Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed2, complete sequence.
type: Entry
definition: Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed2, complete sequence.
sequence version: NZ_CP019939.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP019939.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06191729
keyword: RefSeq
source: Ketogulonicigenium robustum
organism: Ketogulonicigenium robustum
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Ketogulonicigenium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP019939.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assmbler v. 2.5.3\nGenome Coverage :: 20.49\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 05:22:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,696\nCDSs (total) :: 2,613\nGenes (coding) :: 2,581\nCDSs (with protein) :: 2,581\nGenes (RNA) :: 83\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 62\nncRNAs :: 3\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 19 of 32\nPseudo Genes (incomplete) :: 17 of 32\nPseudo Genes (internal stop) :: 8 of 32\nPseudo Genes (multiple problems) :: 12 of 32\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 19694
topology: circular
so has quality: SO_0000988
location: 1..19694
location: region:1-19694:1
RO_0002162: 92947

NZ_CP019939
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06191729
type: BioSample
SIO_000068: biosample

1
title: Ketogulonicigenium robustum SPU B003 Genome sequencing and assembly
author: Li, Y.
author: Liu, L.
author: Wang, C.
author: Zhang, M.
author: Zhang, T.
author: Zhang, Y.
journal: Unpublished

2
title: Direct Submission
author: Li, Y.
author: Liu, L.
author: Wang, C.
author: Zhang, M.
author: Zhang, T.
author: Zhang, Y.
journal: Submitted (22-FEB-2017) Shenyang Pharmaceutical University, School of Life Science and Biological Pharmacy, Wenhua Road, 103th, Shenyang, Liaoning 110016, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19694:1
position: 19694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19694:1:source
so part of: sequence
organism: Ketogulonicigenium robustum
mol type: genomic DNA
strain: SPU_B003
isolation source: soil
plasmid: unnamed2
country: China: Yunnan
collection date: 2015-04-03

92947
type: Taxonomy
SIO_000068: taxonomy

BVG79_RS13215
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13215
old locus tag: BVG79_p2000001
so part of: sequence
location: 1..1029
location: region:1-1029:1
so has part: feature:1-1029:1:exon
subclass of: SO_0000010

position:1029:1
position: 1029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1029:1:exon

BVG79_RS13215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13215
old locus tag: BVG79_p2000001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911250.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTNLRSPLLPDRHPQKDLFVCDIVDAVPKGDMASMEHPMFTLSTKPDMKPRRYQNNDNWIEVSPSRYGLATVHDRDVLIYCISQCMAAINEGQKISRSMRFKAYDLLVATNRQTSGQGYQLLKDALRRLQGTQIETNIRQGGKEYFKVFGLIESAEIVRVTRDGRMLDVEITLSDWVFDAIENNHVLTLSRGYFLLRKPLERRLYEIGRKHCGAQSKWMCSLELLRNKCGSGSTKKEFRRLLSKIIEDDTAHDHFPDYSMSIEGENAVFRPKVVETIASTTFQALPFNDPDTRDTARELAPGWDVYSLEEEWRSWVHDKAINVKDADKHFLAFCKKRGAYPS
SIO_010081: BVG79_RS13215
subclass of: SO_0000673
so part of: BVG79_RS13215
location: 1..1029
location: region:1-1029:1
so has part: feature:1-1029:1:exon

WP_085787594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1029:1:exon

BVG79_RS13765
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13765
old locus tag: BVG79_p2000002
so part of: sequence
location: 1340..2137
location: region:1340-2137:1
so has part: feature:1340-2137:1:exon
subclass of: SO_0000010

position:1340:1
position: 1340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137:1
position: 2137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340-2137:1:exon

BVG79_RS13765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13765
old locus tag: BVG79_p2000002
inference: COORDINATES: protein motif:HMM:NF022337.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2726 domain-containing protein
translation: MTDINFTMIIGFLVVIALVGGVYWFVEGRKSLYSSKQLMNKSEFRLYNLLNRWRHENRPDLILSPQVPYGAFIQAQGNLWRGLVAKRADFVIWSKDGFVRAIIEYDGPGHHGKNSASARKVIERDKLKDKAALKANFALIRVYEDTSEADILADIINTAVADPIRYVYDFGDYWVHLIETESVDDPIPENLYPRLVDVVGRCPPEDVGGLPGYENFIEAIGDAAHPEHEELTQWVEGPFDPHIPDGDELRRNVLKLAKKWQPKKK
SIO_010081: BVG79_RS13765
subclass of: SO_0000673
so part of: BVG79_RS13765
location: 1340..2137
location: region:1340-2137:1
so has part: feature:1340-2137:1:exon

WP_085787595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1340-2137:1:exon

BVG79_RS13225
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13225
so part of: sequence
location: 2332..3009
location: region:2332-3009:1
so has part: feature:2332-3009:1:exon
subclass of: SO_0000010

position:2332:1
position: 2332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3009:1
position: 3009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2332-3009:1:exon

BVG79_RS13225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007427784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVISFANPKGGAGKTTSALILATQLSEGGASVTIIDADPERWISQWASLPGKPENISIVSGVTEDGIVDQIEAASGTSQFVIVDLEGTASLMVANAIGMSDLVLIPIQGSSMDARGGAKTIRLISNQAKMARRAIPHCVVLTRTSAAVRSRALKNVHEQLMSGGIDICETSIVERAAYRDLFDYGGTLSDLDPSQVSNVDKAIENARQFAGEVVGKLKRSQEDQ
SIO_010081: BVG79_RS13225
subclass of: SO_0000673
so part of: BVG79_RS13225
location: 2332..3009
location: region:2332-3009:1
so has part: feature:2332-3009:1:exon

WP_085787596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2332-3009:1:exon

BVG79_RS13230
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13230
so part of: sequence
location: 3009..3332
location: region:3009-3332:1
so has part: feature:3009-3332:1:exon
subclass of: SO_0000010

position:3332:1
position: 3332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3009-3332:1:exon

BVG79_RS13230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010687710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKQRANLGFGDALNDLSSFAPAPKIAPKDRSTEQAAEASGFVSREPKSPPVSKPQRRRRTGRNAQFNIKATPETIESFYRIADANGWGLGETLEHAVALLEQLKKP
SIO_010081: BVG79_RS13230
subclass of: SO_0000673
so part of: BVG79_RS13230
location: 3009..3332
location: region:3009-3332:1
so has part: feature:3009-3332:1:exon

WP_085787597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3009-3332:1:exon

BVG79_RS13235
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13235
so part of: sequence
location: 3370..3711
location: region:3370-3711:1
so has part: feature:3370-3711:1:exon
subclass of: SO_0000010

position:3370:1
position: 3370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3711:1
position: 3711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3370-3711:1:exon

BVG79_RS13235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017183789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTSLQTVVELPEFQRRSRSIMTDAERDAAIAWIAENPEAGIALGGGLRKVRIPRAGAGKSGGFRTIYVFGGRHMPIFLITVFAKNEKANLTPTEQAAAVEMSKEIIAIWSNKQ
SIO_010081: BVG79_RS13235
subclass of: SO_0000673
so part of: BVG79_RS13235
location: 3370..3711
location: region:3370-3711:1
so has part: feature:3370-3711:1:exon

WP_085787598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3370-3711:1:exon

BVG79_RS13240
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13240
so part of: sequence
location: 3708..3998
location: region:3708-3998:1
so has part: feature:3708-3998:1:exon
subclass of: SO_0000010

position:3708:1
position: 3708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998:1
position: 3998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3708-3998:1:exon

BVG79_RS13240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009505437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSAFDSIMQGLEEARAFSTGQKAGAAVHEISLPEIDVARIRAQTGLSQTEFARSIGVAKGTLLNWEQKRRMPQGPAQVLLALIERKPSLVQDLLSG
SIO_010081: BVG79_RS13240
subclass of: SO_0000673
so part of: BVG79_RS13240
location: 3708..3998
location: region:3708-3998:1
so has part: feature:3708-3998:1:exon

WP_085787599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3708-3998:1:exon

BVG79_RS13595
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13595
so part of: sequence
location: 4313..4594
location: region:4313-4594:1
so has part: feature:4313-4594:1:exon
subclass of: SO_0000010

position:4313:1
position: 4313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4594:1
position: 4594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4313-4594:1:exon

BVG79_RS13595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKMIGSFLNLNWWGTPDHTVQSFSTIPTSGAHTMDELSTLDISGGTFGGIHSINPASGLPTVAGDGTPDIAGNSWGTLDMDHSSGGGQWGQF
SIO_010081: BVG79_RS13595
subclass of: SO_0000673
so part of: BVG79_RS13595
location: 4313..4594
location: region:4313-4594:1
so has part: feature:4313-4594:1:exon

WP_157115759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4313-4594:1:exon

BVG79_RS13690
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13690
so part of: sequence
location: 4933..5094
location: region:4933-5094:1
so has part: feature:4933-5094:1:exon
subclass of: SO_0000010

position:4933:1
position: 4933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5094:1
position: 5094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4933-5094:1:exon

BVG79_RS13690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQERYYLTDDQAQELKCVLNAEKDHAPDLVAKVHELVFGTPIPDDPEPNFEPS
SIO_010081: BVG79_RS13690
subclass of: SO_0000673
so part of: BVG79_RS13690
location: 4933..5094
location: region:4933-5094:1
so has part: feature:4933-5094:1:exon

WP_198167942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4933-5094:1:exon

BVG79_RS13250
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13250
old locus tag: BVG79_p2000005
so part of: sequence
location: 5773..7101
location: region:5773-7101:1
so has part: feature:5773-7101:1:exon
subclass of: SO_0000010

position:5773:1
position: 5773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7101:1
position: 7101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5773-7101:1:exon

BVG79_RS13250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13250
old locus tag: BVG79_p2000005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiviral reverse transcriptase Drt2
translation: MPGFYLPSENEFDPSTDDFVLPAISKERKYKHFDLPLVDRELSFDFSVEDKPHRFLPLLGFTDVNRRYVRNKDGAREVKVKERPIRFASHEDAAYLQAYAGHLNRMYERALWRDGTSDSVLAYRRGGGTNIHHAKALFDEIKSRGDCTVFAMDISGFFDCLDHTLLRDEIADLIGETRLEGHHASVWKNVTRYSWVETEDLDKLLGRKRNGHGRICSPSDFSDHVRGRKDGLIRKHDQTFGIPQGTPVSGLYANIYLRTFDREMIAWCSRAGGSYRRYSDDIAVTLPLGAKVHHVVAVVEKMLADFCLSMSIDKTDTADFKDGLLASATPIQYLGFTFDGQKTKIRPSSLDAYRGKMRRGIHAKMIAAKAKNVPSFEVFKRESLARYTHLGKRRNFLRYAYKAADIMGCPEIKDQVSRHVTWFNRAWEREAIRVFGGLVTTT
SIO_010081: BVG79_RS13250
subclass of: SO_0000673
so part of: BVG79_RS13250
location: 5773..7101
location: region:5773-7101:1
so has part: feature:5773-7101:1:exon

WP_085787601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5773-7101:1:exon

BVG79_RS13255
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13255
so part of: sequence
location: complement(7112..7624)
location: region:7112-7624:-1
so has part: feature:7112-7624:-1:exon
subclass of: SO_0000010

position:7112:-1
position: 7112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7624:-1
position: 7624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112-7624:-1:exon

BVG79_RS13255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQEIAAAGFQPPAYRVVSETISGSVPAMRRPEFARLVDRLEPGDILVVSKLDRLGRDAIDVTETVAALSQIPVRVHCLALGGTDLTSSSGQLTMNVLSAVAQFERDLLRERTSAGLAAAKAKGKRLGRPKVLTEDNESEARAALARGETVSGIAKRFNVSRATIGRLRDS
SIO_010081: BVG79_RS13255
subclass of: SO_0000673
so part of: BVG79_RS13255
location: complement(7112..7624)
location: region:7112-7624:-1
so has part: feature:7112-7624:-1:exon

WP_236951487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7112-7624:-1:exon

BVG79_RS13260
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13260
so part of: sequence
location: 7892..8467
location: region:7892-8467:1
so has part: feature:7892-8467:1:exon
subclass of: SO_0000010

position:7892:1
position: 7892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8467:1
position: 8467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7892-8467:1:exon

BVG79_RS13260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006013223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVVRLNDPTFVDLKCISTWMGTETPSETIMLLVREKMAALDLERDIEISIDPTSEISSFMEFKSTPGLSFTKVLSAEVDHKKIDKPNWAAILLGAVSSLKAKGLSGDHLAEAIQIPTKTACYEEEGFRYYPDLGISIQGQSAQEAWKEVSRIADKHGIAVQVTFQWRDNEKAQYPGQKGVLRAGRSSRRP
SIO_010081: BVG79_RS13260
subclass of: SO_0000673
so part of: BVG79_RS13260
location: 7892..8467
location: region:7892-8467:1
so has part: feature:7892-8467:1:exon

WP_085787603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7892-8467:1:exon

BVG79_RS13265
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13265
old locus tag: BVG79_p2000008
so part of: sequence
location: 8524..11385
location: region:8524-11385:1
so has part: feature:8524-11385:1:exon
subclass of: SO_0000010

position:8524:1
position: 8524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11385:1
position: 11385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8524-11385:1:exon

BVG79_RS13265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13265
old locus tag: BVG79_p2000008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011662013.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SNF2-related protein
translation: MLFQFSEYQSKFFAHHLTSEGIQEEDALTQSLSAAKVDLNPHQVDAATFALRSPLSKGVLLADEVGLGKTIEAALVISQRWWERERNILLIVPASLRKQWATELREKFSLPSFILDAKRVKDLENEGTPHPVGRGEGIIIVSYEYAARIADTLRRTPWSLVVFDEAHKLRNVYKAAENSRASVLRKALAGRQKLLLTATPLQNNLMELYGLISIIDETYFGSEQAFRSEFGGREGLTSQALLAKRLEPICKRTLRRQVQRAGLINYTNRLPKTFDFTPGRLETDLYEKVSEYLQDPSTIALGQNGRHLVTLMLRKILGSSSFAVMQTLDKMIRRLEAKRVVGADTLDDLDGFSDEAEDWREADSGSEADAIEDDTEDAERVDPAQLEAEIKRLTQYRDLAASISDNAKGKALLDCLPNVLDEIVSKGGQRKAVIFTESVRTQTYLRDLLEQSGFEGQTVVLNGSNSDADSKALYKAWLDKHGDTNVVSGSKTADMKAAIVDAFRNDRTILIATESGAEGINLQFCSLLINYDLPWNPQRVEQRIGRCHRYGQKIDVTVINFLNRKNHAEARIHQLLEQKFKLFEGVFGSSDEVLGVIESGVDIERRILDIVQSCRTTDQIDAAFDRLQEEFSVEIDEAKKNVRDQLLAEMDDKVIERLLGRKDAVHSAIGDFKRALLGVARAELPEARFHDDHAQRFDYGGETWSSEWPEADERGWRFFRLGDEGLADQLVQKAKSRDLVPAMLRLDYSAYQGNMGDVAQLRGQSGWMRVARVRLKTPAKVYDELVFAAFSDGGTAIDPETASRMLYVPATTEGLGADTLPESDLTQTLNARQTAIIGMAQDRLSSFLNEEEERLDAWREDAKVSFDQQIKALNKEATEKKKLARATIGLEEKVTLQREAKALQRQVDDLQHQLYTRLREIDAERERMLDDIADQLNLTPEMTTLFTVRWTLA
SIO_010081: BVG79_RS13265
subclass of: SO_0000673
so part of: BVG79_RS13265
location: 8524..11385
location: region:8524-11385:1
so has part: feature:8524-11385:1:exon

WP_085787609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8524-11385:1:exon

BVG79_RS13270
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13270
so part of: sequence
location: 11385..13055
location: region:11385-13055:1
so has part: feature:11385-13055:1:exon
subclass of: SO_0000010

position:13055:1
position: 13055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11385-13055:1:exon

BVG79_RS13270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13270
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011112793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MAAKTKLELTWIGKNNRPRLEPRILIEEPEFSHHASTRREGDIFDNMLIHGDNLLALKALETDPAVRGKVKCIFIDPPYNTGSAFEHYDDGLEHSLWLTMMRDRLEILRNLLSEDGSIWMTIDDNEVHYLKVMCDEIFGRSNFFGSIIWQHSVQGKNDAKTVSLHHNYVLAYRKTEAFSRNLLPRKPEHNKNYNNPDKDPKGPWRAGDVRSPNYRENLMFDVTTPSGKIIPPPEKGWRWSKETFASKVETGEITFLNEDTRVLRKIYLCDQEGRVPESIWFGEEAGTTREATNDLRTLLGLGDATFATPKPEKLLERIIQIGTQPGDLVIDSFAGSGTTGAVAHKMGRRWIMVELGDHAKTHVAPRLQKVINGTDKGGVTEATNWRGGGGYRFFRLAPSLLQKDVWGNWVISKDYNAEMLAEAMCKHFNYVYAPSTEAYWMHGQASENAFIYVTTASLTIEQLRAISDEVGEDRSLLICCMAYEAQGESLSNLTLKKIPRVVLDRCEWGQDDYSLKINALPMAEDEPDDIEDTPAPKKSAKAKAADTPDLFGAEEN
SIO_010081: BVG79_RS13270
subclass of: SO_0000673
so part of: BVG79_RS13270
location: 11385..13055
location: region:11385-13055:1
so has part: feature:11385-13055:1:exon

WP_085787604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11385-13055:1:exon

BVG79_RS13275
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13275
old locus tag: BVG79_p2000010
so part of: sequence
location: 13059..15920
location: region:13059-15920:1
so has part: feature:13059-15920:1:exon
subclass of: SO_0000010

position:13059:1
position: 13059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15920:1
position: 15920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13059-15920:1:exon

BVG79_RS13275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13275
old locus tag: BVG79_p2000010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016736430.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MQTTDPKRAVLQINQRLSLRKPQAEALRRLDDIVDLVGPAKEADIDMARAAVREVYGDLADATFEEFERDFPSVCFALATGVGKTRLMGAFISYLYMIGKSRNFFVLAPNLTIYEKLLSDFQPSSPKYVFRGIEVFAHNAPLIVNAENYEEGRGVRGTDLFGQEGAIINIFNVSKINSEARGGNAPRIKRLQEYIGESYFSYLSELDDLVLLMDEAHRYRGSAGARAIAELKPILGLEVTATPKTVGARSQPFKNVVYRYDLPDAMEDGYVKEPAVGTRANFNPKTVDEDTLERIKLEDGIHYHEHVKVALETYARQNDVKVVRPFMLVVTQDTTHARQVNEFVQSDEFFGGRYKGRVAEIHSKLTGEESDENAQRLLNIEKAGDTDIVIHVNKLKEGWDVSNLFTIVPLRASASDILTEQTLGRGLRLPYGKRTGVEVVDTLTVIAHERFNELIEKAKEENGVTRKLKQVTIGEGGDVPPSKPVSVSAPSILDQMLAQAEAKTEPTVVVADDEKASDAPVQLVAKPTSAAPTQAPFSFSTPEELKVARTVLSVVIPQLSKEVSSIRDLNDPKVIERIAEAAIAAQKPEEGFLPSITKEKAVAVAQELCKNFVERTLAIPALTITPQQQVSFGFKRFDLDMKSWNFQPLSNELMIQALRTEKTSRISSEDKGDTANRLENYIVARLIDYPEIDYDAHAAILYDLAGQAVTQTRNRFADDDEQTRSVVRGHAKAMAESIFSQIKQNMWREHTNYRVSLTSAFGELRPQTFDTAGTSFIRDFKTPPDQKQEIRKYIFTGFVKGCYQYAKFDSNPERKLAIILEKDSSVRLWMKPGPNQFKIFDNHGAPYQPDFVVETDTGKLIIEVKRQSEMTATEVLRKADAASLWCHIATQAGAKSGEKPWHYLLVPESDVEENFTVSGLEAMHTRAPDTDLLSRYIFDEPSVSGEKKSALCV
SIO_010081: BVG79_RS13275
subclass of: SO_0000673
so part of: BVG79_RS13275
location: 13059..15920
location: region:13059-15920:1
so has part: feature:13059-15920:1:exon

WP_085787605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13059-15920:1:exon

BVG79_RS13280
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13280
so part of: sequence
location: complement(16010..16750)
location: region:16010-16750:-1
so has part: feature:16010-16750:-1:exon
subclass of: SO_0000010

position:16010:-1
position: 16010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16750:-1
position: 16750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16010-16750:-1:exon

BVG79_RS13280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLNIFGRNIPSVARLLIYPFSKKDLTAGQLFRMMRTRKIGYHGSVRVARGTKTAKSKNADPIVAECLKLIREDSGYERDEFAELLGVQHKTYRNYEGCIYPLPLKVVKTIREKLGYDLADPDLTSDAIITKIAEQRHDVAAAPDLAATEQVAKGVSCPQRIRTCLQAFRQELIGVQSKRKHDIRDAVFVGAAALFAFCLVVLRTEPQNIRLESIYTLMLSVSFLVAASIVPFQAIHMIQAAYRSRR
SIO_010081: BVG79_RS13280
subclass of: SO_0000673
so part of: BVG79_RS13280
location: complement(16010..16750)
location: region:16010-16750:-1
so has part: feature:16010-16750:-1:exon

WP_217622882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16010-16750:-1:exon

BVG79_RS13285
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
gene: mobI
locus tag: BVG79_RS13285
old locus tag: BVG79_p2000011
so part of: sequence
location: 17495..18004
location: region:17495-18004:1
so has part: feature:17495-18004:1:exon
subclass of: SO_0000010

position:17495:1
position: 17495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18004:1
position: 18004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17495-18004:1:exon

BVG79_RS13285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
gene: mobI
locus tag: BVG79_RS13285
old locus tag: BVG79_p2000011
inference: COORDINATES: protein motif:HMM:NF039622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer protein MobI(A/C)
translation: MSEEHPQESCSHEVRFHDFDSDWEPELLRSIPAMGYDLEGWARYWQDRAVEALKAYRKMDAGAEALNLGIVVRIREDTLGPRIYWVKFQGKARYRMGGDKFTPTEQIRMSGKYKYSDRIFARFPDAIRRELLLCEANFAWIRYRTDRLAQLRNLCRAHTGTYQLRANID
SIO_010081: BVG79_RS13285
subclass of: SO_0000673
so part of: BVG79_RS13285
location: 17495..18004
location: region:17495-18004:1
so has part: feature:17495-18004:1:exon

WP_157115760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17495-18004:1:exon

BVG79_RS13290
type: Gene
subclass of: SO_0000704
RO_0002162: 92947
locus tag: BVG79_RS13290
old locus tag: BVG79_p2000012
so part of: sequence
location: 18016..19254
location: region:18016-19254:1
so has part: feature:18016-19254:1:exon
subclass of: SO_0000010

position:18016:1
position: 18016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19254:1
position: 19254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18016-19254:1:exon

BVG79_RS13290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 92947
locus tag: BVG79_RS13290
old locus tag: BVG79_p2000012
inference: COORDINATES: protein motif:HMM:NF019153.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI domain-containing protein
translation: MFYDDRIILSYGRYLRNAQFRILHPHVTFGSYEQLIKEQLKKLPFLSHKETLLVRQMLRGGHDYMLCLPASSTHHHRTAGGLFYHSLETAGLAVDFFNSEFSKAVPSEAGDLAAFIAGFVHDLGKVRTMFKVYPANVQLQDLGFGEIEQPETDLPSWDPMAQSLWEWSQSFESPVTHLSLRYNQRPVIGHDTARGNGYWRQVVSDCLLESVSKRDEAYAEQLEGYLEGRLHRSPFVSAVKKADRRSVERDVNPLHRMEPKRSDLHAVRRFMEFAALSSWNNQYSMFIMADIWLGDQDLAIRVPLFRSRWRHMQTFREYLYGEDRYGAAYVDNGTPDIFYGILENHGVLRRVLPGMPDFSPIPSTYKPAPAFNATVVFADGDPAGGGREDLCYFPGGINIACEGLPVVRVILE
SIO_010081: BVG79_RS13290
subclass of: SO_0000673
so part of: BVG79_RS13290
location: 18016..19254
location: region:18016-19254:1
so has part: feature:18016-19254:1:exon

WP_085787608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18016-19254:1:exon