Saccharomonospora glauca K62 plasmid pSACGL01, whole genome shotgun sequence.
type: Entry
definition: Saccharomonospora glauca K62 plasmid pSACGL01, whole genome shotgun sequence.
sequence version: NZ_CM001485.1
sequence date: 2022-12-29
sequence: sequence
division: CON
label: NZ_CM001485.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02441787
keyword: WGS
keyword: NONCONTIGUOUS_FINISHED
keyword: RefSeq
source: Saccharomonospora glauca K62
organism: Saccharomonospora glauca K62
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001485.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4092794\nSource DNA and organism available from Hans-Peter Klenk\n(hans-peter.klenk@dsmz.de)\nContacts: Hans-Peter Klenk (hans-peter.klenk@dsmz.de)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Noncontiguous Finished\nCurrent Finishing Status :: Noncontiguous Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/29/2022 01:21:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,351\nCDSs (total) :: 4,294\nGenes (coding) :: 4,241\nCDSs (with protein) :: 4,241\nGenes (RNA) :: 57\nrRNAs :: 3, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 53\nCDSs (without protein) :: 53\nPseudo Genes (ambiguous residues) :: 0 of 53\nPseudo Genes (frameshifted) :: 18 of 53\nPseudo Genes (incomplete) :: 38 of 53\nPseudo Genes (intern…

sequence
subclass of: SO_0000155
sequence length: 25362
topology: circular
so has quality: SO_0000988
location: 1..25362
location: region:1-25362:1
RO_0002162: 928724

NZ_CM001485
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02441787
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Mikhailova, N.
author: Held, B.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Pagani, I.
author: Brambilla, E.-M.
author: Klenk, H.-P.
author: Woyke, T.
journal: Submitted (26-JAN-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

2
title: Direct Submission
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Land, M.L.
author: Hauser, L.
author: Brambilla, E.
author: Klenk, H.-P.
author: Woyke, T.J.
journal: Submitted (22-SEP-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25362:1
position: 25362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25362:1:source
so part of: sequence
organism: Saccharomonospora glauca K62
mol type: genomic DNA
strain: K62
isolation source: composted garbage
type material: type strain of Saccharomonospora glauca
plasmid: pSACGL01

928724
type: Taxonomy
SIO_000068: taxonomy

SACGLDRAFT_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS22155
old locus tag: SacglDRAFT_00001
so part of: sequence
location: complement(448..813)
location: region:448-813:-1
so has part: feature:448-813:-1:exon
subclass of: SO_0000010

position:448:-1
position: 448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813:-1
position: 813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448-813:-1:exon

SACGLDRAFT_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS22155
old locus tag: SacglDRAFT_00001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF3800 domain-containing protein
translation: MRWVLEDIDEYASDRGEYALVIADEPGQNSQQSQYRADLTGYRQFGTGGWRDRRITRVVDTLHFAPSLSSRLVQASDLVAFLRHRISTKVDGDPRAIRANTRLWERLAGRIHYFRTWSPPH
SIO_010081: SACGLDRAFT_RS22155
subclass of: SO_0000673
so part of: SACGLDRAFT_RS22155
location: complement(448..813)
location: region:448-813:-1
so has part: feature:448-813:-1:exon

WP_083853001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448-813:-1:exon

SACGLDRAFT_RS21305
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21305
old locus tag: SacglDRAFT_00002
so part of: sequence
location: 1027..1398
location: region:1027-1398:1
so has part: feature:1027-1398:1:exon
subclass of: SO_0000010

position:1027:1
position: 1027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398:1
position: 1398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027-1398:1:exon

SACGLDRAFT_RS21305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21305
old locus tag: SacglDRAFT_00002
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLINMTPHPVRIYGAGTPDRVEDPDDGVVRVLEPSGEFARLSESVLGEDTVLDEEGAEIPVSLVSYAEVEGLPEPQEGVAYVVPVMTALAAAGRTDLLVPYEQVRNQEGTVVGCRRLGRVAR
SIO_010081: SACGLDRAFT_RS21305
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21305
location: 1027..1398
location: region:1027-1398:1
so has part: feature:1027-1398:1:exon

WP_005467135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1027-1398:1:exon

SACGLDRAFT_RS21315
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21315
old locus tag: SacglDRAFT_00004
so part of: sequence
location: 2332..2919
location: region:2332-2919:1
so has part: feature:2332-2919:1:exon
subclass of: SO_0000010

position:2332:1
position: 2332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919:1
position: 2919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2332-2919:1:exon

SACGLDRAFT_RS21315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21315
old locus tag: SacglDRAFT_00004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIQIIKASRESELFFEMDNGAAPTYLEVDLPGREVSVGYHAGSGTPGRVWHGYTRRYDIPLLTADAANRLMERIAPLAERMCVDWSEEIGRSGRAEAVLGADGRAAEAELIAALPDENTVDPEDVIDVWDAANLFVGNEAEEYGITADTSDAELERIATQMLDEVRSSSASGVVVAPGLTDYLRDLRDELVEQD
SIO_010081: SACGLDRAFT_RS21315
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21315
location: 2332..2919
location: region:2332-2919:1
so has part: feature:2332-2919:1:exon

WP_005467137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2332-2919:1:exon

SACGLDRAFT_RS21325
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21325
old locus tag: SacglDRAFT_00006
so part of: sequence
location: 3203..4072
location: region:3203-4072:1
so has part: feature:3203-4072:1:exon
subclass of: SO_0000010

position:3203:1
position: 3203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072:1
position: 4072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203-4072:1:exon

SACGLDRAFT_RS21325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21325
old locus tag: SacglDRAFT_00006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPRNLPRLRDGLVRHLTNPDAPVRTNTGAENQEALDGLTRNAQEARLFWASEDMTALAVSAGRQLDDAYWGAEARPAPAGLILFDGGVGAIEAGAGARRVEIPVEACAWGPHPQGCLLWLLISRQRLQHESGPDVELIVEQTPPLIPIWGTVLDAAEPVPMTEIDPEKRTVVAALAAAWLLMAQPTLVETGRERAPGRVRRSYARAGRPEPEITLVHLRRQYGDHSSPSPSPESGGRYRYRWVVSGHWRNQPYGPGHSRRRRQWIPAYIKGPDGAPILARERVNVWRR
SIO_010081: SACGLDRAFT_RS21325
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21325
location: 3203..4072
location: region:3203-4072:1
so has part: feature:3203-4072:1:exon

WP_005467139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3203-4072:1:exon

SACGLDRAFT_RS21330
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21330
old locus tag: SacglDRAFT_00007
so part of: sequence
location: 4210..4650
location: region:4210-4650:1
so has part: feature:4210-4650:1:exon
subclass of: SO_0000010

position:4210:1
position: 4210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4650:1
position: 4650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4210-4650:1:exon

SACGLDRAFT_RS21330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21330
old locus tag: SacglDRAFT_00007
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTTDSYHPPLTTQLGRQYLAAGADVDRLLDSDLDSDWLLVLETYRERKLLRYRLDRAAEDSEKVAKLTAERAELAEVSALHALRATKQLLDGLLDQRRRLMIDARDEGASWADIGAALDVSRQAAHELYHRQIKNPWTATRVRKP
SIO_010081: SACGLDRAFT_RS21330
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21330
location: 4210..4650
location: region:4210-4650:1
so has part: feature:4210-4650:1:exon

WP_005467140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4210-4650:1:exon

SACGLDRAFT_RS21335
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21335
old locus tag: SacglDRAFT_00009
so part of: sequence
location: complement(5184..5528)
location: region:5184-5528:-1
so has part: feature:5184-5528:-1:exon
subclass of: SO_0000010

position:5184:-1
position: 5184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5528:-1
position: 5528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5184-5528:-1:exon

SACGLDRAFT_RS21335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21335
old locus tag: SacglDRAFT_00009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF3307 domain-containing protein
translation: MHHSIRRAAVLAIAWLAGQAGHHIGDYLVQRDCDAQRKQQHTGEGRRALANHAVSYGITQAVTRALAYRVAGLRVPARAQLAAAVVETIAHAAIDDGRLLRRFAHGTGKGGFHG
SIO_010081: SACGLDRAFT_RS21335
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21335
location: complement(5184..5528)
location: region:5184-5528:-1
so has part: feature:5184-5528:-1:exon

WP_005467141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5184-5528:-1:exon

SACGLDRAFT_RS21340
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21340
old locus tag: SacglDRAFT_00010
so part of: sequence
location: complement(5625..5849)
location: region:5625-5849:-1
so has part: feature:5625-5849:-1:exon
subclass of: SO_0000010

position:5625:-1
position: 5625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5849:-1
position: 5849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5625-5849:-1:exon

SACGLDRAFT_RS21340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21340
old locus tag: SacglDRAFT_00010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIDLDSVLDLVNSHARQAHALGQQAMEAHNASSREADEMARQRLLATRETCLRLGELYARIAGVYATLAAASK
SIO_010081: SACGLDRAFT_RS21340
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21340
location: complement(5625..5849)
location: region:5625-5849:-1
so has part: feature:5625-5849:-1:exon

WP_005467142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5625-5849:-1:exon

SACGLDRAFT_RS21345
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21345
old locus tag: SacglDRAFT_00011
so part of: sequence
location: complement(5989..6192)
location: region:5989-6192:-1
so has part: feature:5989-6192:-1:exon
subclass of: SO_0000010

position:5989:-1
position: 5989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6192:-1
position: 6192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5989-6192:-1:exon

SACGLDRAFT_RS21345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21345
old locus tag: SacglDRAFT_00011
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDNTPTLTRVGELRRQREELDREIAALTPHAIEEGYAAGLRAEVIAVELGISVSRVHQIRREHRDT
SIO_010081: SACGLDRAFT_RS21345
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21345
location: complement(5989..6192)
location: region:5989-6192:-1
so has part: feature:5989-6192:-1:exon

WP_005467143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5989-6192:-1:exon

SACGLDRAFT_RS21350
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21350
old locus tag: SacglDRAFT_00012
so part of: sequence
location: 6373..6660
location: region:6373-6660:1
so has part: feature:6373-6660:1:exon
subclass of: SO_0000010

position:6373:1
position: 6373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6660:1
position: 6660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6373-6660:1:exon

SACGLDRAFT_RS21350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21350
old locus tag: SacglDRAFT_00012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015786933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPVDPAAFARSQRLAFDGHNLHIGSSSVVHAVDWLPWVDDHKLPAPACRQGFAGHGAQGELRPTRHPVSCRRCRRLRGLEGPTSTQAEELTLW
SIO_010081: SACGLDRAFT_RS21350
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21350
location: 6373..6660
location: region:6373-6660:1
so has part: feature:6373-6660:1:exon

WP_005467144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6373-6660:1:exon

SACGLDRAFT_RS21355
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21355
old locus tag: SacglDRAFT_00013
so part of: sequence
location: 7049..7867
location: region:7049-7867:1
so has part: feature:7049-7867:1:exon
subclass of: SO_0000010

position:7049:1
position: 7049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7867:1
position: 7867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7049-7867:1:exon

SACGLDRAFT_RS21355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21355
old locus tag: SacglDRAFT_00013
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MASARVAAVAMQKGGVGKTTSTINLARAAAVYHQARVLVVDFDPQGNCTSTLAADELDPEGLTVADTVLPDTDVTMADVVVPTIWDGVDLAPAGETLATAEARIAASTAGREHRLRKSLAPMLDRYDLVLIDNAPALGLLLVNALTAADVAVLVAEADQWSADGLALLRKTVGMVSEYANPTLRVAGVMINRWRNTSTATELADEIAAGVEAHFPGTEVWLDRRVPLWQPIVDYMQAGRGLDEGPARLRLLAETTYQPIAGELLGVDVEVGA
SIO_010081: SACGLDRAFT_RS21355
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21355
location: 7049..7867
location: region:7049-7867:1
so has part: feature:7049-7867:1:exon

WP_005467145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7049-7867:1:exon

SACGLDRAFT_RS21360
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21360
old locus tag: SacglDRAFT_00014
so part of: sequence
location: 7984..8310
location: region:7984-8310:1
so has part: feature:7984-8310:1:exon
subclass of: SO_0000010

position:7984:1
position: 7984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8310:1
position: 8310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7984-8310:1:exon

SACGLDRAFT_RS21360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21360
old locus tag: SacglDRAFT_00014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADARTDVQTGVQTGVRADVRARRSDPEREQRARARTEVERAALAWGAARRKLGQREAAWLETLARARELGELPGVLHGFVLDAARRAGIDPGEVPAEVWRAAGLDHP
SIO_010081: SACGLDRAFT_RS21360
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21360
location: 7984..8310
location: region:7984-8310:1
so has part: feature:7984-8310:1:exon

WP_005467146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7984-8310:1:exon

SACGLDRAFT_RS21365
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21365
old locus tag: SacglDRAFT_00015
so part of: sequence
location: complement(8432..9217)
location: region:8432-9217:-1
so has part: feature:8432-9217:-1:exon
subclass of: SO_0000010

position:8432:-1
position: 8432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9217:-1
position: 9217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8432-9217:-1:exon

SACGLDRAFT_RS21365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21365
old locus tag: SacglDRAFT_00015
inference: COORDINATES: protein motif:HMM:NF015736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaB-like helicase C-terminal domain-containing protein
translation: MNSETSNASTTALTTGLTGLDNLLGGLRGGSLYAIAGRSSAGKSTLGLGFARAVARASNVSCAVFSMQMANPETILRTVAAESSIRLENLRAQSMALTPDEQERAERASYLPLMISDTRKASFEALLGECLTMKQDTGLGMVLVDSIDHVGLDRDGGRDEEASNAQRLKYLARELDVPVVVTVHLDRLSRELPERPGLWNLWVSSPVEESSDVVILIDGPSDDTGFPGDEFEVELHVAKNIHGETGTVAATRQLQFARFVD
SIO_010081: SACGLDRAFT_RS21365
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21365
location: complement(8432..9217)
location: region:8432-9217:-1
so has part: feature:8432-9217:-1:exon

WP_005467147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8432-9217:-1:exon

SACGLDRAFT_RS21640
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
gene: dnaB
locus tag: SACGLDRAFT_RS21640
old locus tag: SacglDRAFT_00016
so part of: sequence
location: complement(9276..10631)
location: region:9276-10631:-1
so has part: feature:9276-10631:-1:exon
subclass of: SO_0000010

position:9276:-1
position: 9276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10631:-1
position: 10631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9276-10631:-1:exon

SACGLDRAFT_RS21640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
gene: dnaB
locus tag: SACGLDRAFT_RS21640
old locus tag: SacglDRAFT_00016
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013133774.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MSSPMMDRTDVHDQIIYSEDAERSVLGGMMLSETAIADVVEVVRVEDFYRPQHQAIFAAIVGLYHRNCPIDAVAVGDELTRRGEFTRVGGGPYLHTLIAAVPTAANVSYYARIVQEKAAQRRLIEAGHRIVQYGQNASGEEIATALARAQEELDQAANVKTANSEIVRAGDLIDEMYAEIEKFQSGSQETGIGTGIMDLDTVLHGLRPGQMITIAARPGVGKSVLGVQLARQCAIEQGKPAVIFSLEMSRMEIMIRMAAAESGVRLDAIHSEHGLSDHDWARLARGMSRVKEAPLFIDDEATATVTEIRAKAKRLHKRHDLGLIVVDYLQLMGSGKRVESRQQEVSEFSRQLKLLAKELDVPVVAISQLNRGPEQRQDKRPMLADLRESGSIEQDSDVVILIHRPDANGAQDEPRAGEADLIVAKNRGGQTATVTVAHQMHWSRFKDLARE
SIO_010081: SACGLDRAFT_RS21640
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21640
location: complement(9276..10631)
location: region:9276-10631:-1
so has part: feature:9276-10631:-1:exon

WP_005467148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9276-10631:-1:exon

SACGLDRAFT_RS21375
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21375
old locus tag: SacglDRAFT_00017
so part of: sequence
location: complement(10713..11801)
location: region:10713-11801:-1
so has part: feature:10713-11801:-1:exon
subclass of: SO_0000010

position:10713:-1
position: 10713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11801:-1
position: 11801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10713-11801:-1:exon

SACGLDRAFT_RS21375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21375
old locus tag: SacglDRAFT_00017
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDHEASNEQFITQAATAPSVGLSPRWVQYSGISTEARAIAELLADNVLYVQGDHAGGELDREYLAYHADLGRADKVKKHLDELIEIGFLTIFDGGVDPETGRRRQRRDASGAPLPARYVISLEPPAGYVGPRNATEARAQFIVDRDQAYRAAEKTGRKPRAGRVTIRRSEVGRLHTEGPVRAVGAEPATVTELRPSRTTVSREDVRDALRTVGWNSAKAAPTPKEFGELVDLARAAMTRYGATLDQVRWYAARKVREAKRNPVAYVLTAFRARAAEIAHEPDPAENLVFEDDPELVAAVTRKAAVPETVRAVPESEAPSTSTPVLPACSRCGAREGDPWSFRYLITEDGDEVECTACRSQVA
SIO_010081: SACGLDRAFT_RS21375
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21375
location: complement(10713..11801)
location: region:10713-11801:-1
so has part: feature:10713-11801:-1:exon

WP_005467149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10713-11801:-1:exon

SACGLDRAFT_RS21380
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21380
old locus tag: SacglDRAFT_00018
so part of: sequence
location: complement(12030..12224)
location: region:12030-12224:-1
so has part: feature:12030-12224:-1:exon
subclass of: SO_0000010

position:12030:-1
position: 12030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12224:-1
position: 12224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12030-12224:-1:exon

SACGLDRAFT_RS21380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21380
old locus tag: SacglDRAFT_00018
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHLKTFARIWPSTLRAVVADRAPLMLTKYNRPYVAVVPADTWLEAEQALAEKRAREQSGEAVSV
SIO_010081: SACGLDRAFT_RS21380
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21380
location: complement(12030..12224)
location: region:12030-12224:-1
so has part: feature:12030-12224:-1:exon

WP_005467150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12030-12224:-1:exon

SACGLDRAFT_RS21385
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21385
old locus tag: SacglDRAFT_00020
so part of: sequence
location: complement(14578..15225)
location: region:14578-15225:-1
so has part: feature:14578-15225:-1:exon
subclass of: SO_0000010

position:14578:-1
position: 14578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15225:-1
position: 15225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14578-15225:-1:exon

SACGLDRAFT_RS21385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21385
old locus tag: SacglDRAFT_00020
inference: COORDINATES: protein motif:HMM:NF012792.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTTKRYTIWTAREHEVDTVMRLLHERVQWLRDRGSDQWSTYQRWRPEIENSVRRHATWLLRDADTYEAVGTITMSPHSDPEFWTEQEREVRALYLAKLATSPARRGEGLGALLLEFSHYCAVADQYRELRVDVWKTAHGLHNYYRQQGWAYLRTVDLPHRHSGALFTRQVVAPTVNLPPHGLTIRPAGNGNVPKRPIEPGELAWYGRDALMYARR
SIO_010081: SACGLDRAFT_RS21385
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21385
location: complement(14578..15225)
location: region:14578-15225:-1
so has part: feature:14578-15225:-1:exon

WP_005467152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14578-15225:-1:exon

SACGLDRAFT_RS21390
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21390
old locus tag: SacglDRAFT_00021
so part of: sequence
location: complement(15222..15971)
location: region:15222-15971:-1
so has part: feature:15222-15971:-1:exon
subclass of: SO_0000010

position:15222:-1
position: 15222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15971:-1
position: 15971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15222-15971:-1:exon

SACGLDRAFT_RS21390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21390
old locus tag: SacglDRAFT_00021
inference: COORDINATES: protein motif:HMM:NF019322.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MTTPAGAPPAYVRIATEWAERIDSGELQHGDPLPTREELAEQYGVSKTVIRDALSLLHQDGYLQTATRRGTRVFRLPRYELPMYSWESDDRGRDAYEDAVRAQGGNPGQQIEVQTITPSADVANALQLEDGQLALARLRIRTIDGIPYCTADSYFPYSLVRDSKLVNPANISRGGRHVLRELGLEMVRHRDRIHSRRPRAREITDLGIPSGLPILRHDRISYTADGTPIRYMVSAFPSDRWEITYEVEK
SIO_010081: SACGLDRAFT_RS21390
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21390
location: complement(15222..15971)
location: region:15222-15971:-1
so has part: feature:15222-15971:-1:exon

WP_005467153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15222-15971:-1:exon

SACGLDRAFT_RS21395
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21395
old locus tag: SacglDRAFT_00022
so part of: sequence
location: 16482..16763
location: region:16482-16763:1
so has part: feature:16482-16763:1:exon
subclass of: SO_0000010

position:16482:1
position: 16482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16763:1
position: 16763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16482-16763:1:exon

SACGLDRAFT_RS21395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21395
old locus tag: SacglDRAFT_00022
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTVPIGDAITRRIVIRPAEVPACELPESEPTLADLLAIEYGDDVLVQRRIDQALRLSAFEHTHRELMELRRRYRDLADEDEVDTTPTFWRAA
SIO_010081: SACGLDRAFT_RS21395
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21395
location: 16482..16763
location: region:16482-16763:1
so has part: feature:16482-16763:1:exon

WP_005467154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16482-16763:1:exon

SACGLDRAFT_RS21400
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21400
old locus tag: SacglDRAFT_00023
so part of: sequence
location: 16760..16948
location: region:16760-16948:1
so has part: feature:16760-16948:1:exon
subclass of: SO_0000010

position:16760:1
position: 16760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16948:1
position: 16948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16760-16948:1:exon

SACGLDRAFT_RS21400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21400
old locus tag: SacglDRAFT_00023
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTLTTATADTEVGRRIRALLDELSFVRSESYRAVHTAIEVETAEADVWAAIADAATTPIPT
SIO_010081: SACGLDRAFT_RS21400
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21400
location: 16760..16948
location: region:16760-16948:1
so has part: feature:16760-16948:1:exon

WP_005467155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16760-16948:1:exon

SACGLDRAFT_RS21405
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21405
old locus tag: SacglDRAFT_00024
so part of: sequence
location: 17126..18136
location: region:17126-18136:1
so has part: feature:17126-18136:1:exon
subclass of: SO_0000010

position:17126:1
position: 17126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18136:1
position: 18136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17126-18136:1:exon

SACGLDRAFT_RS21405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21405
old locus tag: SacglDRAFT_00024
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSATIPEMPTQRLLSGLYVPADLGESTAPIDVVDQPQPDPVPSSVPDPATEQPRPEPDLVSAAPVEVFRPETPTPAPEPVATSTTTPPPTRPAPQPKPEPQPLKPPSAPIFWGSRALEAVYWIAILTGAIGQVIFFGGLFDLGWPGYVAAGIIATTAETIMISAGDTALKFFTNGVPGRRWWIFLAVSIVAACTAAALNVTHWVDKNVSMAVLFGGIAMLGYILHVTDGFVRAIAYREAKAAYEAEVQRREAEAAKAAAPPRTTALLRPAASKSTKTKTKTSSKRKAGKPRLTPEQAKAWSEENRKPGPSAVINHFKAQGYDTPSVATMRRWLNS
SIO_010081: SACGLDRAFT_RS21405
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21405
location: 17126..18136
location: region:17126-18136:1
so has part: feature:17126-18136:1:exon

WP_005467156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17126-18136:1:exon

SACGLDRAFT_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS22890
old locus tag: SacglDRAFT_00025
so part of: sequence
location: 18339..18533
location: region:18339-18533:1
so has part: feature:18339-18533:1:exon
subclass of: SO_0000010

position:18339:1
position: 18339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18533:1
position: 18533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18339-18533:1:exon

SACGLDRAFT_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS22890
old locus tag: SacglDRAFT_00025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTTTEPVERLRIALDYVAAAYKRSAQRGRTTTTHRTVFDAIEVAVRSLIRCGDALLDPSRKGR
SIO_010081: SACGLDRAFT_RS22890
subclass of: SO_0000673
so part of: SACGLDRAFT_RS22890
location: 18339..18533
location: region:18339-18533:1
so has part: feature:18339-18533:1:exon

WP_232284188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18339-18533:1:exon

SACGLDRAFT_RS21415
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21415
old locus tag: SacglDRAFT_00026
so part of: sequence
location: 18540..19028
location: region:18540-19028:1
so has part: feature:18540-19028:1:exon
subclass of: SO_0000010

position:18540:1
position: 18540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19028:1
position: 19028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18540-19028:1:exon

SACGLDRAFT_RS21415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21415
old locus tag: SacglDRAFT_00026
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSALPKRLTDKLAGKATRTEGQAKPTHLRPVPDDGTVPGATEPGPAVRPAPPSLLERAKAEFTPPDIWSVDRPALSKIVKYGRYGQQVPDEGMARTAAKAWSWFAALNAAVAYAWQWVTERPSRTTIAVVLVVLSTLVPAARAVLTVLLWPAHAAIELITDH
SIO_010081: SACGLDRAFT_RS21415
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21415
location: 18540..19028
location: region:18540-19028:1
so has part: feature:18540-19028:1:exon

WP_005467158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18540-19028:1:exon

SACGLDRAFT_RS21420
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21420
old locus tag: SacglDRAFT_00027
so part of: sequence
location: 19042..19458
location: region:19042-19458:1
so has part: feature:19042-19458:1:exon
subclass of: SO_0000010

position:19042:1
position: 19042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19458:1
position: 19458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19042-19458:1:exon

SACGLDRAFT_RS21420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21420
old locus tag: SacglDRAFT_00027
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLATLGSLLAAVFFFVLYRTTKGRRRIPWPVPVILLFLTSTSLAVSPPVGWLMGKVADLLGSFGLSAAGTAALTIVVLLVALVLDLMDKKPDGVAKTALIVIPLLAVIASGPVGDAVRNVNDGVARMGTNVISTVTGE
SIO_010081: SACGLDRAFT_RS21420
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21420
location: 19042..19458
location: region:19042-19458:1
so has part: feature:19042-19458:1:exon

WP_005467159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19042-19458:1:exon

SACGLDRAFT_RS21425
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21425
old locus tag: SacglDRAFT_00028
so part of: sequence
location: 19586..20929
location: region:19586-20929:1
so has part: feature:19586-20929:1:exon
subclass of: SO_0000010

position:19586:1
position: 19586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20929:1
position: 20929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19586-20929:1:exon

SACGLDRAFT_RS21425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21425
old locus tag: SacglDRAFT_00028
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLVFLVIVSAYAFTGLVMDGAAAVRGKPLPSVLRREARQQARDYRRKHPSYLGTIWRNALDSWADASTRRHNRRIAKREAQEPKKAAEWVAKQIAKEERRADRRRRFAERVGVLWGKAREIPATIRERRLEDEAWDANARVDAERDPNVPAGLKGSDDLDDEMEGATVLPFRPRAHDDISDDVEEAGDDEDDSGADSSVVHDGEKPSSATDPMLDAAFAWDLLTCAWRDDDGSKCRQPKAPNSTYCVVHRRRAHDDISDAADEAGDVVDLDALSEKLGSSTTNQPDTGQDNPATKEEGNMSNAAGISGEINDLSSGIELARQMRRYITDLQNTLDALQATLTQTSTGLRQVPASLELASASLQTHGLNGPALEELTVARERASMVSSALAEAVSALSSVPDHLAIADDSFSRMEGELSSQLGISEQVGAAAARGGVARETDFYLRG
SIO_010081: SACGLDRAFT_RS21425
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21425
location: 19586..20929
location: region:19586-20929:1
so has part: feature:19586-20929:1:exon

WP_005467160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19586-20929:1:exon

SACGLDRAFT_RS21430
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21430
old locus tag: SacglDRAFT_00029
so part of: sequence
location: 21030..23141
location: region:21030-23141:1
so has part: feature:21030-23141:1:exon
subclass of: SO_0000010

position:21030:1
position: 21030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23141:1
position: 23141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21030-23141:1:exon

SACGLDRAFT_RS21430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21430
old locus tag: SacglDRAFT_00029
inference: COORDINATES: protein motif:HMM:NF019826.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MIKTDPVPVPMDEHTTESPQSWRERQKAAAKKKAAAMWEDTKRSSKSIVYRNRRQLYPLAYTSATAAVGTTGALVAEYSDLAMPTVVMGTGAVALTAGYAALRKIGSKLPDGILGRFKIGLMAGCAWCATLPLTGADAATMWLALGLGTVSLSARWWQRIRPGYPSGPTVAEPAPEPTRDVDEEMATAYELMQVWADEIGCTNGVLAGTRLDNPRLFEAGVVFTISLKGTRHNLDAVRNAVDKIAIAVGYWPKDISVSQGPQPHLVELRVVTRPDAIDGGFHGPVIVDDGKGNVWVEIGPYTDGEGVERWHVFEPNSVVGGFVLGSKGSGKSRLIELVAIALRKLGVEIWYLDPQNGASSPALIETADWPMKGMHKGGTLFGNVLDLLDALEDVTTVRSAENTDVLKVEGFTHTRERPAIVVIVDECHMVFNEKNPRTGNTFGHDFGELDRIMRKCGLAIIGASQTYTMDTFGQSAALRSGLVGGNCVIMRMLEKSHCGLLPGNVPAPWDIPKGGGYGYCLGSDRDGVLWRSRKPDNVEQWMRAYPPATLDDLVRNVLGEMYENRHEAAEQDSAYMRDLLERMRTATPEEARQIRAEIRRRRGGKAGDSEQPQQAGVLAVPEPPAMITALNPAPAASDPQVPLRELGDGEQQLMELLADGREWRTSEMAERLGVSEVTVRKRIKRLESRLVLVRKGVYRAKHL
SIO_010081: SACGLDRAFT_RS21430
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21430
location: 21030..23141
location: region:21030-23141:1
so has part: feature:21030-23141:1:exon

WP_005467161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21030-23141:1:exon

SACGLDRAFT_RS21435
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21435
old locus tag: SacglDRAFT_00030
so part of: sequence
location: 23169..23855
location: region:23169-23855:1
so has part: feature:23169-23855:1:exon
subclass of: SO_0000010

position:23169:1
position: 23169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23855:1
position: 23855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23169-23855:1:exon

SACGLDRAFT_RS21435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21435
old locus tag: SacglDRAFT_00030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSYFAVTVDTSAYLGDTLPNAGGNSTVLTPTLGVSLDPRVLPSPWNRRDSRCYHLGRLLDGTYARVVRVSPIGEVRPHRGWEDGTVITERTLLEAEGGWRLEQFEPADGLLGPCANYIVAALNRLHELTDRELGDQYLDELRALSHFDWVHAERACLEALRHRGADPVWLRCDALDGQPIHALAARDLIGTVPGWDQDAYDLLSTPYRRCVGQPLHPDDEPVHVLAA
SIO_010081: SACGLDRAFT_RS21435
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21435
location: 23169..23855
location: region:23169-23855:1
so has part: feature:23169-23855:1:exon

WP_005467162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23169-23855:1:exon

SACGLDRAFT_RS21440
type: Gene
subclass of: SO_0000704
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21440
old locus tag: SacglDRAFT_00031
so part of: sequence
location: complement(24159..25337)
location: region:24159-25337:-1
so has part: feature:24159-25337:-1:exon
subclass of: SO_0000010

position:24159:-1
position: 24159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25337:-1
position: 25337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24159-25337:-1:exon

SACGLDRAFT_RS21440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 928724
locus tag: SACGLDRAFT_RS21440
old locus tag: SacglDRAFT_00031
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTALAPTETTIEHVDADHWTERVAAPTMSWLLARRSDHTKTAYATRLGIPREHQTWRGPNTRSSSHKPVPPYAWFRWCLARDLDPLTDVTVDVMRAWVATIREHGGTDATIQAYAGAVSAWYREMRKRSLTDIVMSDVLDTDERRAQGISTVSPSSPTHALTYEQAMALRASARMDPRPTRARNIAIVELLLSTGVRAAELCALTRGSISREGREGVLTVHGKGGKTRTVRLTSTALAAVDAYLLERDQADAGTDVALAGQVSGQSTRNEPLFLSSRTRKPLTPAQIRQLLSRLCGVAARHGTTAAARRAAAELAPICGSIHPHQCRRFYAVHAVSMGVSVEQVRDDLGHASLTTTQRYLADAARLTHSGAYAVSASLEAGNAEWGIAEPLI
SIO_010081: SACGLDRAFT_RS21440
subclass of: SO_0000673
so part of: SACGLDRAFT_RS21440
location: complement(24159..25337)
location: region:24159-25337:-1
so has part: feature:24159-25337:-1:exon

WP_157608949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24159-25337:-1:exon