Corynebacterium deserti GIMN1.010 plasmid pCdes1, complete sequence.
type: Entry
definition: Corynebacterium deserti GIMN1.010 plasmid pCdes1, complete sequence.
sequence version: NZ_CP009221.1
sequence date: 2022-12-23
sequence: sequence
division: CON
label: NZ_CP009221.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02950576
keyword: RefSeq
source: Corynebacterium deserti GIMN1.010
organism: Corynebacterium deserti GIMN1.010
taxonomy: Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP009221.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.8\nGenome Coverage :: 89.9x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/23/2022 01:56:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,854\nCDSs (total) :: 2,774\nGenes (coding) :: 2,716\nCDSs (with protein) :: 2,716\nGenes (RNA) :: 80\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 3\nPseudo Genes (total) :: 58\nCDSs (without protein) :: 58\nPseudo Genes (ambiguous residues) :: 0 of 58\nPseudo Genes (frameshifted) :: 29 of 58\nPseudo Genes (incomplete) :: 39 of 58\nPseudo Genes (internal stop) :: 18 of 58\nPseudo Genes (multiple problems) :: 23 of 58\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 31005
topology: circular
so has quality: SO_0000988
location: 1..31005
location: region:1-31005:1
RO_0002162: 931089

NZ_CP009221
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02950576
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Corynebacterium deserti GIMN1.010 (=DSM 45689), isolated from desert sand in western China
author: Ruckert, C.
author: Albersmeier, A.
author: Kalinowski, J.
journal: Unpublished

2
title: Direct Submission
author: Ruckert, C.
author: Albersmeier, A.
author: Kalinowski, J.
journal: Submitted (11-AUG-2014) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld, NRW 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31005:1
position: 31005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31005:1:source
so part of: sequence
organism: Corynebacterium deserti GIMN1.010
mol type: genomic DNA
strain: GIMN1.010
isolation source: mixed sand sample
culture collection: DSM:45689
type material: type strain of Corynebacterium deserti
plasmid: pCdes1
country: China: western desert
collection date: 2011

931089
type: Taxonomy
SIO_000068: taxonomy

CDES_RS13635
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13635
old locus tag: CDES_14185
so part of: sequence
location: 250..1110
location: region:250-1110:1
so has part: feature:250-1110:1:exon
subclass of: SO_0000010

position:250:1
position: 250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110:1
position: 1110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250-1110:1:exon

CDES_RS13635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13635
old locus tag: CDES_14185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012359284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: abortive infection family protein
translation: MDLVSLNIRGAVLALSPYVTPVDAYMSWARHGFFHPEYNNPATIMQNPGFHHSLEIFSALSQNVKWNDQDQATRGLRALSQFARKADWGDYDDEREFNRILDDIRIACEEDGFEFTEDPRTITHGHAIALDELNLDGLSTTDGIYRKIKQINRALVRDKDNLEVIGFSKDLMEATASAVLQERGQSVESVRNMNAAERCSRAMAELGITSDNGSGKIAEGLTLTRKALNKIVEGASEMRRKDTDEGHGMAGVRVVSDSQAKLAISSALLWCHYILDKFYEESSAPF
SIO_010081: CDES_RS13635
subclass of: SO_0000673
so part of: CDES_RS13635
location: 250..1110
location: region:250-1110:1
so has part: feature:250-1110:1:exon

WP_053546251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250-1110:1:exon

CDES_RS13640
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13640
old locus tag: CDES_14190
so part of: sequence
location: 1217..1414
location: region:1217-1414:1
so has part: feature:1217-1414:1:exon
subclass of: SO_0000010

position:1217:1
position: 1217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414:1
position: 1414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217-1414:1:exon

CDES_RS13640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13640
old locus tag: CDES_14190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGFVAGRWPEDQVARISAEMMFQENQEAEGSLHGATGLFAEVRVDTVPAPAVSGMAPYRPLLPS
SIO_010081: CDES_RS13640
subclass of: SO_0000673
so part of: CDES_RS13640
location: 1217..1414
location: region:1217-1414:1
so has part: feature:1217-1414:1:exon

WP_053546252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217-1414:1:exon

CDES_RS13645
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13645
so part of: sequence
location: complement(1411..4773)
location: region:1411-4773:-1
so has part: feature:1411-4773:-1:exon
subclass of: SO_0000010

position:1411:-1
position: 1411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4773:-1
position: 4773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411-4773:-1:exon

CDES_RS13645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13645
inference: COORDINATES: protein motif:HMM:NF037202.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MFPAESPTIGFDKTVAKLVTDLAAIERELLLDARGNPEDQLKAPLTSFLSDAASALVSKIHVTTEHRQTVGDVVEGVRLDMAIKRGKGQLVGHIELKSPGKSANPYRKTGWTPHDRKQWSKLELHPNLIYSNGWEWTLLRHGAGQPLVHVTLEPRADGTVPGDQVDSLRQLLDQFLTWRPLAPSSPKALADQLAPLTAFLRDSVIDVLTHPSPTPTGLPALYQKWQADLMPGATPREFADSFAQTFTYALLLARIESSQDDETFTATSVTDSLLRNGHKLIGSVLELMAQPTNREAVEGAVGLLESTIGAVNPDKLTEKSDPWLYFYEDFLASYDPKMRKDAGVYYTPVEIVRLQVRLLDDILRSRFGRQRGLGTEDVNVLDPAAGTGAYPLAVAEHVLADSPAPQDDARSLAQRLFAFELLVGPYSVAHLRMTQMLEKTGISLGKEGVQVFLTNTLTDPGDISDDYQQISFWEIEQNLNEETRRAGLVKNQQTRIKVILGNPPYDRGSRGKALGTGSTRFPNIILEEVDGNPPLLEDFITPLKEIGAGGQAKNLYNSYIYFIRWAIWKACEQHKDEAGVVSFITSSSYLRGPGFAGLREYMRKAFDEIWIIDLGGEGRGARKDENVFNIQTPVAIFFGIQWEKNSKGQARKHSDRVRTRAKIRYIRVEGTKKEKLSSLKEISTPDSQNNPWVQLSNTDWHAKFVPDSAAGLAEFAPLDWVFPWVQSGAQYKRKWPIGVTPNALRKRWRELFSTGEVDPAAFVQDRDLLVSSEKTDVFSAEQLPPLTAPTASTSMVKPVRYGYRSFDRQWCLPDHRVGTYIRQQFWDCLSADQLYFATVTSTPLGGGPALTVSPYVPDLDYFRGSYGAKNIHPLYRSSDARPANISSCLLLVLTDTYGQEISPKDVALYTFGLLGTGAYTARFQDELEESAARVPFTTNYELFKETRDFGQSLIFEQTWGERGSELNQFGQPTRARFQGQAQIQLETPSTSYPERWIYDAESHQLTVGEAVFTQVLPEVMAFNVSGMNVVGSWLGYRMKEPAGKSSSPLDRIQAETWELDRELLELLWQVEFFVKAEPEGARLLEEVATGDLVPVKLLGPPETSETKAPKRKKINQEEIF
SIO_010081: CDES_RS13645
subclass of: SO_0000673
so part of: CDES_RS13645
location: complement(1411..4773)
location: region:1411-4773:-1
so has part: feature:1411-4773:-1:exon

WP_053546253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1411-4773:-1:exon

CDES_RS13650
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13650
old locus tag: CDES_14220
so part of: sequence
location: complement(4895..5554)
location: region:4895-5554:-1
so has part: feature:4895-5554:-1:exon
subclass of: SO_0000010

position:4895:-1
position: 4895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5554:-1
position: 5554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895-5554:-1:exon

CDES_RS13650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13650
old locus tag: CDES_14220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKQQEEYNRLAAESADHQAKSVELQRESVDRTNRPMVTVRYLPPKHVRDVLDLEISNVGKSVAYHVQVEFSPPLPAPDLDGLNENSKSGQTFYKPNVEIPRTLFVGRQFRTWVPGQKVTAPFWVSHKDYEVGDREAVSAEGIPAAQLVSISYQDEKGEGYTEEFELDLGIWVGTMFSDTDAFKQRKAVEKMSDSVQTLTRQIRTILNRTTPPPQNEIE
SIO_010081: CDES_RS13650
subclass of: SO_0000673
so part of: CDES_RS13650
location: complement(4895..5554)
location: region:4895-5554:-1
so has part: feature:4895-5554:-1:exon

WP_053546254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4895-5554:-1:exon

CDES_RS13655
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13655
pseudo: true
so part of: sequence
location: 5712..6424
location: region:5712-6424:1
so has part: feature:5712-6424:1:exon
subclass of: SO_0000010

position:5712:1
position: 5712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424:1
position: 6424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5712-6424:1:exon

CDES_RS13655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: CDES_RS13655
subclass of: SO_0000673
so part of: CDES_RS13655
location: 5712..6424
location: region:5712-6424:1
so has part: feature:5712-6424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5712-6424:1:exon

CDES_RS13660
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13660
pseudo: true
so part of: sequence
location: complement(<6617..7099)
location: region:6617-7099:-1
so has part: feature:6617-7099:-1:exon
subclass of: SO_0000010

position:6617:-1
position: 6617
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7099:-1
position: 7099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6617-7099:-1:exon

CDES_RS13660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015202.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380 family transposase
SIO_010081: CDES_RS13660
subclass of: SO_0000673
so part of: CDES_RS13660
location: complement(<6617..7099)
location: region:6617-7099:-1
so has part: feature:6617-7099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6617-7099:-1:exon

CDES_RS13665
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13665
old locus tag: CDES_14250
so part of: sequence
location: complement(7222..8100)
location: region:7222-8100:-1
so has part: feature:7222-8100:-1:exon
subclass of: SO_0000010

position:7222:-1
position: 7222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8100:-1
position: 8100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222-8100:-1:exon

CDES_RS13665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13665
old locus tag: CDES_14250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003806135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MEFMRLGSAGKEIPVVRHEGNYYHLGDIADDIDGPFLARDGISEVRQALSEGSLNKIDNADQLRIGPPISQPGALVCIGQNYAAHAAESGDLPPEEPIIFFKHPNTIIGPFDDVIIPPGAEKVDWEVELAIVMGSHASYLASHEEALECIAGFTISNDVSERDYQIAHSGGQWSKGKCCPTFNPLGPALVPLEDLADPQALRLSSQVNGEVRQDSTTADMIFSVAEIVRHLSHYMALEPGDIINTGTPEGVALSGRFPYLRNGDSMTMRIEGLGEQRQKLVDYSEAFALNAV
SIO_010081: CDES_RS13665
subclass of: SO_0000673
so part of: CDES_RS13665
location: complement(7222..8100)
location: region:7222-8100:-1
so has part: feature:7222-8100:-1:exon

WP_053546256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7222-8100:-1:exon

CDES_RS13670
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13670
old locus tag: CDES_14255
so part of: sequence
location: complement(8139..8891)
location: region:8139-8891:-1
so has part: feature:8139-8891:-1:exon
subclass of: SO_0000010

position:8139:-1
position: 8139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8891:-1
position: 8891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139-8891:-1:exon

CDES_RS13670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13670
old locus tag: CDES_14255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013599289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDKFENLRVIITGGASGIGFATARQLLARGAYVAILDLNIDSIPDGAVAHQCDVGNRESVEAAVESAARSLQAIDVVINSAGIGSIGSVEDHDDEDWFRVLNVNVTGIARVSTAALPYLRQSSSPAIVNVSSIAATHGLPQRALYSASKGAVAALTRAMAADYIHEGIRVNCVTPGTADTAWVRRLLESAKDPVDERKALEARQPHGRLVSPDEVAASIMFLVDPANGSTTGTSLAVDSGMHGLLVRPVA
SIO_010081: CDES_RS13670
subclass of: SO_0000673
so part of: CDES_RS13670
location: complement(8139..8891)
location: region:8139-8891:-1
so has part: feature:8139-8891:-1:exon

WP_053546257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8139-8891:-1:exon

CDES_RS13675
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13675
old locus tag: CDES_14260
so part of: sequence
location: complement(8914..9618)
location: region:8914-9618:-1
so has part: feature:8914-9618:-1:exon
subclass of: SO_0000010

position:8914:-1
position: 8914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9618:-1
position: 9618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9618:-1:exon

CDES_RS13675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13675
old locus tag: CDES_14260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013599288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MSEVVPPPNGEKKDIYSILRARILDLQLPPDSKVTIDAIAREMNVSHTPVREALRQLEGDNLIVKAPRRGYRTTSLLNFDQLRELFELRLLIEPWAARSAATNSLSNPSRALSSELEGFLRKRDAEDNIRHSLVTHDMQFHDHILQASRNTFVHQAIETTHSHLHLFRLYPGDWTGEQTVGEHRLIAEAIQACDPDAAEQAMRDHLMGAYYRFAGAFEKHEDVGPRPVPITQLY
SIO_010081: CDES_RS13675
subclass of: SO_0000673
so part of: CDES_RS13675
location: complement(8914..9618)
location: region:8914-9618:-1
so has part: feature:8914-9618:-1:exon

WP_053546258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9618:-1:exon

CDES_RS13680
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13680
old locus tag: CDES_14265
so part of: sequence
location: complement(9615..10829)
location: region:9615-10829:-1
so has part: feature:9615-10829:-1:exon
subclass of: SO_0000010

position:9615:-1
position: 9615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10829:-1
position: 10829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9615-10829:-1:exon

CDES_RS13680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13680
old locus tag: CDES_14265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009356628.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MNSDYSSQQHPAVADVLPDDYDHALLIGRIWDPNTEGPRPVVFDKGQLVDLFPYAHTVSELLNRDDPAALISQAISERKRVWDLADILQETGGDNEGSATLLAPLDLQVIKACGVTFVDSMIERVIEERCAGDFAQAQRIRSQVLEGIGGNLIHLRPGSEDAARVKEVLIQEGLWSQYLEVGIGPDPEVFTKAPVLSAVGYGAQVGIPGFSSWNNPEPELVLVVNAEGTVCGCTLGNDVNLRDVEGRSALLLGMAKDNNASAAIGPFIRLFDESYTLEDAREETIELIVEGEDGYTLRGVNSVSRLSRPFEELVSATHGYHHQYPDGFALFTGTLFAPTEDRDEPGMGFTHKEEDVVHIRSSRLGRLTNTVVPTNKLAPWSFGIMDLLRYVSVYGHHEEKAYHG
SIO_010081: CDES_RS13680
subclass of: SO_0000673
so part of: CDES_RS13680
location: complement(9615..10829)
location: region:9615-10829:-1
so has part: feature:9615-10829:-1:exon

WP_053546259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9615-10829:-1:exon

CDES_RS13685
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13685
old locus tag: CDES_14270
so part of: sequence
location: complement(10819..12318)
location: region:10819-12318:-1
so has part: feature:10819-12318:-1:exon
subclass of: SO_0000010

position:10819:-1
position: 10819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12318:-1
position: 12318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10819-12318:-1:exon

CDES_RS13685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13685
old locus tag: CDES_14270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013599286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase (NADP(+))
translation: MNTYLTPVTTPEMVDQAAHWAHEAHLISAQQTPEIRASWLVSVAQGLRDNSDELIALAMTDTNLSRKRLEGELTRSAFQLELLAEEIRSGVALDAVIDHADPHWGMGPRPDIRRVNVPLGVIGVFGASNFPFAFSVIGGDSASALAAGCAVLHKIHPGHLALARRTAEIVIDVLHGAGAPDGLFGVVEGREAAVALVQHPLVKAIGFTGSTAGGRALFDLACARPEPVPFFGELGSINPVFVLPGAWGRRQEEILAGYANSFTMGMGQFCTKPGLLFVPAGEKENGGYEKLVALLREVQLDKLLTPGLHESYLTTRDEVSKLAGIKVLVPGSDDEKPEPTVFTIDIHDVRYNPEVLHREMFGPATILVEYEDTAQLVELAGQLQGQLTVTLHADDDDDLTTLMEAITAKTGRVVFNEWPTGVTVSYAQHHGGPYPATTAPSATSVGTASIGRFMRPVAYQGLPDSALPPSIQESNPWGIARRVDGQFHPAAGDGATDEF
SIO_010081: CDES_RS13685
subclass of: SO_0000673
so part of: CDES_RS13685
location: complement(10819..12318)
location: region:10819-12318:-1
so has part: feature:10819-12318:-1:exon

WP_053546260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10819-12318:-1:exon

CDES_RS13690
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13690
old locus tag: CDES_14275
so part of: sequence
location: complement(12357..13643)
location: region:12357-13643:-1
so has part: feature:12357-13643:-1:exon
subclass of: SO_0000010

position:12357:-1
position: 12357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13643:-1
position: 13643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12357-13643:-1:exon

CDES_RS13690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13690
old locus tag: CDES_14275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019481810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fuconate dehydratase
translation: MSKIVSVNTTDVRFPTSLELDGSDAVNVDPDYSAAYVEISTDEGEKGYGLVFTCGRGNELVTAAMESYGDLLLGRETEELIYNLGDASRRLVHDSQLRWLGPEKGVSHMACGGLVNALWDIRARHEQKPLWLLLSEMSPEELVSTVDFTHIRNVLTPGDATAILERGQENKQERIAQLKESGFPAYTTTPGWLGYSDEKLVRLSKEAVQDGFGMIKLKVAGNLEDDKRRLALARSAVGPDIHIAIDANQRWEEQEAIDWVNQLQEYNPYWIEEPTSTDDILAHAAIRKGVHPVKVATGEAVHNRIIFKQLLQAGAIDVMQIDSTRVAGVNENIANLLLAAHFEVPVCPHAGGVGLCELVQHFSFFDYAVVSGSMENRMIEFVDHLHEHFVEPVEISNGRYQAPELPGIGAEMLQPAVERWAFAAGAGW
SIO_010081: CDES_RS13690
subclass of: SO_0000673
so part of: CDES_RS13690
location: complement(12357..13643)
location: region:12357-13643:-1
so has part: feature:12357-13643:-1:exon

WP_053546261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12357-13643:-1:exon

CDES_RS13695
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13695
old locus tag: CDES_14280
so part of: sequence
location: complement(13675..14955)
location: region:13675-14955:-1
so has part: feature:13675-14955:-1:exon
subclass of: SO_0000010

position:13675:-1
position: 13675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14955:-1
position: 14955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13675-14955:-1:exon

CDES_RS13695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13695
old locus tag: CDES_14280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013599284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease
translation: MILLLMIVGLLTLLALRVPVSFALLIPCLIYVLLDPNLSMGIAVQQTLSGVDSFALLAVPMFILLGNLANVSGVTDKLYDAAVAAIGHVKGSLGYVNVATSFGFSWMSGAAIADAAAMGRVQVPAMVQRGYKQEFSLGVTGASSLIAPMIPPSIPAIVYAVTAGVSVGALFMAGIVPALVLVAALCGMVWFLTRKQDHLREPRSSWGVRGRTALAALPAAGSAVVILGGILSGTFTPTEASGIGVIYILVLALAYKVLTWRKMYRTLLTTVETSGSVLLIVASAALFGWVLAREQAPQVAANLILEITNQPIVFLILVNLLLLIVGSVLEPTAAILILVPVLAPVAATFGIDPVHLGIMVIFNLVIGLITPPVGLVLFVLSSVTKAPVSTVIKGILPFFVPMVITLLVITFLPVVTLGLPTALGFL
SIO_010081: CDES_RS13695
subclass of: SO_0000673
so part of: CDES_RS13695
location: complement(13675..14955)
location: region:13675-14955:-1
so has part: feature:13675-14955:-1:exon

WP_053546262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13675-14955:-1:exon

CDES_RS13700
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13700
old locus tag: CDES_14285
so part of: sequence
location: complement(14965..15579)
location: region:14965-15579:-1
so has part: feature:14965-15579:-1:exon
subclass of: SO_0000010

position:14965:-1
position: 14965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15579:-1
position: 15579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14965-15579:-1:exon

CDES_RS13700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13700
old locus tag: CDES_14285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013599283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease
translation: MNEQTSTVVEPVNENNIAAGSIVPQEPDEPDFLEQKSTVYRFAVVTERLVCCAFLVIMLGLIVLQVVSRYVFNFPFTWTEELARYALIWFTFVAAGFVMARRIHISVDLVASKLSRKGAIALDTFALGLVVLASGLMASVGTGYAAGAARLAAPATSLPMSLVYAAAVVGLGLICIHAILHIFTNIRHPELVPDAMENLEREAV
SIO_010081: CDES_RS13700
subclass of: SO_0000673
so part of: CDES_RS13700
location: complement(14965..15579)
location: region:14965-15579:-1
so has part: feature:14965-15579:-1:exon

WP_053546263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14965-15579:-1:exon

CDES_RS13705
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13705
old locus tag: CDES_14290
so part of: sequence
location: complement(15576..16622)
location: region:15576-16622:-1
so has part: feature:15576-16622:-1:exon
subclass of: SO_0000010

position:15576:-1
position: 15576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16622:-1
position: 16622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15576-16622:-1:exon

CDES_RS13705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13705
old locus tag: CDES_14290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019481807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sialic acid TRAP transporter substrate-binding protein SiaP
translation: MTPRKESALSHGLKRKTLVTLGAVASLGFGLSACGVGEPVDPASVSEVDPNAKVLRLAHVYEASHPVEECGVATLKEELQGSGIKVDSFPSAQLGNEAESLEQVANGSVDIAIAGTSFLGVWHKPAEVLDAAYLIEDADHFVETVEGETMAGVFDDLYDSAGIKVLSSWYYGTRHVTANKEISEPEDLRGLKIRTPNAPLYLTNTKAMGGTATPMALDEVYLALQQGVIDAQENPVPTIATAKLDEVQEYINLTGHMVQGVHVTTGRGLYEGLSEEQKTSLESAVKAAAENTRQCVEEQEQTVLEEWKNSDGIKVNEEVNKEAFAGATEDVMLQQPWGDLYQQIKDRK
SIO_010081: CDES_RS13705
subclass of: SO_0000673
so part of: CDES_RS13705
location: complement(15576..16622)
location: region:15576-16622:-1
so has part: feature:15576-16622:-1:exon

WP_053546264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15576-16622:-1:exon

CDES_RS13710
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13710
old locus tag: CDES_14295
so part of: sequence
location: complement(16625..17698)
location: region:16625-17698:-1
so has part: feature:16625-17698:-1:exon
subclass of: SO_0000010

position:16625:-1
position: 16625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17698:-1
position: 17698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16625-17698:-1:exon

CDES_RS13710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13710
old locus tag: CDES_14295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009380412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ldh family oxidoreductase
translation: MSQMFNVAEITSLASRILKSCGVPDADAELVSYSLVQADQRGIYSHGLLRLPLYAEALRMGGINPVPSMDWREDSGSVAVLDADAALGQVAMQAAVDYVLERGAQSGIAAVAVTNSSHYGAGGFWSDQLSAAGFLSIVTSTTGPVVAPHGGLEKVLGTNPLTLGAPSSGDWPLTADLATSNGAYGKLIAARNEGKELPEGWAVDADGNPTTDPAAAAEGAMIPFGGHKGSAISALIEAFSASISDATYAFETIDIWSHPASRMNNGHLVIGLNTAAVSDRRRTEARVSTLQERIRGSGPNGRTVFSPGDPERIHEEQNADHVPLPSSTADQLVTLANQLGFEPIRPVSTHHLSSERT
SIO_010081: CDES_RS13710
subclass of: SO_0000673
so part of: CDES_RS13710
location: complement(16625..17698)
location: region:16625-17698:-1
so has part: feature:16625-17698:-1:exon

WP_053546265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16625-17698:-1:exon

CDES_RS13715
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13715
old locus tag: CDES_14300
so part of: sequence
location: 17899..18225
location: region:17899-18225:1
so has part: feature:17899-18225:1:exon
subclass of: SO_0000010

position:17899:1
position: 17899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18225:1
position: 18225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17899-18225:1:exon

CDES_RS13715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13715
old locus tag: CDES_14300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGQIISDDMIRVRIPTEEIRAYVAAFLLSENAHAQMMMNEYGSIQQHLEPSHVRNLLIPVPNDWSDAEKLIANGRGFIMAKEASDAAMERLRESGFDGGMREILGLV
SIO_010081: CDES_RS13715
subclass of: SO_0000673
so part of: CDES_RS13715
location: 17899..18225
location: region:17899-18225:1
so has part: feature:17899-18225:1:exon

WP_156323094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17899-18225:1:exon

CDES_RS14420
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS14420
pseudo: true
so part of: sequence
location: complement(18211..18784)
location: region:18211-18784:-1
so has part: feature:18211-18784:-1:exon
subclass of: SO_0000010

position:18211:-1
position: 18211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18784:-1
position: 18784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18211-18784:-1:exon

CDES_RS14420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS14420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005323728.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: CDES_RS14420
subclass of: SO_0000673
so part of: CDES_RS14420
location: complement(18211..18784)
location: region:18211-18784:-1
so has part: feature:18211-18784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18211-18784:-1:exon

CDES_RS13725
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13725
old locus tag: CDES_14315
so part of: sequence
location: complement(19084..19716)
location: region:19084-19716:-1
so has part: feature:19084-19716:-1:exon
subclass of: SO_0000010

position:19084:-1
position: 19084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19716:-1
position: 19716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19084-19716:-1:exon

CDES_RS13725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13725
old locus tag: CDES_14315
inference: COORDINATES: protein motif:HMM:NF020704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIISIANLKGGALRTTTAMFLAETFRRSGKPVMVADTTSRSDALKWATHADTQKRPIDFEVHTLRPDISIQDKGERAKVFHKSLKALEESLGKEGVVVMDTDSGDPHILRMLNGVIDVSVVPFELSPLSLNPTLETLDIINPARVMLVHHRYDEIDTEDEELLAKVAVNQGILCSKFFGYEPACPQMDFPSELPAFEQLIKDINTLTSDI
SIO_010081: CDES_RS13725
subclass of: SO_0000673
so part of: CDES_RS13725
location: complement(19084..19716)
location: region:19084-19716:-1
so has part: feature:19084-19716:-1:exon

WP_053546268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19084-19716:-1:exon

CDES_RS14425
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS14425
old locus tag: CDES_14320
so part of: sequence
location: 19789..20028
location: region:19789-20028:1
so has part: feature:19789-20028:1:exon
subclass of: SO_0000010

position:19789:1
position: 19789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20028:1
position: 20028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19789-20028:1:exon

CDES_RS14425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS14425
old locus tag: CDES_14320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006821242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MISDQELLRTFGKRVQKARRRKGISQEALAHESGLHRTYIGSVERGERNISLLNILTLSTVLEISPAVLVEGLKRMPQE
SIO_010081: CDES_RS14425
subclass of: SO_0000673
so part of: CDES_RS14425
location: 19789..20028
location: region:19789-20028:1
so has part: feature:19789-20028:1:exon

WP_082353538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19789-20028:1:exon

CDES_RS13730
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13730
old locus tag: CDES_14325
so part of: sequence
location: 20184..20762
location: region:20184-20762:1
so has part: feature:20184-20762:1:exon
subclass of: SO_0000010

position:20184:1
position: 20184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20762:1
position: 20762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20184-20762:1:exon

CDES_RS13730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13730
old locus tag: CDES_14325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIIGIINSKGGVGKTTTTINLATVFANQGKDVAVLDLDPQGSASDWADRAADAGTPLPFSVEATNIKRLPRVVGIHEFTIIDTPPGDPAIMDATIAVSDFVIVPVQSSPIELVRVGETLPSLTNTPHGVLITSARFGTRQLEETVEGLEEQGISTFDTKIPIREGIRSAFGTVPTKFEGYDFLAQEIMEAMS
SIO_010081: CDES_RS13730
subclass of: SO_0000673
so part of: CDES_RS13730
location: 20184..20762
location: region:20184-20762:1
so has part: feature:20184-20762:1:exon

WP_053546269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20184-20762:1:exon

CDES_RS13735
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13735
old locus tag: CDES_14330
so part of: sequence
location: 20822..20983
location: region:20822-20983:1
so has part: feature:20822-20983:1:exon
subclass of: SO_0000010

position:20822:1
position: 20822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20983:1
position: 20983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20822-20983:1:exon

CDES_RS13735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13735
old locus tag: CDES_14330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: toxin-antitoxin system HicB family antitoxin
translation: MKEAFVRGETKAFTLRMDSDLHYRLKLRALEEGRTMTDILDELARGYLDGKKS
SIO_010081: CDES_RS13735
subclass of: SO_0000673
so part of: CDES_RS13735
location: 20822..20983
location: region:20822-20983:1
so has part: feature:20822-20983:1:exon

WP_231686571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20822-20983:1:exon

CDES_RS13740
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13740
old locus tag: CDES_14335
so part of: sequence
location: 21326..22765
location: region:21326-22765:1
so has part: feature:21326-22765:1:exon
subclass of: SO_0000010

position:21326:1
position: 21326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22765:1
position: 22765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21326-22765:1:exon

CDES_RS13740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13740
old locus tag: CDES_14335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSLPNDYAAGTTRHAEVPSFTGDLDDTPAGYTDRDALLSHLGRQVLHGSRSRDFASAYITTKDGTRAPRMYRVDSETLGKCEYVQLTNKQYAAVLVVDIDLPGTAGGHPVNLNDEVKEKFSQLITHHLGPAWVGINPVNGKCQAIWLIDPIYADVSGQSPHMALLAAATHTLGQWLGHDSHFAHRFSRSPFYTGDSPTAYRWYRQNHAVRRVGDLLKDLRTMTGQEQYSKPRQQFSSGRELINAVKSRREEAQRFKALSEGVEAELAGELDQYDPELTQGVRVLWIRAGRAARDETAFRHALKTGYRLRQSGQRLTDAAIIDAYERAYGVAQEVGADGRKAELPPMRDRQTMARRVRGYVTTSKSEVHGGSSVSGQVTSAERKALATMGRRGGKKAAERWKNPDSDYAQEMREKLQLANRKRMIQGNSTRGRVLAIYSQTLFETGEGPSARQIATEIGCDRSTVAKHLSALRKSGLIST
SIO_010081: CDES_RS13740
subclass of: SO_0000673
so part of: CDES_RS13740
location: 21326..22765
location: region:21326-22765:1
so has part: feature:21326-22765:1:exon

WP_053546270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21326-22765:1:exon

CDES_RS14770
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS14770
so part of: sequence
location: 24568..24810
location: region:24568-24810:1
so has part: feature:24568-24810:1:exon
subclass of: SO_0000010

position:24568:1
position: 24568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24810:1
position: 24810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24568-24810:1:exon

CDES_RS14770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS14770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRPTASLHTCGVRFSKISLLRIMKSCPARSQNFLTTATHFLFWYFFKNPKKYYTPFADNLTFGFRWSETRDGEQLSNAK
SIO_010081: CDES_RS14770
subclass of: SO_0000673
so part of: CDES_RS14770
location: 24568..24810
location: region:24568-24810:1
so has part: feature:24568-24810:1:exon

WP_156323096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24568-24810:1:exon

CDES_RS13745
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13745
old locus tag: CDES_14350
so part of: sequence
location: 24830..28825
location: region:24830-28825:1
so has part: feature:24830-28825:1:exon
subclass of: SO_0000010

position:24830:1
position: 24830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28825:1
position: 28825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24830-28825:1:exon

CDES_RS13745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13745
old locus tag: CDES_14350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase domain-containing protein
translation: MMSIRVVNAGDGYAYLMDSVATHDEHTAGTALSDYYNATGTPPGRWFGRGIDGLGETTLTVGGIAEEAQMGALYGEGLHPDADSRLENGATLSEVQLGRQYPIYTKGVPVLTAVKEAEKKFFAAHGRRPDTEERNVIGLQVARPYYEEAAEVSASTPREVLAWLNDEKNKVRQATSGLDLTFSPQKSVSVLWALGDEQTRTAIEKIHTQCVEESLAWVEDNVLFTRTGSRGERQIKARGMIASTFMHYDTRAGDPDLHTHCLISNKVQAERGQQHLSDADADKWRSIDASVVLKNSARISQRYQQMLTHRLTTELGLDFRPRVTDADKQPVWEIAGISDEMIESFSSRRVMAKPVYEAYAAQYAATHGHAPSDRARYALWQQAILDTRDAKKPGQSLAAHREHWLALNGGQPLNVADLHADAKRELFPEPGTEDYALAVATLAVDAVDDTRSRRAEFYRRHLDTSISMRLSQWRFTSTEQAEQVRTAAESFAMEHLIATLSVNIAHTLPAALVADNGKTIDHDVDSEKLTAKQTLAEEATVLDSINIPTGFIASRTSVEAALAAHKDKTGFALNTGQQLLASHLTESGTLVAAGVGPAGTGKTASMSVVADVWRAHGHAVHALAPSSNAAQQLGDDIGAHGHTIASLTYRWRGLIGGRPHEVDGLGIDLAPGDMLLVDEAGMATTADLAALVEIAQATGAVVRMVGDPHQLDAVETGGLFRTIVKRDASVELDQVMRMGADKVQADAGLKIRHGDHTGLDLYYERGWVHHGDRSDMIANAARDHLADTSAGRSSILIASTRQDVHAANHIIRDARIEAGLVDTTGRSIELGTGHDVAVGDIILTRRNQTIGEHKILNGQRFHVHAVSDDGSLVVVDEQRQRTVVLPAEYVSEHVQLGYAATVHRAQGVTVDVTRAVIGAETDRRGLYVALTRGKKQNHLYVAEDTSIDVDAEGGHWHMSGEHHAPDHRAILEKIVATDSGQRSATDLHHDELLHAVSDERKAQLLSTATDLLTAQWRSEVLEPEVRERLDQLSVHYLESIDEDDAVEKISTALVRMTGAGTDYRDVMDRSFAGLEGSRDVGAVIASRLSQYLPESQAEVRALPPRHYGMDSELYDWAEATREALLARPTRELRELPTPLPDSGVVEGWDLHNVDLRGHDLSNLKFVDCDLQGAALDNTTWHYTNFTNCSMENMTATGAQIGVGDSVLRASVIMDSRLEGADFSEVRGESLSIMRSSAHNIVVDGAYLRGNFTNSDFTGVDFEAAEIGELTLAKSVTEDSAQVREREAAQQRELDEMINSMAQDEDETATASSGVDDMAGDYFGYEDTGFEL
SIO_010081: CDES_RS13745
subclass of: SO_0000673
so part of: CDES_RS13745
location: 24830..28825
location: region:24830-28825:1
so has part: feature:24830-28825:1:exon

WP_231686572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24830-28825:1:exon

CDES_RS14430
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS14430
old locus tag: CDES_14360
so part of: sequence
location: 29315..29560
location: region:29315-29560:1
so has part: feature:29315-29560:1:exon
subclass of: SO_0000010

position:29315:1
position: 29315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29560:1
position: 29560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29315-29560:1:exon

CDES_RS14430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS14430
old locus tag: CDES_14360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770473.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTPDKKILIQLGGRIRDVRKGLGISQEELAHLSGMHRTYVSSVERGERNISVLNLLSLAGVLGVDAGDLVTGLTRAPRIKP
SIO_010081: CDES_RS14430
subclass of: SO_0000673
so part of: CDES_RS14430
location: 29315..29560
location: region:29315-29560:1
so has part: feature:29315-29560:1:exon

WP_011091138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29315-29560:1:exon

CDES_RS13750
type: Gene
subclass of: SO_0000704
RO_0002162: 931089
locus tag: CDES_RS13750
old locus tag: CDES_14365
so part of: sequence
location: complement(29936..30967)
location: region:29936-30967:-1
so has part: feature:29936-30967:-1:exon
subclass of: SO_0000010

position:29936:-1
position: 29936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30967:-1
position: 30967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29936-30967:-1:exon

CDES_RS13750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 931089
locus tag: CDES_RS13750
old locus tag: CDES_14365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003854479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRYGTLLGLHGKPKDRVIIMRKGSKTTRVKFPHKDRPGFNLEEVKVDASTVLDDGGELWEKYQRTPKSATFVSFSGEPQGHLHVQRVYKNVIKASVYEGNGQWGRIDDFHPEQVLFDAGEAWPKSKTDQLLNDTDVVPAPEETLTPTPKTTDLGQRVGYVRVSSADQNLARQREAIGAVDREFVDELSARSRAQRPGLEECIAYLRNHDELVVASIDRLARSLVDLRTIIDQITAKGASVRFIKEGLVFSATDQDPRATLMLGILGSFAEFERSIIRERQAEGIALAKKAGKYSGRKKALSPAQIKQARDRIDVGESKTAVAQDLGVGRATLYRYLMTDNKR
SIO_010081: CDES_RS13750
subclass of: SO_0000673
so part of: CDES_RS13750
location: complement(29936..30967)
location: region:29936-30967:-1
so has part: feature:29936-30967:-1:exon

WP_053546271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29936-30967:-1:exon