Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.
Whole genome sequence of Acidiphilium multivorum AIU301
Submitted (28-DEC-2010) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, NITE Bioresource Information Center (NBIC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/
REFSEQ INFORMATION: The reference sequence is identical to\nAP012036.1.\n\n\nPlease visit our web site.\nURL:http://www.bio.nite.go.jp/\n\nDOGAN ; Database of Genomes Analyzed at NITE\nThe database contains genome sequence data, physical maps and the\ngenomic and proteomic data of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nGenome Coverage :: 8x\nSequencing Technology :: ABI3730\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:32:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,010\nCDSs (total) :: 3,953\nGenes (coding) :: 3,844\nCDSs (with protein) :: 3,844\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 109\nCDSs (without protein) :: 109\nPseudo Genes (ambiguous residues) :: 0 of 109\nPseudo Genes (frameshifted) :: 45 of 109\nPseudo Genes (incomplete) :: 92 of 109\nPseudo Genes (internal stop) :: 13 of 109\nPseudo Genes (multiple problems) :: 36 of 109\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007424908.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007424907.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424906.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930617.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424903.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013634994.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013752.2
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013639142.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013634867.1
GO:0020037 - heme binding [Evidence IEA]
heme NO-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013634868.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092710.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007424934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930526.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007668916.1
IS1595-like element ISAcr1 family transposase
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007424852.1
COORDINATES: similar to AA sequence:RefSeq:WP_018912538.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000136268.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007424855.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011512244.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: similar to AA sequence:RefSeq:WP_011930539.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424858.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010655111.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007425067.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424860.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424861.1
COORDINATES: similar to AA sequence:RefSeq:WP_012537218.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020839.2
COORDINATES: similar to AA sequence:RefSeq:WP_013634882.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF025433.2
LssY C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013634886.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_007424867.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930577.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007424869.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424870.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019351.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611133.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007424874.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_007425030.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634894.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612078.1
COORDINATES: protein motif:HMM:NF017528.2
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_007424879.1
GO:0043819 - precorrin-6A synthase (deacetylating) activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013634897.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007424881.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013067763.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007424883.1
COORDINATES: similar to AA sequence:RefSeq:WP_002719984.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007422871.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013634902.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013067768.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014496544.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007422875.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422876.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422878.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422877.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007422879.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002720982.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02476.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015921218.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018633597.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_013634908.1
COORDINATES: similar to AA sequence:RefSeq:WP_007795075.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421545.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007421544.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007421543.1
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007421542.1
COORDINATES: protein motif:HMM:NF013311.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF013555.2
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490454.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006919462.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019238166.1
COORDINATES: similar to AA sequence:RefSeq:WP_009175411.1
COORDINATES: similar to AA sequence:RefSeq:WP_013041603.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013041604.1
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001173919.1
COORDINATES: similar to AA sequence:RefSeq:WP_011941289.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930494.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010400094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007701406.1
COORDINATES: similar to AA sequence:RefSeq:WP_010400106.1
COORDINATES: similar to AA sequence:RefSeq:WP_010400104.1
COORDINATES: similar to AA sequence:RefSeq:WP_007701421.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007701426.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_007701428.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007701431.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005854676.1
COORDINATES: similar to AA sequence:RefSeq:WP_020045025.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420431.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_010513288.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013634938.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421629.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634941.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007421529.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421528.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421527.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039963.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013634946.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421524.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007421523.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007421522.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039960.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013635043.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421583.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634951.1
COORDINATES: similar to AA sequence:RefSeq:WP_013640665.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013635060.1
COORDINATES: similar to AA sequence:RefSeq:WP_003290589.1
COORDINATES: similar to AA sequence:RefSeq:WP_004210833.1
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: similar to AA sequence:RefSeq:WP_020813507.1
COORDINATES: similar to AA sequence:RefSeq:WP_013200430.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519616.1
COORDINATES: similar to AA sequence:RefSeq:WP_014763310.1
COORDINATES: similar to AA sequence:RefSeq:WP_003995001.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018237067.1
COORDINATES: similar to AA sequence:RefSeq:WP_018149706.1
COORDINATES: similar to AA sequence:RefSeq:WP_010912869.1
COORDINATES: similar to AA sequence:RefSeq:WP_007600076.1
COORDINATES: similar to AA sequence:RefSeq:WP_008872814.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424223.1
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_011930786.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013641264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930788.1
COORDINATES: similar to AA sequence:RefSeq:WP_018009783.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_007425094.1
COORDINATES: similar to AA sequence:RefSeq:WP_013641259.1
COORDINATES: protein motif:HMM:NF037544.2
type IV secretion system lipoprotein VirB7
COORDINATES: similar to AA sequence:RefSeq:WP_013634982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930793.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_013641255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013641254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013635107.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425084.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930797.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011930798.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011930799.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930800.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930801.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425081.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425051.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930804.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424902.1
PEP-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013641300.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930806.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930478.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425055.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424967.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424940.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424952.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634992.1
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007424892.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634997.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007424894.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013634999.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424896.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424897.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930463.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755126.1
COORDINATES: similar to AA sequence:RefSeq:WP_020485770.1
COORDINATES: similar to AA sequence:RefSeq:WP_013641226.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469708.1
COORDINATES: protein motif:HMM:NF016330.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010189087.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013570706.1
COORDINATES: similar to AA sequence:RefSeq:WP_012778812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011508718.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327356.1
GO:0015074 - DNA integration [Evidence IEA]
phage integrase N-terminal SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014003087.1
COORDINATES: protein motif:HMM:NF033564.0
COORDINATES: similar to AA sequence:RefSeq:WP_013635068.1
COORDINATES: similar to AA sequence:RefSeq:WP_011511193.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930535.1
COORDINATES: similar to AA sequence:RefSeq:WP_013640609.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019223969.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012386244.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424813.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013635027.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007424811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950655.1
COORDINATES: similar to AA sequence:RefSeq:WP_007792578.1
COORDINATES: protein motif:HMM:NF016830.2
GO:0015288 - porin activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930484.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425107.1
COORDINATES: similar to AA sequence:RefSeq:WP_018268148.1
COORDINATES: similar to AA sequence:RefSeq:WP_017264315.1
filamentation induced by cAMP protein fic
COORDINATES: similar to AA sequence:RefSeq:WP_013635073.1
COORDINATES: protein motif:HMM:NF037521.2
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011930445.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011930444.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011114071.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004212689.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_011930831.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF014218.2
COORDINATES: similar to AA sequence:RefSeq:WP_014087604.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773518.1
COORDINATES: similar to AA sequence:RefSeq:WP_004939152.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_076612275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004527058.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014087607.1
COORDINATES: similar to AA sequence:RefSeq:WP_006204661.1
COORDINATES: similar to AA sequence:RefSeq:WP_008877185.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612253.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611716.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF021447.2
COORDINATES: similar to AA sequence:RefSeq:WP_007424918.1
COORDINATES: similar to AA sequence:RefSeq:WP_013635017.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930776.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003701838.1
COORDINATES: similar to AA sequence:RefSeq:WP_013641210.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199074.1
COORDINATES: similar to AA sequence:RefSeq:WP_003630649.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424916.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007424915.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011930439.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424913.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930438.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015923020.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011251563.1