSSSSCLELSRCPASAAPVRPRPRVLLKAPTLAEMEEMNLSEEEDSPATEVPLKRDRSFSERDLAQLQSQLGGDQAAPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPASCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAVPLRRREPFQARSCATSAPTAPASSPTWSAPAAAAWPSSTPAPRPGATPRPAPSTATRGSSEGPGAPVMVATGVPVTPAQPPDVHIYIGWIHTASIFIYIMDQGAKGPVPAVPAIPFCPCHQPPRGWILSWGTHSPRWNGSCSSREDGCGCGQLLGDGSCCGTLRVPAFAPLLCQALAVPGCPVPWAGMAVLYVPSDNKPAGLPWGRVAGPEWMGERGEGCCGV
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071385..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078566))
location: region:1071385-1078566:-1
so has part: feature:1078353-1078566:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071385-1072030:-1:exon

XP_039414479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071385-1072030:-1:exon

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X2
translation: MVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGHLSSSSCLELSRCPASAAPVRPRPRVLLKAPTLAEMEEMNLSEEEDSPATEVPLKRDRSFSERDLAQLQSQLGGDQAAPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPASCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAVPLRRREPFQARSCATSAPTAPASSPTWSAPAAAAWPSSTPAPRPGATPRPAPSTATRGSSEGPGAPVMVATGVPVTPAQPPDVHIYIGWIHTASIFIYIMDQGAKGPVPAVPAIPFCPCHQPPRGWILSWGTHSPRWNGSCSSREDGCGCGQLLGDGSCCGTLRVPAFAPLLCQALAVPGCPVPWAGMAVLYVPSDNKPAGLPWGRVAGPEWMGERGEGCCGV
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071385..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221))
location: region:1071385-1075221:-1
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071385-1072030:-1:exon

XP_039414480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071385-1072030:-1:exon

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X2
translation: MVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGHLSSSSCLELSRCPASAAPVRPRPRVLLKAPTLAEMEEMNLSEEEDSPATEVPLKRDRSFSERDLAQLQSQLGGDQAAPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPASCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAVPLRRREPFQARSCATSAPTAPASSPTWSAPAAAAWPSSTPAPRPGATPRPAPSTATRGSSEGPGAPVMVATGVPVTPAQPPDVHIYIGWIHTASIFIYIMDQGAKGPVPAVPAIPFCPCHQPPRGWILSWGTHSPRWNGSCSSREDGCGCGQLLGDGSCCGTLRVPAFAPLLCQALAVPGCPVPWAGMAVLYVPSDNKPAGLPWGRVAGPEWMGERGEGCCGV
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071385..1072030,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221))
location: region:1071385-1075221:-1
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071385-1072030:-1:exon

XP_039414484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071385-1072030:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_039558549.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071783..1072091,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078632))
location: region:1071783-1078632:-1
so has part: feature:1078353-1078632:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071783-1072091:-1:exon

position:1071783:-1
position: 1071783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071783-1072091:-1:exon

position:1072091:-1
position: 1072091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X4
translation: MARAGAGPPRELSLEEVLKCYEQPLNEEQAWALCFQGCRAAAAAPVAPAPLRTADIRLRADGSVRLPAPPHDLPALLTPSAEAQMVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGHLSSSSCLELSRCPASAAPVRPRPRVLLKAPTLAEMEEMNLSEEEDSPATEVPLKRDRSFSERDLAQLQSQLGGDQAAPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPASCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAVPLRRREPFHSLSGPCWRRVEEEFPHIYAQGSVLRDVCSDCAGFVTDVVSSSRRSVAVLNASAASRRHAKARSLYSDAWLK
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1071875..1072091,1072168..1072283,1072486..1072513,1072622..1072689,1072769..1072903,1073142..1073275,1073389..1073539,1073620..1073789,1073866..1073974,1074104..1074190,1074271..1074435,1074513..1074593,1074862..1075221,1075382..1075419,1078353..1078566))
location: region:1071875-1078566:-1
so has part: feature:1078353-1078566:-1:exon
so has part: feature:1075382-1075419:-1:exon
so has part: feature:1074862-1075221:-1:exon
so has part: feature:1074513-1074593:-1:exon
so has part: feature:1074271-1074435:-1:exon
so has part: feature:1074104-1074190:-1:exon
so has part: feature:1073866-1073974:-1:exon
so has part: feature:1073620-1073789:-1:exon
so has part: feature:1073389-1073539:-1:exon
so has part: feature:1073142-1073275:-1:exon
so has part: feature:1072769-1072903:-1:exon
so has part: feature:1072622-1072689:-1:exon
so has part: feature:1072486-1072513:-1:exon
so has part: feature:1072168-1072283:-1:exon
so has part: feature:1071875-1072091:-1:exon

XP_039414483.1
type: Protein
SIO_000068: ncbiprotein

position:1071875:-1
position: 1071875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078353-1078566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075382-1075419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074862-1075221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074513-1074593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074271-1074435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074104-1074190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073866-1073974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073620-1073789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073389-1073539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073142-1073275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072769-1072903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072622-1072689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072486-1072513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072168-1072283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071875-1072091:-1:exon

FANCA
type: Gene
subclass of: SO_0000704
RO_0002162: 932674
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1082958..1115590
location: region:1082958-1115590:1
so has part: feature:1082958-1115590:1:exon
subclass of: SO_0000010

104691938
type: Gene
SIO_000068: ncbigene

position:1082958:1
position: 1082958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115590:1
position: 1115590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082958-1115590:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FANCA
product: FA complementation group A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039558411.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1082958..1083010,1083345..1083454,1084307..1084379,1084536..1084678,1084981..1085076,1086748..1086821,1087847..1087962,1088579..1088661,1089103..1089136,1091436..1091502,1092190..1092302,1092903..1092979,1093403..1093544,1094068..1094201,1095571..1095681,1096103..1096198,1096290..1096349,1097113..1097201,1097603..1097663,1097755..1097804,1098864..1098940,1100693..1100797,1101267..1101409,1101905..1101975,1103180..1103279,1104103..1104302,1104439..1104535,1104734..1104910,1105920..1105993,1106521..1106649,1107107..1107173,1107391..1107557,1107855..1107960,1108819..1108878,1109224..1109328,1109932..1110044,1110798..1110939,1112006..1112068,1113248..1113353,1113726..1113801,1114188..1114329,1114888..1114977,1115331..1115590)
location: region:1082958-1115590:1
so has part: feature:1082958-1083010:1:exon
so has part: feature:1083345-1083454:1:exon
so has part: feature:1084307-1084379:1:exon
so has part: feature:1084536-1084678:1:exon
so has part: feature:1084981-1085076:1:exon
so has part: feature:1086748-1086821:1:exon
so has part: feature:1087847-1087962:1:exon
so has part: feature:1088579-1088661:1:exon
so has part: feature:1089103-1089136:1:exon
so has part: feature:1091436-1091502:1:exon
so has part: feature:1092190-1092302:1:exon
so has part: feature:1092903-1092979:1:exon
so has part: feature:1093403-1093544:1:exon
so has part: feature:1094068-1094201:1:exon
so has part: feature:1095571-1095681:1:exon
so has part: feature:1096103-1096198:1:exon
so has part: feature:1096290-1096349:1:exon
so has part: feature:1097113-1097201:1:exon
so has part: feature:1097603-1097663:1:exon
so has part: feature:1097755-1097804:1:exon
so has part: feature:1098864-1098940:1:exon
so has part: feature:1100693-1100797:1:exon
so has part: feature:1101267-1101409:1:exon
so has part: feature:1101905-1101975:1:exon
so has part: feature:1103180-1103279:1:exon
so has part: feature:1104103-1104302:1:exon
so has part: feature:1104439-1104535:1:exon
so has part: feature:1104734-1104910:1:exon
so has part: feature:1105920-1105993:1:exon
so has part: feature:1106521-1106649:1:exon
so has part: feature:1107107-1107173:1:exon
so has part: feature:1107391-1107557:1:exon
so has part: feature:1107855-1107960:1:exon
so has part: feature:1108819-1108878:1:exon
so has part: feature:1109224-1109328:1:exon
so has part: feature:1109932-1110044:1:exon
so has part: feature:1110798-1110939:1:exon
so has part: feature:1112006-1112068:1:exon
so has part: feature:1113248-1113353:1:exon
so has part: feature:1113726-1113801:1:exon
so has part: feature:1114188-1114329:1:exon
so has part: feature:1114888-1114977:1:exon
so has part: feature:1115331-1115590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082958-1083010:1:exon

position:1083010:1
position: 1083010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1083345-1083454:1:exon

position:1083345:1
position: 1083345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083454:1
position: 1083454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084307-1084379:1:exon

position:1084307:1
position: 1084307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084379:1
position: 1084379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1084536-1084678:1:exon

position:1084536:1
position: 1084536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084678:1
position: 1084678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1084981-1085076:1:exon

position:1084981:1
position: 1084981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085076:1
position: 1085076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1086748-1086821:1:exon

position:1086748:1
position: 1086748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086821:1
position: 1086821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1087847-1087962:1:exon

position:1087847:1
position: 1087847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087962:1
position: 1087962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1088579-1088661:1:exon

position:1088579:1
position: 1088579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088661:1
position: 1088661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1089103-1089136:1:exon

position:1089103:1
position: 1089103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089136:1
position: 1089136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1091436-1091502:1:exon

position:1091436:1
position: 1091436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091502:1
position: 1091502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1092190-1092302:1:exon

position:1092190:1
position: 1092190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092302:1
position: 1092302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1092903-1092979:1:exon

position:1092903:1
position: 1092903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092979:1
position: 1092979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1093403-1093544:1:exon

position:1093403:1
position: 1093403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093544:1
position: 1093544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1094068-1094201:1:exon

position:1094068:1
position: 1094068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094201:1
position: 1094201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1095571-1095681:1:exon

position:1095571:1
position: 1095571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095681:1
position: 1095681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1096103-1096198:1:exon

position:1096103:1
position: 1096103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096198:1
position: 1096198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1096290-1096349:1:exon

position:1096290:1
position: 1096290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096349:1
position: 1096349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1097113-1097201:1:exon

position:1097113:1
position: 1097113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097201:1
position: 1097201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1097603-1097663:1:exon

position:1097603:1
position: 1097603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097663:1
position: 1097663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1097755-1097804:1:exon

position:1097755:1
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position:1097804:1
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urn:…
SIO_000300: 21
SIO_000628: feature:1098864-1098940:1:exon

position:1098864:1
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reference: sequence
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position:1098940:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1100693-1100797:1:exon

position:1100693:1
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reference: sequence
type: ForwardStrandPosition
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position:1100797:1
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urn:…
SIO_000300: 23
SIO_000628: feature:1101267-1101409:1:exon

position:1101267:1
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type: ForwardStrandPosition
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position:1101409:1
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urn:…
SIO_000300: 24
SIO_000628: feature:1101905-1101975:1:exon

position:1101905:1
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reference: sequence
type: ForwardStrandPosition
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position:1101975:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:1103180-1103279:1:exon

position:1103180:1
position: 1103180
reference: sequence
type: ForwardStrandPosition
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position:1103279:1
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urn:…
SIO_000300: 26
SIO_000628: feature:1104103-1104302:1:exon

position:1104103:1
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position:1104302:1
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urn:…
SIO_000300: 27
SIO_000628: feature:1104439-1104535:1:exon

position:1104439:1
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position:1104535:1
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urn:…
SIO_000300: 28
SIO_000628: feature:1104734-1104910:1:exon

position:1104734:1
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position:1104910:1
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urn:…
SIO_000300: 29
SIO_000628: feature:1105920-1105993:1:exon

position:1105920:1
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position:1105993:1
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urn:…
SIO_000300: 30
SIO_000628: feature:1106521-1106649:1:exon

position:1106521:1
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type: ForwardStrandPosition
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position:1106649:1
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urn:…
SIO_000300: 31
SIO_000628: feature:1107107-1107173:1:exon

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position:1107173:1
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urn:…
SIO_000300: 32
SIO_000628: feature:1107391-1107557:1:exon

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reference: sequence
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position:1107557:1
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urn:…
SIO_000300: 33
SIO_000628: feature:1107855-1107960:1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:1108819-1108878:1:exon

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position:1108878:1
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urn:…
SIO_000300: 35
SIO_000628: feature:1109224-1109328:1:exon

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position:1109328:1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:1109932-1110044:1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:1110798-1110939:1:exon

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reference: sequence
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position:1110939:1
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urn:…
SIO_000300: 38
SIO_000628: feature:1112006-1112068:1:exon

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position:1112068:1
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urn:…
SIO_000300: 39
SIO_000628: feature:1113248-1113353:1:exon

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reference: sequence
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position:1113353:1
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urn:…
SIO_000300: 40
SIO_000628: feature:1113726-1113801:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1113801:1
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reference: sequence
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urn:…
SIO_000300: 41
SIO_000628: feature:1114188-1114329:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:1114888-1114977:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1114977:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 43
SIO_000628: feature:1115331-1115590:1:exon

position:1115331:1
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reference: sequence
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FANCA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 932674
gene: FANCA
product: FA complementation group A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005602900.1
SIO_010081: FANCA
so part of: FANCA
location: join(1082958..1083010,1083345..1083454,1084307..1084379,1084536..1084678,1084981..1085076,1086748..1086821,1087847..1087962,1088579..1088661,1089103..1089136,1091436..1091502,1092190..1092302,1092903..1092979,1093403..1093544,1094068..1094201,1095571..1095681,1096103..1096198,1096290..1096349,1097113..1097201,1097603..1097663,1097755..1097804,1098864..1098940,1100693..1100797,1101267..1101409,1101905..1101975,1103180..1103279,1104103..1104302,1104439..1104535,1104734..1104910,1105920..1105993,1106521..1106649,1107107..1107173,1107391..1107557,1107855..1107960,1108819..1108878,1109224..1109328,1109932..1110044,1110798..1110939,1112006..1112068,1113248..1113353,1114188..1114329,1114888..1114977,1115331..1115422)
location: region:1082958-1115422:1
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so has part: feature:1098864-1098940:1:exon
so has part: feature:1100693-1100797:1:exon
so has part: feature:1101267-1101409:1:exon
so has part: feature:1101905-1101975:1:exon
so has part: feature:1103180-1103279:1:exon
so has part: feature:1104103-1104302:1:exon
so has part: feature:1104439-1104535:1:exon
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so has part: feature:1109224-1109328:1:exon
so has part: feature:1109932-1110044:1:exon
so has part: feature:1110798-1110939:1:exon
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so has part: feature:1113248-1113353:1:exon
so has part: feature:1114188-1114329:1:exon
so has part: feature:1114888-1114977:1:exon
so has part: feature:1115331-1115422:1:exon

position:1115422:1
position: 1115422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082958-1083010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083345-1083454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084307-1084379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084536-1084678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084981-1085076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086748-1086821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087847-1087962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088579-1088661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089103-1089136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091436-1091502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092190-1092302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092903-1092979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1093403-1093544:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094068-1094201:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1095571-1095681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1096103-1096198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096290-1096349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097113-1097201:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1097603-1097663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1097755-1097804:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1098864-1098940:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1100693-1100797:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1101267-1101409:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1101905-1101975:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1103180-1103279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1104103-1104302:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1104439-1104535:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1104734-1104910:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1105920-1105993:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106521-1106649:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1107107-1107173:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1107391-1107557:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1107855-1107960:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1108819-1108878:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1109224-1109328:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1109932-1110044:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1110798-1110939:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1112006-1112068:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1113248-1113353:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1114188-1114329:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1114888-1114977:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1115331-1115422:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 932674
gene: FANCA
product: FA complementation group A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_039558412.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1082961..1083010,1083348..1083454,1084307..1084379,1084536..1084678,1084981..1085076,1086748..1086821,1087847..1087962,1088579..1088661,1089103..1089136,1091436..1091502,1092190..1092302,1092903..1092979,1093403..1093544,1094068..1094201,1095571..1095681,1096103..1096198,1096290..1096349,1097113..1097201,1097603..1097663,1097755..1097804,1098864..1098940,1100693..1100797,1101267..1101409,1101905..1101975,1103180..1103279,1104103..1104302,1104439..1104535,1104734..1104910,1105920..1105993,1106521..1106649,1107107..1107173,1107391..1107557,1107855..1107960,1108819..1108878,1109224..1109328,1109932..1110044,1110798..1110939,1112006..1112068,1113248..1113353,1113726..1113801,1114188..1114329,1114888..1114977,1115331..1115590)
location: region:1082961-1115590:1
so has part: feature:1082961-1083010:1:exon
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so has part: feature:1114188-1114329:1:exon
so has part: feature:1114888-1114977:1:exon
so has part: feature:1115331-1115590:1:exon

position:1082961:1
position: 1082961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082961-1083010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083348-1083454:1:exon

position:1083348:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084307-1084379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084536-1084678:1:exon

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SIO_000628: feature:1092903-1092979:1:exon

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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1105920-1105993:1:exon

urn:…
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SIO_000628: feature:1106521-1106649:1:exon

urn:…
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SIO_000628: feature:1107107-1107173:1:exon

urn:…
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SIO_000628: feature:1107391-1107557:1:exon

urn:…
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SIO_000628: feature:1107855-1107960:1:exon

urn:…
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SIO_000628: feature:1108819-1108878:1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1110798-1110939:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1112006-1112068:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1113248-1113353:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1113726-1113801:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1114188-1114329:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1114888-1114977:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1115331-1115590:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X1
translation: MAGAGGRSWRDLLAGRARKRKSPFGSEAELQEAALRLLEHHQNLSDLLLEVGDSAKPDVQDGAEHRGVSPESFIVSVLQEQASKLGVPTATLAAQNAVANVERICQGSASPSRVPLLNSDQRKRLSCLLQTVKDLLANNMFCRSLFCQEMWKMKEPPVLEAVWHLHSSGIAGLAELLERSPAGPAAVEWLCSSLCGLCEQAGDMPCGDTQLAQRLLSDFAIVFLQNGFEQASELGRKVEFQKVAYICRAVLQRMLAWVLDAVGKEKQEDVSMVQAVSFWLNVFNVSLYGSVAHPDSLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESICQLQQVLETHEVNWQHVLSCVSTLVVCQAEAEQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGQHGSSKKALVFLFEFLSELVPFEAAPYLKVHIMYPPFVPTKHRSLLLEYITLAKTRLADLKVAIEDMGLYEDLSSTDEAVQPQTQALRDVEKALQIFENTRKIPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGLMAFIDSLKRADKIPSNLYSTYLQACHAMNEKVLQDDSKAEPSHSKEPFEQLKAELAELRSLVVEQAQWEEVPARIAVISERLRSVLGDSSEEDGAAPLDSPVQVAVPAPRLAPCHHSVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLVVKMMCGHRNLLPALLGRLCQLIYHQGPSLSAAHSLGLAAFVIHLSECRALIPGVEASFGVSQPVPGKALSVSEYWSSLLVCRTEESFAFCLRFCTAAAAYLMCKFSSCSYEDFCALIPPGLIKKLQYLVPRLSLEARGVLCEEAKAALSWSSLSCPSLNYRRASLCLWKQARFQELLEEKAFQLSFREWLLMELEVCPEKDILSASERQDFHYWAIYQRYLPAPSAAGGCDGDLEKACGVIINAILDSSQRLDLGGCGQSKISVSPEILCRLQELVLELRCRPKLLPGCSAAQKHFLFEILRGRLTASQHGSALGEQLWRQQELLLHRRILVGLPASTLITTCWKGNTTVLDCDDFFCFVNSELKNVCSRGYALSYDITAHFFRGLLNASLDCEDAAEGVNEALTKCQTKCPMVLLSAALWWPRLEPVLCSQWKRLFGAPLAEELDRLRSWHGSGTRFLCSGAVFPLCDPSWLSAAFLHSAILQQSPRGRGKEALERLGAEAEQLLVALLFFSLLDLISARIAPKEGVDFQMSLEWSLEILQCLEERGTSWLLLFHSAERGPGQCHVLRSAASDRHTRLLPLAFYSLTPCFHRELLQRDPTFLGVALQLYIQLLQLFVEGQVLPQSDQNPAEQDPLELISAARRFLLGAIPHCPARSFGNTQPLLSTCEELDPELGATLLHFSRPAVDMELEEELELF
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1082971..1083010,1083345..1083454,1084307..1084379,1084536..1084678,1084981..1085076,1086748..1086821,1087847..1087962,1088579..1088661,1089103..1089136,1091436..1091502,1092190..1092302,1092903..1092979,1093403..1093544,1094068..1094201,1095571..1095681,1096103..1096198,1096290..1096349,1097113..1097201,1097603..1097663,1097755..1097804,1098864..1098940,1100693..1100797,1101267..1101409,1101905..1101975,1103180..1103279,1104103..1104302,1104439..1104535,1104734..1104910,1105920..1105993,1106521..1106649,1107107..1107173,1107391..1107557,1107855..1107960,1108819..1108878,1109224..1109328,1109932..1110044,1110798..1110939,1112006..1112068,1113248..1113353,1113726..1113801,1114188..1114329,1114888..1114977,1115331..1115438)
location: region:1082971-1115438:1
so has part: feature:1082971-1083010:1:exon
so has part: feature:1083345-1083454:1:exon
so has part: feature:1084307-1084379:1:exon
so has part: feature:1084536-1084678:1:exon
so has part: feature:1084981-1085076:1:exon
so has part: feature:1086748-1086821:1:exon
so has part: feature:1087847-1087962:1:exon
so has part: feature:1088579-1088661:1:exon
so has part: feature:1089103-1089136:1:exon
so has part: feature:1091436-1091502:1:exon
so has part: feature:1092190-1092302:1:exon
so has part: feature:1092903-1092979:1:exon
so has part: feature:1093403-1093544:1:exon
so has part: feature:1094068-1094201:1:exon
so has part: feature:1095571-1095681:1:exon
so has part: feature:1096103-1096198:1:exon
so has part: feature:1096290-1096349:1:exon
so has part: feature:1097113-1097201:1:exon
so has part: feature:1097603-1097663:1:exon
so has part: feature:1097755-1097804:1:exon
so has part: feature:1098864-1098940:1:exon
so has part: feature:1100693-1100797:1:exon
so has part: feature:1101267-1101409:1:exon
so has part: feature:1101905-1101975:1:exon
so has part: feature:1103180-1103279:1:exon
so has part: feature:1104103-1104302:1:exon
so has part: feature:1104439-1104535:1:exon
so has part: feature:1104734-1104910:1:exon
so has part: feature:1105920-1105993:1:exon
so has part: feature:1106521-1106649:1:exon
so has part: feature:1107107-1107173:1:exon
so has part: feature:1107391-1107557:1:exon
so has part: feature:1107855-1107960:1:exon
so has part: feature:1108819-1108878:1:exon
so has part: feature:1109224-1109328:1:exon
so has part: feature:1109932-1110044:1:exon
so has part: feature:1110798-1110939:1:exon
so has part: feature:1112006-1112068:1:exon
so has part: feature:1113248-1113353:1:exon
so has part: feature:1113726-1113801:1:exon
so has part: feature:1114188-1114329:1:exon
so has part: feature:1114888-1114977:1:exon
so has part: feature:1115331-1115438:1:exon

XP_039414345.1
type: Protein
SIO_000068: ncbiprotein

position:1082971:1
position: 1082971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115438:1
position: 1115438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082971-1083010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083345-1083454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084307-1084379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084536-1084678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084981-1085076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086748-1086821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087847-1087962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088579-1088661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089103-1089136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091436-1091502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092190-1092302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092903-1092979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1093403-1093544:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094068-1094201:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1095571-1095681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1096103-1096198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096290-1096349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097113-1097201:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1097603-1097663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1097755-1097804:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1098864-1098940:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1100693-1100797:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1101267-1101409:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1101905-1101975:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1103180-1103279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1104103-1104302:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1104439-1104535:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1104734-1104910:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1105920-1105993:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1106521-1106649:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1107107-1107173:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1107391-1107557:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1107855-1107960:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1108819-1108878:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1109224-1109328:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1109932-1110044:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1110798-1110939:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1112006-1112068:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1113248-1113353:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1113726-1113801:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1114188-1114329:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1114888-1114977:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1115331-1115438:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 932674
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X2
translation: MAGAGGRSWRDLLGRARKRKSPFGSEAELQEAALRLLEHHQNLSDLLLEVGDSAKPDVQDGAEHRGVSPESFIVSVLQEQASKLGVPTATLAAQNAVANVERICQGSASPSRVPLLNSDQRKRLSCLLQTVKDLLANNMFCRSLFCQEMWKMKEPPVLEAVWHLHSSGIAGLAELLERSPAGPAAVEWLCSSLCGLCEQAGDMPCGDTQLAQRLLSDFAIVFLQNGFEQASELGRKVEFQKVAYICRAVLQRMLAWVLDAVGKEKQEDVSMVQAVSFWLNVFNVSLYGSVAHPDSLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESICQLQQVLETHEVNWQHVLSCVSTLVVCQAEAEQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGQHGSSKKALVFLFEFLSELVPFEAAPYLKVHIMYPPFVPTKHRSLLLEYITLAKTRLADLKVAIEDMGLYEDLSSTDEAVQPQTQALRDVEKALQIFENTRKIPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGLMAFIDSLKRADKIPSNLYSTYLQACHAMNEKVLQDDSKAEPSHSKEPFEQLKAELAELRSLVVEQAQWEEVPARIAVISERLRSVLGDSSEEDGAAPLDSPVQVAVPAPRLAPCHHSVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLVVKMMCGHRNLLPALLGRLCQLIYHQGPSLSAAHSLGLAAFVIHLSECRALIPGVEASFGVSQPVPGKALSVSEYWSSLLVCRTEESFAFCLRFCTAAAAYLMCKFSSCSYEDFCALIPPGLIKKLQYLVPRLSLEARGVLCEEAKAALSWSSLSCPSLNYRRASLCLWKQARFQELLEEKAFQLSFREWLLMELEVCPEKDILSASERQDFHYWAIYQRYLPAPSAAGGCDGDLEKACGVIINAILDSSQRLDLGGCGQSKISVSPEILCRLQELVLELRCRPKLLPGCSAAQKHFLFEILRGRLTASQHGSALGEQLWRQQELLLHRRILVGLPASTLITTCWKGNTTVLDCDDFFCFVNSELKNVCSRGYALSYDITAHFFRGLLNASLDCEDAAEGVNEALTKCQTKCPMVLLSAALWWPRLEPVLCSQWKRLFGAPLAEELDRLRSWHGSGTRFLCSGAVFPLCDPSWLSAAFLHSAILQQSPRGRGKEALERLGAEAEQLLVALLFFSLLDLISARIAPKEGVDFQMSLEWSLEILQCLEERGTSWLLLFHSAERGPGQCHVLRSAASDRHTRLLPLAFYSLTPCFHRELLQRDPTFLGVALQLYIQLLQLFVEGQVLPQSDQNPAEQDPLELISAARRFLLGAIPHCPARSFGNTQPLLSTCEELDPELGATLLHFSRPAVDMELEEELELF
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1082971..1083010,1083348..1083454,1084307..1084379,1084536..1084678,1084981..1085076,1086748..1086821,1087847..1087962,1088579..1088661,1089103..1089136,1091436..1091502,1092190..1092302,1092903..1092979,1093403..1093544,1094068..1094201,1095571..1095681,1096103..1096198,1096290..1096349,1097113..1097201,1097603..1097663,1097755..1097804,1098864..1098940,1100693..1100797,1101267..1101409,1101905..1101975,1103180..1103279,1104103..1104302,1104439..1104535,1104734..1104910,1105920..1105993,1106521..1106649,1107107..1107173,1107391..1107557,1107855..1107960,1108819..1108878,1109224..1109328,1109932..1110044,1110798..1110939,1112006..1112068,1113248..1113353,1113726..1113801,1114188..1114329,1114888..1114977,1115331..1115438)
location: region:1082971-1115438:1
so has part: feature:1082971-1083010:1:exon
so has part: feature:1083348-1083454:1:exon
so has part: feature:1084307-1084379:1:exon
so has part: feature:1084536-1084678:1:exon
so has part: feature:1084981-1085076:1:exon
so has part: feature:1086748-1086821:1:exon
so has part: feature:1087847-1087962:1:exon
so has part: feature:1088579-1088661:1:exon
so has part: feature:1089103-1089136:1:exon
so has part: feature:1091436-1091502:1:exon
so has part: feature:1092190-1092302:1:exon
so has part: feature:1092903-1092979:1:exon
so has part: feature:1093403-1093544:1:exon
so has part: feature:1094068-1094201:1:exon
so has part: feature:1095571-1095681:1:exon
so has part: feature:1096103-1096198:1:exon
so has part: feature:1096290-1096349:1:exon
so has part: feature:1097113-1097201:1:exon
so has part: feature:1097603-1097663:1:exon
so has part: feature:1097755-1097804:1:exon
so has part: feature:1098864-1098940:1:exon
so has part: feature:1100693-1100797:1:exon
so has part: feature:1101267-1101409:1:exon
so has part: feature:1101905-1101975:1:exon
so has part: feature:1103180-1103279:1:exon
so has part: feature:1104103-1104302:1:exon
so has part: feature:1104439-1104535:1:exon
so has part: feature:1104734-1104910:1:exon
so has part: feature:1105920-1105993:1:exon
so has part: feature:1106521-1106649:1:exon
so has part: feature:1107107-1107173:1:exon
so has part: feature:1107391-1107557:1:exon
so has part: feature:1107855-1107960:1:exon
so has part: feature:1108819-1108878:1:exon
so has part: feature:1109224-1109328:1:exon
so has part: feature:1109932-1110044:1:exon
so has part: feature:1110798-1110939:1:exon
so has part: feature:1112006-1112068:1:exon
so has part: feature:1113248-1113353:1:exon
so has part: feature:1113726-1113801:1:exon
so has part: feature:1114188-1114329:1:exon
so has part: feature:1114888-1114977:1:exon
so has part: feature:1115331-1115438:1:exon

XP_039414346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082971-1083010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083348-1083454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084307-1084379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084536-1084678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084981-1085076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086748-1086821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087847-1087962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088579-1088661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089103-1089136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091436-1091502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092190-1092302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092903-1092979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1093403-1093544:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094068-1094201:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1095571-1095681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1096103-1096198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1096290-1096349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1097113-1097201:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1097603-1097663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1097755-1097804:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1098864-1098940:1:exon