Anaerolinea thermophila UNI-1, complete sequence.
Bacteria; Chloroflexota; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.
Whole genome sequence of Anaerolinea thermophila UNI-1
Submitted (08-DEC-2010) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, NITE Bioresource Information Center (NBIC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/
REFSEQ INFORMATION: The reference sequence is identical to\nAP012029.1.\n\n\nPlease visit our web site.\nURL:http://www.bio.nite.go.jp/\n\nDOGAN ; Database of Genomes Analyzed at NITE\nThe database contains genome sequence data, physical maps and the\ngenomic and proteomic data of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nGenome Coverage :: 16x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:06:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,203\nCDSs (total) :: 3,142\nGenes (coding) :: 3,123\nCDSs (with protein) :: 3,123\nGenes (RNA) :: 61\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 3 of 19\nPseudo Genes (incomplete) :: 16 of 19\nPseudo Genes (internal stop) :: 0 of 19\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF025864.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
PmeII family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024583.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF025084.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:TIGR02033.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF025309.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: protein motif:HMM:NF018696.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF015185.2
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF008121.0
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF013771.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF005592.0
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF017879.2
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558502.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037979.1
COORDINATES: protein motif:HMM:NF039823.1
COORDINATES: protein motif:HMM:NF019265.2
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF019298.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014850.2
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: protein motif:HMM:NF014690.2
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
ligand-binding sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF010167.0
GO:0015833 - peptide transport [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF024816.2
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF027585.2
COORDINATES: protein motif:HMM:NF009881.0
COORDINATES: protein motif:HMM:NF012521.2
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF027484.2
COORDINATES: protein motif:HMM:TIGR00762.1
COORDINATES: protein motif:HMM:TIGR00416.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF000594.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: protein motif:HMM:NF014381.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
COORDINATES: protein motif:HMM:NF014375.2
cobalamin B12-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:TIGR02174.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF011291.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013561202.1
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006055.0
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF009555.0
GO:0016787 - hydrolase activity [Evidence IEA]
YgeY family selenium metabolism-linked hydrolase
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: protein motif:HMM:NF009007.0
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF026853.2
MvaI/BcnI restriction endonuclease family protein
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: protein motif:HMM:NF004046.0
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014616.2
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:TIGR00615.1
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559314.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559310.1
dipeptide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF006765.0
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF006132.0
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_017978889.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558589.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF024853.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03716.1
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_012054698.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:TIGR03800.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: protein motif:HMM:NF040318.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
R3H domain-containing nucleic acid-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017638157.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_020368220.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002872.1
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016104.2
GO:0000009 - alpha-1,6-mannosyltransferase activity [Evidence IEA]; GO:0004376 - glycolipid mannosyltransferase activity [Evidence IEA]
GO:0006506 - GPI anchor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01796.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006421.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018543.2
COORDINATES: protein motif:HMM:TIGR00132.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:NF014716.2
aspartyl/glutamyl-tRNA amidotransferase subunit C
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF013323.2
3-oxoadipate--succinyl-CoA transferase subunit B
COORDINATES: protein motif:HMM:NF012398.2
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:TIGR00330.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: protein motif:HMM:NF022355.2
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00487.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016204.2
COORDINATES: protein motif:HMM:TIGR01953.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558970.1
COORDINATES: protein motif:HMM:NF014212.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR01188.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_001843924.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0089714 - UDP-N-acetyl-D-mannosamine dehydrogenase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
UDP-N-acetyl-D-mannosamine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015703970.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: protein motif:HMM:TIGR02753.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00678.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF024212.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02136.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_017789372.1
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:TIGR00641.1
COORDINATES: protein motif:HMM:TIGR03081.1
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: protein motif:HMM:TIGR02196.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561044.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF025432.2
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF012772.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013755.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF014560.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019632.2
ClbS/DfsB family four-helix bundle protein
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013558901.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: protein motif:HMM:NF013355.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02289.1
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF002068.0
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010078980.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00465.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002086.0
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012550.2
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF002458.0
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:TIGR00977.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00169.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF023096.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF040269.1
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_018286768.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00496.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:TIGR01063.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF015941.2
COORDINATES: protein motif:HMM:TIGR03594.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016816.2
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024819.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF018649.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF013799.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF024772.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015232.2
COORDINATES: protein motif:HMM:NF014845.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF019142.2
ubiquitin-like domain-containing protein
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:TIGR00158.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF024855.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: protein motif:HMM:NF019013.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015384397.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016424288.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00183.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF014019.2
COORDINATES: protein motif:HMM:NF019625.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF009498.0
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF011657.0
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: protein motif:HMM:TIGR00398.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016176834.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF015912.2
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013559818.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_003973712.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012707.2
basic amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013761.2
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006960.0
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF024834.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF040134.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293117.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF017920.2
COORDINATES: protein motif:HMM:NF024595.2
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF014869.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009598251.1
COORDINATES: protein motif:HMM:NF005507.0
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02175.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016636114.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015478452.1
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03847.1
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03618.1
PPOX class F420-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013561162.1
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF020553.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF008455.0
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF009006.0
GO:0050440 - 2-methylcitrate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006943.0
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0047547 - 2-methylcitrate dehydratase activity [Evidence IEA]
GO:0019679 - propionate metabolic process, methylcitrate cycle [Evidence IEA]
bifunctional 2-methylcitrate dehydratase/aconitate hydratase
COORDINATES: protein motif:HMM:NF003559.0
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF014624.2
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_013085328.1
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01930.1
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF021546.2
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: protein motif:HMM:TIGR02631.1
GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013206.2
gamma-glutamyltransferase family protein
COORDINATES: protein motif:HMM:NF001824.0
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0009381 - excinuclease ABC activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF003349.0
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014193.2
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:TIGR02866.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012422.2
helix-turn-helix transcriptional regulator
choice-of-anchor Q domain-containing protein
COORDINATES: protein motif:HMM:TIGR01211.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
COORDINATES: protein motif:HMM:NF012457.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558661.1
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004730348.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007936.0
ribose ABC transporter substrate-binding protein RbsB
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:NF013155.2
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559246.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF012906.2
COORDINATES: protein motif:HMM:NF004760.0
COORDINATES: protein motif:HMM:NF018275.2
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF013134.2
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_013559007.1
COORDINATES: protein motif:HMM:NF017999.2
COORDINATES: protein motif:HMM:NF013056.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558999.1
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:TIGR01195.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF015910.2
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF022834.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036536.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00566.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR00564.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009314.0
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF009243.0
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:NF009306.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF009163.0
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_000022439.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:TIGR03619.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
TIGR03619 family F420-dependent LLM class oxidoreductase
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF014021.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:NF039639.1
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
GO:0004518 - nuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF012434.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560416.1
COORDINATES: protein motif:HMM:NF017011.2
capsule polysaccharide biosynthesis family protein
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292049.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: protein motif:HMM:NF014409.2
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01254.1
thiamine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF021388.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF037269.2
COORDINATES: protein motif:HMM:NF012300.2
COORDINATES: protein motif:HMM:NF025690.2
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: protein motif:HMM:NF004384.0
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01446.1
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF013989.2
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF014165.2
COORDINATES: protein motif:HMM:NF014552.2
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF024675.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF015289.2
EutN/CcmL family microcompartment protein
COORDINATES: protein motif:HMM:NF011666.0
COORDINATES: similar to AA sequence:RefSeq:WP_001183618.1
ethanolamine utilization microcompartment protein EutM
COORDINATES: protein motif:HMM:NF018032.2
ethanolamine ammonia-lyase reactivating factor EutA
COORDINATES: protein motif:HMM:NF011649.1
COORDINATES: protein motif:HMM:NF003971.0
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011934.0
GO:0046336 - ethanolamine catabolic process [Evidence IEA]
ethanolamine utilization microcompartment protein EutL
COORDINATES: protein motif:HMM:NF018008.2
COORDINATES: protein motif:HMM:NF014033.2
COORDINATES: protein motif:HMM:NF011660.0
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF024787.2
HNH endonuclease domain-containing protein
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:TIGR01524.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01647.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: protein motif:HMM:NF014090.2
COORDINATES: protein motif:HMM:NF001923.0
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF033681.1
ExeM/NucH family extracellular endonuclease
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF013739.2
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF025887.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF017822.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559303.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559304.1
COORDINATES: protein motif:HMM:NF012739.2
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022137.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:NF013915.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
prolipoprotein diacylglyceryl transferase
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF024209.2
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_017953234.1
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF033504.1
GO:0050043 - lactate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014502.2
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04226.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0045184 - establishment of protein localization [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF013400.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560040.1
COORDINATES: protein motif:HMM:NF001490.0
COORDINATES: protein motif:HMM:NF012885.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01343.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290750.1
COORDINATES: protein motif:HMM:NF012407.2
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR00768.1
COORDINATES: protein motif:HMM:NF015764.2
COORDINATES: protein motif:HMM:NF013473.2
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: protein motif:HMM:TIGR01962.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF010120.0
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:TIGR01973.1
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF004537.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF004321.0
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF005141.0
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:TIGR01770.1
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:TIGR03570.1
GO:0016740 - transferase activity [Evidence IEA]
NeuD/PglB/VioB family sugar acetyltransferase
COORDINATES: protein motif:HMM:TIGR00567.1
COORDINATES: protein motif:HMM:NF012690.2
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:TIGR00832.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015678.2
COORDINATES: protein motif:HMM:NF019494.2
polyhydroxyalkanoate synthesis regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:TIGR01354.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01173.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF016221.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559671.1
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559192.1
COORDINATES: similar to AA sequence:RefSeq:WP_010744499.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_002341308.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558573.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558572.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: protein motif:HMM:NF013491.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF015552.2
C4-dicarboxylate transporter/malic acid transport family protein
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF025006.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:NF025734.2
COORDINATES: protein motif:HMM:NF036726.2
acyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF012367.2
COORDINATES: protein motif:HMM:NF026177.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF014728.2
SDR family NAD(P)-dependent oxidoreductase
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF006886.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015293283.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021903.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559368.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021221.2
type II CAAX endopeptidase family protein
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF024948.2
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003202249.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559677.1
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF010539.0
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290852.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01215.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:TIGR00464.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF007825.0
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006054.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: protein motif:HMM:NF012784.2
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_017944086.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
low molecular weight protein arginine phosphatase
COORDINATES: protein motif:HMM:NF001616.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018003268.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007526570.1
COORDINATES: similar to AA sequence:RefSeq:WP_010720460.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: protein motif:HMM:TIGR03953.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_004924105.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008707255.1
COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293501.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012741334.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590375.1
COORDINATES: protein motif:HMM:TIGR03635.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009607843.1
COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_017722933.1
COORDINATES: similar to AA sequence:RefSeq:WP_006784446.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229151.1
COORDINATES: similar to AA sequence:RefSeq:WP_002290455.1
COORDINATES: protein motif:HMM:TIGR01071.1
COORDINATES: protein motif:HMM:TIGR00967.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003128018.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00500.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039275.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004641037.1
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011921691.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016293478.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009305940.1
COORDINATES: protein motif:HMM:NF001099.0
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF004320.0
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF003501.0
COORDINATES: similar to AA sequence:RefSeq:WP_009567342.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_001040954.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: similar to AA sequence:RefSeq:WP_018287220.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:TIGR02857.1
GO:0055051 - ATP-binding cassette (ABC) transporter complex, integrated substrate binding [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0033230 - ABC-type cysteine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0033228 - cysteine export across plasma membrane [Evidence IEA]
thiol reductant ABC exporter subunit CydD
COORDINATES: protein motif:HMM:TIGR02868.1
thiol reductant ABC exporter subunit CydC
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: protein motif:HMM:NF006416.0
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04520.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015536.2
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02386.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:NF004044.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024092.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF024376.2
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: protein motif:HMM:NF015084.2
biotin/lipoate A/B protein ligase family protein
cyclic nucleotide-binding domain-containing protein
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF015052.2
glucodextranase DOMON-like domain-containing protein
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:NF006873.0
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: protein motif:HMM:NF018038.2
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013918.2
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: protein motif:HMM:TIGR02274.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:TIGR02024.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: protein motif:HMM:NF014626.2
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: protein motif:HMM:NF017078.2
COORDINATES: protein motif:HMM:NF014016.2
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016365.2
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF013319.2
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:NF013232.2
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF021134.2
COORDINATES: protein motif:HMM:NF012585.2
COORDINATES: protein motif:HMM:TIGR00167.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF013381.2
uroporphyrinogen decarboxylase family protein
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF022655.2
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01460.1
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF022702.2
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_011996181.1
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: protein motif:HMM:TIGR02082.1
GO:0008705 - methionine synthase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:TIGR03723.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: similar to AA sequence:RefSeq:WP_006904603.1
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: similar to AA sequence:RefSeq:WP_018287644.1
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558848.1
COORDINATES: protein motif:HMM:NF007128.0
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00407.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293323.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03640.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_016293321.1
COORDINATES: protein motif:HMM:TIGR02589.1
GO:0003674 - molecular_function [Evidence IEA]
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:TIGR01863.1
GO:0005575 - cellular_component [Evidence IEA]
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: protein motif:HMM:TIGR01876.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01587.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: protein motif:HMM:NF033580.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021483.2
COORDINATES: protein motif:HMM:NF013909.2
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: protein motif:HMM:NF003367.0
COORDINATES: protein motif:HMM:NF002325.0
GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
acetylornithine/succinylornithine family transaminase
COORDINATES: protein motif:HMM:NF010659.0
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013559251.1
COORDINATES: protein motif:HMM:TIGR01206.1
GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00838.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF001770.0
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013300.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559300.1
COORDINATES: protein motif:HMM:NF012780.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005745.0
bidirectional hydrogenase complex protein HoxU
COORDINATES: similar to AA sequence:RefSeq:WP_013559391.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_002485948.1
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF002211.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF002320.0
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291490.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00750.1
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:TIGR00640.1
COORDINATES: protein motif:HMM:NF014007.2
energy-coupling factor ABC transporter permease
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01976.1
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00417.1
COORDINATES: protein motif:HMM:NF014705.2
COORDINATES: protein motif:HMM:TIGR03330.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013801934.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290830.1
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF001753.0
Sir2 family NAD-dependent protein deacetylase
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:TIGR01993.1
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:TIGR00653.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015655.2
glutamine synthetase adenylyltransferase
COORDINATES: protein motif:HMM:NF014703.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00449.1
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF028425.2
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF008955.0
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00029.2
COORDINATES: similar to AA sequence:RefSeq:WP_006863552.1
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR01826.1
COORDINATES: protein motif:HMM:NF012428.2
acetyl ornithine aminotransferase family protein
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF008724.0
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF013843.2
COORDINATES: similar to AA sequence:RefSeq:WP_016293055.1
TIGR03905 family TSCPD domain-containing protein
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:NF039236.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF012705.2
phytoene/squalene synthase family protein
COORDINATES: protein motif:HMM:TIGR02734.1
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024490.2
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF005123.0
COORDINATES: protein motif:HMM:NF003154.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: protein motif:HMM:NF014948.2
L-fucose/L-arabinose isomerase family protein
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF001030.0
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF000711.0
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:TIGR00962.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01146.1
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: protein motif:HMM:NF009980.0
COORDINATES: protein motif:HMM:NF003989.0
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559921.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF009381.0
COORDINATES: protein motif:HMM:NF015597.2
COORDINATES: protein motif:HMM:NF004281.0
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: protein motif:HMM:TIGR03346.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF006426.0
bifunctional phosphoglucose/phosphomannose isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_000280860.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561054.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01828.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03182.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF006667.0
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF021492.2
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561389.1
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: protein motif:HMM:NF006053.0
COORDINATES: protein motif:HMM:NF005540.0
COORDINATES: protein motif:HMM:TIGR01915.1
COORDINATES: protein motif:HMM:TIGR01916.1
GO:0043773 - coenzyme F420-0 gamma-glutamyl ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: protein motif:HMM:TIGR01819.1
GO:0043743 - LPPG:FO 2-phospho-L-lactate transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03552.1
GO:0043814 - phospholactate guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:TIGR03309.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF006820.0
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF028222.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: protein motif:HMM:NF014877.2
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF007980.0
GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF014750.2
aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014653.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF000586.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF013123.2
DPP IV N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024767.2
COORDINATES: protein motif:HMM:NF012509.2
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017634.2
COORDINATES: protein motif:HMM:NF009676.0
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023218.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013356.2
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015400.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015818.2
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:NF012982.2
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF024918.2
COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559801.1
COORDINATES: protein motif:HMM:NF018884.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:TIGR00928.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: protein motif:HMM:TIGR00378.1
GO:0015368 - calcium:cation antiporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01163.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013026.2
COORDINATES: protein motif:HMM:TIGR03599.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561243.1
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: protein motif:HMM:TIGR01407.1
GO:0004527 - exonuclease activity [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF002049.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF005932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290306.1
COORDINATES: protein motif:HMM:NF014665.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF018816.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01786
cyclic di-GMP riboswitch class II; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF001236.0
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03662.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291381.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00478.1
COORDINATES: protein motif:HMM:NF008978.0
decaprenyl-phosphate phosphoribosyltransferase
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040647.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002326.0
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:NF001263.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024483.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290938.1
COORDINATES: similar to AA sequence:RefSeq:WP_018286751.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014458490.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00936.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_000715321.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012356.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
MiaB/RimO family radical SAM methylthiotransferase
COORDINATES: protein motif:HMM:NF012531.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013436.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017132437.1
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF015284.2
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF014678.2
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: protein motif:HMM:NF018565.2
COORDINATES: protein motif:HMM:NF022657.2
COORDINATES: protein motif:HMM:NF024747.2
4Fe-4S single cluster domain-containing protein
COORDINATES: protein motif:HMM:NF024298.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012204529.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_114679478.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:TIGR00691.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF019199.2
COORDINATES: protein motif:HMM:NF024241.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1
COORDINATES: protein motif:HMM:NF001696.0
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: protein motif:HMM:NF003346.0
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_013560458.1
COORDINATES: protein motif:HMM:NF002073.0
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF016827.2
COORDINATES: protein motif:HMM:NF003739.0
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: protein motif:HMM:NF006756.0
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF040905.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF040907.1
COORDINATES: protein motif:HMM:NF025807.2
COORDINATES: protein motif:HMM:TIGR04317.1
tungsten cofactor oxidoreductase radical SAM maturase
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004718.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF015690.2
COORDINATES: protein motif:HMM:NF005975.0
enoyl-[acyl-carrier-protein] reductase FabL
COORDINATES: protein motif:HMM:NF004720.0
COORDINATES: protein motif:HMM:NF017984.2
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: protein motif:HMM:NF023746.2
COORDINATES: protein motif:HMM:TIGR01326.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023184.2
nitrous oxide-stimulated promoter family protein
COORDINATES: protein motif:HMM:TIGR02814.1
PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein
COORDINATES: protein motif:HMM:NF036823.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: protein motif:HMM:NF013256.2
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014026.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024602.2
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: protein motif:HMM:NF025065.2
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018753.2
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF024977.2
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:NF005722.0
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02124.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF013315.2
COORDINATES: protein motif:HMM:NF025178.2
non-heme iron oxygenase ferredoxin subunit
COORDINATES: protein motif:HMM:NF013738.2
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_020359689.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_016623216.1
COORDINATES: similar to AA sequence:RefSeq:WP_002503432.1
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:NF026214.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF007080.0
bifunctional transaldolase/phosoglucose isomerase
COORDINATES: protein motif:HMM:NF004051.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00232.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001986.0
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01885.1
GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF038402.1
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF004739.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000236330.1
COORDINATES: similar to AA sequence:RefSeq:WP_006680773.1
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:TIGR00177.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF020917.2
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560365.1
COORDINATES: protein motif:HMM:NF017539.2
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF021384.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF006871.0
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003564285.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015535.2
COORDINATES: protein motif:HMM:TIGR01104.1
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF001908.0
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018877.2
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: protein motif:HMM:NF024923.2
COORDINATES: protein motif:HMM:NF019845.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_007264062.1
COORDINATES: protein motif:HMM:NF012475.2
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF025150.2
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013141351.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_018286740.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00080.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:TIGR00649.1
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:NF005560.0
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000667286.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03831.1
COORDINATES: similar to AA sequence:RefSeq:WP_008770038.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019428.2
TadE/TadG family type IV pilus assembly protein
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF015344.2
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01189.1
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF024645.2
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:NF027651.2
COORDINATES: protein motif:HMM:NF015085.2
COORDINATES: protein motif:HMM:NF014417.2
transcription termination/antitermination NusG family protein
COORDINATES: protein motif:HMM:NF024594.2
COORDINATES: protein motif:HMM:NF022481.2
COORDINATES: protein motif:HMM:NF012975.2
ribonuclease catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560239.1
COORDINATES: protein motif:HMM:NF005034.0
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF004018.0
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF015081.2
COORDINATES: protein motif:HMM:NF024107.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292883.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012914214.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00113.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: protein motif:HMM:NF006050.0
COORDINATES: protein motif:HMM:TIGR01240.1
GO:0004163 - diphosphomevalonate decarboxylase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF024876.2
COORDINATES: protein motif:HMM:NF003673.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR01656.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF002048.0
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008687.0
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013561001.1
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013368.2
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:TIGR00517.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: similar to AA sequence:RefSeq:WP_019902207.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013560086.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559799.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292962.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: protein motif:HMM:NF001810.0
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF014119.2
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013143.2
COORDINATES: similar to AA sequence:RefSeq:WP_010081311.1
COORDINATES: similar to AA sequence:RefSeq:WP_013352894.1
COORDINATES: protein motif:HMM:TIGR00217.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02095.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:TIGR01581.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:TIGR00412.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF019291.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: protein motif:HMM:NF025454.2
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560776.1
COORDINATES: protein motif:HMM:NF016024.2
SWIM zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF025725.2
COORDINATES: protein motif:HMM:NF025088.2
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: similar to AA sequence:RefSeq:WP_000897307.1
COORDINATES: protein motif:HMM:NF041265.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560786.1
peptidoglycan recognition family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560791.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560793.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560794.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560795.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560796.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560548.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560549.1
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:TIGR01552.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560805.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560809.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560810.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560811.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560813.1
COORDINATES: protein motif:HMM:NF025107.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560823.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560825.1
COORDINATES: protein motif:HMM:NF025890.2
COORDINATES: protein motif:HMM:NF015237.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF014215.2
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:TIGR00072.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF012566.2
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF005012.1
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: protein motif:HMM:TIGR01974.1
COORDINATES: protein motif:HMM:NF024641.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004616.0
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009241008.1
COORDINATES: protein motif:HMM:NF013307.2
putative succinate dehydrogenase membrane subunit
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: protein motif:HMM:TIGR04083.1
TIGR04083 family peptide-modifying radical SAM enzyme
COORDINATES: protein motif:HMM:NF020376.2
COORDINATES: protein motif:HMM:NF013052.2
COORDINATES: protein motif:HMM:NF003767.0
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: protein motif:HMM:NF013122.2
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF022427.2
COORDINATES: protein motif:HMM:TIGR03666.1
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: similar to AA sequence:RefSeq:WP_005705387.1
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014448.2
molybdopterin converting factor subunit 1
COORDINATES: similar to AA sequence:RefSeq:WP_001612668.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: protein motif:HMM:TIGR03960.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: protein motif:HMM:NF016142.2
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013561035.1
COORDINATES: similar to AA sequence:RefSeq:WP_002886926.1
COORDINATES: protein motif:HMM:NF015962.2
COORDINATES: protein motif:HMM:NF025698.2
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: protein motif:HMM:NF013791.2
COORDINATES: protein motif:HMM:NF014386.2
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004490.0
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_002474682.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:TIGR03943.1
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:TIGR00619.1
COORDINATES: protein motif:HMM:NF003814.0
COORDINATES: protein motif:HMM:TIGR00724.1
biotin-dependent carboxyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00370.1
COORDINATES: protein motif:HMM:TIGR00299.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: similar to AA sequence:RefSeq:WP_018281842.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:TIGR00445.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:TIGR01133.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002528.0
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00065.1
COORDINATES: protein motif:HMM:TIGR00244.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF037564.2
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: protein motif:HMM:TIGR00414.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: protein motif:HMM:NF024660.2
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:NF013654.2
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011968657.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013168.2
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:TIGR00007.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF002111.0
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016932.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560518.1
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560538.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560540.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560541.1
COORDINATES: protein motif:HMM:NF012783.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560542.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560543.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560546.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560547.1
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013560560.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560562.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560563.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560567.1
COORDINATES: protein motif:HMM:NF023069.2
DnaA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560584.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560586.1
COORDINATES: protein motif:HMM:NF021577.2
COORDINATES: protein motif:HMM:NF021162.2
COORDINATES: protein motif:HMM:TIGR02578.1
type III-A CRISPR-associated protein Cas10/Csm1
COORDINATES: protein motif:HMM:NF015695.2
type III-A CRISPR-associated protein Csm2
COORDINATES: protein motif:HMM:TIGR02582.1
type III-A CRISPR-associated RAMP protein Csm3
COORDINATES: protein motif:HMM:TIGR01903.1
type III-A CRISPR-associated RAMP protein Csm4
COORDINATES: protein motif:HMM:TIGR01899.1
type III-A CRISPR-associated RAMP protein Csm5
COORDINATES: protein motif:HMM:NF021006.2
TIGR02221 family CRISPR-associated protein
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561218.1
COORDINATES: protein motif:HMM:TIGR01877.1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
COORDINATES: protein motif:HMM:TIGR00696.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF028199.2
COORDINATES: protein motif:HMM:NF014051.2
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:NF013296.2
GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019444.2
kanamycin nucleotidyltransferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF004012.0
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:TIGR00092.1
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF013382.2
ubiquinone/menaquinone biosynthesis methyltransferase
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: protein motif:HMM:NF015851.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF025875.2
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF014414.2
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:TIGR01224.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025181.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560925.1
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: protein motif:HMM:TIGR01312.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: protein motif:HMM:TIGR01990.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00468.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:TIGR03820.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF008035.0
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF001413.0
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00061.1
COORDINATES: similar to AA sequence:RefSeq:WP_002513859.1
COORDINATES: similar to AA sequence:RefSeq:WP_003151132.1
COORDINATES: protein motif:HMM:NF015102.2
DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00516.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:TIGR00795.1
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: protein motif:HMM:NF019155.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF003792.0
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014522.2
COORDINATES: protein motif:HMM:NF024848.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000848.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01744.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015534.2
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024754.2
aminoglycoside phosphotransferase family protein
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF014763.2
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02009.1
beta-phosphoglucomutase family hydrolase
COORDINATES: protein motif:HMM:NF036531.2
COORDINATES: protein motif:HMM:NF025011.2
helicase-associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF020084.2
FIST N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:NF014156.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:NF037526.2
COORDINATES: protein motif:HMM:NF014074.2
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF009544.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017793.2
COORDINATES: protein motif:HMM:NF020396.2
COORDINATES: protein motif:HMM:NF033564.0
COORDINATES: protein motif:HMM:NF025180.2
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002139.0
COORDINATES: protein motif:HMM:NF014711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013278859.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: protein motif:HMM:NF039504.1
COORDINATES: protein motif:HMM:NF028476.2
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: protein motif:HMM:NF020872.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560660.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_015576101.1
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_020055847.1
COORDINATES: similar to AA sequence:RefSeq:WP_019456581.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00104.1
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:NF014057.2
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF022072.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013559827.1
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: protein motif:HMM:NF024851.2
COORDINATES: protein motif:HMM:NF025255.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF006846.0
GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010963775.1
COORDINATES: protein motif:HMM:NF016334.2
COORDINATES: similar to AA sequence:RefSeq:WP_001735792.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:TIGR00663.1
COORDINATES: protein motif:HMM:NF015251.2
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014250.2
COORDINATES: protein motif:HMM:NF024083.2
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF012945.2
COORDINATES: protein motif:HMM:TIGR03843.1
succinate dehydrogenase membrane subunit
putative succinate dehydrogenase cytochrome b subunit
COORDINATES: protein motif:HMM:TIGR00384.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016292161.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025066.2
COORDINATES: protein motif:HMM:TIGR03342.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:NF021436.2
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: protein motif:HMM:NF014312.2
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: protein motif:HMM:NF017085.2
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_016291710.1
COORDINATES: similar to AA sequence:RefSeq:WP_002302962.1
COORDINATES: protein motif:HMM:NF025330.2
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: protein motif:HMM:NF016262.2
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: protein motif:HMM:TIGR00088.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF022100.2
COORDINATES: protein motif:HMM:NF022279.2
COORDINATES: protein motif:HMM:TIGR00030.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558549.1
COORDINATES: protein motif:HMM:NF005741.0
dihydroorotate dehydrogenase-like protein
COORDINATES: protein motif:HMM:TIGR02176.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF016147.2
COORDINATES: protein motif:HMM:TIGR00372.1
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02593.1
COORDINATES: protein motif:HMM:TIGR01875.1
type I-B CRISPR-associated protein Cas7/Cst2/DevR
COORDINATES: similar to AA sequence:RefSeq:WP_013560837.1
COORDINATES: protein motif:HMM:TIGR01898.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR01881.1
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:NF021236.2
type III-B CRISPR module-associated protein Cmr3
COORDINATES: protein motif:HMM:TIGR02577.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: protein motif:HMM:TIGR01894.1
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: protein motif:HMM:NF013438.2
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: similar to AA sequence:RefSeq:WP_003409385.1
COORDINATES: similar to AA sequence:RefSeq:WP_000093041.1
COORDINATES: protein motif:HMM:NF018190.2
COORDINATES: protein motif:HMM:NF017880.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559945.1
COORDINATES: protein motif:HMM:NF014171.2
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF003716.0
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF013920.2
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF012336.2
Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF003274.0
COORDINATES: protein motif:HMM:TIGR00532.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF020584.2
NgoMIV family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF017807.2
COORDINATES: protein motif:HMM:NF011964.0
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: protein motif:HMM:NF002223.0
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013109.2
COORDINATES: protein motif:HMM:NF012895.2
deoxyuridine 5'-triphosphate nucleotidohydrolase
COORDINATES: protein motif:HMM:NF002772.0
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014062.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03153.1
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:NF014398.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: similar to AA sequence:RefSeq:WP_011881614.1
COORDINATES: protein motif:HMM:NF021525.2
COORDINATES: protein motif:HMM:NF017368.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_020801803.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001764656.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF039337.1
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF003806.0
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022700.2
COORDINATES: protein motif:HMM:NF013618.2
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561426.1
COORDINATES: protein motif:HMM:TIGR04337.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF014571.2
GO:0046353 - aminoglycoside 3-N-acetyltransferase activity [Evidence IEA]
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF013469.2
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF039189.1
COORDINATES: protein motif:HMM:NF001756.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020318.2
COORDINATES: similar to AA sequence:RefSeq:WP_015261693.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04060.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039496.1
COORDINATES: protein motif:HMM:NF023144.2
maleylpyruvate isomerase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:NF005394.0
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF011325.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559840.1
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF026288.2
COORDINATES: protein motif:HMM:TIGR00593.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: protein motif:HMM:NF022596.2
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006385.0
coproporphyrinogen III oxidase family protein
pre-peptidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:NF039426.1
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
alpha amylase N-terminal ig-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561331.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290567.1
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02607.1
COORDINATES: similar to AA sequence:RefSeq:WP_005936145.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF013237.2
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF036421.2
COORDINATES: protein motif:HMM:NF016991.2
GO:0019068 - virion assembly [Evidence IEA]
choice-of-anchor R domain-containing protein
COORDINATES: protein motif:HMM:NF013286.2
COORDINATES: protein motif:HMM:NF008102.0
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: protein motif:HMM:TIGR00722.1
COORDINATES: protein motif:HMM:NF017494.2
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005328724.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013085.2
COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF022337.2
COORDINATES: protein motif:HMM:TIGR00688.1
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF001965.0
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF016013.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR01187.1
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: protein motif:HMM:TIGR00133.1
COORDINATES: protein motif:HMM:NF004751.0
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
1,4-dihydroxy-2-naphthoate polyprenyltransferase
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00079.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
COORDINATES: protein motif:HMM:NF037099.2
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF003820.0
GO:0016153 - urocanate hydratase activity [Evidence IEA]