Tachyglossus aculeatus isolate mTacAcu1 chromosome X2, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome X2, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052100.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052100.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027599.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 32032621
topology: linear
so has quality: SO_0000987
location: 1..32032621
location: region:1-32032621:1
RO_0002162: 9261

NC_052100
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32032621:1
position: 32032621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32032621:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: X2
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

LOC119949681
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20905..27238)
location: region:20905-27238:-1
so has part: feature:20905-27238:-1:exon
subclass of: SO_0000010

119949681
type: Gene
SIO_000068: ncbigene

position:20905:-1
position: 20905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27238:-1
position: 27238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20905-27238:-1:exon

LOC119949681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949681
product: somatotropin-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771591.1
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(20905..21353,23008..23013,24084..24236,25185..25283,25922..26070,27113..27238))
location: region:20905-27238:-1
so has part: feature:27113-27238:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25283:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23008-23013:-1:exon
so has part: feature:20905-21353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27238:-1:exon

position:27113:-1
position: 27113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

position:25922:-1
position: 25922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26070:-1
position: 26070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25283:-1:exon

position:25185:-1
position: 25185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25283:-1
position: 25283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

position:24084:-1
position: 24084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24236:-1
position: 24236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23008-23013:-1:exon

position:23008:-1
position: 23008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23013:-1
position: 23013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20905-21353:-1:exon

position:21353:-1
position: 21353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949681
product: somatotropin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771589.1
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(20905..21353,24084..24236,25185..25289,25922..26070,27113..27238))
location: region:20905-27238:-1
so has part: feature:27113-27238:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:20905-21353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

position:25289:-1
position: 25289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20905-21353:-1:exon

LOC119949681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949681
product: somatotropin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771588.1
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(20905..21353,23008..23013,24084..24236,25185..25289,25922..26070,27113..27238))
location: region:20905-27238:-1
so has part: feature:27113-27238:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23008-23013:-1:exon
so has part: feature:20905-21353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23008-23013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20905-21353:-1:exon

LOC119949681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatotropin-like isoform X3
translation: MEFLVLLAFPMVACGCFPGHRSDLSSGLLALTLTTLPRQAETELFNDMFSFMWHVASMLSFASEDIYDQYRYHLSTMKKIVPPECVTAGLPHPRTVDEVSKTPVPQLMLSALDLVQAWITASEDLPLPGLVPHRVFNYYSLLFLLEQGIQSYVKRKEETCDLPTYKRFYLNDDTVHLQVANSDLLYCLKTDMLRVLTYLRLSYCATTDMC
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(21189..21353,23008..23013,24084..24236,25185..25283,25922..26070,27113..27173))
location: region:21189-27173:-1
so has part: feature:27113-27173:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25283:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23008-23013:-1:exon
so has part: feature:21189-21353:-1:exon

XP_038627519.1
type: Protein
SIO_000068: ncbiprotein

position:21189:-1
position: 21189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27173:-1
position: 27173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23008-23013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21189-21353:-1:exon

LOC119949681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatotropin-like isoform X2
translation: MEFLVLLAFPMVACGCFPGHRSDLSSGLLALTLTTLPRQAETELFNDMFSFMWHVASMLSFASEDIYDQYMQRYHLSTMKKIVPPECVTAGLPHPRTVDEVSKTPVPQLMLSALDLVQAWITASEDLPLPGLVPHRVFNYYSLLFLLEQGIQSYVKEETCDLPTYKRFYLNDDTVHLQVANSDLLYCLKTDMLRVLTYLRLSYCATTDMC
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(21189..21353,24084..24236,25185..25289,25922..26070,27113..27173))
location: region:21189-27173:-1
so has part: feature:27113-27173:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:21189-21353:-1:exon

XP_038627517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21189-21353:-1:exon

LOC119949681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatotropin-like isoform X1
translation: MEFLVLLAFPMVACGCFPGHRSDLSSGLLALTLTTLPRQAETELFNDMFSFMWHVASMLSFASEDIYDQYMQRYHLSTMKKIVPPECVTAGLPHPRTVDEVSKTPVPQLMLSALDLVQAWITASEDLPLPGLVPHRVFNYYSLLFLLEQGIQSYVKRKEETCDLPTYKRFYLNDDTVHLQVANSDLLYCLKTDMLRVLTYLRLSYCATTDMC
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(21189..21353,23008..23013,24084..24236,25185..25289,25922..26070,27113..27173))
location: region:21189-27173:-1
so has part: feature:27113-27173:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23008-23013:-1:exon
so has part: feature:21189-21353:-1:exon

XP_038627516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23008-23013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21189-21353:-1:exon

LOC119949681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949681
product: somatotropin-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771592.1
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(23585..23754,24084..24236,25185..25289,25922..26070,27113..27238))
location: region:23585-27238:-1
so has part: feature:27113-27238:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23585-23754:-1:exon

position:23585:-1
position: 23585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23585-23754:-1:exon

position:23754:-1
position: 23754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119949681 isoform X4
translation: MEFLVLLAFPMVACGCFPGHRSDLSSGLLALTLTTLPRQAETELFNDMFSFMWHVASMLSFASEDIYDQYMQRYHLSTMKKIVPPECVTAGLPHPRTVDEVSKTPVPQLMLSALDLVQAWITASEDLPLPGLVPHRVFNYYSLLFLLEQGIQSYVKPRLGQPGRPSGSFFLGYSGPTCPPPPPTLLTLFSTQRSSQNNPADIG
SIO_010081: LOC119949681
subclass of: SO_0000673
so part of: LOC119949681
location: complement(join(23611..23754,24084..24236,25185..25289,25922..26070,27113..27173))
location: region:23611-27173:-1
so has part: feature:27113-27173:-1:exon
so has part: feature:25922-26070:-1:exon
so has part: feature:25185-25289:-1:exon
so has part: feature:24084-24236:-1:exon
so has part: feature:23611-23754:-1:exon

XP_038627520.1
type: Protein
SIO_000068: ncbiprotein

position:23611:-1
position: 23611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25922-26070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25185-25289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24084-24236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23611-23754:-1:exon

LOC119949096
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36556..43906)
location: region:36556-43906:-1
so has part: feature:36556-43906:-1:exon
subclass of: SO_0000010

119949096
type: Gene
SIO_000068: ncbigene

position:36556:-1
position: 36556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43906:-1
position: 43906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36556-43906:-1:exon

LOC119949096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949096
product: somatotropin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038770569.1
SIO_010081: LOC119949096
subclass of: SO_0000673
so part of: LOC119949096
location: complement(join(36556..36676,36925..37059,38459..38611,39886..39990,42416..42570,43750..43906))
location: region:36556-43906:-1
so has part: feature:43750-43906:-1:exon
so has part: feature:42416-42570:-1:exon
so has part: feature:39886-39990:-1:exon
so has part: feature:38459-38611:-1:exon
so has part: feature:36925-37059:-1:exon
so has part: feature:36556-36676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43750-43906:-1:exon

position:43750:-1
position: 43750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42416-42570:-1:exon

position:42416:-1
position: 42416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42570:-1
position: 42570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39886-39990:-1:exon

position:39886:-1
position: 39886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39990:-1
position: 39990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38459-38611:-1:exon

position:38459:-1
position: 38459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38611:-1
position: 38611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36925-37059:-1:exon

position:36925:-1
position: 36925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37059:-1
position: 37059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36556-36676:-1:exon

position:36676:-1
position: 36676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949096
product: somatotropin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038770568.1
SIO_010081: LOC119949096
subclass of: SO_0000673
so part of: LOC119949096
location: complement(join(36556..37059,38459..38611,39886..39990,42416..42570,43750..43905))
location: region:36556-43905:-1
so has part: feature:43750-43905:-1:exon
so has part: feature:42416-42570:-1:exon
so has part: feature:39886-39990:-1:exon
so has part: feature:38459-38611:-1:exon
so has part: feature:36556-37059:-1:exon

position:43905:-1
position: 43905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43750-43905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42416-42570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39886-39990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38459-38611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36556-37059:-1:exon

LOC119949096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119949096 isoform X2
translation: MEFLMFLAFPMMASGCFLGQRSSLSLGIFALTLSTLPWPGETTAVSETQLLNNLWKMGTTLKGKAKMVYNQYAERHSLREKIQKTYPFCNSAYLPHPQSREVIRAKPPAELLKFAAELIRAWVPATMHLGINGPEINPHERLYNFLWEAYELIILYFKEILEQPFLPDDISYNYGHFVLKEDTHEEQLKNAIKLHCFLRDMKKL
SIO_010081: LOC119949096
subclass of: SO_0000673
so part of: LOC119949096
location: complement(join(36671..36676,36925..37059,38459..38611,39886..39990,42416..42570,43750..43810))
location: region:36671-43810:-1
so has part: feature:43750-43810:-1:exon
so has part: feature:42416-42570:-1:exon
so has part: feature:39886-39990:-1:exon
so has part: feature:38459-38611:-1:exon
so has part: feature:36925-37059:-1:exon
so has part: feature:36671-36676:-1:exon

XP_038626497.1
type: Protein
SIO_000068: ncbiprotein

position:36671:-1
position: 36671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43810:-1
position: 43810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43750-43810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42416-42570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39886-39990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38459-38611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36925-37059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36671-36676:-1:exon

LOC119949096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatotropin-1-like isoform X1
translation: MEFLMFLAFPMMASGCFLGQRSSLSLGIFALTLSTLPWPGETTAVSETQLLNNLWKMGTTLKGKAKMVYNQYAERHSLREKIQKTYPFCNSAYLPHPQSREVIRAKPPAELLKFAAELIRAWVPATMHLGINGPEINPHERLYNFLWEAYELIILYFKEILEQPFLPDDISYNYGHFVLKEDTHEEQLKNAIKLHCFLRDMKKVEEYLFTAYC
SIO_010081: LOC119949096
subclass of: SO_0000673
so part of: LOC119949096
location: complement(join(36892..37059,38459..38611,39886..39990,42416..42570,43750..43810))
location: region:36892-43810:-1
so has part: feature:43750-43810:-1:exon
so has part: feature:42416-42570:-1:exon
so has part: feature:39886-39990:-1:exon
so has part: feature:38459-38611:-1:exon
so has part: feature:36892-37059:-1:exon

XP_038626496.1
type: Protein
SIO_000068: ncbiprotein

position:36892:-1
position: 36892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43750-43810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42416-42570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39886-39990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38459-38611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36892-37059:-1:exon

LOC119949373
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50212..60005)
location: region:50212-60005:-1
so has part: feature:50212-60005:-1:exon
subclass of: SO_0000010

119949373
type: Gene
SIO_000068: ncbigene

position:50212:-1
position: 50212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60005:-1
position: 60005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50212-60005:-1:exon

LOC119949373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949373
product: L-gulonolactone oxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771107.1
SIO_010081: LOC119949373
subclass of: SO_0000673
so part of: LOC119949373
location: complement(join(50212..50614,51175..51265,52936..53100,53587..53736,54415..54491,55161..55268,55858..56043,56849..56939,57826..57920,58849..58974,59412..59519,59808..60005))
location: region:50212-60005:-1
so has part: feature:59808-60005:-1:exon
so has part: feature:59412-59519:-1:exon
so has part: feature:58849-58974:-1:exon
so has part: feature:57826-57920:-1:exon
so has part: feature:56849-56939:-1:exon
so has part: feature:55858-56043:-1:exon
so has part: feature:55161-55268:-1:exon
so has part: feature:54415-54491:-1:exon
so has part: feature:53587-53736:-1:exon
so has part: feature:52936-53100:-1:exon
so has part: feature:51175-51265:-1:exon
so has part: feature:50212-50614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59808-60005:-1:exon

position:59808:-1
position: 59808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59412-59519:-1:exon

position:59412:-1
position: 59412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59519:-1
position: 59519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58849-58974:-1:exon

position:58849:-1
position: 58849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58974:-1
position: 58974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57826-57920:-1:exon

position:57826:-1
position: 57826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57920:-1
position: 57920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56849-56939:-1:exon

position:56849:-1
position: 56849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56939:-1
position: 56939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:55858-56043:-1:exon

position:55858:-1
position: 55858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56043:-1
position: 56043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55161-55268:-1:exon

position:55161:-1
position: 55161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55268:-1
position: 55268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54415-54491:-1:exon

position:54415:-1
position: 54415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54491:-1
position: 54491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:53587-53736:-1:exon

position:53587:-1
position: 53587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53736:-1
position: 53736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:52936-53100:-1:exon

position:52936:-1
position: 52936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53100:-1
position: 53100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:51175-51265:-1:exon

position:51175:-1
position: 51175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51265:-1
position: 51265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:50212-50614:-1:exon

position:50614:-1
position: 50614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-gulonolactone oxidase-like
translation: MAQAHGHGGVQFQNWARTYGCCPELFFQPTSAEEIREILELARQRNKKVKVVGGGHSPSDIACTDGFMIQMGKMNRVLKVDKEKRQVTVEAGILLSDLNTELDKHGLALSNLGAVSEVAAAGVIGTGTHNTGIQHGILATQVVSLTLLTATGETLECSESSHAELFQAVRVHLGCLGVVLTLTLQCVLTFHLREISFPSTLQDVLDNLESHLQQSEYFRFLWFPHSENVSVIYQDRTDRPASSSSSWFWDYGVGYYLLECLLWFSTFLPFLVPWINRFFFRLLFAHRAEHTDLSHRVFNYECRFKQHVQDWAIPIGKTKEALLELKAALERDPKVVAHYPVEVRFARGDPILLSPCFQRDSCYMNIIMYRPYGKDVPRLHYWLAYERIMKKVGGRPHWAKAHTCTRADFEIMYPAFRQFCSIREKLDPTGMFLNSYLEKVFH
SIO_010081: LOC119949373
subclass of: SO_0000673
so part of: LOC119949373
location: complement(join(50486..50614,51175..51265,52936..53100,53587..53736,54415..54491,55161..55268,55858..56043,56849..56939,57826..57920,58849..58974,59412..59519,59808..59810))
location: region:50486-59810:-1
so has part: feature:59808-59810:-1:exon
so has part: feature:59412-59519:-1:exon
so has part: feature:58849-58974:-1:exon
so has part: feature:57826-57920:-1:exon
so has part: feature:56849-56939:-1:exon
so has part: feature:55858-56043:-1:exon
so has part: feature:55161-55268:-1:exon
so has part: feature:54415-54491:-1:exon
so has part: feature:53587-53736:-1:exon
so has part: feature:52936-53100:-1:exon
so has part: feature:51175-51265:-1:exon
so has part: feature:50486-50614:-1:exon

XP_038627035.1
type: Protein
SIO_000068: ncbiprotein

position:50486:-1
position: 50486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59810:-1
position: 59810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59808-59810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59412-59519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58849-58974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57826-57920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56849-56939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55858-56043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55161-55268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54415-54491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53587-53736:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52936-53100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51175-51265:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:50486-50614:-1:exon

EPHX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EPHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65308..81013)
location: region:65308-81013:-1
so has part: feature:65308-81013:-1:exon
subclass of: SO_0000010

119949274
type: Gene
SIO_000068: ncbigene

position:65308:-1
position: 65308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81013:-1
position: 81013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65308-81013:-1:exon

EPHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EPHX2
product: epoxide hydrolase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038770893.1
SIO_010081: EPHX2
subclass of: SO_0000673
so part of: EPHX2
location: complement(join(65308..65637,65890..65948,66254..66334,67013..67082,67452..67554,67907..67940,68455..68529,69346..69457,70980..71065,72380..72406,72983..73017,73704..73782,73955..74050,74464..74538,74776..74898,75348..75538,76014..76173,76805..76889,80735..80835))
location: region:65308-80835:-1
so has part: feature:80735-80835:-1:exon
so has part: feature:76805-76889:-1:exon
so has part: feature:76014-76173:-1:exon
so has part: feature:75348-75538:-1:exon
so has part: feature:74776-74898:-1:exon
so has part: feature:74464-74538:-1:exon
so has part: feature:73955-74050:-1:exon
so has part: feature:73704-73782:-1:exon
so has part: feature:72983-73017:-1:exon
so has part: feature:72380-72406:-1:exon
so has part: feature:70980-71065:-1:exon
so has part: feature:69346-69457:-1:exon
so has part: feature:68455-68529:-1:exon
so has part: feature:67907-67940:-1:exon
so has part: feature:67452-67554:-1:exon
so has part: feature:67013-67082:-1:exon
so has part: feature:66254-66334:-1:exon
so has part: feature:65890-65948:-1:exon
so has part: feature:65308-65637:-1:exon

position:80835:-1
position: 80835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80735-80835:-1:exon

position:80735:-1
position: 80735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76805-76889:-1:exon

position:76805:-1
position: 76805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76889:-1
position: 76889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76014-76173:-1:exon

position:76014:-1
position: 76014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76173:-1
position: 76173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:75348-75538:-1:exon

position:75348:-1
position: 75348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75538:-1
position: 75538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74776-74898:-1:exon

position:74776:-1
position: 74776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74898:-1
position: 74898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74464-74538:-1:exon

position:74464:-1
position: 74464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74538:-1
position: 74538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:73955-74050:-1:exon

position:73955:-1
position: 73955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74050:-1
position: 74050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73704-73782:-1:exon

position:73704:-1
position: 73704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73782:-1
position: 73782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:72983-73017:-1:exon

position:72983:-1
position: 72983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73017:-1
position: 73017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:72380-72406:-1:exon

position:72380:-1
position: 72380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72406:-1
position: 72406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:70980-71065:-1:exon

position:70980:-1
position: 70980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71065:-1
position: 71065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:69346-69457:-1:exon

position:69346:-1
position: 69346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69457:-1
position: 69457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68455-68529:-1:exon

position:68455:-1
position: 68455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68529:-1
position: 68529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:67907-67940:-1:exon

position:67907:-1
position: 67907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67940:-1
position: 67940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:67452-67554:-1:exon

position:67452:-1
position: 67452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67554:-1
position: 67554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:67013-67082:-1:exon

position:67013:-1
position: 67013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67082:-1
position: 67082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:66254-66334:-1:exon

position:66254:-1
position: 66254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66334:-1
position: 66334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:65890-65948:-1:exon

position:65890:-1
position: 65890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65948:-1
position: 65948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:65308-65637:-1:exon

position:65637:-1
position: 65637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EPHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional epoxide hydrolase 2 isoform X1
translation: MALRVALFELGGVLLGPSPREVFSRTEEALALPSGFFGKVTTQGGQEGPFARLLRGELTLGQAVPLLDEACRDNSAASGFRLPTPFSIRRVFDEMRSGAEINIPMLQAAIALRNRGWKTCILSNTWVDDSPERSQQAQISCALAKHFDLRVESCRVGVAKPDPAIYLLALEALGARPHEAVCLDDTEANLRAALELGLVTIQAQNTAAALEKLEQITGMQPLGPKETLLTACRPDSVAHGQVSVKPGVQLHFVEAGTGPAVCLCHGFPESWFSWRYQIPALADAGFRVIALDMKGYGDSSAPQAMEEYSQEEMCKEAVTFLDKLGISQAVFIGHDWGGMFVWNMALFYPERVRAVASLNTPFMPADPSVPTMEKIRAMPVFDYQLYFQEPGVAEAELEADLSRTLKLLIRASDEKNFVTTCEVQKRGGLLVGMPESPPTSRILKEEDLRVYVQQFEKSGFRGPLNWYRNVERNWRWSCIAAGRKIMVPALMITAGKDPVLTPHMSRNMEEWVPQLKRSHIEECGHWTQMDRPTELNQILTKWLKQLPASVAKL
SIO_010081: EPHX2
subclass of: SO_0000673
so part of: EPHX2
location: complement(join(65568..65637,65890..65948,66254..66334,67013..67082,67452..67554,67907..67940,68455..68529,69346..69457,70980..71065,72380..72406,72983..73017,73704..73782,73955..74050,74464..74538,74776..74898,75348..75538,76014..76173,76805..76889,80735..80835))
location: region:65568-80835:-1
so has part: feature:80735-80835:-1:exon
so has part: feature:76805-76889:-1:exon
so has part: feature:76014-76173:-1:exon
so has part: feature:75348-75538:-1:exon
so has part: feature:74776-74898:-1:exon
so has part: feature:74464-74538:-1:exon
so has part: feature:73955-74050:-1:exon
so has part: feature:73704-73782:-1:exon
so has part: feature:72983-73017:-1:exon
so has part: feature:72380-72406:-1:exon
so has part: feature:70980-71065:-1:exon
so has part: feature:69346-69457:-1:exon
so has part: feature:68455-68529:-1:exon
so has part: feature:67907-67940:-1:exon
so has part: feature:67452-67554:-1:exon
so has part: feature:67013-67082:-1:exon
so has part: feature:66254-66334:-1:exon
so has part: feature:65890-65948:-1:exon
so has part: feature:65568-65637:-1:exon

XP_038626821.1
type: Protein
SIO_000068: ncbiprotein

position:65568:-1
position: 65568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80735-80835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76805-76889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76014-76173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75348-75538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74776-74898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74464-74538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73955-74050:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73704-73782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72983-73017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72380-72406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70980-71065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69346-69457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68455-68529:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67907-67940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67452-67554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67013-67082:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66254-66334:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65890-65948:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65568-65637:-1:exon

EPHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EPHX2
product: epoxide hydrolase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038770894.1
SIO_010081: EPHX2
subclass of: SO_0000673
so part of: EPHX2
location: complement(join(66341..66882,67013..67082,67452..67554,67907..67940,68455..68529,69346..69457,70980..71065,72380..72406,72983..73017,73704..73782,73955..74050,74464..74538,74776..74898,75348..75538,76014..76173,76805..76889,80735..81013))
location: region:66341-81013:-1
so has part: feature:80735-81013:-1:exon
so has part: feature:76805-76889:-1:exon
so has part: feature:76014-76173:-1:exon
so has part: feature:75348-75538:-1:exon
so has part: feature:74776-74898:-1:exon
so has part: feature:74464-74538:-1:exon
so has part: feature:73955-74050:-1:exon
so has part: feature:73704-73782:-1:exon
so has part: feature:72983-73017:-1:exon
so has part: feature:72380-72406:-1:exon
so has part: feature:70980-71065:-1:exon
so has part: feature:69346-69457:-1:exon
so has part: feature:68455-68529:-1:exon
so has part: feature:67907-67940:-1:exon
so has part: feature:67452-67554:-1:exon
so has part: feature:67013-67082:-1:exon
so has part: feature:66341-66882:-1:exon

position:66341:-1
position: 66341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80735-81013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76805-76889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76014-76173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75348-75538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74776-74898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74464-74538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73955-74050:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73704-73782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72983-73017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72380-72406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70980-71065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69346-69457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68455-68529:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67907-67940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67452-67554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67013-67082:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66341-66882:-1:exon

position:66882:-1
position: 66882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EPHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional epoxide hydrolase 2 isoform X2
translation: MALRVALFELGGVLLGPSPREVFSRTEEALALPSGFFGKVTTQGGQEGPFARLLRGELTLGQAVPLLDEACRDNSAASGFRLPTPFSIRRVFDEMRSGAEINIPMLQAAIALRNRGWKTCILSNTWVDDSPERSQQAQISCALAKHFDLRVESCRVGVAKPDPAIYLLALEALGARPHEAVCLDDTEANLRAALELGLVTIQAQNTAAALEKLEQITGMQPLGPKETLLTACRPDSVAHGQVSVKPGVQLHFVEAGTGPAVCLCHGFPESWFSWRYQIPALADAGFRVIALDMKGYGDSSAPQAMEEYSQEEMCKEAVTFLDKLGISQAVFIGHDWGGMFVWNMALFYPERVRAVASLNTPFMPADPSVPTMEKIRAMPVFDYQLYFQEPGVAEAELEADLSRTLKLLIRASDEKNFVTTCEVQKRGGLLVGMPESPPTSRILKEEDLRVYVQQFEKSGFRGPLNWYRNVERNWRWSCIAAGRKVIPEVERPMERPPVQLGTLSRAPSAAVMG
SIO_010081: EPHX2
subclass of: SO_0000673
so part of: EPHX2
location: complement(join(66793..66882,67013..67082,67452..67554,67907..67940,68455..68529,69346..69457,70980..71065,72380..72406,72983..73017,73704..73782,73955..74050,74464..74538,74776..74898,75348..75538,76014..76173,76805..76889,80735..80835))
location: region:66793-80835:-1
so has part: feature:80735-80835:-1:exon
so has part: feature:76805-76889:-1:exon
so has part: feature:76014-76173:-1:exon
so has part: feature:75348-75538:-1:exon
so has part: feature:74776-74898:-1:exon
so has part: feature:74464-74538:-1:exon
so has part: feature:73955-74050:-1:exon
so has part: feature:73704-73782:-1:exon
so has part: feature:72983-73017:-1:exon
so has part: feature:72380-72406:-1:exon
so has part: feature:70980-71065:-1:exon
so has part: feature:69346-69457:-1:exon
so has part: feature:68455-68529:-1:exon
so has part: feature:67907-67940:-1:exon
so has part: feature:67452-67554:-1:exon
so has part: feature:67013-67082:-1:exon
so has part: feature:66793-66882:-1:exon

XP_038626822.1
type: Protein
SIO_000068: ncbiprotein

position:66793:-1
position: 66793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80735-80835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76805-76889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76014-76173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75348-75538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74776-74898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74464-74538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:73955-74050:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73704-73782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:72983-73017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72380-72406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70980-71065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69346-69457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68455-68529:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67907-67940:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67452-67554:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67013-67082:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66793-66882:-1:exon

CHRNA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CHRNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86141..93879
location: region:86141-93879:1
so has part: feature:86141-93879:1:exon
subclass of: SO_0000010

119949292
type: Gene
SIO_000068: ncbigene

position:86141:1
position: 86141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93879:1
position: 93879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86141-93879:1:exon

CHRNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHRNA2
product: cholinergic receptor nicotinic alpha 2 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038770936.1
SIO_010081: CHRNA2
subclass of: SO_0000673
so part of: CHRNA2
location: join(86141..86324,87152..87369,88986..89155,89375..89419,90181..90290,91120..92092,92661..93879)
location: region:86141-93879:1
so has part: feature:86141-86324:1:exon
so has part: feature:87152-87369:1:exon
so has part: feature:88986-89155:1:exon
so has part: feature:89375-89419:1:exon
so has part: feature:90181-90290:1:exon
so has part: feature:91120-92092:1:exon
so has part: feature:92661-93879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86141-86324:1:exon

position:86324:1
position: 86324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87152-87369:1:exon

position:87152:1
position: 87152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87369:1
position: 87369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88986-89155:1:exon

position:88986:1
position: 88986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89155:1
position: 89155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89375-89419:1:exon

position:89375:1
position: 89375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89419:1
position: 89419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90181-90290:1:exon

position:90181:1
position: 90181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90290:1
position: 90290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91120-92092:1:exon

position:91120:1
position: 91120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92092:1
position: 92092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:92661-93879:1:exon

position:92661:1
position: 92661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHRNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-2 isoform X1
translation: MVLRTYFSLPPPLAIHSVMAACLPRMDTKDDLLPAKDGCPGRVWTGPTLPPLQATRFTAPRMPLAGRIVLWGLFLLSSGAVQGESHIPTESRTHAEDRLFKHLFQGYNRWVRPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWQDHKLRWDPSAFDNVTTLRVPADMIWIPDIVLYNNADGEFAVRHMTKAQLSASGTVRWAPPAIYKSSCSIDVTHFPFDQQNCKMKFGSWTYDKAKIDLELLQQTVELHQFWESGEWAIVRAVGTYNTKKYDCCSEIYPDITYCFRIRRLPLFYTINLITPCLLLSTLTVLVFYLPSACGEKITLCISVLLSLTVFLLLITEIIPSTSLVVPLISEYLLFTMIFVTLSIGITVFVLNVHHRAPGTHTMPHWVREVFLGRAPEGLLLRRPRSTPQLLTAPGMGAGASHYWLDTRVDDEEEDEEAWREPLHRHWAHPGTGAPPGSGAPQPITSLPLSSSILEALAGVQYIADHLKAEDADSTVKEDWKYVAMVIDRIFLWLFVVICLFGTIGLFVPPLLAGLI
SIO_010081: CHRNA2
subclass of: SO_0000673
so part of: CHRNA2
location: join(86308..86324,87152..87369,88986..89155,89375..89419,90181..90290,91120..92092,92661..92786)
location: region:86308-92786:1
so has part: feature:86308-86324:1:exon
so has part: feature:87152-87369:1:exon
so has part: feature:88986-89155:1:exon
so has part: feature:89375-89419:1:exon
so has part: feature:90181-90290:1:exon
so has part: feature:91120-92092:1:exon
so has part: feature:92661-92786:1:exon

XP_038626864.1
type: Protein
SIO_000068: ncbiprotein

position:86308:1
position: 86308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92786:1
position: 92786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86308-86324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87152-87369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88986-89155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89375-89419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90181-90290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91120-92092:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92661-92786:1:exon

CHRNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHRNA2
product: cholinergic receptor nicotinic alpha 2 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770937.1
SIO_010081: CHRNA2
subclass of: SO_0000673
so part of: CHRNA2
location: join(90219..90290,91256..92092,92661..93879)
location: region:90219-93879:1
so has part: feature:90219-90290:1:exon
so has part: feature:91256-92092:1:exon
so has part: feature:92661-93879:1:exon

position:90219:1
position: 90219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90219-90290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91256-92092:1:exon

position:91256:1
position: 91256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92661-93879:1:exon

CHRNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHRNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-2 isoform X2
translation: MKFGSWTYDKAKIDLELLQQTVELHQFWESGEWAIVRAVGTYNTKKYDCCSEIYPDITYCFRIRRLPLFYTINLITPCLLLSTLTVLVFYLPSACGEKITLCISVLLSLTVFLLLITEIIPSTSLVVPLISEYLLFTMIFVTLSIGITVFVLNVHHRAPGTHTMPHWVREVFLGRAPEGLLLRRPRSTPQLLTAPGMGAGASHYWLDTRVDDEEEDEEAWREPLHRHWAHPGTGAPPGSGAPQPITSLPLSSSILEALAGVQYIADHLKAEDADSTVKEDWKYVAMVIDRIFLWLFVVICLFGTIGLFVPPLLAGLI
SIO_010081: CHRNA2
subclass of: SO_0000673
so part of: CHRNA2
location: join(91265..92092,92661..92786)
location: region:91265-92786:1
so has part: feature:91265-92092:1:exon
so has part: feature:92661-92786:1:exon

XP_038626865.1
type: Protein
SIO_000068: ncbiprotein

position:91265:1
position: 91265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91265-92092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92661-92786:1:exon

PTK2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PTK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(93648..130387)
location: region:93648-130387:-1
so has part: feature:93648-130387:-1:exon
subclass of: SO_0000010

119949291
type: Gene
SIO_000068: ncbigene

position:93648:-1
position: 93648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130387:-1
position: 130387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93648-130387:-1:exon

PTK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PTK2B
product: protein tyrosine kinase 2 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770935.1
SIO_010081: PTK2B
subclass of: SO_0000673
so part of: PTK2B
location: complement(join(93648..94548,94715..94795,95704..95841,96195..96241,96981..97005,97373..97408,98125..98271,100480..100548,100751..100856,101077..101281,102140..102229,102325..102425,103088..103203,103359..103459,104263..104347,104557..104654,105094..105144,105432..105469,105763..105802,106006..106123,106241..106342,106563..106637,107083..107223,107383..107437,107637..107699,109178..109257,109355..109442,109640..109818,111334..111572,130204..130387))
location: region:93648-130387:-1
so has part: feature:130204-130387:-1:exon
so has part: feature:111334-111572:-1:exon
so has part: feature:109640-109818:-1:exon
so has part: feature:109355-109442:-1:exon
so has part: feature:109178-109257:-1:exon
so has part: feature:107637-107699:-1:exon
so has part: feature:107383-107437:-1:exon
so has part: feature:107083-107223:-1:exon
so has part: feature:106563-106637:-1:exon
so has part: feature:106241-106342:-1:exon
so has part: feature:106006-106123:-1:exon
so has part: feature:105763-105802:-1:exon
so has part: feature:105432-105469:-1:exon
so has part: feature:105094-105144:-1:exon
so has part: feature:104557-104654:-1:exon
so has part: feature:104263-104347:-1:exon
so has part: feature:103359-103459:-1:exon
so has part: feature:103088-103203:-1:exon
so has part: feature:102325-102425:-1:exon
so has part: feature:102140-102229:-1:exon
so has part: feature:101077-101281:-1:exon
so has part: feature:100751-100856:-1:exon
so has part: feature:100480-100548:-1:exon
so has part: feature:98125-98271:-1:exon
so has part: feature:97373-97408:-1:exon
so has part: feature:96981-97005:-1:exon
so has part: feature:96195-96241:-1:exon
so has part: feature:95704-95841:-1:exon
so has part: feature:94715-94795:-1:exon
so has part: feature:93648-94548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130204-130387:-1:exon

position:130204:-1
position: 130204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111334-111572:-1:exon

position:111334:-1
position: 111334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111572:-1
position: 111572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109640-109818:-1:exon

position:109640:-1
position: 109640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109818:-1
position: 109818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109355-109442:-1:exon

position:109355:-1
position: 109355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109442:-1
position: 109442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109178-109257:-1:exon

position:109178:-1
position: 109178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109257:-1
position: 109257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107637-107699:-1:exon

position:107637:-1
position: 107637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107699:-1
position: 107699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107383-107437:-1:exon

position:107383:-1
position: 107383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107437:-1
position: 107437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107083-107223:-1:exon

position:107083:-1
position: 107083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107223:-1
position: 107223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106563-106637:-1:exon

position:106563:-1
position: 106563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106637:-1
position: 106637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:106241-106342:-1:exon

position:106241:-1
position: 106241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106342:-1
position: 106342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106006-106123:-1:exon

position:106006:-1
position: 106006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106123:-1
position: 106123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:105763-105802:-1:exon

position:105763:-1
position: 105763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105802:-1
position: 105802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:105432-105469:-1:exon

position:105432:-1
position: 105432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105469:-1
position: 105469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:105094-105144:-1:exon

position:105094:-1
position: 105094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105144:-1
position: 105144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:104557-104654:-1:exon

position:104557:-1
position: 104557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104654:-1
position: 104654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:104263-104347:-1:exon

position:104263:-1
position: 104263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104347:-1
position: 104347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:103359-103459:-1:exon

position:103359:-1
position: 103359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103459:-1
position: 103459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:103088-103203:-1:exon

position:103088:-1
position: 103088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103203:-1
position: 103203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:102325-102425:-1:exon

position:102325:-1
position: 102325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102425:-1
position: 102425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:102140-102229:-1:exon

position:102140:-1
position: 102140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102229:-1
position: 102229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:101077-101281:-1:exon

position:101077:-1
position: 101077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101281:-1
position: 101281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:100751-100856:-1:exon

position:100751:-1
position: 100751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100856:-1
position: 100856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:100480-100548:-1:exon

position:100480:-1
position: 100480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100548:-1
position: 100548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:98125-98271:-1:exon

position:98125:-1
position: 98125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98271:-1
position: 98271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:97373-97408:-1:exon

position:97373:-1
position: 97373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97408:-1
position: 97408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:96981-97005:-1:exon

position:96981:-1
position: 96981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97005:-1
position: 97005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:96195-96241:-1:exon

position:96195:-1
position: 96195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96241:-1
position: 96241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:95704-95841:-1:exon

position:95704:-1
position: 95704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95841:-1
position: 95841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:94715-94795:-1:exon

position:94715:-1
position: 94715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94795:-1
position: 94795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:93648-94548:-1:exon

position:94548:-1
position: 94548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PTK2B
product: protein tyrosine kinase 2 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770934.1
SIO_010081: PTK2B
subclass of: SO_0000673
so part of: PTK2B
location: complement(join(93648..94548,94715..94795,95704..95841,96195..96241,96981..97005,97373..97408,98125..98271,99596..99721,100480..100548,100751..100856,101077..101281,102140..102229,102325..102425,103088..103203,103359..103459,104263..104347,104557..104654,105094..105144,105432..105469,105763..105802,106006..106123,106241..106342,106563..106637,107083..107223,107383..107437,107637..107699,109178..109257,109355..109442,109640..109818,111334..111572,130204..130386))
location: region:93648-130386:-1
so has part: feature:130204-130386:-1:exon
so has part: feature:111334-111572:-1:exon
so has part: feature:109640-109818:-1:exon
so has part: feature:109355-109442:-1:exon
so has part: feature:109178-109257:-1:exon
so has part: feature:107637-107699:-1:exon
so has part: feature:107383-107437:-1:exon
so has part: feature:107083-107223:-1:exon
so has part: feature:106563-106637:-1:exon
so has part: feature:106241-106342:-1:exon
so has part: feature:106006-106123:-1:exon
so has part: feature:105763-105802:-1:exon
so has part: feature:105432-105469:-1:exon
so has part: feature:105094-105144:-1:exon
so has part: feature:104557-104654:-1:exon
so has part: feature:104263-104347:-1:exon
so has part: feature:103359-103459:-1:exon
so has part: feature:103088-103203:-1:exon
so has part: feature:102325-102425:-1:exon
so has part: feature:102140-102229:-1:exon
so has part: feature:101077-101281:-1:exon
so has part: feature:100751-100856:-1:exon
so has part: feature:100480-100548:-1:exon
so has part: feature:99596-99721:-1:exon
so has part: feature:98125-98271:-1:exon
so has part: feature:97373-97408:-1:exon
so has part: feature:96981-97005:-1:exon
so has part: feature:96195-96241:-1:exon
so has part: feature:95704-95841:-1:exon
so has part: feature:94715-94795:-1:exon
so has part: feature:93648-94548:-1:exon

position:130386:-1
position: 130386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130204-130386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111334-111572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109640-109818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109355-109442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109178-109257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107637-107699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107383-107437:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107083-107223:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106563-106637:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106241-106342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106006-106123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105763-105802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105432-105469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105094-105144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104557-104654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104263-104347:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103359-103459:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103088-103203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102325-102425:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:102140-102229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:101077-101281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:100751-100856:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:100480-100548:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:99596-99721:-1:exon

position:99596:-1
position: 99596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99721:-1
position: 99721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:98125-98271:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:97373-97408:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96981-97005:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:96195-96241:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:95704-95841:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:94715-94795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:93648-94548:-1:exon

PTK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PTK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-tyrosine kinase 2-beta isoform X2
translation: MSGVSEPLSRARAGSLRPPEAPPELMVPVPADVEQKEVRILKVCFYSNSFNPGKNFKLVKCTVHTQVREIIASILLSGRIGPDVQLLQCYGLRLKHVKSDEIHWLHPLMTVGEVQEQYQCLHLEAEWRYDLQIRYLPEGFLEQLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFYKDMPHNALDKKSNFELLEKEVGLELFFPKQMQDNLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFASIDQETYRCELIQGWNITVDLVIGPKGIRQMTSQDNKSTCLAEFHQIKSIRCTPKVEGTALLQLSIVGTPQSLSIKTSSLAEAENMADLIDGYCRLQCQIEGTLIIRPQKNGEKRSSLPQIPTLDRRSQLSESCSIESDIYAEIPDEALKRLSGVQYNVGREDVVLGRILGEGFFGEVYEGVYRNSKGEHIHVAVKTCKEDCAPDNKEKFMREAVLMKNLDHPHIVKLIGLIEEEPTWIIMELYPFGELGHYLEQNKSSLKVPTLILYSLQICKAMAYLEGLNCVHRDIAVRNVLVAAMDCVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDGCPPILYTLMTRCWDYGPRDRPRFTELVCSLSDIYKLEKDIAKEQERNRYRPPKIMEPSLYQEPPPKPSRPKCKPPLPQANLLTPKLQFQEEDFIQPGSREEAQQLWEAERTKMRQLLECQQKQMVEDNRWLRQEEKSLDPTVYANDQSPVTPEKESGYMEFTGPPQKPPRMGAQSIHPTANLDRTDDMVYVNVMELVKAVLQLKNQLGQLPPENYVLVVKNVGLTLRKLIGSVDAILPTLPLSARPEIEGTQKLLNKDLAELISKMRLAQQNAVTSLSEQCKRQMLAASHTLAVDAKNLLDAVDQAKVLGQTQQSSAH
SIO_010081: PTK2B
subclass of: SO_0000673
so part of: PTK2B
location: complement(join(94333..94548,94715..94795,95704..95841,96195..96241,96981..97005,97373..97408,98125..98271,100480..100548,100751..100856,101077..101281,102140..102229,102325..102425,103088..103203,103359..103459,104263..104347,104557..104654,105094..105144,105432..105469,105763..105802,106006..106123,106241..106342,106563..106637,107083..107223,107383..107437,107637..107699,109178..109257,109355..109442,109640..109818,111334..111537))
location: region:94333-111537:-1
so has part: feature:111334-111537:-1:exon
so has part: feature:109640-109818:-1:exon
so has part: feature:109355-109442:-1:exon
so has part: feature:109178-109257:-1:exon
so has part: feature:107637-107699:-1:exon
so has part: feature:107383-107437:-1:exon
so has part: feature:107083-107223:-1:exon
so has part: feature:106563-106637:-1:exon
so has part: feature:106241-106342:-1:exon
so has part: feature:106006-106123:-1:exon
so has part: feature:105763-105802:-1:exon
so has part: feature:105432-105469:-1:exon
so has part: feature:105094-105144:-1:exon
so has part: feature:104557-104654:-1:exon
so has part: feature:104263-104347:-1:exon
so has part: feature:103359-103459:-1:exon
so has part: feature:103088-103203:-1:exon
so has part: feature:102325-102425:-1:exon
so has part: feature:102140-102229:-1:exon
so has part: feature:101077-101281:-1:exon
so has part: feature:100751-100856:-1:exon
so has part: feature:100480-100548:-1:exon
so has part: feature:98125-98271:-1:exon
so has part: feature:97373-97408:-1:exon
so has part: feature:96981-97005:-1:exon
so has part: feature:96195-96241:-1:exon
so has part: feature:95704-95841:-1:exon
so has part: feature:94715-94795:-1:exon
so has part: feature:94333-94548:-1:exon

XP_038626863.1
type: Protein
SIO_000068: ncbiprotein

position:94333:-1
position: 94333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111537:-1
position: 111537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111334-111537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109640-109818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109355-109442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109178-109257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107637-107699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107383-107437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107083-107223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106563-106637:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106241-106342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106006-106123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105763-105802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105432-105469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105094-105144:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104557-104654:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104263-104347:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103359-103459:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103088-103203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102325-102425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102140-102229:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:101077-101281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:100751-100856:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:100480-100548:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:98125-98271:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:97373-97408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:96981-97005:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96195-96241:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:95704-95841:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:94715-94795:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:94333-94548:-1:exon

PTK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PTK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-tyrosine kinase 2-beta isoform X1
translation: MSGVSEPLSRARAGSLRPPEAPPELMVPVPADVEQKEVRILKVCFYSNSFNPGKNFKLVKCTVHTQVREIIASILLSGRIGPDVQLLQCYGLRLKHVKSDEIHWLHPLMTVGEVQEQYQCLHLEAEWRYDLQIRYLPEGFLEQLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFYKDMPHNALDKKSNFELLEKEVGLELFFPKQMQDNLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFASIDQETYRCELIQGWNITVDLVIGPKGIRQMTSQDNKSTCLAEFHQIKSIRCTPKVEGTALLQLSIVGTPQSLSIKTSSLAEAENMADLIDGYCRLQCQIEGTLIIRPQKNGEKRSSLPQIPTLDRRSQLSESCSIESDIYAEIPDEALKRLSGVQYNVGREDVVLGRILGEGFFGEVYEGVYRNSKGEHIHVAVKTCKEDCAPDNKEKFMREAVLMKNLDHPHIVKLIGLIEEEPTWIIMELYPFGELGHYLEQNKSSLKVPTLILYSLQICKAMAYLEGLNCVHRDIAVRNVLVAAMDCVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDGCPPILYTLMTRCWDYGPRDRPRFTELVCSLSDIYKLEKDIAKEQERNRYRPPKIMEPSLYQEPPPKPSRPKCKPPLPQANLLTPKLQFQVPEGLCASSPTLTSPMEYPLPADSLHTPPLQRHAVFKRHSMREEDFIQPGSREEAQQLWEAERTKMRQLLECQQKQMVEDNRWLRQEEKSLDPTVYANDQSPVTPEKESGYMEFTGPPQKPPRMGAQSIHPTANLDRTDDMVYVNVMELVKAVLQLKNQLGQLPPENYVLVVKNVGLTLRKLIGSVDAILPTLPLSARPEIEGTQKLLNKDLAELISKMRLAQQNAVTSLSEQCKRQMLAASHTLAVDAKNLLDAVDQAKVLGQTQQSSAH
SIO_010081: PTK2B
subclass of: SO_0000673
so part of: PTK2B
location: complement(join(94333..94548,94715..94795,95704..95841,96195..96241,96981..97005,97373..97408,98125..98271,99596..99721,100480..100548,100751..100856,101077..101281,102140..102229,102325..102425,103088..103203,103359..103459,104263..104347,104557..104654,105094..105144,105432..105469,105763..105802,106006..106123,106241..106342,106563..106637,107083..107223,107383..107437,107637..107699,109178..109257,109355..109442,109640..109818,111334..111537))
location: region:94333-111537:-1
so has part: feature:111334-111537:-1:exon
so has part: feature:109640-109818:-1:exon
so has part: feature:109355-109442:-1:exon
so has part: feature:109178-109257:-1:exon
so has part: feature:107637-107699:-1:exon
so has part: feature:107383-107437:-1:exon
so has part: feature:107083-107223:-1:exon
so has part: feature:106563-106637:-1:exon
so has part: feature:106241-106342:-1:exon
so has part: feature:106006-106123:-1:exon
so has part: feature:105763-105802:-1:exon
so has part: feature:105432-105469:-1:exon
so has part: feature:105094-105144:-1:exon
so has part: feature:104557-104654:-1:exon
so has part: feature:104263-104347:-1:exon
so has part: feature:103359-103459:-1:exon
so has part: feature:103088-103203:-1:exon
so has part: feature:102325-102425:-1:exon
so has part: feature:102140-102229:-1:exon
so has part: feature:101077-101281:-1:exon
so has part: feature:100751-100856:-1:exon
so has part: feature:100480-100548:-1:exon
so has part: feature:99596-99721:-1:exon
so has part: feature:98125-98271:-1:exon
so has part: feature:97373-97408:-1:exon
so has part: feature:96981-97005:-1:exon
so has part: feature:96195-96241:-1:exon
so has part: feature:95704-95841:-1:exon
so has part: feature:94715-94795:-1:exon
so has part: feature:94333-94548:-1:exon

XP_038626862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111334-111537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109640-109818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109355-109442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109178-109257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107637-107699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107383-107437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107083-107223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106563-106637:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106241-106342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106006-106123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105763-105802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105432-105469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105094-105144:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104557-104654:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104263-104347:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103359-103459:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103088-103203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102325-102425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102140-102229:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:101077-101281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:100751-100856:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:100480-100548:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:99596-99721:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:98125-98271:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:97373-97408:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96981-97005:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96195-96241:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:95704-95841:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:94715-94795:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:94333-94548:-1:exon

TRIM35
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRIM35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134777..140411
location: region:134777-140411:1
so has part: feature:134777-140411:1:exon
subclass of: SO_0000010

119949342
type: Gene
SIO_000068: ncbigene

position:134777:1
position: 134777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140411:1
position: 140411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134777-140411:1:exon

TRIM35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TRIM35
product: tripartite motif containing 35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771041.1
SIO_010081: TRIM35
subclass of: SO_0000673
so part of: TRIM35
location: join(134777..135282,137852..137947,138188..138418,138826..138848,139002..139120,139771..140411)
location: region:134777-140411:1
so has part: feature:134777-135282:1:exon
so has part: feature:137852-137947:1:exon
so has part: feature:138188-138418:1:exon
so has part: feature:138826-138848:1:exon
so has part: feature:139002-139120:1:exon
so has part: feature:139771-140411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134777-135282:1:exon

position:135282:1
position: 135282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137852-137947:1:exon

position:137852:1
position: 137852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137947:1
position: 137947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138188-138418:1:exon

position:138188:1
position: 138188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138418:1
position: 138418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138826-138848:1:exon

position:138826:1
position: 138826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138848:1
position: 138848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:139002-139120:1:exon

position:139002:1
position: 139002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139120:1
position: 139120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:139771-140411:1:exon

position:139771:1
position: 139771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TRIM35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 35
translation: MDLEPGSPAPPCPSPAASAALKEELLCAICYDPFRDAVTLRCGHNFCRGCVSRCWALRGPPACPVCKERASPAGLRPNHTLNNLVDKLLSQEAEGARRAGAGTGAGTGSRRHSGLCRLHRAPLSVFCLDDKELLCCACQGDPRHRGHRLQPVEGTARDYRAKCRNMEHCLREKVKEFRTVRRSYESIVKHNQVEAAWLEDRIRQEFEKLREFLGLEEQAALAAVAEEKAQKQHRAEEKIKQLEEEAEAVALEIKRLQAEMGEDDVSFLMKHKSRKRRLTCTAEPEPVQPGLLIDLSQALDSLQFRVWKKMLNIVEAVPFSFDPNTAGGWLSVSDSLTAVTNQGYRVPVENPERFSSAPCLLGSRVLAHGAHTWEVEVGTLPSWRVGVTRAVPGARPLQSTAHDARAGFWFVARARGLEGDQLVASEPAAASPLCLQLPRRLRVELECEDGELSFYDAERRRHLYTFHASFGPVRPYFYLGGTCALAAPEPLRLCPLRIQVREELEA
SIO_010081: TRIM35
subclass of: SO_0000673
so part of: TRIM35
location: join(134803..135282,137852..137947,138188..138418,138826..138848,139002..139120,139771..140342)
location: region:134803-140342:1
so has part: feature:134803-135282:1:exon
so has part: feature:137852-137947:1:exon
so has part: feature:138188-138418:1:exon
so has part: feature:138826-138848:1:exon
so has part: feature:139002-139120:1:exon
so has part: feature:139771-140342:1:exon

XP_038626969.1
type: Protein
SIO_000068: ncbiprotein

position:134803:1
position: 134803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140342:1
position: 140342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134803-135282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137852-137947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138188-138418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138826-138848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139002-139120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139771-140342:1:exon

STMN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: STMN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143575..150646
location: region:143575-150646:1
so has part: feature:143575-150646:1:exon
subclass of: SO_0000010

119949433
type: Gene
SIO_000068: ncbigene

position:143575:1
position: 143575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150646:1
position: 150646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143575-150646:1:exon

STMN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: STMN4
product: stathmin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038771208.1
SIO_010081: STMN4
subclass of: SO_0000673
so part of: STMN4
location: join(143575..143627,147256..147335,147720..147815,148976..149184,149560..149751,150052..150105,150383..150646)
location: region:143575-150646:1
so has part: feature:143575-143627:1:exon
so has part: feature:147256-147335:1:exon
so has part: feature:147720-147815:1:exon
so has part: feature:148976-149184:1:exon
so has part: feature:149560-149751:1:exon
so has part: feature:150052-150105:1:exon
so has part: feature:150383-150646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143575-143627:1:exon

position:143627:1
position: 143627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147256-147335:1:exon

position:147256:1
position: 147256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147335:1
position: 147335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147720-147815:1:exon

position:147720:1
position: 147720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147815:1
position: 147815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148976-149184:1:exon

position:148976:1
position: 148976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149184:1
position: 149184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149560-149751:1:exon

position:149560:1
position: 149560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149751:1
position: 149751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150052-150105:1:exon

position:150052:1
position: 150052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150105:1
position: 150105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150383-150646:1:exon

position:150383:1
position: 150383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STMN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: STMN4
product: stathmin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771207.1
SIO_010081: STMN4
subclass of: SO_0000673
so part of: STMN4
location: join(143575..143627,147256..147335,147720..147815,148976..149184,149560..149751,150383..150646)
location: region:143575-150646:1
so has part: feature:143575-143627:1:exon
so has part: feature:147256-147335:1:exon
so has part: feature:147720-147815:1:exon
so has part: feature:148976-149184:1:exon
so has part: feature:149560-149751:1:exon
so has part: feature:150383-150646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143575-143627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147256-147335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147720-147815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148976-149184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149560-149751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150383-150646:1:exon

STMN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: STMN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin-4 isoform X1
translation: MTLAAYKEKMKELPLVSLFCSCFLADPLSKAAYKQEADTVDLAWCVIPDMEVIELNKRASGESFEVILKPPSSDGVPEFYASVPRRRDPSLEEIQKKLEAAEERRKGQEAELLKQLAGKREHEREVLQKAIEDNNNFIRAAQQRLAHRMETNKENREAHLAAMLERLQEKDKRAEEVRKNKELKEEASR
SIO_010081: STMN4
subclass of: SO_0000673
so part of: STMN4
location: join(147323..147335,147720..147815,148976..149184,149560..149751,150383..150442)
location: region:147323-150442:1
so has part: feature:147323-147335:1:exon
so has part: feature:147720-147815:1:exon
so has part: feature:148976-149184:1:exon
so has part: feature:149560-149751:1:exon
so has part: feature:150383-150442:1:exon

XP_038627135.1
type: Protein
SIO_000068: ncbiprotein

position:147323:1
position: 147323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150442:1
position: 150442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147323-147335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147720-147815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148976-149184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149560-149751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150383-150442:1:exon

STMN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: STMN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin-4 isoform X2
translation: MTLAAYKEKMKELPLVSLFCSCFLADPLSKAAYKQEADTVDLAWCVIPDMEVIELNKRASGESFEVILKPPSSDGVPEFYASVPRRRDPSLEEIQKKLEAAEERRKGQEAELLKQLAGKREHEREVLQKAIEDNNNFIRAAQQRLAHRMETNKENREAHLAAMLERLQEKGPPAAR
SIO_010081: STMN4
subclass of: SO_0000673
so part of: STMN4
location: join(147323..147335,147720..147815,148976..149184,149560..149751,150052..150072)
location: region:147323-150072:1
so has part: feature:147323-147335:1:exon
so has part: feature:147720-147815:1:exon
so has part: feature:148976-149184:1:exon
so has part: feature:149560-149751:1:exon
so has part: feature:150052-150072:1:exon

XP_038627136.1
type: Protein
SIO_000068: ncbiprotein

position:150072:1
position: 150072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147323-147335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147720-147815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148976-149184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149560-149751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150052-150072:1:exon

LOC119949528
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(154196..157884)
location: region:154196-157884:-1
so has part: feature:154196-157884:-1:exon
subclass of: SO_0000010

119949528
type: Gene
SIO_000068: ncbigene

position:154196:-1
position: 154196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157884:-1
position: 157884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154196-157884:-1:exon

LOC119949528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949528
product: angiopoietin-related protein 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771378.1
SIO_010081: LOC119949528
subclass of: SO_0000673
so part of: LOC119949528
location: complement(join(154196..155274,156470..156665,157019..157235,157429..157884))
location: region:154196-157884:-1
so has part: feature:157429-157884:-1:exon
so has part: feature:157019-157235:-1:exon
so has part: feature:156470-156665:-1:exon
so has part: feature:154196-155274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157429-157884:-1:exon

position:157429:-1
position: 157429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157019-157235:-1:exon

position:157019:-1
position: 157019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157235:-1
position: 157235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156470-156665:-1:exon

position:156470:-1
position: 156470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156665:-1
position: 156665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154196-155274:-1:exon

position:155274:-1
position: 155274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 7-like isoform X1
translation: MSGGRKTGVYSVWPSPGGQPITVLCEMDTEGGGWTVIQRRQNGSVNFSRTWGEYRDGFGSPQHEFWLGNHHIHRLTSRDHYVLRINLEDWDGQHKHAFYQCFSIEDEANDFRLHVAGFSGTIQDALAWYHDKRGFSTPGSGSLCADLARGGWWYHRCFFSNLNGVYYKGGHYTAQSQGGLGPDGIVWFPWKNTDYYSLKKTTMMIRPRAFRPHFSL
SIO_010081: LOC119949528
subclass of: SO_0000673
so part of: LOC119949528
location: complement(join(155128..155274,156470..156665,157019..157235,157429..157519))
location: region:155128-157519:-1
so has part: feature:157429-157519:-1:exon
so has part: feature:157019-157235:-1:exon
so has part: feature:156470-156665:-1:exon
so has part: feature:155128-155274:-1:exon

XP_038627306.1
type: Protein
SIO_000068: ncbiprotein

position:155128:-1
position: 155128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157519:-1
position: 157519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157429-157519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157019-157235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156470-156665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155128-155274:-1:exon

LOC119949528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949528
product: angiopoietin-related protein 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038771380.1
SIO_010081: LOC119949528
subclass of: SO_0000673
so part of: LOC119949528
location: complement(join(155155..155274,156400..156665,157019..157235,157429..157884))
location: region:155155-157884:-1
so has part: feature:157429-157884:-1:exon
so has part: feature:157019-157235:-1:exon
so has part: feature:156400-156665:-1:exon
so has part: feature:155155-155274:-1:exon

position:155155:-1
position: 155155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157429-157884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157019-157235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156400-156665:-1:exon

position:156400:-1
position: 156400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155155-155274:-1:exon

LOC119949528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 7-like isoform X2
translation: MSGGRKTGVYSVWPSPGGQPITVLCEMDTEGGGWTVIQRRQNGSVNFSRTWGEYRDGFGSPQHEFWLGNHHIHRLTSRDHYVLRINLEDWDGQHKHAFYQCFSIEDEANDFRLHVAGFSGTIQDALAWYHDKRGFSTPGSGSLCADLARGGWWYHRCFFSNLNGVYYKVGQRGGRGSKGLTPAPALAPRGPGRSLYSSEPGRAGS
SIO_010081: LOC119949528
subclass of: SO_0000673
so part of: LOC119949528
location: complement(join(155231..155274,156400..156665,157019..157235,157429..157519))
location: region:155231-157519:-1
so has part: feature:157429-157519:-1:exon
so has part: feature:157019-157235:-1:exon
so has part: feature:156400-156665:-1:exon
so has part: feature:155231-155274:-1:exon

XP_038627308.1
type: Protein
SIO_000068: ncbiprotein

position:155231:-1
position: 155231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157429-157519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157019-157235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156400-156665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155231-155274:-1:exon

EFR3B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EFR3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176177..206368)
location: region:176177-206368:-1
so has part: feature:176177-206368:-1:exon
subclass of: SO_0000010

119949525
type: Gene
SIO_000068: ncbigene

position:176177:-1
position: 176177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206368:-1
position: 206368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176177-206368:-1:exon

EFR3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EFR3B
product: EFR3 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771376.1
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176177..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185783,185923..185999,206257..206368))
location: region:176177-206368:-1
so has part: feature:206257-206368:-1:exon
so has part: feature:185923-185999:-1:exon
so has part: feature:185656-185783:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176177-176969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206257-206368:-1:exon

position:206257:-1
position: 206257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185923-185999:-1:exon

position:185923:-1
position: 185923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185999:-1
position: 185999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185656-185783:-1:exon

position:185656:-1
position: 185656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185783:-1
position: 185783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185382-185532:-1:exon

position:185382:-1
position: 185382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185532:-1
position: 185532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184516-184637:-1:exon

position:184516:-1
position: 184516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184637:-1
position: 184637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183893-184042:-1:exon

position:183893:-1
position: 183893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184042:-1
position: 184042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183336-183464:-1:exon

position:183336:-1
position: 183336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183464:-1
position: 183464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183121-183199:-1:exon

position:183121:-1
position: 183121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183199:-1
position: 183199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:182864-182999:-1:exon

position:182864:-1
position: 182864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182999:-1
position: 182999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:182235-182393:-1:exon

position:182235:-1
position: 182235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182393:-1
position: 182393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:181825-181936:-1:exon

position:181825:-1
position: 181825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181936:-1
position: 181936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:180819-180870:-1:exon

position:180819:-1
position: 180819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180870:-1
position: 180870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:180472-180644:-1:exon

position:180472:-1
position: 180472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180644:-1
position: 180644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:179890-179965:-1:exon

position:179890:-1
position: 179890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179965:-1
position: 179965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:179594-179755:-1:exon

position:179594:-1
position: 179594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179755:-1
position: 179755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:179374-179505:-1:exon

position:179374:-1
position: 179374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179505:-1
position: 179505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:179192-179259:-1:exon

position:179192:-1
position: 179192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179259:-1
position: 179259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:178734-178861:-1:exon

position:178734:-1
position: 178734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178861:-1
position: 178861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:178121-178212:-1:exon

position:178121:-1
position: 178121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178212:-1
position: 178212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:177906-177954:-1:exon

position:177906:-1
position: 177906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177954:-1
position: 177954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:177651-177757:-1:exon

position:177651:-1
position: 177651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177757:-1
position: 177757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:177396-177445:-1:exon

position:177396:-1
position: 177396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177445:-1
position: 177445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:176177-176969:-1:exon

position:176969:-1
position: 176969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFR3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EFR3B
product: EFR3 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771377.1
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176177..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185783,185923..185999,202246..202310))
location: region:176177-202310:-1
so has part: feature:202246-202310:-1:exon
so has part: feature:185923-185999:-1:exon
so has part: feature:185656-185783:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176177-176969:-1:exon

position:202310:-1
position: 202310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202246-202310:-1:exon

position:202246:-1
position: 202246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185923-185999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185656-185783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185382-185532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184516-184637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183893-184042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183336-183464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183121-183199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182864-182999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182235-182393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181825-181936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:180819-180870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180472-180644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179890-179965:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179594-179755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179374-179505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:179192-179259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178734-178861:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:178121-178212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177906-177954:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177651-177757:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177396-177445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176177-176969:-1:exon

EFR3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EFR3B
product: EFR3 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771375.1
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176177..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185783,185923..185999,196031..196223))
location: region:176177-196223:-1
so has part: feature:196031-196223:-1:exon
so has part: feature:185923-185999:-1:exon
so has part: feature:185656-185783:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176177-176969:-1:exon

position:196223:-1
position: 196223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196031-196223:-1:exon

position:196031:-1
position: 196031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185923-185999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185656-185783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185382-185532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184516-184637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183893-184042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183336-183464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183121-183199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182864-182999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182235-182393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181825-181936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:180819-180870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180472-180644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179890-179965:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179594-179755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179374-179505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:179192-179259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178734-178861:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:178121-178212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177906-177954:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177651-177757:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177396-177445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176177-176969:-1:exon

EFR3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EFR3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EFR3 homolog B isoform X2
translation: MTGVCGCCGALRPRYKRLVDNIFPEDPEDGLVKSNMEKLTFYALSAPEKLDRIGAYLSERLIRDVSRHRYGYVCIAMEALDQLLMACHCQSINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSGHDDLEIKTKIRMSGIKGLQGVVRKTVKDELQANIWDPQHMDKIVPSLLFNLQYVEEMESRAPSPLQATEKESPAELADRCLRELLGRAAYGNIKNAIKPVLIHLDNHSLWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLLSHLDANSRSAATVRAGIVEVLAQAAVIASTGSVGPTVLEMFNTLLRQLRLSIEYALTGSYDGAASAGTKIKEHEERMFQEAVIKTTGSFASALPTYQRSEVMLFIMGKVPLPSLHHPLEAGRTGENRNRLTQVMLLKSLLQVSTGFQCSNMLTALPSSFLDRLLSAALMEDAEIRLFVLEILISFIDRHGNRRKFSSISTLSDISVLKLKVEKCSRQDTVFMKKHSQQLYRHIYLSCKEETNAQTHYEALYGLLALISIELANEEVLVDLIRLVLAMQDLAQVNEANLPTYNRCALHALGAAYLNLISQLTTVPAFCQHIHEVIETRQKEAPYLLPEDVFVERPRLSRSLDRVVTEVLFRQSKISEVLGGSGYNSDRLCTPYTPQLTDEDRLSKRKSIGETISLQVEVESRNSPEKEARAPAEEITFETLKKAIVDSVAVEERERERRRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIFEITIRPPPSPSGTITAAYGQPQSHSVPVYEMKFPDLCVY
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176864..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185783,185923..185999,206257..206263))
location: region:176864-206263:-1
so has part: feature:206257-206263:-1:exon
so has part: feature:185923-185999:-1:exon
so has part: feature:185656-185783:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176864-176969:-1:exon

XP_038627304.1
type: Protein
SIO_000068: ncbiprotein

position:176864:-1
position: 176864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206263:-1
position: 206263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206257-206263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185923-185999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185656-185783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185382-185532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184516-184637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183893-184042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183336-183464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183121-183199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182864-182999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182235-182393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181825-181936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:180819-180870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180472-180644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179890-179965:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179594-179755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179374-179505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:179192-179259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178734-178861:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:178121-178212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177906-177954:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177651-177757:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177396-177445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176864-176969:-1:exon

EFR3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EFR3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EFR3 homolog B isoform X1
translation: MYGVCGCCGALRPRYKRLVDNIFPEDPEDGLVKSNMEKLTFYALSAPEKLDRIGAYLSERLIRDVSRHRYGYVCIAMEALDQLLMACHCQSINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSGHDDLEIKTKIRMSGIKGLQGVVRKTVKDELQANIWDPQHMDKIVPSLLFNLQYVEEMESRAPSPLQATEKESPAELADRCLRELLGRAAYGNIKNAIKPVLIHLDNHSLWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLLSHLDANSRSAATVRAGIVEVLAQAAVIASTGSVGPTVLEMFNTLLRQLRLSIEYALTGSYDGAASAGTKIKEHEERMFQEAVIKTTGSFASALPTYQRSEVMLFIMGKVPLPSLHHPLEAGRTGENRNRLTQVMLLKSLLQVSTGFQCSNMLTALPSSFLDRLLSAALMEDAEIRLFVLEILISFIDRHGNRRKFSSISTLSDISVLKLKVEKCSRQDTVFMKKHSQQLYRHIYLSCKEETNAQTHYEALYGLLALISIELANEEVLVDLIRLVLAMQDLAQVNEANLPTYNRCALHALGAAYLNLISQLTTVPAFCQHIHEVIETRQKEAPYLLPEDVFVERPRLSRSLDRVVTEVLFRQSKISEVLGGSGYNSDRLCTPYTPQLTDEDRLSKRKSIGETISLQVEVESRNSPEKEARAPAEEITFETLKKAIVDSVAVEERERERRRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIFEITIRPPPSPSGTITAAYGQPQSHSVPVYEMKFPDLCVY
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176864..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185783,185923..185999,196031..196037))
location: region:176864-196037:-1
so has part: feature:196031-196037:-1:exon
so has part: feature:185923-185999:-1:exon
so has part: feature:185656-185783:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176864-176969:-1:exon

XP_038627303.1
type: Protein
SIO_000068: ncbiprotein

position:196037:-1
position: 196037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196031-196037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185923-185999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185656-185783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185382-185532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184516-184637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183893-184042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183336-183464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183121-183199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182864-182999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182235-182393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181825-181936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:180819-180870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180472-180644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179890-179965:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179594-179755:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179374-179505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:179192-179259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178734-178861:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:178121-178212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177906-177954:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177651-177757:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177396-177445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176864-176969:-1:exon

EFR3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EFR3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EFR3 homolog B isoform X3
translation: MEKLTFYALSAPEKLDRIGAYLSERLIRDVSRHRYGYVCIAMEALDQLLMACHCQSINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSGHDDLEIKTKIRMSGIKGLQGVVRKTVKDELQANIWDPQHMDKIVPSLLFNLQYVEEMESRAPSPLQATEKESPAELADRCLRELLGRAAYGNIKNAIKPVLIHLDNHSLWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLLSHLDANSRSAATVRAGIVEVLAQAAVIASTGSVGPTVLEMFNTLLRQLRLSIEYALTGSYDGAASAGTKIKEHEERMFQEAVIKTTGSFASALPTYQRSEVMLFIMGKVPLPSLHHPLEAGRTGENRNRLTQVMLLKSLLQVSTGFQCSNMLTALPSSFLDRLLSAALMEDAEIRLFVLEILISFIDRHGNRRKFSSISTLSDISVLKLKVEKCSRQDTVFMKKHSQQLYRHIYLSCKEETNAQTHYEALYGLLALISIELANEEVLVDLIRLVLAMQDLAQVNEANLPTYNRCALHALGAAYLNLISQLTTVPAFCQHIHEVIETRQKEAPYLLPEDVFVERPRLSRSLDRVVTEVLFRQSKISEVLGGSGYNSDRLCTPYTPQLTDEDRLSKRKSIGETISLQVEVESRNSPEKEARAPAEEITFETLKKAIVDSVAVEERERERRRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIFEITIRPPPSPSGTITAAYGQPQSHSVPVYEMKFPDLCVY
SIO_010081: EFR3B
subclass of: SO_0000673
so part of: EFR3B
location: complement(join(176864..176969,177396..177445,177651..177757,177906..177954,178121..178212,178734..178861,179192..179259,179374..179505,179594..179755,179890..179965,180472..180644,180819..180870,181825..181936,182235..182393,182864..182999,183121..183199,183336..183464,183893..184042,184516..184637,185382..185532,185656..185762))
location: region:176864-185762:-1
so has part: feature:185656-185762:-1:exon
so has part: feature:185382-185532:-1:exon
so has part: feature:184516-184637:-1:exon
so has part: feature:183893-184042:-1:exon
so has part: feature:183336-183464:-1:exon
so has part: feature:183121-183199:-1:exon
so has part: feature:182864-182999:-1:exon
so has part: feature:182235-182393:-1:exon
so has part: feature:181825-181936:-1:exon
so has part: feature:180819-180870:-1:exon
so has part: feature:180472-180644:-1:exon
so has part: feature:179890-179965:-1:exon
so has part: feature:179594-179755:-1:exon
so has part: feature:179374-179505:-1:exon
so has part: feature:179192-179259:-1:exon
so has part: feature:178734-178861:-1:exon
so has part: feature:178121-178212:-1:exon
so has part: feature:177906-177954:-1:exon
so has part: feature:177651-177757:-1:exon
so has part: feature:177396-177445:-1:exon
so has part: feature:176864-176969:-1:exon

XP_038627305.1
type: Protein
SIO_000068: ncbiprotein

position:185762:-1
position: 185762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185656-185762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185382-185532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184516-184637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183893-184042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183336-183464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183121-183199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182864-182999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:182235-182393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:181825-181936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180819-180870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180472-180644:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:179890-179965:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179594-179755:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179374-179505:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179192-179259:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178734-178861:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:178121-178212:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177906-177954:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177651-177757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177396-177445:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176864-176969:-1:exon

DNAJC27
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DNAJC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213337..225246
location: region:213337-225246:1
so has part: feature:213337-225246:1:exon
subclass of: SO_0000010

119949317
type: Gene
SIO_000068: ncbigene

position:213337:1
position: 213337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225246:1
position: 225246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-225246:1:exon

DNAJC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DNAJC27
product: DnaJ heat shock protein family (Hsp40) member C27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038770996.1
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,224925..225246)
location: region:213337-225246:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:224925-225246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

position:213423:1
position: 213423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

position:218983:1
position: 218983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219065:1
position: 219065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

position:220358:1
position: 220358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220427:1
position: 220427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

position:221524:1
position: 221524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221688:1
position: 221688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

position:222728:1
position: 222728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222850:1
position: 222850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

position:223183:1
position: 223183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223343:1
position: 223343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:224925-225246:1:exon

position:224925:1
position: 224925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DNAJC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 27 isoform X2
translation: MEPNAPKRREPRGALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGAVLVYDVGQKESFDALESWLTEMRQELGPHGNMDNVIFTVCANKIDVSKHRCVDENEGRLWAESRGFLYFETSAQTGEGIGDMFQTFFSAIVDLCDHGGKRPPASLSVGFSKEQADTIRRIRGSKDSWDMLGVKPGSSRPDVEEWAECLWNHVPASLGTTKLSDDKELSRLR
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,224925..225027)
location: region:213337-225027:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:224925-225027:1:exon

XP_038626924.1
type: Protein
SIO_000068: ncbiprotein

position:225027:1
position: 225027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224925-225027:1:exon

DNAJC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DNAJC27
product: DnaJ heat shock protein family (Hsp40) member C27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770997.1
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,223708..223801,224925..224999)
location: region:213337-224999:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:223708-223801:1:exon
so has part: feature:224925-224999:1:exon

position:224999:1
position: 224999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223708-223801:1:exon

position:223708:1
position: 223708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223801:1
position: 223801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:224925-224999:1:exon

DNAJC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DNAJC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 27 isoform X3
translation: MEPNAPKRREPRGALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGAVLVYDVGQKESFDALESWLTEMRQELGPHGNMDNVIFTVCANKIDVSKHRCVDENEGRLWAESRGFLYFETSAQTGEGIGDMFQTFFSAIVDLCDHGGKRPPASLSVGFSKEQADTIRRIRGSKDSWDMLGVKPGSSRDEVNRAYRKLAVLLHPDKCVAPGSEDAFKAVT
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,223708..223801,224925..224930)
location: region:213337-224930:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:223708-223801:1:exon
so has part: feature:224925-224930:1:exon

XP_038626925.1
type: Protein
SIO_000068: ncbiprotein

position:224930:1
position: 224930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223708-223801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224925-224930:1:exon

DNAJC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DNAJC27
product: DnaJ heat shock protein family (Hsp40) member C27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038770995.1
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,223708..223862)
location: region:213337-223862:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:223708-223862:1:exon

position:223862:1
position: 223862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223708-223862:1:exon

DNAJC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DNAJC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 27 isoform X1
translation: MEPNAPKRREPRGALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGAVLVYDVGQKESFDALESWLTEMRQELGPHGNMDNVIFTVCANKIDVSKHRCVDENEGRLWAESRGFLYFETSAQTGEGIGDMFQTFFSAIVDLCDHGGKRPPASLSVGFSKEQADTIRRIRGSKDSWDMLGVKPGSSRDEVNRAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTSLLKNIK
SIO_010081: DNAJC27
subclass of: SO_0000673
so part of: DNAJC27
location: join(213337..213423,218983..219065,220358..220427,221524..221688,222728..222850,223183..223343,223708..223840)
location: region:213337-223840:1
so has part: feature:213337-213423:1:exon
so has part: feature:218983-219065:1:exon
so has part: feature:220358-220427:1:exon
so has part: feature:221524-221688:1:exon
so has part: feature:222728-222850:1:exon
so has part: feature:223183-223343:1:exon
so has part: feature:223708-223840:1:exon

XP_038626923.1
type: Protein
SIO_000068: ncbiprotein

position:223840:1
position: 223840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213337-213423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218983-219065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220358-220427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221524-221688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222728-222850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223183-223343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223708-223840:1:exon

LOC119949277
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227519..229431)
location: region:227519-229431:-1
so has part: feature:227519-229431:-1:exon
subclass of: SO_0000011

119949277
type: Gene
SIO_000068: ncbigene

position:227519:-1
position: 227519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229431:-1
position: 229431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227519-229431:-1:exon

LOC119949277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119949277
product: uncharacterized LOC119949277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005457184.1
SIO_010081: LOC119949277
subclass of: SO_0000673
so part of: LOC119949277
location: complement(join(227519..227975,229243..229431))
location: region:227519-229431:-1
so has part: feature:229243-229431:-1:exon
so has part: feature:227519-227975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229243-229431:-1:exon

position:229243:-1
position: 229243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227519-227975:-1:exon

position:227975:-1
position: 227975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADCY3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ADCY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237596..264317
location: region:237596-264317:1
so has part: feature:237596-264317:1:exon
subclass of: SO_0000010

119949275
type: Gene
SIO_000068: ncbigene

position:237596:1
position: 237596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264317:1
position: 264317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237596-264317:1:exon

ADCY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ADCY3
product: adenylate cyclase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770895.1
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(237596..237626,237902..238680,252056..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257437,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260939..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..264317)
location: region:237596-264317:1
so has part: feature:237596-237626:1:exon
so has part: feature:237902-238680:1:exon
so has part: feature:252056-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257437:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260939-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-264317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237596-237626:1:exon

position:237626:1
position: 237626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237902-238680:1:exon

position:237902:1
position: 237902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238680:1
position: 238680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:252056-252205:1:exon

position:252056:1
position: 252056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252205:1
position: 252205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255555-255685:1:exon

position:255555:1
position: 255555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255685:1
position: 255685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255974-256085:1:exon

position:255974:1
position: 255974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256085:1
position: 256085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:256427-256554:1:exon

position:256427:1
position: 256427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256554:1
position: 256554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:256652-256810:1:exon

position:256652:1
position: 256652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256810:1
position: 256810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:256997-257168:1:exon

position:256997:1
position: 256997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257168:1
position: 257168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257309-257437:1:exon

position:257309:1
position: 257309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257437:1
position: 257437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:257936-258078:1:exon

position:257936:1
position: 257936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258078:1
position: 258078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:258236-258397:1:exon

position:258236:1
position: 258236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258397:1
position: 258397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:258584-258671:1:exon

position:258584:1
position: 258584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258671:1
position: 258671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:260220-260336:1:exon

position:260220:1
position: 260220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260336:1
position: 260336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:260507-260754:1:exon

position:260507:1
position: 260507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260754:1
position: 260754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:260939-261007:1:exon

position:260939:1
position: 260939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261007:1
position: 261007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:261326-261407:1:exon

position:261326:1
position: 261326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261407:1
position: 261407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:261858-262016:1:exon

position:261858:1
position: 261858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262016:1
position: 262016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:262190-262336:1:exon

position:262190:1
position: 262190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262336:1
position: 262336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:262842-262961:1:exon

position:262842:1
position: 262842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262961:1
position: 262961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:263082-263205:1:exon

position:263082:1
position: 263082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263205:1
position: 263205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:263296-263420:1:exon

position:263296:1
position: 263296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263420:1
position: 263420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:263674-264317:1:exon

position:263674:1
position: 263674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADCY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ADCY3
product: adenylate cyclase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770896.1
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(237596..237626,237902..238680,252056..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257437,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260942..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..264317)
location: region:237596-264317:1
so has part: feature:237596-237626:1:exon
so has part: feature:237902-238680:1:exon
so has part: feature:252056-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257437:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260942-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-264317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237596-237626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237902-238680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252056-252205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255555-255685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255974-256085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256427-256554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256652-256810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256997-257168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257309-257437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257936-258078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258236-258397:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258584-258671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260220-260336:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260507-260754:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:260942-261007:1:exon

position:260942:1
position: 260942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:261326-261407:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:261858-262016:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262190-262336:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262842-262961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:263082-263205:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:263296-263420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263674-264317:1:exon

ADCY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ADCY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 3 isoform X1
translation: MSPPRAFPEPEYSAEYSVSLPSDAERAGAGAGAGAGAGAGAAGSARPHEVTARGSGPCRCLPRFLRLTFVPASLEHLYQTYFKRQRHETLLVLGIFAVLFDCFVLVTCAAVFSPDKVAPIAVAGGGLLLAALLLGLCRRGLRGAGGARRAVPYLLWLLIVAQIFCYLGLAFFRAQAASDTVGWLAFFVFSSFITLPLGLTPLLLVSGASCAVHTLVLGVTVAQRRRERLDWAYLLREVLANVVVYLCAIALGIMSYYMADRKHRKAFLEARQSLEVKINLEEQGQQQESLMLSILPKHVADEMLKDMKRDKTQQELQQFNTMYMYRHENVSILFADIVGFTQLSSTCSAQELVKLLNELFARFDKLAAKYHQLRIKILGDCYYCICGLPDYREDHAVCSILMGLAMVDAISYVREKTQTGVDMRVGVHTGTVLGGVLGQKRWQYDVWSTDVTVANKMEAGGIPGRVHISQSTLDCLKGEFEVEPGNGGSRCDYLEDKGIVTYLICASGPAQLQARSGVNGVNVALPSSLPSSPAPFDATEAKEQNGNVNTTCSSPQKREELDAQVVKPSFPNPRRRLRLRDLAERVVDASEDENELNQLLNDALLERELAQGAKDRTTFLLSMRFMDPELETRYSVEKEKQSGAAFSCSCVVLLCTALIWALLDPGLMANYVTFVVGEGLLLILTVCSLASIFPRVFSKKLVAFSTWIDRTRWARNTWAVAAIIILIMADLVDMLSCLHCSGDPGNWTAAGGCAANPKYSSYVAILTLIAIVMLVQVSHMVKLTLMLLLLGGVGVVNIYAWHPAFDQYDRQQFQEHDSSPHLVSPENRVPFPDLLNGTSSLPLVPSKYSMTAMLFVMMLSFYYFSRHVEKLARTLFLWKMEVHDQKERVYEMRRWNEALVTNMLPEHVARHFLGSKKRDEELYSQTYDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFDSLLDNPQFRIITKIKTIGSTYMAASGVTPEANTNGFTSASKEDQSDKERWQHLADLADFALAMKDTLTNINNQSFNNFMLRIGMNKGGVLAGVIGARKPHYDIWGNTVNVASRMESTGVMGNIQVVEETQDILRTYGFRFVRRGRVFVKGKGELLTFFLKGREKVAPFPNGSSSVTLPHQVVDCS
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(237970..238680,252056..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257437,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260939..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..263859)
location: region:237970-263859:1
so has part: feature:237970-238680:1:exon
so has part: feature:252056-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257437:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260939-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-263859:1:exon

XP_038626823.1
type: Protein
SIO_000068: ncbiprotein

position:237970:1
position: 237970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263859:1
position: 263859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237970-238680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252056-252205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255555-255685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255974-256085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256427-256554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256652-256810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256997-257168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257309-257437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257936-258078:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258236-258397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258584-258671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260220-260336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260507-260754:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260939-261007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:261326-261407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261858-262016:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262190-262336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262842-262961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:263082-263205:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:263296-263420:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:263674-263859:1:exon

ADCY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ADCY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 3 isoform X2
translation: MSPPRAFPEPEYSAEYSVSLPSDAERAGAGAGAGAGAGAGAAGSARPHEVTARGSGPCRCLPRFLRLTFVPASLEHLYQTYFKRQRHETLLVLGIFAVLFDCFVLVTCAAVFSPDKVAPIAVAGGGLLLAALLLGLCRRGLRGAGGARRAVPYLLWLLIVAQIFCYLGLAFFRAQAASDTVGWLAFFVFSSFITLPLGLTPLLLVSGASCAVHTLVLGVTVAQRRRERLDWAYLLREVLANVVVYLCAIALGIMSYYMADRKHRKAFLEARQSLEVKINLEEQGQQQESLMLSILPKHVADEMLKDMKRDKTQQELQQFNTMYMYRHENVSILFADIVGFTQLSSTCSAQELVKLLNELFARFDKLAAKYHQLRIKILGDCYYCICGLPDYREDHAVCSILMGLAMVDAISYVREKTQTGVDMRVGVHTGTVLGGVLGQKRWQYDVWSTDVTVANKMEAGGIPGRVHISQSTLDCLKGEFEVEPGNGGSRCDYLEDKGIVTYLICASGPAQLQARSGVNGVNVALPSSLPSSPAPFDATEAKEQNGNVNTTCSSPQKREELDAQVVKPSFPNPRRRLRLRDLAERVVDASEDENELNQLLNDALLERELAQGAKDRTTFLLSMRFMDPELETRYSVEKEKQSGAAFSCSCVVLLCTALIWALLDPGLMANYVTFVVGEGLLLILTVCSLASIFPRVFSKKLVAFSTWIDRTRWARNTWAVAAIIILIMADLVDMLSCLHCSGDPGNWTAAGGCAANPKYSSYVAILTLIAIVMLVQVSHMVKLTLMLLLLGGVGVVNIYAWHPAFDQYDRQQFQEHDSPHLVSPENRVPFPDLLNGTSSLPLVPSKYSMTAMLFVMMLSFYYFSRHVEKLARTLFLWKMEVHDQKERVYEMRRWNEALVTNMLPEHVARHFLGSKKRDEELYSQTYDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFDSLLDNPQFRIITKIKTIGSTYMAASGVTPEANTNGFTSASKEDQSDKERWQHLADLADFALAMKDTLTNINNQSFNNFMLRIGMNKGGVLAGVIGARKPHYDIWGNTVNVASRMESTGVMGNIQVVEETQDILRTYGFRFVRRGRVFVKGKGELLTFFLKGREKVAPFPNGSSSVTLPHQVVDCS
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(237970..238680,252056..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257437,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260942..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..263859)
location: region:237970-263859:1
so has part: feature:237970-238680:1:exon
so has part: feature:252056-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257437:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260942-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-263859:1:exon

XP_038626824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237970-238680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252056-252205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255555-255685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255974-256085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256427-256554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256652-256810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256997-257168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257309-257437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257936-258078:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258236-258397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258584-258671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260220-260336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260507-260754:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260942-261007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:261326-261407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261858-262016:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262190-262336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262842-262961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:263082-263205:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:263296-263420:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:263674-263859:1:exon

ADCY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ADCY3
product: adenylate cyclase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770897.1
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(238117..238680,252056..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257449,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260939..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..264317)
location: region:238117-264317:1
so has part: feature:238117-238680:1:exon
so has part: feature:252056-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257449:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260939-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-264317:1:exon

position:238117:1
position: 238117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238117-238680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252056-252205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255555-255685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255974-256085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256427-256554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256652-256810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256997-257168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257309-257449:1:exon

position:257449:1
position: 257449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257936-258078:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258236-258397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258584-258671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260220-260336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260507-260754:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260939-261007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:261326-261407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261858-262016:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262190-262336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262842-262961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:263082-263205:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:263296-263420:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:263674-264317:1:exon

ADCY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ADCY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 3 isoform X3
translation: MSYYMADRKHRKAFLEARQSLEVKINLEEQGQQQESLMLSILPKHVADEMLKDMKRDKTQQELQQFNTMYMYRHENVSILFADIVGFTQLSSTCSAQELVKLLNELFARFDKLAAKYHQLRIKILGDCYYCICGLPDYREDHAVCSILMGLAMVDAISYVREKTQTGVDMRVGVHTGTVLGGVLGQKRWQYDVWSTDVTVANKMEAGGIPGRVHISQSTLDCLKGEFEVEPGNGGSRCDYLEDKGIVTYLICASGPAQLQARSGVNGVNVALPSSLPSSPAPFDATEAKEQNGNVNTTCSSPQKREELDAQVSAEVVKPSFPNPRRRLRLRDLAERVVDASEDENELNQLLNDALLERELAQGAKDRTTFLLSMRFMDPELETRYSVEKEKQSGAAFSCSCVVLLCTALIWALLDPGLMANYVTFVVGEGLLLILTVCSLASIFPRVFSKKLVAFSTWIDRTRWARNTWAVAAIIILIMADLVDMLSCLHCSGDPGNWTAAGGCAANPKYSSYVAILTLIAIVMLVQVSHMVKLTLMLLLLGGVGVVNIYAWHPAFDQYDRQQFQEHDSSPHLVSPENRVPFPDLLNGTSSLPLVPSKYSMTAMLFVMMLSFYYFSRHVEKLARTLFLWKMEVHDQKERVYEMRRWNEALVTNMLPEHVARHFLGSKKRDEELYSQTYDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFDSLLDNPQFRIITKIKTIGSTYMAASGVTPEANTNGFTSASKEDQSDKERWQHLADLADFALAMKDTLTNINNQSFNNFMLRIGMNKGGVLAGVIGARKPHYDIWGNTVNVASRMESTGVMGNIQVVEETQDILRTYGFRFVRRGRVFVKGKGELLTFFLKGREKVAPFPNGSSSVTLPHQVVDCS
SIO_010081: ADCY3
subclass of: SO_0000673
so part of: ADCY3
location: join(252104..252205,255555..255685,255974..256085,256427..256554,256652..256810,256997..257168,257309..257449,257936..258078,258236..258397,258584..258671,260220..260336,260507..260754,260939..261007,261326..261407,261858..262016,262190..262336,262842..262961,263082..263205,263296..263420,263674..263859)
location: region:252104-263859:1
so has part: feature:252104-252205:1:exon
so has part: feature:255555-255685:1:exon
so has part: feature:255974-256085:1:exon
so has part: feature:256427-256554:1:exon
so has part: feature:256652-256810:1:exon
so has part: feature:256997-257168:1:exon
so has part: feature:257309-257449:1:exon
so has part: feature:257936-258078:1:exon
so has part: feature:258236-258397:1:exon
so has part: feature:258584-258671:1:exon
so has part: feature:260220-260336:1:exon
so has part: feature:260507-260754:1:exon
so has part: feature:260939-261007:1:exon
so has part: feature:261326-261407:1:exon
so has part: feature:261858-262016:1:exon
so has part: feature:262190-262336:1:exon
so has part: feature:262842-262961:1:exon
so has part: feature:263082-263205:1:exon
so has part: feature:263296-263420:1:exon
so has part: feature:263674-263859:1:exon

XP_038626825.1
type: Protein
SIO_000068: ncbiprotein

position:252104:1
position: 252104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252104-252205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255555-255685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255974-256085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256427-256554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256652-256810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256997-257168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257309-257449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257936-258078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258236-258397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258584-258671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260220-260336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260507-260754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260939-261007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261326-261407:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:261858-262016:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:262190-262336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262842-262961:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:263082-263205:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:263296-263420:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:263674-263859:1:exon

CENPO
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CENPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264263..270808)
location: region:264263-270808:-1
so has part: feature:264263-270808:-1:exon
subclass of: SO_0000010

119949276
type: Gene
SIO_000068: ncbigene

position:264263:-1
position: 264263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270808:-1
position: 270808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264263-270808:-1:exon

CENPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CENPO
product: centromere protein O
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038770898.1
SIO_010081: CENPO
subclass of: SO_0000673
so part of: CENPO
location: complement(join(264263..264618,264666..264773,265645..265816,266922..267181,268255..268384,269236..269414,270730..270808))
location: region:264263-270808:-1
so has part: feature:270730-270808:-1:exon
so has part: feature:269236-269414:-1:exon
so has part: feature:268255-268384:-1:exon
so has part: feature:266922-267181:-1:exon
so has part: feature:265645-265816:-1:exon
so has part: feature:264666-264773:-1:exon
so has part: feature:264263-264618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270730-270808:-1:exon

position:270730:-1
position: 270730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269236-269414:-1:exon

position:269236:-1
position: 269236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269414:-1
position: 269414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268255-268384:-1:exon

position:268255:-1
position: 268255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268384:-1
position: 268384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266922-267181:-1:exon

position:266922:-1
position: 266922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267181:-1
position: 267181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265645-265816:-1:exon

position:265645:-1
position: 265645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265816:-1
position: 265816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264666-264773:-1:exon

position:264666:-1
position: 264666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264773:-1
position: 264773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264263-264618:-1:exon

position:264618:-1
position: 264618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CENPO
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: centromere protein O
translation: MEPVTAFLRDGVLSHLETLEARAVGLARQQEARETQRRQQERLEVLSAKIRDLKRQRDELRAKAKARRTQRLPRAGASSRSLDPTPSRELTEKALLEMRLEHTQAVLEAFRWTGISGKQTKPGACLYIGTAFEGTLLDRYYVDLVGRDPPRIRRHSIPPFIPLEQLAARYLRADMRGFLFCLSRHLNAYASRKYQADQFQSRFAACLTGPMQRNSACNLLSFTYHLEQEGQSFHFAAKLAYADPTWSLPTDVTVTVQGTPSALREEQRAAHVAQFRQEPLHRAFATLSGLGLDGGRLEGVSEAIPGLGPQDGPSSGLLLKNLGPGGWMGRGSSGETAGCGVPCPPFPGPKGEHATRARVEI
SIO_010081: CENPO
subclass of: SO_0000673
so part of: CENPO
location: complement(join(264412..264618,264666..264773,265645..265816,266922..267181,268255..268384,269236..269414,270730..270760))
location: region:264412-270760:-1
so has part: feature:270730-270760:-1:exon
so has part: feature:269236-269414:-1:exon
so has part: feature:268255-268384:-1:exon
so has part: feature:266922-267181:-1:exon
so has part: feature:265645-265816:-1:exon
so has part: feature:264666-264773:-1:exon
so has part: feature:264412-264618:-1:exon

XP_038626826.1
type: Protein
SIO_000068: ncbiprotein

position:264412:-1
position: 264412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270760:-1
position: 270760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270730-270760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269236-269414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268255-268384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266922-267181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265645-265816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264666-264773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264412-264618:-1:exon

PTRHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PTRHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272700..279404
location: region:272700-279404:1
so has part: feature:272700-279404:1:exon
subclass of: SO_0000010

119949654
type: Gene
SIO_000068: ncbigene

position:272700:1
position: 272700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279404:1
position: 279404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272700-279404:1:exon

PTRHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PTRHD1
product: peptidyl-tRNA hydrolase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771542.1
SIO_010081: PTRHD1
subclass of: SO_0000673
so part of: PTRHD1
location: join(272700..272938,277854..279404)
location: region:272700-279404:1
so has part: feature:272700-272938:1:exon
so has part: feature:277854-279404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272700-272938:1:exon

position:272938:1
position: 272938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277854-279404:1:exon

position:277854:1
position: 277854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTRHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PTRHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative peptidyl-tRNA hydrolase PTRHD1
translation: MSVPRAGPRVLVQYVVLRGDLSRAPLSWPLGALVAQACHAATAALHVYRAHPDTAAYLGDLGSMRKVVLEIPDEAALKALATHLQQESVDHTLWLEQPENTPTCLALRPYPKDEVNSHLRKLKLLK
SIO_010081: PTRHD1
subclass of: SO_0000673
so part of: PTRHD1
location: join(272729..272938,277854..278024)
location: region:272729-278024:1
so has part: feature:272729-272938:1:exon
so has part: feature:277854-278024:1:exon

XP_038627470.1
type: Protein
SIO_000068: ncbiprotein

position:272729:1
position: 272729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278024:1
position: 278024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272729-272938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277854-278024:1:exon

NCOA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280407..329044)
location: region:280407-329044:-1
so has part: feature:280407-329044:-1:exon
subclass of: SO_0000010

119949242
type: Gene
SIO_000068: ncbigene

position:280407:-1
position: 280407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329044:-1
position: 329044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280407-329044:-1:exon

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038770839.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280407..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,319267..319380,328864..329044))
location: region:280407-329044:-1
so has part: feature:328864-329044:-1:exon
so has part: feature:319267-319380:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280407-280840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328864-329044:-1:exon

position:328864:-1
position: 328864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319267-319380:-1:exon

position:319267:-1
position: 319267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319380:-1
position: 319380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304212-304317:-1:exon

position:304212:-1
position: 304212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304317:-1
position: 304317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:303042-303208:-1:exon

position:303042:-1
position: 303042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303208:-1
position: 303208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301803-301900:-1:exon

position:301803:-1
position: 301803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301900:-1
position: 301900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299116-299293:-1:exon

position:299116:-1
position: 299116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299293:-1
position: 299293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:298641-298832:-1:exon

position:298641:-1
position: 298641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298832:-1
position: 298832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:298027-298122:-1:exon

position:298027:-1
position: 298027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298122:-1
position: 298122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:296598-296738:-1:exon

position:296598:-1
position: 296598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296738:-1
position: 296738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295634-295781:-1:exon

position:295634:-1
position: 295634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295781:-1
position: 295781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:293722-295048:-1:exon

position:293722:-1
position: 293722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295048:-1
position: 295048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:291964-292144:-1:exon

position:291964:-1
position: 291964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292144:-1
position: 292144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:290806-290935:-1:exon

position:290806:-1
position: 290806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290935:-1
position: 290935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:289291-289459:-1:exon

position:289291:-1
position: 289291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289459:-1
position: 289459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:288223-288552:-1:exon

position:288223:-1
position: 288223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288552:-1
position: 288552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:287718-287819:-1:exon

position:287718:-1
position: 287718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287819:-1
position: 287819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:287027-287420:-1:exon

position:287027:-1
position: 287027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287420:-1
position: 287420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:284250-284400:-1:exon

position:284250:-1
position: 284250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284400:-1
position: 284400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:283969-284137:-1:exon

position:283969:-1
position: 283969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284137:-1
position: 284137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:283565-283651:-1:exon

position:283565:-1
position: 283565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283651:-1
position: 283651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:280407-280840:-1:exon

position:280840:-1
position: 280840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770840.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280407..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,319263..319380,328864..329044))
location: region:280407-329044:-1
so has part: feature:328864-329044:-1:exon
so has part: feature:319263-319380:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280407-280840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328864-329044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319263-319380:-1:exon

position:319263:-1
position: 319263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304212-304317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280407-280840:-1:exon

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038770841.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280407..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,308710..308736))
location: region:280407-308736:-1
so has part: feature:308710-308736:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280407-280840:-1:exon

position:308736:-1
position: 308736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308710-308736:-1:exon

position:308710:-1
position: 308710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304212-304317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280407-280840:-1:exon

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038770842.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280407..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,304645..304694))
location: region:280407-304694:-1
so has part: feature:304645-304694:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280407-280840:-1:exon

position:304694:-1
position: 304694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304645-304694:-1:exon

position:304645:-1
position: 304645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304212-304317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280407-280840:-1:exon

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038770843.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288549,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,319267..319380,328864..329044))
location: region:280694-329044:-1
so has part: feature:328864-329044:-1:exon
so has part: feature:319267-319380:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288549:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

position:280694:-1
position: 280694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328864-329044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319267-319380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304212-304317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288223-288549:-1:exon

position:288549:-1
position: 288549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X2
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQMQQVQVFADVQCTVNVVGGEPYHLGQAAPLGPPSSQVQKSLLQQLLTE
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288549,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280694-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288549:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

XP_038626771.1
type: Protein
SIO_000068: ncbiprotein

position:304300:-1
position: 304300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288549:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X1
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQMQQVQVFADVQCTVNVVGGEPYHLGQAAPLGPPSSQVQKSLLQQLLTE
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280694-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

XP_038626767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X1
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQMQQVQVFADVQCTVNVVGGEPYHLGQAAPLGPPSSQVQKSLLQQLLTE
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280694-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

XP_038626768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X1
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQMQQVQVFADVQCTVNVVGGEPYHLGQAAPLGPPSSQVQKSLLQQLLTE
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280694-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

XP_038626769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X1
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQMQQVQVFADVQCTVNVVGGEPYHLGQAAPLGPPSSQVQKSLLQQLLTE
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280694..280840,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280694-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280694-280840:-1:exon

XP_038626770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280694-280840:-1:exon

NCOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NCOA1
product: nuclear receptor coactivator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038770844.1
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280754..280840,280921..280975,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304317,319267..319380,328864..329044))
location: region:280754-329044:-1
so has part: feature:328864-329044:-1:exon
so has part: feature:319267-319380:-1:exon
so has part: feature:304212-304317:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280921-280975:-1:exon
so has part: feature:280754-280840:-1:exon

position:280754:-1
position: 280754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328864-329044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319267-319380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304212-304317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280921-280975:-1:exon

position:280921:-1
position: 280921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280975:-1
position: 280975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:280754-280840:-1:exon

NCOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NCOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 1 isoform X3
translation: MSGLGDSPTDPANPDSRKRKGSPCDTLGSSPEKRRREQENKYLEELAELLSANLGDIDSLSVKPDKCEILRKTVGQIQQMRRREQEKAAADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTVYLGYKQEELMNTSVYSVLHVGDHAEFIKNLLPKSLVNGVPWPQEAPRRSGHTFNCRMLLRGPGGQGADGTDGAEARSQRYEMMQCFTVSQPKSITEEAEDFQSCLICIARRFPRPPAVPGSESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPHGREPSYARQLFQEVMTRGAAFSPPYRFSLSDGTVLSARTKCKLCYPQSPDAQPFIMGIHIVDRDPSALSPPESPSSGLALPRVNPTGHPALSPAPGLALASALPPAASSQPPAPGPPPGPPPGSSSGSSGGSSSSPSQSNFGCLLGSQAPATGLASSAGLASSTPGTSPALGLSGSPLGSPASLPPTQFASPRRQMSPGLLARPRVPGNPFSPPSLPSLGSPVGGASGACPGAHRPYAPSPGTTLQGVCEGPGHPAGFAPAPPVLRPPGSQGSPGPPAPQGPLGTPGRLGGKTEPRDGKEVASLLSEMMPATDSPGEGQAPDAGMLPGGVRGDHRRSERDGKGSQGGGHRPGQLPANTAEQRLLPADADPGSGCRDASSCPGALSGSSGSSGACPSSHSSLTERHKILHRLLQEGSPSDISSPPPEPERRDSGPPGLPAGRAEQEGARKKDQKDHQLLRYLLDKNEKTGAAPGPLSLDDVEVNLERAEPGTPPSPDEARLGPQGRFTTDLEQLDQLLPALEKAVQLPGLCGSDRTEGSAPGVTVKPEMVPTPLQPPSARLFTGIKRLPDPDLGSTDLQSGQPGAGDPLPWADNALSSVARGGPPAKPEDPCLGSQLDELLCPPTTAEGRNDEKALLEQLVAFLSGQDETELAELDRALGIDKLVQQGGGVEVLGEGFQPPPAPQPALLDPKPGMYAQPYPSSASPAAAAAAAAAAFQGLSRQKPTFGPGPGQGPAPRGAFPTAMGLQPRPPGSRAPTASNQLRLQLQQRLQGQQQLMHQNRQALFSQFAASAPVGIAVRSGMLQQMASQPPLNAQMLAQRQRELYSQQHRQRQLLQQRAMLMRQHSFAGSLPPTAPGMSAQMGAARLAQPSPHQFPYPPSYGTNPGTPPSSSSPFSPLPPGPEAALVSRGGVGSRAMMGGQFGAGMSPQTQQNVFQYAGSGMGQPGEAGFAPALSPGSPTGSPQMAAAQPSPGYQSPDVKPWQQGALGASNMFGQAAASQQALYNNMSITVAMAGPGVQALNPVNGHVQMGSLSGLNAAAAAVCAEQVADPTLMPGSLYCSQLPSDLLKADPDGAQGKKTEELFCVLATD
SIO_010081: NCOA1
subclass of: SO_0000673
so part of: NCOA1
location: complement(join(280931..280975,283565..283651,283969..284137,284250..284400,287027..287420,287718..287819,288223..288552,289291..289459,290806..290935,291964..292144,293722..295048,295634..295781,296598..296738,298027..298122,298641..298832,299116..299293,301803..301900,303042..303208,304212..304300))
location: region:280931-304300:-1
so has part: feature:304212-304300:-1:exon
so has part: feature:303042-303208:-1:exon
so has part: feature:301803-301900:-1:exon
so has part: feature:299116-299293:-1:exon
so has part: feature:298641-298832:-1:exon
so has part: feature:298027-298122:-1:exon
so has part: feature:296598-296738:-1:exon
so has part: feature:295634-295781:-1:exon
so has part: feature:293722-295048:-1:exon
so has part: feature:291964-292144:-1:exon
so has part: feature:290806-290935:-1:exon
so has part: feature:289291-289459:-1:exon
so has part: feature:288223-288552:-1:exon
so has part: feature:287718-287819:-1:exon
so has part: feature:287027-287420:-1:exon
so has part: feature:284250-284400:-1:exon
so has part: feature:283969-284137:-1:exon
so has part: feature:283565-283651:-1:exon
so has part: feature:280931-280975:-1:exon

XP_038626772.1
type: Protein
SIO_000068: ncbiprotein

position:280931:-1
position: 280931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304212-304300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303042-303208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301803-301900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299116-299293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298641-298832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298027-298122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296598-296738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295634-295781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293722-295048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291964-292144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290806-290935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289291-289459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288223-288552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287718-287819:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:287027-287420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284250-284400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283969-284137:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283565-283651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280931-280975:-1:exon

ZNF395
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZNF395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(368735..381151)
location: region:368735-381151:-1
so has part: feature:368735-381151:-1:exon
subclass of: SO_0000010

119949344
type: Gene
SIO_000068: ncbigene

position:368735:-1
position: 368735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381151:-1
position: 381151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368735-381151:-1:exon

ZNF395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZNF395
product: zinc finger protein 395
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771043.1
SIO_010081: ZNF395
subclass of: SO_0000673
so part of: ZNF395
location: complement(join(368735..368907,369029..369156,369403..369495,369869..370119,370352..370452,370621..370847,371358..371461,371865..372100,372389..372610,381090..381151))
location: region:368735-381151:-1
so has part: feature:381090-381151:-1:exon
so has part: feature:372389-372610:-1:exon
so has part: feature:371865-372100:-1:exon
so has part: feature:371358-371461:-1:exon
so has part: feature:370621-370847:-1:exon
so has part: feature:370352-370452:-1:exon
so has part: feature:369869-370119:-1:exon
so has part: feature:369403-369495:-1:exon
so has part: feature:369029-369156:-1:exon
so has part: feature:368735-368907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381090-381151:-1:exon

position:381090:-1
position: 381090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372389-372610:-1:exon

position:372389:-1
position: 372389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372610:-1
position: 372610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371865-372100:-1:exon

position:371865:-1
position: 371865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372100:-1
position: 372100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371358-371461:-1:exon

position:371358:-1
position: 371358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371461:-1
position: 371461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:370621-370847:-1:exon

position:370621:-1
position: 370621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370847:-1
position: 370847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370352-370452:-1:exon

position:370352:-1
position: 370352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370452:-1
position: 370452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369869-370119:-1:exon

position:369869:-1
position: 369869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370119:-1
position: 370119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:369403-369495:-1:exon

position:369403:-1
position: 369403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369495:-1
position: 369495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:369029-369156:-1:exon

position:369029:-1
position: 369029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369156:-1
position: 369156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368735-368907:-1:exon

position:368907:-1
position: 368907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZNF395
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 395
translation: MASVLSRRLGKRSLLGARVSVPGAAGDGQGLAELAGVVPPHPLPQGKDSAGQDPPLFPGPQLGTLLPGQKVLVPFEGQEWPALVELAGRPEDEVTVLMLEQGLRVSCKGDEVRPAEAWAGPPRALPPERGAPMSTALRSVSRNIDVPRSRRSDAVEMDEMMAAMVLTSLSCSPGMQSPPSSENPARAGCELWKDGGDVSDGGSSTSSGHWSVGSGISTPSPPRPEGSPKHPGSPPTDDGGFDTDPNAFLLEEPTPRKRKNSVKLLYKCLWPGCGKVLRSIVGIKRHVKTQHLGDGADSDQRKREEDFYYTDVQVKEEVVPAAAEPAPGSSLGSPGLLLPPPAQXPETPALETPLSLDTLSKSAPGSFWHIQADHAYQALPSVQIPVSPHIFTSISWAAATSSIPALSPVRSQTLSPSDSRPPPPPPPPPPPVMLKSPVIVASPPRAPSSTRKARGEAKKCRKVYGIERREQWCTACRWKKACQRFLD
SIO_010081: ZNF395
subclass of: SO_0000673
so part of: ZNF395
location: complement(join(368796..368907,369029..369156,369403..369495,369869..370119,370352..370452,370621..370847,371358..371461,371865..372100,372389..372598))
location: region:368796-372598:-1
so has part: feature:372389-372598:-1:exon
so has part: feature:371865-372100:-1:exon
so has part: feature:371358-371461:-1:exon
so has part: feature:370621-370847:-1:exon
so has part: feature:370352-370452:-1:exon
so has part: feature:369869-370119:-1:exon
so has part: feature:369403-369495:-1:exon
so has part: feature:369029-369156:-1:exon
so has part: feature:368796-368907:-1:exon

XP_038626971.1
type: Protein
SIO_000068: ncbiprotein

position:368796:-1
position: 368796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372598:-1
position: 372598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372389-372598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371865-372100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371358-371461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370621-370847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370352-370452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369869-370119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369403-369495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369029-369156:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368796-368907:-1:exon

PNOC
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PNOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(399337..405870)
location: region:399337-405870:-1
so has part: feature:399337-405870:-1:exon
subclass of: SO_0000010

119949584
type: Gene
SIO_000068: ncbigene

position:399337:-1
position: 399337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405870:-1
position: 405870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399337-405870:-1:exon

PNOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PNOC
product: prepronociceptin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038771448.1
SIO_010081: PNOC
subclass of: SO_0000673
so part of: PNOC
location: complement(join(399337..399498,399742..399828,405745..405870))
location: region:399337-405870:-1
so has part: feature:405745-405870:-1:exon
so has part: feature:399742-399828:-1:exon
so has part: feature:399337-399498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405745-405870:-1:exon

position:405745:-1
position: 405745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399742-399828:-1:exon

position:399742:-1
position: 399742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399828:-1
position: 399828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399337-399498:-1:exon

position:399498:-1
position: 399498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PNOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prepronociceptin
translation: MKTVVRGLVLLGLVSCALSHCQRECSWCKARLGPAVTTFSTTACILECQGLVPAQASWATCARIPRSAPGRKRFGGFTGARKSARKLANQKRVSEFVRQFVMLSLQSSERHNRLPAALRARAHL
SIO_010081: PNOC
subclass of: SO_0000673
so part of: PNOC
location: complement(join(399337..399498,399742..399828,405745..405870))
location: region:399337-405870:-1
so has part: feature:405745-405870:-1:exon
so has part: feature:399742-399828:-1:exon
so has part: feature:399337-399498:-1:exon

XP_038627376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405745-405870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399742-399828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399337-399498:-1:exon

ELP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ELP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412968..445063)
location: region:412968-445063:-1
so has part: feature:412968-445063:-1:exon
subclass of: SO_0000010

119949592
type: Gene
SIO_000068: ncbigene

position:412968:-1
position: 412968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445063:-1
position: 445063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412968-445063:-1:exon

ELP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ELP3
product: elongator acetyltransferase complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771459.1
SIO_010081: ELP3
subclass of: SO_0000673
so part of: ELP3
location: complement(join(412968..413374,417679..417760,420114..420341,421095..421160,421650..421740,421935..422128,426272..426398,426501..426662,436997..437151,437803..437871,438083..438146,438977..439047,439551..439689,439874..439973,445003..445063))
location: region:412968-445063:-1
so has part: feature:445003-445063:-1:exon
so has part: feature:439874-439973:-1:exon
so has part: feature:439551-439689:-1:exon
so has part: feature:438977-439047:-1:exon
so has part: feature:438083-438146:-1:exon
so has part: feature:437803-437871:-1:exon
so has part: feature:436997-437151:-1:exon
so has part: feature:426501-426662:-1:exon
so has part: feature:426272-426398:-1:exon
so has part: feature:421935-422128:-1:exon
so has part: feature:421650-421740:-1:exon
so has part: feature:421095-421160:-1:exon
so has part: feature:420114-420341:-1:exon
so has part: feature:417679-417760:-1:exon
so has part: feature:412968-413374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445003-445063:-1:exon

position:445003:-1
position: 445003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439874-439973:-1:exon

position:439874:-1
position: 439874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439973:-1
position: 439973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439551-439689:-1:exon

position:439551:-1
position: 439551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439689:-1
position: 439689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438977-439047:-1:exon

position:438977:-1
position: 438977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439047:-1
position: 439047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438083-438146:-1:exon

position:438083:-1
position: 438083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438146:-1
position: 438146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437803-437871:-1:exon

position:437803:-1
position: 437803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437871:-1
position: 437871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:436997-437151:-1:exon

position:436997:-1
position: 436997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437151:-1
position: 437151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:426501-426662:-1:exon

position:426501:-1
position: 426501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426662:-1
position: 426662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:426272-426398:-1:exon

position:426272:-1
position: 426272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426398:-1
position: 426398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:421935-422128:-1:exon

position:421935:-1
position: 421935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422128:-1
position: 422128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:421650-421740:-1:exon

position:421650:-1
position: 421650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421740:-1
position: 421740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:421095-421160:-1:exon

position:421095:-1
position: 421095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421160:-1
position: 421160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:420114-420341:-1:exon

position:420114:-1
position: 420114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420341:-1
position: 420341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:417679-417760:-1:exon

position:417679:-1
position: 417679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417760:-1
position: 417760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:412968-413374:-1:exon

position:413374:-1
position: 413374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ELP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongator complex protein 3
translation: MKQKRKGDLSSAELMILTIGDIIKQLVDAHEQGKDVNLNRLKTKTAAKYGLSAQPRLVDIIAAVPPQHRKVLVPKLKAKPIRTASGIAVVAVMCKPHRCPHLSFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRLEQLKQLGHSVDKVEFIVMGGTFMALPEDYRDYFIRNLHDALSGHTSSNVSEAVRYSERSLTRCIGITIETRPDYCLKRHLSDMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLAKDAGFKVVAHMMPDLPNVGLERDVQQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKSGRYKSYSPSTLVDLVARILALVPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALARMKDLGTECRDVRTREVGVQEIHHKVRPFQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSADTFRPELTGGVSIVRELHVYGSVVPVSSRDPSKFQHQGFGMLLMEEAERIAQEEHGARKIAVISGVGTRNYYRKMGYELQGPYMVKRLD
SIO_010081: ELP3
subclass of: SO_0000673
so part of: ELP3
location: complement(join(413298..413374,417679..417760,420114..420341,421095..421160,421650..421740,421935..422128,426272..426398,426501..426662,436997..437151,437803..437871,438083..438146,438977..439047,439551..439689,439874..439973,445003..445021))
location: region:413298-445021:-1
so has part: feature:445003-445021:-1:exon
so has part: feature:439874-439973:-1:exon
so has part: feature:439551-439689:-1:exon
so has part: feature:438977-439047:-1:exon
so has part: feature:438083-438146:-1:exon
so has part: feature:437803-437871:-1:exon
so has part: feature:436997-437151:-1:exon
so has part: feature:426501-426662:-1:exon
so has part: feature:426272-426398:-1:exon
so has part: feature:421935-422128:-1:exon
so has part: feature:421650-421740:-1:exon
so has part: feature:421095-421160:-1:exon
so has part: feature:420114-420341:-1:exon
so has part: feature:417679-417760:-1:exon
so has part: feature:413298-413374:-1:exon

XP_038627387.1
type: Protein
SIO_000068: ncbiprotein

position:413298:-1
position: 413298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445021:-1
position: 445021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445003-445021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439874-439973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439551-439689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438977-439047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438083-438146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437803-437871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436997-437151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426501-426662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426272-426398:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421935-422128:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421650-421740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421095-421160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:420114-420341:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:417679-417760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:413298-413374:-1:exon

FBXO16
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FBXO16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449569..463111)
location: region:449569-463111:-1
so has part: feature:449569-463111:-1:exon
subclass of: SO_0000010

119949467
type: Gene
SIO_000068: ncbigene

position:449569:-1
position: 449569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463111:-1
position: 463111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449569-463111:-1:exon

FBXO16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FBXO16
product: F-box protein 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038771261.1
SIO_010081: FBXO16
subclass of: SO_0000673
so part of: FBXO16
location: complement(join(449569..450001,451254..451359,451549..451772,452874..453038,455524..455730,458920..458955,461428..461556,463072..463111))
location: region:449569-463111:-1
so has part: feature:463072-463111:-1:exon
so has part: feature:461428-461556:-1:exon
so has part: feature:458920-458955:-1:exon
so has part: feature:455524-455730:-1:exon
so has part: feature:452874-453038:-1:exon
so has part: feature:451549-451772:-1:exon
so has part: feature:451254-451359:-1:exon
so has part: feature:449569-450001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463072-463111:-1:exon

position:463072:-1
position: 463072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461428-461556:-1:exon

position:461428:-1
position: 461428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461556:-1
position: 461556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458920-458955:-1:exon

position:458920:-1
position: 458920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458955:-1
position: 458955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455524-455730:-1:exon

position:455524:-1
position: 455524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455730:-1
position: 455730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:452874-453038:-1:exon

position:452874:-1
position: 452874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453038:-1
position: 453038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451549-451772:-1:exon

position:451549:-1
position: 451549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451772:-1
position: 451772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451254-451359:-1:exon

position:451254:-1
position: 451254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451359:-1
position: 451359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449569-450001:-1:exon

position:450001:-1
position: 450001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FBXO16
product: F-box protein 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038771260.1
SIO_010081: FBXO16
subclass of: SO_0000673
so part of: FBXO16
location: complement(join(449569..450001,451254..451359,451543..451772,452874..453038,455524..455730,458920..458955,461428..461556,463072..463103))
location: region:449569-463103:-1
so has part: feature:463072-463103:-1:exon
so has part: feature:461428-461556:-1:exon
so has part: feature:458920-458955:-1:exon
so has part: feature:455524-455730:-1:exon
so has part: feature:452874-453038:-1:exon
so has part: feature:451543-451772:-1:exon
so has part: feature:451254-451359:-1:exon
so has part: feature:449569-450001:-1:exon

position:463103:-1
position: 463103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463072-463103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:461428-461556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458920-458955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455524-455730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:452874-453038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451543-451772:-1:exon

position:451543:-1
position: 451543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451254-451359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449569-450001:-1:exon

FBXO16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FBXO16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 16 isoform X2
translation: MAFAPPRITDGPKMQTKRSTWTPLNHQLMNDKVFEERRVLLGKWFDKWTDGQRRRVLTDLFERCSLAQQRFCGRELQERVPAEAQDFTTRLPRALALHIFSFLDPRSLCRCAQVSWPWKNLAELDQLWTPKCLRFGWCPAVSPRPREQGVWKDHYVDMVKRLHVTGPTTPPREDLEIPDVRPVARGTPEGPPSARRWASSWPPKQASRAKRDLPPWRSTDRHPTDTIRFNYLDNQGLGEPARRRKKGGGMTPDISRQSYEKKKKLGSGSRKLRKVKSLMSLATDPRSAPRAPAYPQVHPPGTSVGGQAPRHQNPPRPPRSEFLTGGWGSASLAWVQPTP
SIO_010081: FBXO16
subclass of: SO_0000673
so part of: FBXO16
location: complement(join(449816..450001,451254..451359,451549..451772,452874..453038,455524..455730,458920..458955,461428..461523))
location: region:449816-461523:-1
so has part: feature:461428-461523:-1:exon
so has part: feature:458920-458955:-1:exon
so has part: feature:455524-455730:-1:exon
so has part: feature:452874-453038:-1:exon
so has part: feature:451549-451772:-1:exon
so has part: feature:451254-451359:-1:exon
so has part: feature:449816-450001:-1:exon

XP_038627189.1
type: Protein
SIO_000068: ncbiprotein

position:449816:-1
position: 449816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461523:-1
position: 461523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461428-461523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458920-458955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455524-455730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452874-453038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451549-451772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451254-451359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449816-450001:-1:exon

FBXO16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FBXO16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 16 isoform X1
translation: MAFAPPRITDGPKMQTKRSTWTPLNHQLMNDKVFEERRVLLGKWFDKWTDGQRRRVLTDLFERCSLAQQRFCGRELQERVPAEAQDFTTRLPRALALHIFSFLDPRSLCRCAQVSWPWKNLAELDQLWTPKCLRFGWCPAVSPRPREQGVWKDHYVDMVKRLHVTGPTTPPREDLEIPDVRPVARGTPEGPPSARRWASSWPPKQASRAKRDLPPWRSTDRHPTDTIRFNYLDNQGLGEPARRQGRKKGGGMTPDISRQSYEKKKKLGSGSRKLRKVKSLMSLATDPRSAPRAPAYPQVHPPGTSVGGQAPRHQNPPRPPRSEFLTGGWGSASLAWVQPTP
SIO_010081: FBXO16
subclass of: SO_0000673
so part of: FBXO16
location: complement(join(449816..450001,451254..451359,451543..451772,452874..453038,455524..455730,458920..458955,461428..461523))
location: region:449816-461523:-1
so has part: feature:461428-461523:-1:exon
so has part: feature:458920-458955:-1:exon
so has part: feature:455524-455730:-1:exon
so has part: feature:452874-453038:-1:exon
so has part: feature:451543-451772:-1:exon
so has part: feature:451254-451359:-1:exon
so has part: feature:449816-450001:-1:exon

XP_038627188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461428-461523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458920-458955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455524-455730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452874-453038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451543-451772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451254-451359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449816-450001:-1:exon

FZD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FZD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 475763..524028
location: region:475763-524028:1
so has part: feature:475763-524028:1:exon
subclass of: SO_0000010

119949371
type: Gene
SIO_000068: ncbigene

position:475763:1
position: 475763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524028:1
position: 524028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475763-524028:1:exon

FZD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FZD3
product: frizzled class receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771099.1
SIO_010081: FZD3
subclass of: SO_0000673
so part of: FZD3
location: join(475763..475818,491374..491912,506611..506807,507969..508986,516604..516752,517950..518183,519514..524028)
location: region:475763-524028:1
so has part: feature:475763-475818:1:exon
so has part: feature:491374-491912:1:exon
so has part: feature:506611-506807:1:exon
so has part: feature:507969-508986:1:exon
so has part: feature:516604-516752:1:exon
so has part: feature:517950-518183:1:exon
so has part: feature:519514-524028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475763-475818:1:exon

position:475818:1
position: 475818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491374-491912:1:exon

position:491374:1
position: 491374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491912:1
position: 491912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:506611-506807:1:exon

position:506611:1
position: 506611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506807:1
position: 506807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507969-508986:1:exon

position:507969:1
position: 507969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508986:1
position: 508986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516604-516752:1:exon

position:516604:1
position: 516604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516752:1
position: 516752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:517950-518183:1:exon

position:517950:1
position: 517950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518183:1
position: 518183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:519514-524028:1:exon

position:519514:1
position: 519514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FZD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FZD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-3
translation: MPFVSPGQRSPVGARRASPDECPCGPETEGGGPAGDTGCPSARPRAAVESGRAEGQSPDPGRMAGSWLLFSLWPWVLLVAQAGGHSLFSCEPITLRMCQDLPYNSTFMPNLLNHYDQQTAALAMEPFHPMVNLECSRDFRPFLCALYAPVCMEYGRVSLPCRRLCQRAFSECAKLMEMFGVSWPEDMECSRFPDCDEPYPRPVDLNVAAEPTAATPAAVQRDYGFWCPRELKTEPALGYSFLRVRDCSPPCPNMYFRREELAFARYFIGLISIVCLSATLFTFLTFLIDVRRFRYPERPIIFYAVCYMMVSLIFFIGFLLEDRVACNAARPAQYRAATVTQGSHNKACTLLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHASAWGIPGTLTIVLLAMNKIEGDNISGVCFVGLYDVDALRYFVLAPLCLDVAVGVSLLLAGIISLNRVRIEIPLEKENQDKLVKFMIRIGVFSVLYLVPLLVVIGCYFYEQAYRGMWETTWVRERCRDYHIPCPYQITQMSRPDLILFLMKYLMALIVGIPSVFWVGSKKTCFEWASFFHGRRKKEAVNESRQVLQEPDFAQSLLRDPNTPIIRKSRGTSTQGTSTHASSTQLAMVDEQRSKAGSVHSKMSSYHGSLHRSRDGRYTPCSYRGAEERLAHGSTSRLTDLSRPSSSHRLNEPSRPGSSRDLSGNPLTHVTHGSSVNRVIEEDGASA
SIO_010081: FZD3
subclass of: SO_0000673
so part of: FZD3
location: join(491538..491912,506611..506807,507969..508986,516604..516752,517950..518183,519514..519727)
location: region:491538-519727:1
so has part: feature:491538-491912:1:exon
so has part: feature:506611-506807:1:exon
so has part: feature:507969-508986:1:exon
so has part: feature:516604-516752:1:exon
so has part: feature:517950-518183:1:exon
so has part: feature:519514-519727:1:exon

XP_038627027.1
type: Protein
SIO_000068: ncbiprotein

position:491538:1
position: 491538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519727:1
position: 519727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491538-491912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506611-506807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507969-508986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516604-516752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517950-518183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519514-519727:1:exon

EXTL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EXTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547863..552648
location: region:547863-552648:1
so has part: feature:547863-552648:1:exon
subclass of: SO_0000010

119949585
type: Gene
SIO_000068: ncbigene

position:547863:1
position: 547863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552648:1
position: 552648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547863-552648:1:exon

EXTL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EXTL3
product: exostosin like glycosyltransferase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038771449.1
SIO_010081: EXTL3
subclass of: SO_0000673
so part of: EXTL3
location: join(547863..550082,550629..550756,551110..551254,551619..551747,552037..552648)
location: region:547863-552648:1
so has part: feature:547863-550082:1:exon
so has part: feature:550629-550756:1:exon
so has part: feature:551110-551254:1:exon
so has part: feature:551619-551747:1:exon
so has part: feature:552037-552648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547863-550082:1:exon

position:550082:1
position: 550082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550629-550756:1:exon

position:550629:1
position: 550629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550756:1
position: 550756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551110-551254:1:exon

position:551110:1
position: 551110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551254:1
position: 551254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551619-551747:1:exon

position:551619:1
position: 551619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551747:1
position: 551747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552037-552648:1:exon

position:552037:1
position: 552037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EXTL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EXTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 3
translation: MWRGGGPAAAAAGAATGAAQPWLLRLSSRVRLTWLSFTLLVILVFFPLIAHHYLTTLDEADEAGKRLFGPRAGGELCEARHVLDLCRIRESVSEELLTLEAKRQELNGEIGRLNVKAEACRKSIEGAKQDLLQLRSVISQTEHSYKELVAQNQPKLSLPVRLLPDKEDPGLPPPPPRRSRACRLHDCFDYSRCPLTSGFPVFVYDSERPPLAARLDPLVKQAFEAAARADPYVTRDPDVACLYVVLAGELREPGPPGELERQLRALPHWRADGHNHLVLHLARRPGGPDPLANVSTGRAMVAQATFHAARYRPGFDLVVSPLVHAMAEPNFLEIPPQAPAKRKYLFTFQGERVEAPRPPGGGGPRGGRGAGAEAEAEADDDEEEEEEGRGGAAAPADYDDRIVATLKAVQDSKLDPVLAEFTCKLPAQPGLPGEWALCGRREDRLRLLRASTFALIIAPGDPRLLATAGAALRLFEALEAGAVPVVLGEQLRLPYHDVLRWSEAALLLPKARVTEAHFLLRSLSDGDLLAMRRQGRFLWETYLATAASVFSTVLAVVRTRLQIPAAPIRDEAAAEIPHRSGKAAGTDNANLADNGDLDLGPVETEPPYASPRFLRNFTLTAAHLHRSWNTPPGPFHLFPYTPFDPALPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPREQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPRLPSEDLLWPDIGVPVVVVRTEKNSLNNRFLPWDAIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDVPHQSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDVVDEYINCEDIAMNFLVSHITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVRVYGYMPLLYTQFRVDSVLFKTRLPHDKTKCFKFI
SIO_010081: EXTL3
subclass of: SO_0000673
so part of: EXTL3
location: join(547863..550082,550629..550756,551110..551254,551619..551747,552037..552246)
location: region:547863-552246:1
so has part: feature:547863-550082:1:exon
so has part: feature:550629-550756:1:exon
so has part: feature:551110-551254:1:exon
so has part: feature:551619-551747:1:exon
so has part: feature:552037-552246:1:exon

XP_038627377.1
type: Protein
SIO_000068: ncbiprotein

position:552246:1
position: 552246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547863-550082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550629-550756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551110-551254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551619-551747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552037-552246:1:exon

INTS9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: INTS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553945..585175)
location: region:553945-585175:-1
so has part: feature:553945-585175:-1:exon
subclass of: SO_0000010

119949252
type: Gene
SIO_000068: ncbigene

position:553945:-1
position: 553945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585175:-1
position: 585175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553945-585175:-1:exon

INTS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: INTS9
product: integrator complex subunit 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038770859.1
SIO_010081: INTS9
subclass of: SO_0000673
so part of: INTS9
location: complement(join(553945..554659,555567..555704,556048..556146,556509..556676,557146..557270,557441..557612,558348..558408,560230..560410,561479..561590,566530..566664,568135..568255,571339..571425,572503..572642,574045..574107,575003..575063,577943..578070,585167..585175))
location: region:553945-585175:-1
so has part: feature:585167-585175:-1:exon
so has part: feature:577943-578070:-1:exon
so has part: feature:575003-575063:-1:exon
so has part: feature:574045-574107:-1:exon
so has part: feature:572503-572642:-1:exon
so has part: feature:571339-571425:-1:exon
so has part: feature:568135-568255:-1:exon
so has part: feature:566530-566664:-1:exon
so has part: feature:561479-561590:-1:exon
so has part: feature:560230-560410:-1:exon
so has part: feature:558348-558408:-1:exon
so has part: feature:557441-557612:-1:exon
so has part: feature:557146-557270:-1:exon
so has part: feature:556509-556676:-1:exon
so has part: feature:556048-556146:-1:exon
so has part: feature:555567-555704:-1:exon
so has part: feature:553945-554659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585167-585175:-1:exon

position:585167:-1
position: 585167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577943-578070:-1:exon

position:577943:-1
position: 577943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578070:-1
position: 578070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:575003-575063:-1:exon

position:575003:-1
position: 575003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575063:-1
position: 575063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574045-574107:-1:exon

position:574045:-1
position: 574045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574107:-1
position: 574107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572503-572642:-1:exon

position:572503:-1
position: 572503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572642:-1
position: 572642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:571339-571425:-1:exon

position:571339:-1
position: 571339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571425:-1
position: 571425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:568135-568255:-1:exon

position:568135:-1
position: 568135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568255:-1
position: 568255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:566530-566664:-1:exon

position:566530:-1
position: 566530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566664:-1
position: 566664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:561479-561590:-1:exon

position:561479:-1
position: 561479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561590:-1
position: 561590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:560230-560410:-1:exon

position:560230:-1
position: 560230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560410:-1
position: 560410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:558348-558408:-1:exon

position:558348:-1
position: 558348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558408:-1
position: 558408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:557441-557612:-1:exon

position:557441:-1
position: 557441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557612:-1
position: 557612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:557146-557270:-1:exon

position:557146:-1
position: 557146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557270:-1
position: 557270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:556509-556676:-1:exon

position:556509:-1
position: 556509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556676:-1
position: 556676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:556048-556146:-1:exon

position:556048:-1
position: 556048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556146:-1
position: 556146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555567-555704:-1:exon

position:555567:-1
position: 555567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555704:-1
position: 555704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:553945-554659:-1:exon

position:554659:-1
position: 554659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INTS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: INTS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 9
translation: MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLSFLPLPLVQSPRLSNLPGWVLKDGNTFLDKELKECSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFTGTVYATEPTVQIGRLLMEELVNFIERVPKAQSACLWKNKEVQRLLPAPLKDAVEVATWRRCYTMPEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPTANPDGMVGEFCSSLAMTVRNGGNVLVPCYPSGVIYDLLECLYQYMDSAGLSNVPLYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAELIQTNKLKHYPSIPGDFSNDFKQPCVVFTGHPSLRCGDVVHFMELWGRSSLNTVIFTEPDFSYLEALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQAHRVDLVISCHPPAMSYRRAEVLTLPFKRRYEKIEIVPELADSLVPMEIKPGISLATVSAMLHTKDNKHVLQPPPKSCPAPPGKKRKRVTDDIPDCKPLKPLLSGSIPVDQFVQALEKHGFSDVKVEDTAKGHIVLLQEAETLIQIEEDSTHIICDNDEPLRGRLRDLVLNFLQKF
SIO_010081: INTS9
subclass of: SO_0000673
so part of: INTS9
location: complement(join(554483..554659,555567..555704,556048..556146,556509..556676,557146..557270,557441..557612,558348..558408,560230..560410,561479..561590,566530..566664,568135..568255,571339..571425,572503..572642,574045..574107,575003..575063,577943..578070,585167..585175))
location: region:554483-585175:-1
so has part: feature:585167-585175:-1:exon
so has part: feature:577943-578070:-1:exon
so has part: feature:575003-575063:-1:exon
so has part: feature:574045-574107:-1:exon
so has part: feature:572503-572642:-1:exon
so has part: feature:571339-571425:-1:exon
so has part: feature:568135-568255:-1:exon
so has part: feature:566530-566664:-1:exon
so has part: feature:561479-561590:-1:exon
so has part: feature:560230-560410:-1:exon
so has part: feature:558348-558408:-1:exon
so has part: feature:557441-557612:-1:exon
so has part: feature:557146-557270:-1:exon
so has part: feature:556509-556676:-1:exon
so has part: feature:556048-556146:-1:exon
so has part: feature:555567-555704:-1:exon
so has part: feature:554483-554659:-1:exon

XP_038626787.1
type: Protein
SIO_000068: ncbiprotein

position:554483:-1
position: 554483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585167-585175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577943-578070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575003-575063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574045-574107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572503-572642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571339-571425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:568135-568255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566530-566664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561479-561590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560230-560410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558348-558408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557441-557612:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557146-557270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:556509-556676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:556048-556146:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555567-555704:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:554483-554659:-1:exon

HMBOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 585638..652459
location: region:585638-652459:1
so has part: feature:585638-652459:1:exon
subclass of: SO_0000010

119949487
type: Gene
SIO_000068: ncbigene

position:585638:1
position: 585638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652459:1
position: 652459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585638-652459:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771292.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585638..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648986,650516..650599)
location: region:585638-650599:1
so has part: feature:585638-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648986:1:exon
so has part: feature:650516-650599:1:exon

position:650599:1
position: 650599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585638-585744:1:exon

position:585744:1
position: 585744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

position:615110:1
position: 615110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615194:1
position: 615194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

position:622152:1
position: 622152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622628:1
position: 622628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

position:629645:1
position: 629645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629730:1
position: 629730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

position:635243:1
position: 635243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635353:1
position: 635353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

position:637220:1
position: 637220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637373:1
position: 637373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

position:647519:1
position: 647519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647601:1
position: 647601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

position:647955:1
position: 647955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648050:1
position: 648050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648545-648639:1:exon

position:648545:1
position: 648545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648639:1
position: 648639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648986:1:exon

position:648882:1
position: 648882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648986:1
position: 648986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:650516-650599:1:exon

position:650516:1
position: 650516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771293.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585638..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,648882..648986,650516..650599)
location: region:585638-650599:1
so has part: feature:585638-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:648882-648986:1:exon
so has part: feature:650516-650599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585638-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648548-648639:1:exon

position:648548:1
position: 648548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:650516-650599:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771294.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585638..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,648882..648986,650516..650599)
location: region:585638-650599:1
so has part: feature:585638-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:648882-648986:1:exon
so has part: feature:650516-650599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585638-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648551-648639:1:exon

position:648551:1
position: 648551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:650516-650599:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771289.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,650516..652459)
location: region:585639-652459:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:650516-652459:1:exon

position:585639:1
position: 585639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648551-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-652459:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771283.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-652458:1:exon

position:652458:1
position: 652458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648953:1:exon

position:648953:1
position: 648953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771287.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:650516-652458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771284.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,648882..648953,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-652458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648548-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771288.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:650516-652458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648548-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038771285.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,615110..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,648882..648953,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:615110-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-652458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615110-615194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648551-648639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038771286.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(585639..585744,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..652458)
location: region:585639-652458:1
so has part: feature:585639-585744:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-652458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585639-585744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HMBOX1
product: homeobox containing 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771290.1
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615108..615194,622181..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..652458)
location: region:615108-652458:1
so has part: feature:615108-615194:1:exon
so has part: feature:622181-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-652458:1:exon

position:615108:1
position: 615108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615108-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622181-622628:1:exon

position:622181:1
position: 622181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-652458:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X1
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-650653:1:exon

XP_038627211.1
type: Protein
SIO_000068: ncbiprotein

position:615172:1
position: 615172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650653:1
position: 650653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X5
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:650516-650653:1:exon

XP_038627215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X2
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,648882..648953,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-650653:1:exon

XP_038627212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648548-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X6
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:650516-650653:1:exon

XP_038627216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648548-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X3
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,648882..648953,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-650653:1:exon

XP_038627213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648551-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X7
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,650516..650653)
location: region:615172-650653:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:650516-650653:1:exon

XP_038627217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648551-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X9
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKVEEERRI
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648977)
location: region:615172-648977:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648977:1:exon

XP_038627220.1
type: Protein
SIO_000068: ncbiprotein

position:648977:1
position: 648977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648977:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X10
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKVEEERRI
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648548..648639,648882..648977)
location: region:615172-648977:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648548-648639:1:exon
so has part: feature:648882-648977:1:exon

XP_038627221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648548-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648977:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X11
translation: MLSSFPVLLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKVEEERRI
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(615172..615194,622152..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648551..648639,648882..648977)
location: region:615172-648977:1
so has part: feature:615172-615194:1:exon
so has part: feature:622152-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648551-648639:1:exon
so has part: feature:648882-648977:1:exon

XP_038627222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615172-615194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622152-622628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648551-648639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648882-648977:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X4
translation: MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(622165..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..650653)
location: region:622165-650653:1
so has part: feature:622165-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-650653:1:exon

XP_038627214.1
type: Protein
SIO_000068: ncbiprotein

position:622165:1
position: 622165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622165-622628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650516-650653:1:exon

HMBOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HMBOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-containing protein 1 isoform X8
translation: MTKPEVLHALETLDRLDQEHSDKFGRRAGYAGGPYASSAGGVPASSSTATAATQTRPSGMSPSPSNSYDTSPQPCTTNQNGREGAECLVASNGKLSPPRYHGNSLGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPVEDPEWRQTPPPITATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAAVNHTILALARQGAGEIKTETLDDD
SIO_010081: HMBOX1
subclass of: SO_0000673
so part of: HMBOX1
location: join(622240..622628,629645..629730,635243..635353,637220..637373,647519..647601,647955..648050,648545..648639,648882..648953,650516..650653)
location: region:622240-650653:1
so has part: feature:622240-622628:1:exon
so has part: feature:629645-629730:1:exon
so has part: feature:635243-635353:1:exon
so has part: feature:637220-637373:1:exon
so has part: feature:647519-647601:1:exon
so has part: feature:647955-648050:1:exon
so has part: feature:648545-648639:1:exon
so has part: feature:648882-648953:1:exon
so has part: feature:650516-650653:1:exon

XP_038627218.1
type: Protein
SIO_000068: ncbiprotein

position:622240:1
position: 622240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622240-622628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629645-629730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635243-635353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637220-637373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647519-647601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647955-648050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648545-648639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648882-648953:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650516-650653:1:exon

KIF13B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: KIF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661328..743361)
location: region:661328-743361:-1
so has part: feature:661328-743361:-1:exon
subclass of: SO_0000010

119949134
type: Gene
SIO_000068: ncbigene

position:661328:-1
position: 661328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743361:-1
position: 743361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661328-743361:-1:exon

KIF13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: KIF13B
product: kinesin family member 13B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770650.1
SIO_010081: KIF13B
subclass of: SO_0000673
so part of: KIF13B
location: complement(join(661328..663615,664144..665032,666511..666609,669004..669149,670287..670398,670845..670898,671088..671165,672413..672559,672997..673089,675582..675758,676416..676540,677727..677782,678604..678730,680311..680410,680563..680592,681110..681256,681434..681566,682544..682701,684018..684188,684685..684798,685204..685353,686673..686822,687350..687512,689242..689488,690325..690524,691866..691952,693270..693400,694194..694328,695483..695593,696423..696635,698004..698115,698565..698677,699399..699533,700170..700257,701176..701356,702208..702300,704178..704238,705270..705282,729527..729620,743300..743361))
location: region:661328-743361:-1
so has part: feature:743300-743361:-1:exon
so has part: feature:729527-729620:-1:exon
so has part: feature:705270-705282:-1:exon
so has part: feature:704178-704238:-1:exon
so has part: feature:702208-702300:-1:exon
so has part: feature:701176-701356:-1:exon
so has part: feature:700170-700257:-1:exon
so has part: feature:699399-699533:-1:exon
so has part: feature:698565-698677:-1:exon
so has part: feature:698004-698115:-1:exon
so has part: feature:696423-696635:-1:exon
so has part: feature:695483-695593:-1:exon
so has part: feature:694194-694328:-1:exon
so has part: feature:693270-693400:-1:exon
so has part: feature:691866-691952:-1:exon
so has part: feature:690325-690524:-1:exon
so has part: feature:689242-689488:-1:exon
so has part: feature:687350-687512:-1:exon
so has part: feature:686673-686822:-1:exon
so has part: feature:685204-685353:-1:exon
so has part: feature:684685-684798:-1:exon
so has part: feature:684018-684188:-1:exon
so has part: feature:682544-682701:-1:exon
so has part: feature:681434-681566:-1:exon
so has part: feature:681110-681256:-1:exon
so has part: feature:680563-680592:-1:exon
so has part: feature:680311-680410:-1:exon
so has part: feature:678604-678730:-1:exon
so has part: feature:677727-677782:-1:exon
so has part: feature:676416-676540:-1:exon
so has part: feature:675582-675758:-1:exon
so has part: feature:672997-673089:-1:exon
so has part: feature:672413-672559:-1:exon
so has part: feature:671088-671165:-1:exon
so has part: feature:670845-670898:-1:exon
so has part: feature:670287-670398:-1:exon
so has part: feature:669004-669149:-1:exon
so has part: feature:666511-666609:-1:exon
so has part: feature:664144-665032:-1:exon
so has part: feature:661328-663615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743300-743361:-1:exon

position:743300:-1
position: 743300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729527-729620:-1:exon

position:729527:-1
position: 729527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729620:-1
position: 729620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705270-705282:-1:exon

position:705270:-1
position: 705270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705282:-1
position: 705282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704178-704238:-1:exon

position:704178:-1
position: 704178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704238:-1
position: 704238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:702208-702300:-1:exon

position:702208:-1
position: 702208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702300:-1
position: 702300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:701176-701356:-1:exon

position:701176:-1
position: 701176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701356:-1
position: 701356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:700170-700257:-1:exon

position:700170:-1
position: 700170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700257:-1
position: 700257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:699399-699533:-1:exon

position:699399:-1
position: 699399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699533:-1
position: 699533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698565-698677:-1:exon

position:698565:-1
position: 698565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698677:-1
position: 698677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:698004-698115:-1:exon

position:698004:-1
position: 698004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698115:-1
position: 698115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:696423-696635:-1:exon

position:696423:-1
position: 696423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696635:-1
position: 696635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:695483-695593:-1:exon

position:695483:-1
position: 695483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695593:-1
position: 695593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:694194-694328:-1:exon

position:694194:-1
position: 694194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694328:-1
position: 694328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:693270-693400:-1:exon

position:693270:-1
position: 693270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693400:-1
position: 693400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:691866-691952:-1:exon

position:691866:-1
position: 691866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691952:-1
position: 691952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:690325-690524:-1:exon

position:690325:-1
position: 690325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690524:-1
position: 690524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:689242-689488:-1:exon

position:689242:-1
position: 689242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689488:-1
position: 689488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:687350-687512:-1:exon

position:687350:-1
position: 687350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687512:-1
position: 687512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:686673-686822:-1:exon

position:686673:-1
position: 686673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686822:-1
position: 686822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:685204-685353:-1:exon

position:685204:-1
position: 685204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685353:-1
position: 685353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:684685-684798:-1:exon

position:684685:-1
position: 684685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684798:-1
position: 684798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:684018-684188:-1:exon

position:684018:-1
position: 684018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684188:-1
position: 684188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:682544-682701:-1:exon

position:682544:-1
position: 682544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682701:-1
position: 682701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:681434-681566:-1:exon

position:681434:-1
position: 681434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681566:-1
position: 681566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:681110-681256:-1:exon

position:681110:-1
position: 681110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681256:-1
position: 681256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:680563-680592:-1:exon

position:680563:-1
position: 680563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680592:-1
position: 680592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:680311-680410:-1:exon

position:680311:-1
position: 680311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680410:-1
position: 680410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:678604-678730:-1:exon

position:678604:-1
position: 678604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678730:-1
position: 678730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:677727-677782:-1:exon

position:677727:-1
position: 677727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677782:-1
position: 677782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:676416-676540:-1:exon

position:676416:-1
position: 676416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676540:-1
position: 676540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:675582-675758:-1:exon

position:675582:-1
position: 675582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675758:-1
position: 675758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:672997-673089:-1:exon

position:672997:-1
position: 672997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673089:-1
position: 673089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:672413-672559:-1:exon

position:672413:-1
position: 672413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672559:-1
position: 672559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:671088-671165:-1:exon

position:671088:-1
position: 671088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671165:-1
position: 671165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:670845-670898:-1:exon

position:670845:-1
position: 670845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670898:-1
position: 670898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:670287-670398:-1:exon

position:670287:-1
position: 670287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670398:-1
position: 670398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:669004-669149:-1:exon

position:669004:-1
position: 669004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669149:-1
position: 669149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:666511-666609:-1:exon

position:666511:-1
position: 666511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666609:-1
position: 666609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:664144-665032:-1:exon

position:664144:-1
position: 664144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665032:-1
position: 665032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:661328-663615:-1:exon

position:663615:-1
position: 663615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: KIF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF13B
translation: MGDSKVKVAVRVRPMNRREFDLHTKCVVDVDANRVILHPVNPNLTKGDARGQPKVFAYDHCFWSMDENVQEKYAGQDVVFQCLGEPVLQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGLIPKLCSGLFERAQKEENQEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHNVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKIILTHTLYDVQSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALAEQGVGKNRNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDESLSTLRYADRAKNIVNHAVVNEDPNARIIRDLREEVDKLREQLSKAEAMKSPELKDRLEESEKLIQEMTVTWEEKLRKTEEIAQERQKQLESLGISLQSSGIKVGDDKCFLVNLNADPALNELLVYYLKEHTLIGSADSQDIQLCGMGIHPEHCVIDITPEGHVMLTPQRSTRTFVNGSAVSSPTQLHHGDRILWGNNHFFRLNLPKKKKKAEKEQGDEEGERENSIRSGSDQADADGDSSSSEVSSESHFNFEYAQLEVTMKALGTNDPTQSILHSLAQQHEEEKRSALERQRLMYERELDQLRRRLSPEKQQPQQPPTYHHHHHHRSPDRFSLHSPNAQMRSRQWTEEREATLTHSLRKLREQIVKANLLVREAGFIAEELDRRTEYKVTLQIPASSLDANRKRGAVLSEPAIQVRRKGKGKQIWALEKLDNRLLDMRDLYQEWKEFDDDNPGLSRSYLTRADPFYDEQENHSLIGVANVFLESLFYDVKLQYAVPIVNQKGEVAGRLHVEVVRVSGAIRERMAGGDDGEEAASEAKLVCMVKILQATGLPQHLSNFVFCKYSFWDQPEPVRVAPEVDTSSSPTSKEPQCMVVFDHCHEFSANISEDFIEYLSEGALAIEVFGHKVNDPRRNPALWDLGIIQAKTRSLRDRWSEVTRKVEFWVQILEQNENGEYVPVEVLPAKDVQTGGIFQLRQGQSRRVQVEVKSVQESGTLPLMEEAILGVGIGCVQIKPVRTLRAQEGFQEEREDMDSYQDRDLERLRRKWLNTLTKRQEYLDQQLQKLVSKADKTEDDADREAQLLEMRLTLTEERNAVLVPSAGSGIPGSPAEWTPGPGMETHIPVIFLDLNADDFSSQDNLDEPEPGGWDATLSGEEEEEFFELQIVKHYDGEAKAESSWDSGVHNCPQLSKGIAVDERAFLIVRVTVQLSHPADMQLVLRKRICVNVQGRQGFAQSLLKKMSPRSLIPGCGVTVEIVSNIPEDAQGAEEREALARMAANVEDAADAEAYIEKYLRSMLAVENLLTLDRLRQEVAVKEQLTGKGKLHRRSVSSPSVNRLSGSRQDLTPRFSLGSNKGRWESQQDVSQTALTGGLTSAHSSPSGSPQPSQSQGPGPDGEAGNKAVSSPNPIKSSTPHMPKLLKSLFPARDDRKGRQTSPLAQQVSPRVPAQPVAVEIGAVKAGVTEAGAMEAGDPQAPGDKVQTTEPPGPATGVDQPCRMAIQQPGAADVQTRDPQEGPPSPLSEASSGYFSHSVSTATLSDVLVAGADPAGLGGPSPGTPPTPLSQGAPEAGGLSFPGERPAPGGRKATPAFPGQHSDVHGSTGGKSEAPTRDPDHGTVTMEPETGHSPRPTSLTGGHPGRPGAPTEPLSRLEPTPGPQRQPPASPFQIQKVRTSELMSFSGMLGGDPGRSSGEDGDGERSRLAVGGVAGEQPDAVSDSEETDEVPDWLKVGESVTVGSSKTGTKAGVVRYVGPTDFQEGTWIGVELDQPSGRNDGSVGGKQYFKCSPGHGLLVKPGRVRRATGPVRRRGSGLRLQGALPDKRRSGHFSGSASNLASLTALAKAEGGLGPRAERSHRPAENRKSWTS
SIO_010081: KIF13B
subclass of: SO_0000673
so part of: KIF13B
location: complement(join(663326..663615,664144..665032,666511..666609,669004..669149,670287..670398,670845..670898,671088..671165,672413..672559,672997..673089,675582..675758,676416..676540,677727..677782,678604..678730,680311..680410,680563..680592,681110..681256,681434..681566,682544..682701,684018..684188,684685..684798,685204..685353,686673..686822,687350..687512,689242..689488,690325..690524,691866..691952,693270..693400,694194..694328,695483..695593,696423..696635,698004..698115,698565..698677,699399..699533,700170..700257,701176..701356,702208..702300,704178..704238,705270..705282,729527..729620,743300..743354))
location: region:663326-743354:-1
so has part: feature:743300-743354:-1:exon
so has part: feature:729527-729620:-1:exon
so has part: feature:705270-705282:-1:exon
so has part: feature:704178-704238:-1:exon
so has part: feature:702208-702300:-1:exon
so has part: feature:701176-701356:-1:exon
so has part: feature:700170-700257:-1:exon
so has part: feature:699399-699533:-1:exon
so has part: feature:698565-698677:-1:exon
so has part: feature:698004-698115:-1:exon
so has part: feature:696423-696635:-1:exon
so has part: feature:695483-695593:-1:exon
so has part: feature:694194-694328:-1:exon
so has part: feature:693270-693400:-1:exon
so has part: feature:691866-691952:-1:exon
so has part: feature:690325-690524:-1:exon
so has part: feature:689242-689488:-1:exon
so has part: feature:687350-687512:-1:exon
so has part: feature:686673-686822:-1:exon
so has part: feature:685204-685353:-1:exon
so has part: feature:684685-684798:-1:exon
so has part: feature:684018-684188:-1:exon
so has part: feature:682544-682701:-1:exon
so has part: feature:681434-681566:-1:exon
so has part: feature:681110-681256:-1:exon
so has part: feature:680563-680592:-1:exon
so has part: feature:680311-680410:-1:exon
so has part: feature:678604-678730:-1:exon
so has part: feature:677727-677782:-1:exon
so has part: feature:676416-676540:-1:exon
so has part: feature:675582-675758:-1:exon
so has part: feature:672997-673089:-1:exon
so has part: feature:672413-672559:-1:exon
so has part: feature:671088-671165:-1:exon
so has part: feature:670845-670898:-1:exon
so has part: feature:670287-670398:-1:exon
so has part: feature:669004-669149:-1:exon
so has part: feature:666511-666609:-1:exon
so has part: feature:664144-665032:-1:exon
so has part: feature:663326-663615:-1:exon

XP_038626578.1
type: Protein
SIO_000068: ncbiprotein

position:663326:-1
position: 663326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743354:-1
position: 743354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743300-743354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729527-729620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705270-705282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704178-704238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702208-702300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701176-701356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:700170-700257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:699399-699533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698565-698677:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:698004-698115:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:696423-696635:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695483-695593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:694194-694328:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:693270-693400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:691866-691952:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:690325-690524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689242-689488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:687350-687512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:686673-686822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:685204-685353:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:684685-684798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:684018-684188:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:682544-682701:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:681434-681566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:681110-681256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:680563-680592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:680311-680410:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:678604-678730:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:677727-677782:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:676416-676540:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:675582-675758:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:672997-673089:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:672413-672559:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:671088-671165:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:670845-670898:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:670287-670398:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:669004-669149:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:666511-666609:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:664144-665032:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:663326-663615:-1:exon

MSRA
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MSRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 774864..789424
location: region:774864-789424:1
so has part: feature:774864-789424:1:exon
subclass of: SO_0000010

119949381
type: Gene
SIO_000068: ncbigene

position:774864:1
position: 774864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789424:1
position: 789424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774864-789424:1:exon

MSRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MSRA
product: methionine sulfoxide reductase A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038771122.1
SIO_010081: MSRA
subclass of: SO_0000673
so part of: MSRA
location: join(774864..775038,779455..779523,780580..780699,781293..781397,783071..783177,787371..787496,788893..789424)
location: region:774864-789424:1
so has part: feature:774864-775038:1:exon
so has part: feature:779455-779523:1:exon
so has part: feature:780580-780699:1:exon
so has part: feature:781293-781397:1:exon
so has part: feature:783071-783177:1:exon
so has part: feature:787371-787496:1:exon
so has part: feature:788893-789424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774864-775038:1:exon

position:775038:1
position: 775038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779455-779523:1:exon

position:779455:1
position: 779455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779523:1
position: 779523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780580-780699:1:exon

position:780580:1
position: 780580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780699:1
position: 780699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781293-781397:1:exon

position:781293:1
position: 781293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781397:1
position: 781397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783071-783177:1:exon

position:783071:1
position: 783071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783177:1
position: 783177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:787371-787496:1:exon

position:787371:1
position: 787371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787496:1
position: 787496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788893-789424:1:exon

position:788893:1
position: 788893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MSRA
product: methionine sulfoxide reductase A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771123.1
SIO_010081: MSRA
subclass of: SO_0000673
so part of: MSRA
location: join(774865..775038,779455..779523,780580..780699,781293..781397,783071..783177,788893..789424)
location: region:774865-789424:1
so has part: feature:774865-775038:1:exon
so has part: feature:779455-779523:1:exon
so has part: feature:780580-780699:1:exon
so has part: feature:781293-781397:1:exon
so has part: feature:783071-783177:1:exon
so has part: feature:788893-789424:1:exon

position:774865:1
position: 774865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774865-775038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779455-779523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780580-780699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781293-781397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783071-783177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:788893-789424:1:exon

MSRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MSRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial peptide methionine sulfoxide reductase isoform X1
translation: MLPAASRRLLRALGLSRKMGEASSTLPSRDQAPLGRAEPLQTTGRHHVSGNRTVAPFPEGTQMIVFGMGCFWGAERKFWKQPGVYCTHVGYAGGYTPNPTYKEVCSGKTGHAECVRVVYYPERISFEDLLRVFWENHDPTQGMRQGNDFGTQYRSAIFPAAAGQLEAALNSREKYQKAHVTSTRRAATLLHSYHGSQPSLPIGCRWGRKGWPGVGVSSQVLTDSGFGAITTDIREGQEFYYAEEYHQQYLSKNPDGYCGLGGTGVSCPIGIKK
SIO_010081: MSRA
subclass of: SO_0000673
so part of: MSRA
location: join(774909..775038,779455..779523,780580..780699,781293..781397,783071..783177,787371..787496,788893..789057)
location: region:774909-789057:1
so has part: feature:774909-775038:1:exon
so has part: feature:779455-779523:1:exon
so has part: feature:780580-780699:1:exon
so has part: feature:781293-781397:1:exon
so has part: feature:783071-783177:1:exon
so has part: feature:787371-787496:1:exon
so has part: feature:788893-789057:1:exon

XP_038627050.1
type: Protein
SIO_000068: ncbiprotein

position:774909:1
position: 774909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789057:1
position: 789057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774909-775038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779455-779523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780580-780699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781293-781397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783071-783177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:787371-787496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788893-789057:1:exon

MSRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MSRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial peptide methionine sulfoxide reductase isoform X2
translation: MLPAASRRLLRALGLSRKMGEASSTLPSRDQAPLGRAEPLQTTGRHHVSGNRTVAPFPEGTQMIVFGMGCFWGAERKFWKQPGVYCTHVGYAGGYTPNPTYKEVCSGKTGHAECVRVVYYPERISFEDLLRVFWENHDPTQGMRQGNDFGTQYRSAIFPAAAGQLEAALNSREKYQKVLTDSGFGAITTDIREGQEFYYAEEYHQQYLSKNPDGYCGLGGTGVSCPIGIKK
SIO_010081: MSRA
subclass of: SO_0000673
so part of: MSRA
location: join(774909..775038,779455..779523,780580..780699,781293..781397,783071..783177,788893..789057)
location: region:774909-789057:1
so has part: feature:774909-775038:1:exon
so has part: feature:779455-779523:1:exon
so has part: feature:780580-780699:1:exon
so has part: feature:781293-781397:1:exon
so has part: feature:783071-783177:1:exon
so has part: feature:788893-789057:1:exon

XP_038627051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:774909-775038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779455-779523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780580-780699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781293-781397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783071-783177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:788893-789057:1:exon

PRSS55
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PRSS55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 791080..793571
location: region:791080-793571:1
so has part: feature:791080-793571:1:exon
subclass of: SO_0000010

119949452
type: Gene
SIO_000068: ncbigene

position:791080:1
position: 791080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793571:1
position: 793571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791080-793571:1:exon

PRSS55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PRSS55
product: serine protease 55, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771240.1
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791080..791321,791693..791879,792430..792680,792906..793016,793271..793516)
location: region:791080-793516:1
so has part: feature:791080-791321:1:exon
so has part: feature:791693-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792906-793016:1:exon
so has part: feature:793271-793516:1:exon

position:793516:1
position: 793516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791080-791321:1:exon

position:791321:1
position: 791321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791693-791879:1:exon

position:791693:1
position: 791693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791879:1
position: 791879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

position:792430:1
position: 792430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792680:1
position: 792680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792906-793016:1:exon

position:792906:1
position: 792906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793016:1
position: 793016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793516:1:exon

position:793271:1
position: 793271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRSS55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PRSS55
product: serine protease 55, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771239.1
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791083..791321,791696..791879,792430..792680,792877..793016,793271..793571)
location: region:791083-793571:1
so has part: feature:791083-791321:1:exon
so has part: feature:791696-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792877-793016:1:exon
so has part: feature:793271-793571:1:exon

position:791083:1
position: 791083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791083-791321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791696-791879:1:exon

position:791696:1
position: 791696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792877-793016:1:exon

position:792877:1
position: 792877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793571:1:exon

PRSS55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PRSS55
product: serine protease 55, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771238.1
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791084..791321,791693..791879,792430..792680,792877..793016,793271..793571)
location: region:791084-793571:1
so has part: feature:791084-791321:1:exon
so has part: feature:791693-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792877-793016:1:exon
so has part: feature:793271-793571:1:exon

position:791084:1
position: 791084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791084-791321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791693-791879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792877-793016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793571:1:exon

PRSS55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PRSS55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 55 isoform X1
translation: MARGGPAQAIETPTSATTAVTASWGRHLLLTILLAASLGRAQAGQSANNSVRAQRSGAGEKQLACGRPLGPQGRTMMPVIGGTAARPGEFPWQVSIQNKGVHLCGGAILDRWWVLSAAHCFSKSKSTALRVVLGSHDLQSPDCEHKAVKRTIMHQHFNHVFNDNDVALLLLSSPIDFGKRKLPICLPAPGGPRAWKDCWATGWGITEEGGKEMPSILQKVQLQLVSWEHCTKKIHFITQNMLCAGHKKGGKDTCQGDSGGPLVCTLGARQQWYQLGIVSWGIGCGRKGRPGVYTAMPNYLDWIQNETSLVGRPYSPLLGSGHPTAVPLPWLLSLPASLWILPLPACFPWK
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791135..791321,791693..791879,792430..792680,792877..793016,793271..793558)
location: region:791135-793558:1
so has part: feature:791135-791321:1:exon
so has part: feature:791693-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792877-793016:1:exon
so has part: feature:793271-793558:1:exon

XP_038627166.1
type: Protein
SIO_000068: ncbiprotein

position:791135:1
position: 791135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793558:1
position: 793558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791135-791321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791693-791879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792877-793016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793558:1:exon

PRSS55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PRSS55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 55 isoform X2
translation: MARGGPAQAIETPTSATTAVTASWGRHLLLTILLAASLGRAQAGQSANNSVRAQRSGAGEKQSCGRPLGPQGRTMMPVIGGTAARPGEFPWQVSIQNKGVHLCGGAILDRWWVLSAAHCFSKSKSTALRVVLGSHDLQSPDCEHKAVKRTIMHQHFNHVFNDNDVALLLLSSPIDFGKRKLPICLPAPGGPRAWKDCWATGWGITEEGGKEMPSILQKVQLQLVSWEHCTKKIHFITQNMLCAGHKKGGKDTCQGDSGGPLVCTLGARQQWYQLGIVSWGIGCGRKGRPGVYTAMPNYLDWIQNETSLVGRPYSPLLGSGHPTAVPLPWLLSLPASLWILPLPACFPWK
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791135..791321,791696..791879,792430..792680,792877..793016,793271..793558)
location: region:791135-793558:1
so has part: feature:791135-791321:1:exon
so has part: feature:791696-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792877-793016:1:exon
so has part: feature:793271-793558:1:exon

XP_038627167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:791135-791321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791696-791879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792877-793016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793558:1:exon

PRSS55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PRSS55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 55 isoform X3
translation: MARGGPAQAIETPTSATTAVTASWGRHLLLTILLAASLGRAQAGQSANNSVRAQRSGAGEKQLACGRPLGPQGRTMMPVIGGTAARPGEFPWQVSIQNKGVHLCGGAILDRWWVLSAAHCFSKSKSTALRVVLGSHDLQSPDCEHKAVKRTIMHQHFNHVFNDNDVALLLLSSPIDFGKRKLPICLPAPGGPRAWKDCWATGWGITEEESPVAAGQLGTLHQENPLHHPEHALCWTQERGKGHLPGRQRGAPGVHPGGPTAVVPAGYRQLGHRLRQEGPPRGLYGNAQLPGLDPE
SIO_010081: PRSS55
subclass of: SO_0000673
so part of: PRSS55
location: join(791135..791321,791693..791879,792430..792680,792906..793016,793271..793422)
location: region:791135-793422:1
so has part: feature:791135-791321:1:exon
so has part: feature:791693-791879:1:exon
so has part: feature:792430-792680:1:exon
so has part: feature:792906-793016:1:exon
so has part: feature:793271-793422:1:exon

XP_038627168.1
type: Protein
SIO_000068: ncbiprotein

position:793422:1
position: 793422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791135-791321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791693-791879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792430-792680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792906-793016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793271-793422:1:exon

LOC119949587
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 794436..814560
location: region:794436-814560:1
so has part: feature:794436-814560:1:exon
subclass of: SO_0000010

119949587
type: Gene
SIO_000068: ncbigene

position:794436:1
position: 794436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814560:1
position: 814560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794436-814560:1:exon

LOC119949587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949587
product: acrosin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771453.1
SIO_010081: LOC119949587
subclass of: SO_0000673
so part of: LOC119949587
location: join(794436..794440,794810..794910,795802..795988,796884..797134,797808..797950,798914..799225,799267..799408,806192..806237,806932..807024,811965..812386,814487..814560)
location: region:794436-814560:1
so has part: feature:794436-794440:1:exon
so has part: feature:794810-794910:1:exon
so has part: feature:795802-795988:1:exon
so has part: feature:796884-797134:1:exon
so has part: feature:797808-797950:1:exon
so has part: feature:798914-799225:1:exon
so has part: feature:799267-799408:1:exon
so has part: feature:806192-806237:1:exon
so has part: feature:806932-807024:1:exon
so has part: feature:811965-812386:1:exon
so has part: feature:814487-814560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794436-794440:1:exon

position:794440:1
position: 794440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794810-794910:1:exon

position:794810:1
position: 794810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794910:1
position: 794910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:795802-795988:1:exon

position:795802:1
position: 795802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795988:1
position: 795988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796884-797134:1:exon

position:796884:1
position: 796884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797134:1
position: 797134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797808-797950:1:exon

position:797808:1
position: 797808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797950:1
position: 797950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:798914-799225:1:exon

position:798914:1
position: 798914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799225:1
position: 799225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:799267-799408:1:exon

position:799267:1
position: 799267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799408:1
position: 799408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806192-806237:1:exon

position:806192:1
position: 806192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806237:1
position: 806237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806932-807024:1:exon

position:806932:1
position: 806932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807024:1
position: 807024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:811965-812386:1:exon

position:811965:1
position: 811965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812386:1
position: 812386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:814487-814560:1:exon

position:814487:1
position: 814487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119949587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acrosin-like
translation: MKWSSGRGGWLEGDTMLPTQLLASLLVASMHTAGAVCGVRPGYRSAGSLQSRIVGGTDAAAGEFPWQVSIQMRRAHFCGGSILSNWWVLTAAHCFIRIKSDLNIAVGNTNLDSPNMEIKRLDRLVMHPQFNKDTMDHDIALLLLDTPFHFGKDKGPICLPLQHDPLTWPDCWVAGWGRTEEGEEYQVSRTLQKVEMKVIPWDKCAARFPLVTRNMLCAGFEEGGRDSCQGDSGGALVCSSRAGEKWSQLGIVSWGEGCARPGKPGIYTSVFNYLNWIKAVTAQEGKPFIPEGQAYTPKPSPRPVPAPIPAPTPAPVPAPTPAPVPIPVPAPVPLPRIREHRPSPPTPFHLLSPALPSPSAGGVSSLGGINSRFVHISESIWSHRFKRQDEGEPLRSDLSYNDVGMGTGSSGSWFLNDSGYLGRASELGRHCHTTSRGRQSPGALPYRHTTSRGSQSPAALPYCHTTSRGSHSPPALPYDQQREPVPCGAALLPYDQQREPVPCGAALLPYDQQREPVFCGAALLPYDQQRKPVPSGAALLPYDQQREPVPSGAALLPYDQQRGPVPCGPLPFLVSCYTLMALIIFLPFQTF
SIO_010081: LOC119949587
subclass of: SO_0000673
so part of: LOC119949587
location: join(794436..794440,794810..794910,795802..795988,796884..797134,797808..797950,798914..799225,799267..799408,806192..806237,806932..807024,811965..812386,814487..814560)
location: region:794436-814560:1
so has part: feature:794436-794440:1:exon
so has part: feature:794810-794910:1:exon
so has part: feature:795802-795988:1:exon
so has part: feature:796884-797134:1:exon
so has part: feature:797808-797950:1:exon
so has part: feature:798914-799225:1:exon
so has part: feature:799267-799408:1:exon
so has part: feature:806192-806237:1:exon
so has part: feature:806932-807024:1:exon
so has part: feature:811965-812386:1:exon
so has part: feature:814487-814560:1:exon

XP_038627381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:794436-794440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794810-794910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:795802-795988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796884-797134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797808-797950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798914-799225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799267-799408:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806192-806237:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806932-807024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811965-812386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:814487-814560:1:exon

CX2H8orf74
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CX2H8orf74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 828569..835002
location: region:828569-835002:1
so has part: feature:828569-835002:1:exon
subclass of: SO_0000010

119949588
type: Gene
SIO_000068: ncbigene

position:828569:1
position: 828569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835002:1
position: 835002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828569-835002:1:exon

CX2H8orf74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CX2H8orf74
product: chromosome X2 C8orf74 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771454.1
SIO_010081: CX2H8orf74
subclass of: SO_0000673
so part of: CX2H8orf74
location: join(828569..828636,830297..830474,833572..833963,834776..835002)
location: region:828569-835002:1
so has part: feature:828569-828636:1:exon
so has part: feature:830297-830474:1:exon
so has part: feature:833572-833963:1:exon
so has part: feature:834776-835002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828569-828636:1:exon

position:828636:1
position: 828636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830297-830474:1:exon

position:830297:1
position: 830297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830474:1
position: 830474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833572-833963:1:exon

position:833572:1
position: 833572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833963:1
position: 833963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:834776-835002:1:exon

position:834776:1
position: 834776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CX2H8orf74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CX2H8orf74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf74 homolog
translation: MATLSTQDVRRIFSLQEEEGRQCLRSLLQEGDHPRQDILADIYYDSLIFAGEKGFPWPAVAEVVSFIRELLEETRGVSLASAVAVLGYKLQSARAWLSPSHLDALCAYVHHTYLCHFRLYQCVLVRAPEEKRETARLQLCLPPQPAPLAEGTDRDSWLHRQRLAELSQEEAEILSRPAPPLLETKQALSEAQEELQVPRGQGLDREVLERVVRGAVGARLGAAGRRLQAQVQAAFDLLQLRVRRKELSFRAPPAKPGPDPHKTPFPRNRKN
SIO_010081: CX2H8orf74
subclass of: SO_0000673
so part of: CX2H8orf74
location: join(828589..828636,830297..830474,833572..833963,834776..834973)
location: region:828589-834973:1
so has part: feature:828589-828636:1:exon
so has part: feature:830297-830474:1:exon
so has part: feature:833572-833963:1:exon
so has part: feature:834776-834973:1:exon

XP_038627382.1
type: Protein
SIO_000068: ncbiprotein

position:828589:1
position: 828589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834973:1
position: 834973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828589-828636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830297-830474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833572-833963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834776-834973:1:exon

SOX7
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SOX7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(845447..852999)
location: region:845447-852999:-1
so has part: feature:845447-852999:-1:exon
subclass of: SO_0000010

119949589
type: Gene
SIO_000068: ncbigene

position:845447:-1
position: 845447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852999:-1
position: 852999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845447-852999:-1:exon

SOX7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SOX7
product: SRY-box transcription factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771455.1
SIO_010081: SOX7
subclass of: SO_0000673
so part of: SOX7
location: complement(join(845447..846435,852765..852999))
location: region:845447-852999:-1
so has part: feature:852765-852999:-1:exon
so has part: feature:845447-846435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852765-852999:-1:exon

position:852765:-1
position: 852765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845447-846435:-1:exon

position:846435:-1
position: 846435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOX7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SOX7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-7
translation: MASLLLPPGLYPWPEAPAPPLTPLTPGGGLGSPSGPRSPPDSRIRRPMNAFMVWAKDERKRLALQNPDLHNAELSKMLGRSWKALSPAQKRPHVEEAERLRVQHLRDHPHYKYRPRRKKPTRRFCRRGDAPRPPGGPPPQAPAVEAYPHGLPTPPEGSPLDGPDANRTFFSPGPSEPVPAPAAFFSPGPFPGLSPLSPPPEPAGLEALDRLSPDDLLADVDRDEFDQYLRAPGPPAGVSLISALADATAAYYSSYSVS
SIO_010081: SOX7
subclass of: SO_0000673
so part of: SOX7
location: complement(join(845894..846435,852765..852999))
location: region:845894-852999:-1
so has part: feature:852765-852999:-1:exon
so has part: feature:845894-846435:-1:exon

XP_038627383.1
type: Protein
SIO_000068: ncbiprotein

position:845894:-1
position: 845894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852765-852999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845894-846435:-1:exon

PINX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PINX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(867517..899901)
location: region:867517-899901:-1
so has part: feature:867517-899901:-1:exon
subclass of: SO_0000010

119949386
type: Gene
SIO_000068: ncbigene

position:867517:-1
position: 867517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899901:-1
position: 899901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867517-899901:-1:exon

PINX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PINX1
product: PIN2 (TERF1) interacting telomerase inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771130.1
SIO_010081: PINX1
subclass of: SO_0000673
so part of: PINX1
location: complement(join(867517..868870,880803..880882,884689..884781,892861..892939,894038..894130,894628..894737,899768..899901))
location: region:867517-899901:-1
so has part: feature:899768-899901:-1:exon
so has part: feature:894628-894737:-1:exon
so has part: feature:894038-894130:-1:exon
so has part: feature:892861-892939:-1:exon
so has part: feature:884689-884781:-1:exon
so has part: feature:880803-880882:-1:exon
so has part: feature:867517-868870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899768-899901:-1:exon

position:899768:-1
position: 899768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894628-894737:-1:exon

position:894628:-1
position: 894628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894737:-1
position: 894737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894038-894130:-1:exon

position:894038:-1
position: 894038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894130:-1
position: 894130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892861-892939:-1:exon

position:892861:-1
position: 892861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892939:-1
position: 892939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:884689-884781:-1:exon

position:884689:-1
position: 884689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884781:-1
position: 884781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:880803-880882:-1:exon

position:880803:-1
position: 880803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880882:-1
position: 880882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:867517-868870:-1:exon

position:868870:-1
position: 868870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PINX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PINX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PIN2/TERF1-interacting telomerase inhibitor 1
translation: MAMLAEPRRKQKWSLDPRNSAWSNDDSKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVTVKNNQLGLGATANHEDSWLAHHDEFNQLLAQLNSCHRKTEAGSSDSKEKPTFSLEEKSKSSRKRLHYMKFTKGKDLSSRSETDLNCIFGKRRESKEVAKEGPDPDSTEVEESSTVTSALTVQEYFAKRMAELQQSRKRNQDALLGAGFTQPPEDQAPGRGLQDKRKRRKSRGLQEEEAEEETEDEDGAQEATGVTERRRRKRKNTESQSPGEAGSRAEAPEHRQIGVCAAGDQDPEATGSSVKRKKRKKKKERKREVEEEAEEEAREQTQERTPPKKKKKKKKKREEEEEG
SIO_010081: PINX1
subclass of: SO_0000673
so part of: PINX1
location: complement(join(868292..868870,880803..880882,884689..884781,892861..892939,894038..894130,894628..894737,899768..899786))
location: region:868292-899786:-1
so has part: feature:899768-899786:-1:exon
so has part: feature:894628-894737:-1:exon
so has part: feature:894038-894130:-1:exon
so has part: feature:892861-892939:-1:exon
so has part: feature:884689-884781:-1:exon
so has part: feature:880803-880882:-1:exon
so has part: feature:868292-868870:-1:exon

XP_038627058.1
type: Protein
SIO_000068: ncbiprotein

position:868292:-1
position: 868292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899786:-1
position: 899786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899768-899786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894628-894737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894038-894130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892861-892939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884689-884781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880803-880882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868292-868870:-1:exon

XKR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: XKR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(928613..964127)
location: region:928613-964127:-1
so has part: feature:928613-964127:-1:exon
subclass of: SO_0000010

119949610
type: Gene
SIO_000068: ncbigene

position:928613:-1
position: 928613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964127:-1
position: 964127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928613-964127:-1:exon

XKR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: XKR6
product: XK related 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771478.1
SIO_010081: XKR6
subclass of: SO_0000673
so part of: XKR6
location: complement(join(928613..929559,931589..931785,963337..964127))
location: region:928613-964127:-1
so has part: feature:963337-964127:-1:exon
so has part: feature:931589-931785:-1:exon
so has part: feature:928613-929559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963337-964127:-1:exon

position:963337:-1
position: 963337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931589-931785:-1:exon

position:931589:-1
position: 931589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931785:-1
position: 931785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928613-929559:-1:exon

position:929559:-1
position: 929559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XKR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: XKR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 6
translation: MAAKSDGLGVAGVGFAPLHNPDEAAAAAGGGGGAGAGEEEEEDGDPAEGGGEEEEEEEGEEPGESSSLHICHCCNTSSCYWGCRSACPRDLLARKARRPPAASSPPPAGSPSSPTAPAPPAPSPPPERPWLDCLWIVLALLVFFGDVGTDVWLAARHYGQGDYGWFGLTLFFVLVPSLLVQTLSFRWFVQDYTGGGLGAVEGLSSRGPPMMGAGRLPGRATPGAQRLCRLSVWIWQVVIHLLQMGQVWRYIRTMYLGIQSQRQKEHQRRFYWAMMYEYADVNMLRLLETFLESAPQLVLQLCIMIQKNRADTLPCVSSATSLVSLAWVLASYHKLLRDSRDDKRSLSYRGAVVHLFWRLFTISSRVLSFALFASIFQLYFGIFVVVHWCAMAFWVIHGGTDFCMSKWEEILFNMVVGIVYIFCWFNVKEGRTRYRMFAYYTVVLSENAALTLLWYFYRNPETTDAYATPALCGVFLSFAAGVALMALYYGVLHPTGPRAWPFASSCCAELLWGIPLPPEAEPPAAPPAPPAPPPAPEPAEEPAADTCLPVFQVRVVGPSTPTGRPLPPEGPLIKIDMPRKRYPAWDAHFVDRRLRRTINVLQYVTPSAVGIRYRDGPLLYELLQYESSL
SIO_010081: XKR6
subclass of: SO_0000673
so part of: XKR6
location: complement(join(928613..929559,931589..931785,963337..964082))
location: region:928613-964082:-1
so has part: feature:963337-964082:-1:exon
so has part: feature:931589-931785:-1:exon
so has part: feature:928613-929559:-1:exon

XP_038627406.1
type: Protein
SIO_000068: ncbiprotein

position:964082:-1
position: 964082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963337-964082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931589-931785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928613-929559:-1:exon

MTMR9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MTMR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 989897..997576
location: region:989897-997576:1
so has part: feature:989897-997576:1:exon
subclass of: SO_0000010

119949641
type: Gene
SIO_000068: ncbigene

position:989897:1
position: 989897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997576:1
position: 997576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989897-997576:1:exon

MTMR9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR9
product: myotubularin related protein 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771524.1
SIO_010081: MTMR9
subclass of: SO_0000673
so part of: MTMR9
location: join(989897..990176,992369..992477,992838..992963,994024..994197,994485..994702,995624..995785,995895..996036,996144..996364,996444..996595,996857..997576)
location: region:989897-997576:1
so has part: feature:989897-990176:1:exon
so has part: feature:992369-992477:1:exon
so has part: feature:992838-992963:1:exon
so has part: feature:994024-994197:1:exon
so has part: feature:994485-994702:1:exon
so has part: feature:995624-995785:1:exon
so has part: feature:995895-996036:1:exon
so has part: feature:996144-996364:1:exon
so has part: feature:996444-996595:1:exon
so has part: feature:996857-997576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989897-990176:1:exon

position:990176:1
position: 990176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:992369-992477:1:exon

position:992369:1
position: 992369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992477:1
position: 992477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:992838-992963:1:exon

position:992838:1
position: 992838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992963:1
position: 992963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994024-994197:1:exon

position:994024:1
position: 994024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994197:1
position: 994197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994485-994702:1:exon

position:994485:1
position: 994485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994702:1
position: 994702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995624-995785:1:exon

position:995624:1
position: 995624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995785:1
position: 995785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:995895-996036:1:exon

position:995895:1
position: 995895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996036:1
position: 996036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:996144-996364:1:exon

position:996144:1
position: 996144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996364:1
position: 996364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:996444-996595:1:exon

position:996444:1
position: 996444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996595:1
position: 996595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:996857-997576:1:exon

position:996857:1
position: 996857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR9
product: myotubularin related protein 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038771525.1
SIO_010081: MTMR9
subclass of: SO_0000673
so part of: MTMR9
location: join(989897..990176,992369..992477,992838..992963,994024..994197,994485..994702,995624..995785,995895..996036,996249..996364,996444..996595,996857..997576)
location: region:989897-997576:1
so has part: feature:989897-990176:1:exon
so has part: feature:992369-992477:1:exon
so has part: feature:992838-992963:1:exon
so has part: feature:994024-994197:1:exon
so has part: feature:994485-994702:1:exon
so has part: feature:995624-995785:1:exon
so has part: feature:995895-996036:1:exon
so has part: feature:996249-996364:1:exon
so has part: feature:996444-996595:1:exon
so has part: feature:996857-997576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989897-990176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992369-992477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992838-992963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994024-994197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994485-994702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995624-995785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995895-996036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996249-996364:1:exon

position:996249:1
position: 996249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:996444-996595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:996857-997576:1:exon

MTMR9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 9 isoform X1
translation: MEFAELIKTPRADNVVLHRPLYPAVEGTLCLTGHHLILSSRQDNTEELWLLHANIDSIDKRFVGSLGTIVVKCKDLRVIRLDVPGMDECLNIASSIEALSTLGSVTLMYPFFYRPMFEVGEDGWQAFLPQQEFERVSSVTSDWRLSQVNKDFSVCPSYPALVTVPAAVDDEALRKAAQFRHGGRFPVLSYYHKKNGMVMMRSSQPLTGTNGRRCKEDEKLVNATLRPGKRGYIIDTRALNVAQQARAKGGGFEQEAHYPQWRRIHKAVERYPILQESLIKLVEACNDQSHNMDRWLSKLEASNWLTHVKEILTTACLAAQCLDREGASVLVHGTEGTDSTLQVTSLAQILLDPRCRTLRGFQALVEREWLQAGHPFQQRCAQGAYASGKQKWEAPVFFLFLDCVWQVLRQFPCSFEFTEHFLILLLEHAYASQFGTFLGNNPSERSKLKLPQKTMSLWSWVNQPTELARFTNPLFEANGLVIWPSVAPQSLQLWEGVFLRWTRSSKYLDEACDEMVAIIQYNKELQAKVNALRRQLAQLETEDKLRESP
SIO_010081: MTMR9
subclass of: SO_0000673
so part of: MTMR9
location: join(989995..990176,992369..992477,992838..992963,994024..994197,994485..994702,995624..995785,995895..996036,996144..996364,996444..996595,996857..997020)
location: region:989995-997020:1
so has part: feature:989995-990176:1:exon
so has part: feature:992369-992477:1:exon
so has part: feature:992838-992963:1:exon
so has part: feature:994024-994197:1:exon
so has part: feature:994485-994702:1:exon
so has part: feature:995624-995785:1:exon
so has part: feature:995895-996036:1:exon
so has part: feature:996144-996364:1:exon
so has part: feature:996444-996595:1:exon
so has part: feature:996857-997020:1:exon

XP_038627452.1
type: Protein
SIO_000068: ncbiprotein

position:989995:1
position: 989995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997020:1
position: 997020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989995-990176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992369-992477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992838-992963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994024-994197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994485-994702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995624-995785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995895-996036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996144-996364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:996444-996595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:996857-997020:1:exon

MTMR9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 9 isoform X2
translation: MEFAELIKTPRADNVVLHRPLYPAVEGTLCLTGHHLILSSRQDNTEELWLLHANIDSIDKRFVGSLGTIVVKCKDLRVIRLDVPGMDECLNIASSIEALSTLGSVTLMYPFFYRPMFEVGEDGWQAFLPQQEFERVSSVTSDWRLSQVNKDFSVCPSYPALVTVPAAVDDEALRKAAQFRHGGRFPVLSYYHKKNGMVMMRSSQPLTGTNGRRCKEDEKLVNATLRPGKRGYIIDTRALNVAQQARAKGGGFEQEAHYPQWRRIHKAVERYPILQESLIKLVEACNDQSHNMDRWLSKLEASNWLTHVKEILTTACLAAQCLDREGASVLVHGTEGTDSTLQVTSLAQILLDPRCRTLRGFQALVEREWLQVLRQFPCSFEFTEHFLILLLEHAYASQFGTFLGNNPSERSKLKLPQKTMSLWSWVNQPTELARFTNPLFEANGLVIWPSVAPQSLQLWEGVFLRWTRSSKYLDEACDEMVAIIQYNKELQAKVNALRRQLAQLETEDKLRESP
SIO_010081: MTMR9
subclass of: SO_0000673
so part of: MTMR9
location: join(989995..990176,992369..992477,992838..992963,994024..994197,994485..994702,995624..995785,995895..996036,996249..996364,996444..996595,996857..997020)
location: region:989995-997020:1
so has part: feature:989995-990176:1:exon
so has part: feature:992369-992477:1:exon
so has part: feature:992838-992963:1:exon
so has part: feature:994024-994197:1:exon
so has part: feature:994485-994702:1:exon
so has part: feature:995624-995785:1:exon
so has part: feature:995895-996036:1:exon
so has part: feature:996249-996364:1:exon
so has part: feature:996444-996595:1:exon
so has part: feature:996857-997020:1:exon

XP_038627453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989995-990176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992369-992477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992838-992963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994024-994197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994485-994702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995624-995785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995895-996036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996249-996364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:996444-996595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:996857-997020:1:exon

RPS6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1006351..1011072
location: region:1006351-1011072:1
so has part: feature:1006351-1011072:1:exon
subclass of: SO_0000010

119949557
type: Gene
SIO_000068: ncbigene

position:1006351:1
position: 1006351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011072:1
position: 1011072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006351-1011072:1:exon

RPS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RPS6
product: ribosomal protein S6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038771422.1
SIO_010081: RPS6
subclass of: SO_0000673
so part of: RPS6
location: join(1006351..1006442,1006670..1006801,1008938..1009148,1010438..1010584,1010678..1010835,1010932..1011072)
location: region:1006351-1011072:1
so has part: feature:1006351-1006442:1:exon
so has part: feature:1006670-1006801:1:exon
so has part: feature:1008938-1009148:1:exon
so has part: feature:1010438-1010584:1:exon
so has part: feature:1010678-1010835:1:exon
so has part: feature:1010932-1011072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006351-1006442:1:exon

position:1006442:1
position: 1006442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006670-1006801:1:exon

position:1006670:1
position: 1006670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006801:1
position: 1006801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008938-1009148:1:exon

position:1008938:1
position: 1008938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009148:1
position: 1009148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010438-1010584:1:exon

position:1010438:1
position: 1010438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010584:1
position: 1010584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010678-1010835:1:exon

position:1010678:1
position: 1010678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010835:1
position: 1010835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1010932-1011072:1:exon

position:1010932:1
position: 1010932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S6
translation: MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVPADSLGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEAAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK
SIO_010081: RPS6
subclass of: SO_0000673
so part of: RPS6
location: join(1006437..1006442,1006670..1006801,1008938..1009148,1010438..1010584,1010678..1010835,1010932..1011027)
location: region:1006437-1011027:1
so has part: feature:1006437-1006442:1:exon
so has part: feature:1006670-1006801:1:exon
so has part: feature:1008938-1009148:1:exon
so has part: feature:1010438-1010584:1:exon
so has part: feature:1010678-1010835:1:exon
so has part: feature:1010932-1011027:1:exon

XP_038627350.1
type: Protein
SIO_000068: ncbiprotein

position:1006437:1
position: 1006437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011027:1
position: 1011027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006437-1006442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006670-1006801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1008938-1009148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010438-1010584:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010678-1010835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010932-1011027:1:exon

LOC119949271
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1018644..1037336
location: region:1018644-1037336:1
so has part: feature:1018644-1037336:1:exon
subclass of: SO_0000010

119949271
type: Gene
SIO_000068: ncbigene

position:1018644:1
position: 1018644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037336:1
position: 1037336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018644-1037336:1:exon

LOC119949271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949271
product: L-threonine 3-dehydrogenase, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770886.1
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1018644..1018747,1028615..1028696,1030085..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1037336)
location: region:1018644-1037336:1
so has part: feature:1018644-1018747:1:exon
so has part: feature:1028615-1028696:1:exon
so has part: feature:1030085-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1037336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018644-1018747:1:exon

position:1018747:1
position: 1018747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028615-1028696:1:exon

position:1028615:1
position: 1028615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028696:1
position: 1028696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030085-1030305:1:exon

position:1030085:1
position: 1030085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030305:1
position: 1030305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1030910-1030952:1:exon

position:1030910:1
position: 1030910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030952:1
position: 1030952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031629-1031699:1:exon

position:1031629:1
position: 1031629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031699:1
position: 1031699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033006-1033155:1:exon

position:1033006:1
position: 1033006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033155:1
position: 1033155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033257-1033429:1:exon

position:1033257:1
position: 1033257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033429:1
position: 1033429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1033787-1033877:1:exon

position:1033787:1
position: 1033787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033877:1
position: 1033877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1034340-1034609:1:exon

position:1034340:1
position: 1034340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034609:1
position: 1034609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1035028-1037336:1:exon

position:1035028:1
position: 1035028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119949271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949271
product: L-threonine 3-dehydrogenase, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770887.1
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1018650..1018747,1028521..1028696,1030085..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1037336)
location: region:1018650-1037336:1
so has part: feature:1018650-1018747:1:exon
so has part: feature:1028521-1028696:1:exon
so has part: feature:1030085-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1037336:1:exon

position:1018650:1
position: 1018650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018650-1018747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028521-1028696:1:exon

position:1028521:1
position: 1028521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030085-1030305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030910-1030952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031629-1031699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033006-1033155:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033257-1033429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033787-1033877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034340-1034609:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035028-1037336:1:exon

LOC119949271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949271
product: L-threonine 3-dehydrogenase, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770888.1
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1025613..1025770,1028615..1028696,1030085..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1037336)
location: region:1025613-1037336:1
so has part: feature:1025613-1025770:1:exon
so has part: feature:1028615-1028696:1:exon
so has part: feature:1030085-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1037336:1:exon

position:1025613:1
position: 1025613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025613-1025770:1:exon

position:1025770:1
position: 1025770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028615-1028696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030085-1030305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030910-1030952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031629-1031699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033006-1033155:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033257-1033429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033787-1033877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034340-1034609:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035028-1037336:1:exon

LOC119949271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-threonine 3-dehydrogenase, mitochondrial
translation: MPVARLLARTAVRALPGCGCRASLVPLRPQSTSPRQLPADASFHSVSFSDSEHPRVLITGGLGQLGVGLAKLLRKRFGKDNVILSDIRKPPDHVFSSGPFIYSDILDYKNLREIVVNNRITWLIHYSALLSAVGEANVPLARAVNITGLHNILDIAAEHSLRLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGEYYHYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHDAIKSGKFQCNLRPDTRLPMMYLDDCLKATLDVMEAPAEALTMRTYNINALSFTPAELAQEVLKHIPELQVTYNVDSVRQAIADSWPMNFDDSNARRDWGWKHDFDLPEMVTAMFNFLSSEARAARAN
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1030128..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1035167)
location: region:1030128-1035167:1
so has part: feature:1030128-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1035167:1:exon

XP_038626814.1
type: Protein
SIO_000068: ncbiprotein

position:1030128:1
position: 1030128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035167:1
position: 1035167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030128-1030305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030910-1030952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031629-1031699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033006-1033155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033257-1033429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033787-1033877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034340-1034609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035028-1035167:1:exon

LOC119949271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-threonine 3-dehydrogenase, mitochondrial
translation: MPVARLLARTAVRALPGCGCRASLVPLRPQSTSPRQLPADASFHSVSFSDSEHPRVLITGGLGQLGVGLAKLLRKRFGKDNVILSDIRKPPDHVFSSGPFIYSDILDYKNLREIVVNNRITWLIHYSALLSAVGEANVPLARAVNITGLHNILDIAAEHSLRLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGEYYHYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHDAIKSGKFQCNLRPDTRLPMMYLDDCLKATLDVMEAPAEALTMRTYNINALSFTPAELAQEVLKHIPELQVTYNVDSVRQAIADSWPMNFDDSNARRDWGWKHDFDLPEMVTAMFNFLSSEARAARAN
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1030128..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1035167)
location: region:1030128-1035167:1
so has part: feature:1030128-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1035167:1:exon

XP_038626815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1030128-1030305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030910-1030952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031629-1031699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033006-1033155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033257-1033429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033787-1033877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034340-1034609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035028-1035167:1:exon

LOC119949271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-threonine 3-dehydrogenase, mitochondrial
translation: MPVARLLARTAVRALPGCGCRASLVPLRPQSTSPRQLPADASFHSVSFSDSEHPRVLITGGLGQLGVGLAKLLRKRFGKDNVILSDIRKPPDHVFSSGPFIYSDILDYKNLREIVVNNRITWLIHYSALLSAVGEANVPLARAVNITGLHNILDIAAEHSLRLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGEYYHYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHDAIKSGKFQCNLRPDTRLPMMYLDDCLKATLDVMEAPAEALTMRTYNINALSFTPAELAQEVLKHIPELQVTYNVDSVRQAIADSWPMNFDDSNARRDWGWKHDFDLPEMVTAMFNFLSSEARAARAN
SIO_010081: LOC119949271
subclass of: SO_0000673
so part of: LOC119949271
location: join(1030128..1030305,1030910..1030952,1031629..1031699,1033006..1033155,1033257..1033429,1033787..1033877,1034340..1034609,1035028..1035167)
location: region:1030128-1035167:1
so has part: feature:1030128-1030305:1:exon
so has part: feature:1030910-1030952:1:exon
so has part: feature:1031629-1031699:1:exon
so has part: feature:1033006-1033155:1:exon
so has part: feature:1033257-1033429:1:exon
so has part: feature:1033787-1033877:1:exon
so has part: feature:1034340-1034609:1:exon
so has part: feature:1035028-1035167:1:exon

XP_038626816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1030128-1030305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030910-1030952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031629-1031699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033006-1033155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033257-1033429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033787-1033877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034340-1034609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035028-1035167:1:exon

FAM167A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FAM167A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1048701..1052132)
location: region:1048701-1052132:-1
so has part: feature:1048701-1052132:-1:exon
subclass of: SO_0000010

119949637
type: Gene
SIO_000068: ncbigene

position:1048701:-1
position: 1048701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052132:-1
position: 1052132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048701-1052132:-1:exon

FAM167A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FAM167A
product: family with sequence similarity 167 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038771518.1
SIO_010081: FAM167A
subclass of: SO_0000673
so part of: FAM167A
location: complement(join(1048701..1049109,1051553..1052132))
location: region:1048701-1052132:-1
so has part: feature:1051553-1052132:-1:exon
so has part: feature:1048701-1049109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051553-1052132:-1:exon

position:1051553:-1
position: 1051553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048701-1049109:-1:exon

position:1049109:-1
position: 1049109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM167A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FAM167A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM167A
translation: MAAPRIQVEAPEDGEGPGSTPAPGGHLRSLKTLTEKLRLETRRPSYLEWRGRLEGSARPGPDSDSDPGPSPPGDQRPPPASAPLVGFQSVGEALGWLKKELAEMRVQDEQLARQLMRLRTDIHQLKIEQTCHLHRRMLNDATYGLEERDELSDLFCDSPLASSFSLSAPLKVIGVTKMNINSRRFSLC
SIO_010081: FAM167A
subclass of: SO_0000673
so part of: FAM167A
location: complement(join(1048846..1049109,1051553..1051855))
location: region:1048846-1051855:-1
so has part: feature:1051553-1051855:-1:exon
so has part: feature:1048846-1049109:-1:exon

XP_038627446.1
type: Protein
SIO_000068: ncbiprotein

position:1048846:-1
position: 1048846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051855:-1
position: 1051855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051553-1051855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048846-1049109:-1:exon

BLK
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: BLK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1083459..1094529
location: region:1083459-1094529:1
so has part: feature:1083459-1094529:1:exon
subclass of: SO_0000010

119949440
type: Gene
SIO_000068: ncbigene

position:1083459:1
position: 1083459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094529:1
position: 1094529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083459-1094529:1:exon

BLK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: BLK
product: BLK proto-oncogene, Src family tyrosine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771213.1
SIO_010081: BLK
subclass of: SO_0000673
so part of: BLK
location: join(1083459..1083575,1084219..1084270,1084702..1084795,1087891..1087989,1088671..1088774,1089464..1089610,1090228..1090380,1091466..1091645,1092274..1092350,1093402..1093552,1093643..1093774,1094327..1094529)
location: region:1083459-1094529:1
so has part: feature:1083459-1083575:1:exon
so has part: feature:1084219-1084270:1:exon
so has part: feature:1084702-1084795:1:exon
so has part: feature:1087891-1087989:1:exon
so has part: feature:1088671-1088774:1:exon
so has part: feature:1089464-1089610:1:exon
so has part: feature:1090228-1090380:1:exon
so has part: feature:1091466-1091645:1:exon
so has part: feature:1092274-1092350:1:exon
so has part: feature:1093402-1093552:1:exon
so has part: feature:1093643-1093774:1:exon
so has part: feature:1094327-1094529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083459-1083575:1:exon

position:1083575:1
position: 1083575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084219-1084270:1:exon

position:1084219:1
position: 1084219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084270:1
position: 1084270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084702-1084795:1:exon

position:1084702:1
position: 1084702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084795:1
position: 1084795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087891-1087989:1:exon

position:1087891:1
position: 1087891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087989:1
position: 1087989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1088671-1088774:1:exon

position:1088671:1
position: 1088671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088774:1
position: 1088774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1089464-1089610:1:exon

position:1089464:1
position: 1089464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089610:1
position: 1089610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1090228-1090380:1:exon

position:1090228:1
position: 1090228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090380:1
position: 1090380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091466-1091645:1:exon

position:1091466:1
position: 1091466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091645:1
position: 1091645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1092274-1092350:1:exon

position:1092274:1
position: 1092274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092350:1
position: 1092350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1093402-1093552:1:exon

position:1093402:1
position: 1093402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093552:1
position: 1093552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1093643-1093774:1:exon

position:1093643:1
position: 1093643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093774:1
position: 1093774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1094327-1094529:1:exon

position:1094327:1
position: 1094327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BLK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: BLK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Blk
translation: MGAVSSKKQAKVKKKNLWGAPKVDQVPPRNQTPPPLPPSVVFSHVAAPAATPDPDQEGIFAVALYDFDALNDRDLQMRKGEKLQILIQTGDWWLAKSLVTGREGYIPGNYVARVDTLEVEKWFFKTINRKDAERQLLAPGNKAGAFLVRESETIPGAFSLSVKDSTAQGDVVKHYKIRSLDEGGYYISPKVTFPSLQDLVQHYSKKGDGLCQKLTTACVVLAPQRPWAQDEWEIPRQALRLVRRLGAGQFGEVWMGYYKNSVKVAIKTLKEGSMSAEAFLAEANLMKTLRHDRLVRLYAVVTSEPIYIVTEYMAKGCLLEFLKTDEGARLSLSRLIDMSAQVAEGMAYIEQRNSIHRDLRAANVLVSETLGCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAINYGVFSIKADVWSFGILMMEIVTYGRVPYPGMTNPEVIRNLERGYRMPCPDSCPAELYEVIAGCWESRPEERPTFEYLQSVLGDFYTATERQYELQP
SIO_010081: BLK
subclass of: SO_0000673
so part of: BLK
location: join(1083459..1083575,1084219..1084270,1084702..1084795,1087891..1087989,1088671..1088774,1089464..1089610,1090228..1090380,1091466..1091645,1092274..1092350,1093402..1093552,1093643..1093774,1094327..1094529)
location: region:1083459-1094529:1
so has part: feature:1083459-1083575:1:exon
so has part: feature:1084219-1084270:1:exon
so has part: feature:1084702-1084795:1:exon
so has part: feature:1087891-1087989:1:exon
so has part: feature:1088671-1088774:1:exon
so has part: feature:1089464-1089610:1:exon
so has part: feature:1090228-1090380:1:exon
so has part: feature:1091466-1091645:1:exon
so has part: feature:1092274-1092350:1:exon
so has part: feature:1093402-1093552:1:exon
so has part: feature:1093643-1093774:1:exon
so has part: feature:1094327-1094529:1:exon

XP_038627141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1083459-1083575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084219-1084270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084702-1084795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087891-1087989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088671-1088774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089464-1089610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1090228-1090380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091466-1091645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092274-1092350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1093402-1093552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093643-1093774:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1094327-1094529:1:exon

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1129003..1129074
location: region:1129003-1129074:1
so has part: feature:1129003-1129074:1:exon
subclass of: SO_0000663

119949778
type: Gene
SIO_000068: ncbigene

position:1129003:1
position: 1129003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129074:1
position: 1129074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129003-1129074:1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9261
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1129036..1129038,aa:Asp,seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: 1129003..1129074
location: region:1129003-1129074:1
so has part: feature:1129003-1129074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1129003-1129074:1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1149537..1149618)
location: region:1149537-1149618:-1
so has part: feature:1149537-1149618:-1:exon
subclass of: SO_0000663

119949779
type: Gene
SIO_000068: ncbigene

position:1149537:-1
position: 1149537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149618:-1
position: 1149618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149537-1149618:-1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9261
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1149583..1149585),aa:Gly, seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: complement(1149537..1149618)
location: region:1149537-1149618:-1
so has part: feature:1149537-1149618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149537-1149618:-1:exon

GATA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150250..1189290
location: region:1150250-1189290:1
so has part: feature:1150250-1189290:1:exon
subclass of: SO_0000010

119949322
type: Gene
SIO_000068: ncbigene

position:1150250:1
position: 1150250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189290:1
position: 1189290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150250-1189290:1:exon

GATA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GATA4
product: GATA binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038771004.1
SIO_010081: GATA4
subclass of: SO_0000673
so part of: GATA4
location: join(1150250..1150362,1158459..1159341,1184893..1185059,1185263..1185388,1186205..1186292,1186586..1186731,1187644..1189290)
location: region:1150250-1189290:1
so has part: feature:1150250-1150362:1:exon
so has part: feature:1158459-1159341:1:exon
so has part: feature:1184893-1185059:1:exon
so has part: feature:1185263-1185388:1:exon
so has part: feature:1186205-1186292:1:exon
so has part: feature:1186586-1186731:1:exon
so has part: feature:1187644-1189290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150250-1150362:1:exon

position:1150362:1
position: 1150362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1158459-1159341:1:exon

position:1158459:1
position: 1158459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159341:1
position: 1159341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1184893-1185059:1:exon

position:1184893:1
position: 1184893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185059:1
position: 1185059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1185263-1185388:1:exon

position:1185263:1
position: 1185263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185388:1
position: 1185388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1186205-1186292:1:exon

position:1186205:1
position: 1186205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186292:1
position: 1186292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1186586-1186731:1:exon

position:1186586:1
position: 1186586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186731:1
position: 1186731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1187644-1189290:1:exon

position:1187644:1
position: 1187644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor GATA-4
translation: MYPSLSAGSSGHGPPPGSYDPDSPGAFLPGAGAGGGPGPAAPSPPVFVPTPRMPTSVLDLPYLAGSGAGGPAGAPQGSLPGWGQPGPDGAAYTPPPGSPRVSFPTAPGPLAAAAAAAAAAAREAAAAAAVYGAGPGGAVGAAGLGGREPYGRASFPGTSFGGPYGYMAAASDVGASWGPAAPFDGPVLHSLPARAAPNPAARHPSLEMFDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNVNKAKTSTGPPSSETLPPPGSDAGGSSVPTARSEEMRPVKTEPGVSPHYGPAGPMSQAFSVSTMAGHGATVHPVLSALKLSQQVYPPSASQPSPAGSKQDSWSGLAFSESHGDITA
SIO_010081: GATA4
subclass of: SO_0000673
so part of: GATA4
location: join(1158723..1159341,1184893..1185059,1185263..1185388,1186205..1186292,1186586..1186731,1187644..1187823)
location: region:1158723-1187823:1
so has part: feature:1158723-1159341:1:exon
so has part: feature:1184893-1185059:1:exon
so has part: feature:1185263-1185388:1:exon
so has part: feature:1186205-1186292:1:exon
so has part: feature:1186586-1186731:1:exon
so has part: feature:1187644-1187823:1:exon

XP_038626932.1
type: Protein
SIO_000068: ncbiprotein

position:1158723:1
position: 1158723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187823:1
position: 1187823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158723-1159341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184893-1185059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185263-1185388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186205-1186292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186586-1186731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187644-1187823:1:exon

NEIL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NEIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194191..1199462
location: region:1194191-1199462:1
so has part: feature:1194191-1199462:1:exon
subclass of: SO_0000010

119949646
type: Gene
SIO_000068: ncbigene

position:1194191:1
position: 1194191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199462:1
position: 1199462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194191-1199462:1:exon

NEIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NEIL2
product: nei like DNA glycosylase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771533.1
SIO_010081: NEIL2
subclass of: SO_0000673
so part of: NEIL2
location: join(1194191..1194333,1197570..1197766,1199061..1199462)
location: region:1194191-1199462:1
so has part: feature:1194191-1194333:1:exon
so has part: feature:1197570-1197766:1:exon
so has part: feature:1199061-1199462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194191-1194333:1:exon

position:1194333:1
position: 1194333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1197570-1197766:1:exon

position:1197570:1
position: 1197570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197766:1
position: 1197766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199061-1199462:1:exon

position:1199061:1
position: 1199061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NEIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 2
translation: MPEGPSLRHFHGRVSPFVGYLVVRAGGSSRKLPPALLQARMLQAAQVRLVLHFAQGGFLAFYNCCMVWAARPQARPSTDILSRGFHRGRALEALRQDQPVSFTLLDQRHFAGLGNIIKNEVLYLAGIHPLSPGSALSPTSLEALLDLVLQFSGDWLQAKQQGKRQSYRIYQRRCCPAGHPVTKQSLGPPGGLQRLTWWCPQCQPGIP
SIO_010081: NEIL2
subclass of: SO_0000673
so part of: NEIL2
location: join(1194191..1194333,1197570..1197766,1199061..1199344)
location: region:1194191-1199344:1
so has part: feature:1194191-1194333:1:exon
so has part: feature:1197570-1197766:1:exon
so has part: feature:1199061-1199344:1:exon

XP_038627461.1
type: Protein
SIO_000068: ncbiprotein

position:1199344:1
position: 1199344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194191-1194333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197570-1197766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199061-1199344:1:exon

FDFT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FDFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1202126..1214837
location: region:1202126-1214837:1
so has part: feature:1202126-1214837:1:exon
subclass of: SO_0000010

119949534
type: Gene
SIO_000068: ncbigene

position:1202126:1
position: 1202126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214837:1
position: 1214837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202126-1214837:1:exon

FDFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FDFT1
product: farnesyl-diphosphate farnesyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771391.1
SIO_010081: FDFT1
subclass of: SO_0000673
so part of: FDFT1
location: join(1202126..1202224,1205545..1205642,1207243..1207426,1210713..1210841,1211585..1211776,1212611..1212787,1214016..1214168,1214439..1214837)
location: region:1202126-1214837:1
so has part: feature:1202126-1202224:1:exon
so has part: feature:1205545-1205642:1:exon
so has part: feature:1207243-1207426:1:exon
so has part: feature:1210713-1210841:1:exon
so has part: feature:1211585-1211776:1:exon
so has part: feature:1212611-1212787:1:exon
so has part: feature:1214016-1214168:1:exon
so has part: feature:1214439-1214837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1202126-1202224:1:exon

position:1202224:1
position: 1202224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1205545-1205642:1:exon

position:1205545:1
position: 1205545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205642:1
position: 1205642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1207243-1207426:1:exon

position:1207243:1
position: 1207243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207426:1
position: 1207426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1210713-1210841:1:exon

position:1210713:1
position: 1210713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210841:1
position: 1210841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1211585-1211776:1:exon

position:1211585:1
position: 1211585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211776:1
position: 1211776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1212611-1212787:1:exon

position:1212611:1
position: 1212611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212787:1
position: 1212787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1214016-1214168:1:exon

position:1214016:1
position: 1214016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214168:1
position: 1214168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1214439-1214837:1:exon

position:1214439:1
position: 1214439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FDFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FDFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: squalene synthase
translation: MEFVKCLGHPEEFYNLLKFKMGGCKTVLSKMDQDSLSDSMKTCYRYLNETSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTISLETKVPMLVNFHSFLDQPDWRYLESKEKDRQVLEDFPTISLEFRNLSEKYRAVIAGTCQEMGAGMAEFLEKKVDSQQDWDKYCHYVAGLVGIGLSRLFSASEMEDPVVGEDTKVANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKQLSDFTNPENVDLAVQCLNELVTNALHHVPDVLTYLSRLRNQSVFNFCAIPQVMAMATLAACYNNQQVFRGVVKIRKGQAVTLMMGATSLPAVHAIMSRYLEEIQRQIPISDPSSSKTEQIVSCALTLSLPGGRLTSRAHYSPIYVSCAMVLVALSWQYLSSLTQGPEDCLRTGEN
SIO_010081: FDFT1
subclass of: SO_0000673
so part of: FDFT1
location: join(1202126..1202224,1205545..1205642,1207243..1207426,1210713..1210841,1211585..1211776,1212611..1212787,1214016..1214168,1214439..1214660)
location: region:1202126-1214660:1
so has part: feature:1202126-1202224:1:exon
so has part: feature:1205545-1205642:1:exon
so has part: feature:1207243-1207426:1:exon
so has part: feature:1210713-1210841:1:exon
so has part: feature:1211585-1211776:1:exon
so has part: feature:1212611-1212787:1:exon
so has part: feature:1214016-1214168:1:exon
so has part: feature:1214439-1214660:1:exon

XP_038627319.1
type: Protein
SIO_000068: ncbiprotein

position:1214660:1
position: 1214660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202126-1202224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205545-1205642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207243-1207426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210713-1210841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211585-1211776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212611-1212787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1214016-1214168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1214439-1214660:1:exon

CTSB
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CTSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1217603..1229392)
location: region:1217603-1229392:-1
so has part: feature:1217603-1229392:-1:exon
subclass of: SO_0000010

119949651
type: Gene
SIO_000068: ncbigene

position:1217603:-1
position: 1217603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229392:-1
position: 1229392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217603-1229392:-1:exon

CTSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CTSB
product: cathepsin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038771538.1
SIO_010081: CTSB
subclass of: SO_0000673
so part of: CTSB
location: complement(join(1217603..1217765,1218424..1218552,1219022..1219138,1219315..1219461,1219755..1219840,1220555..1220673,1220932..1221049,1222024..1222109,1222381..1222536,1229324..1229392))
location: region:1217603-1229392:-1
so has part: feature:1229324-1229392:-1:exon
so has part: feature:1222381-1222536:-1:exon
so has part: feature:1222024-1222109:-1:exon
so has part: feature:1220932-1221049:-1:exon
so has part: feature:1220555-1220673:-1:exon
so has part: feature:1219755-1219840:-1:exon
so has part: feature:1219315-1219461:-1:exon
so has part: feature:1219022-1219138:-1:exon
so has part: feature:1218424-1218552:-1:exon
so has part: feature:1217603-1217765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1229324-1229392:-1:exon

position:1229324:-1
position: 1229324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222381-1222536:-1:exon

position:1222381:-1
position: 1222381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222536:-1
position: 1222536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1222024-1222109:-1:exon

position:1222024:-1
position: 1222024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222109:-1
position: 1222109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1220932-1221049:-1:exon

position:1220932:-1
position: 1220932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221049:-1
position: 1221049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1220555-1220673:-1:exon

position:1220555:-1
position: 1220555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220673:-1
position: 1220673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1219755-1219840:-1:exon

position:1219755:-1
position: 1219755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219840:-1
position: 1219840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1219315-1219461:-1:exon

position:1219315:-1
position: 1219315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219461:-1
position: 1219461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1219022-1219138:-1:exon

position:1219022:-1
position: 1219022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219138:-1
position: 1219138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1218424-1218552:-1:exon

position:1218424:-1
position: 1218424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218552:-1
position: 1218552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217603-1217765:-1:exon

position:1217765:-1
position: 1217765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CTSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin B
translation: MWQSVAVLCCLLALTSARAGASFLPLSLEMTNYINKLNTTWRAAHNFPHADMSYVKRLCGTFLNGPKLPERVGLANLDMKLPENFDARQQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRVCVHTNGQVSVEVSAEDLLTCCGLECGMGCNGGYPTGAWTYWTKKGLVSGGLYDSHVGCRPYSIPPCEHHVNGSRPPCSGEGGETPKCSKKCEDGYSPSYREDKHFGSNSYSVPSNEQEIMAEIYKNGPVEGAFSVYEDFLQYKSGVYQHMTGEEVGGHAIRILGWGVENGTPYWLAANSWNTDWGENGFFKILRGKDHCGIESEIVAGVPRTDLYWGRRS
SIO_010081: CTSB
subclass of: SO_0000673
so part of: CTSB
location: complement(join(1217665..1217765,1218424..1218552,1219022..1219138,1219315..1219461,1219755..1219840,1220555..1220673,1220932..1221049,1222024..1222109,1222381..1222506))
location: region:1217665-1222506:-1
so has part: feature:1222381-1222506:-1:exon
so has part: feature:1222024-1222109:-1:exon
so has part: feature:1220932-1221049:-1:exon
so has part: feature:1220555-1220673:-1:exon
so has part: feature:1219755-1219840:-1:exon
so has part: feature:1219315-1219461:-1:exon
so has part: feature:1219022-1219138:-1:exon
so has part: feature:1218424-1218552:-1:exon
so has part: feature:1217665-1217765:-1:exon

XP_038627466.1
type: Protein
SIO_000068: ncbiprotein

position:1217665:-1
position: 1217665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222506:-1
position: 1222506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222381-1222506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222024-1222109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220932-1221049:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220555-1220673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219755-1219840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1219315-1219461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1219022-1219138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218424-1218552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217665-1217765:-1:exon

LOC119949200
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1298736..1301364
location: region:1298736-1301364:1
so has part: feature:1298736-1301364:1:exon
subclass of: SO_0000010

119949200
type: Gene
SIO_000068: ncbigene

position:1298736:1
position: 1298736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301364:1
position: 1301364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298736-1301364:1:exon

LOC119949200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949200
product: defensin-B4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038770750.1
SIO_010081: LOC119949200
subclass of: SO_0000673
so part of: LOC119949200
location: join(1298736..1298793,1301123..1301364)
location: region:1298736-1301364:1
so has part: feature:1298736-1298793:1:exon
so has part: feature:1301123-1301364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298736-1298793:1:exon

position:1298793:1
position: 1298793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1301123-1301364:1:exon

position:1301123:1
position: 1301123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119949200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: defensin-B4-like
translation: MRASLLLLTLLVYLAHAPQAQGVFGPKRCKDKVGYCRHKCQPKEVQVSQCSNKVVCCGVNTGTGSSGDSKLVPAVNPQPNPQENEPEENPREEATTVSE
SIO_010081: LOC119949200
subclass of: SO_0000673
so part of: LOC119949200
location: join(1298736..1298793,1301123..1301364)
location: region:1298736-1301364:1
so has part: feature:1298736-1298793:1:exon
so has part: feature:1301123-1301364:1:exon

XP_038626678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1298736-1298793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301123-1301364:1:exon

LOC119949118
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1312202..1314468
location: region:1312202-1314468:1
so has part: feature:1312202-1314468:1:exon
subclass of: SO_0000010

119949118
type: Gene
SIO_000068: ncbigene

position:1312202:1
position: 1312202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314468:1
position: 1314468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312202-1314468:1:exon

LOC119949118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949118
product: beta-defensin 103A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_038770600.1
SIO_010081: LOC119949118
subclass of: SO_0000673
so part of: LOC119949118
location: join(1312202..1312259,1314323..1314468)
location: region:1312202-1314468:1
so has part: feature:1312202-1312259:1:exon
so has part: feature:1314323-1314468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312202-1312259:1:exon

position:1312259:1
position: 1312259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1314323-1314468:1:exon

position:1314323:1
position: 1314323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119949118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 103A-like
translation: MRLHYLLFAIFFLFLIPAPGDGRLLERINNLYCRVRRGRCRLLGCFPKEEQVGTCSLGRRKCCRKRT
SIO_010081: LOC119949118
subclass of: SO_0000673
so part of: LOC119949118
location: join(1312202..1312259,1314323..1314468)
location: region:1312202-1314468:1
so has part: feature:1312202-1312259:1:exon
so has part: feature:1314323-1314468:1:exon

XP_038626528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1312202-1312259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1314323-1314468:1:exon

LOC119949099
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1345423..1350464)
location: region:1345423-1350464:-1
so has part: feature:1345423-1350464:-1:exon
subclass of: SO_0000010

119949099
type: Gene
SIO_000068: ncbigene

position:1345423:-1
position: 1345423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350464:-1
position: 1350464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345423-1350464:-1:exon

LOC119949099
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949099
product: defensin-A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038770573.1
SIO_010081: LOC119949099
subclass of: SO_0000673
so part of: LOC119949099
location: complement(join(1345423..1345610,1349682..1349742,1350293..1350464))
location: region:1345423-1350464:-1
so has part: feature:1350293-1350464:-1:exon
so has part: feature:1349682-1349742:-1:exon
so has part: feature:1345423-1345610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350293-1350464:-1:exon

position:1350293:-1
position: 1350293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1349682-1349742:-1:exon

position:1349682:-1
position: 1349682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349742:-1
position: 1349742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345423-1345610:-1:exon

position:1345610:-1
position: 1345610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119949099
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: defensin-A1-like
translation: MQTLSSPLALLFLVTQTPDQPIGEGKEGGTIQEPEATEAQDAAAILMAARAVDCDASDAERRGSRKCHCRVSCYIFERP
SIO_010081: LOC119949099
subclass of: SO_0000673
so part of: LOC119949099
location: complement(join(1345604..1345610,1349682..1349742,1350293..1350464))
location: region:1345604-1350464:-1
so has part: feature:1350293-1350464:-1:exon
so has part: feature:1349682-1349742:-1:exon
so has part: feature:1345604-1345610:-1:exon

XP_038626501.1
type: Protein
SIO_000068: ncbiprotein

position:1345604:-1
position: 1345604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350293-1350464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349682-1349742:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345604-1345610:-1:exon

LOC119949199
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1361970..1362818
location: region:1361970-1362818:1
so has part: feature:1361970-1362818:1:exon
subclass of: SO_0000010

119949199
type: Gene
SIO_000068: ncbigene

position:1361970:1
position: 1361970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362818:1
position: 1362818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361970-1362818:1:exon

LOC119949199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119949199
product: defensin-A4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038770749.1
SIO_010081: LOC119949199
subclass of: SO_0000673
so part of: LOC119949199
location: join(1361970..1362159,1362709..1362818)
location: region:1361970-1362818:1
so has part: feature:1361970-1362159:1:exon
so has part: feature:1362709-1362818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1361970-1362159:1:exon

position:1362159:1
position: 1362159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1362709-1362818:1:exon

position:1362709:1
position: 1362709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119949199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119949199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: defensin-A4-like
translation: MKILHLLCSVLCLVTWTQVQGAEVREEFLVKDGQVDMPRVAGADQLLLNADAPQSFVLKTPSLGDHGARSCFCFCKPNCSDPEAQMGTCSSNRRLCCEC
SIO_010081: LOC119949199
subclass of: SO_0000673
so part of: LOC119949199
location: join(1361970..1362159,1362709..1362818)
location: region:1361970-1362818:1
so has part: feature:1361970-1362159:1:exon
so has part: feature:1362709-1362818:1:exon

XP_038626677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1361970-1362159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362709-1362818:1:exon

LOC119949683
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119949683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1364490..1367667)
location: region:1364490-1367667:-1
so has part: feature:1364490-1367667:-1:exon
subclass of: SO_0000011

119949683
type: Gene
SIO_000068: ncbigene

position:1364490:-1
position: 1364490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367667:-1
position: 1367667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364490-1367667:-1:exon

LOC119949683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119949683
product: uncharacterized LOC119949683
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005457239.1
SIO_010081: LOC119949683
subclass of: SO_0000673
so part of: LOC119949683
location: complement(join(1364490..1364765,1366253..1366491,1367211..1367667))
location: region:1364490-1367667:-1
so has part: feature:1367211-1367667:-1:exon
so has part: feature:1366253-1366491:-1:exon
so has part: feature:1364490-1364765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367211-1367667:-1:exon

position:1367211:-1
position: 1367211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366253-1366491:-1:exon

position:1366253:-1
position: 1366253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366491:-1
position: 1366491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1364490-1364765:-1:exon

position:1364765:-1
position: 1364765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AFAP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1375064..1407118)
location: region:1375064-1407118:-1
so has part: feature:1375064-1407118:-1:exon
subclass of: SO_0000010

119949365
type: Gene
SIO_000068: ncbigene

position:1375064:-1
position: 1375064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407118:-1
position: 1407118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1375064-1407118:-1:exon

AFAP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AFAP1L1
product: actin filament associated protein 1 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038771085.1
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1375064..1375339,1376734..1376862,1378345..1378523,1379125..1379289,1380166..1380277,1380584..1380656,1381541..1381686,1382711..1382922,1383593..1383745,1384649..1384742,1385264..1385353,1385967..1386146,1386592..1386803,1387377..1387475,1387904..1388015,1389186..1389274,1390024..1390107,1391424..1391552,1407052..1407118))
location: region:1375064-1407118:-1
so has part: feature:1407052-1407118:-1:exon
so has part: feature:1391424-1391552:-1:exon
so has part: feature:1390024-1390107:-1:exon
so has part: feature:1389186-1389274:-1:exon
so has part: feature:1387904-1388015:-1:exon
so has part: feature:1387377-1387475:-1:exon
so has part: feature:1386592-1386803:-1:exon
so has part: feature:1385967-1386146:-1:exon
so has part: feature:1385264-1385353:-1:exon
so has part: feature:1384649-1384742:-1:exon
so has part: feature:1383593-1383745:-1:exon
so has part: feature:1382711-1382922:-1:exon
so has part: feature:1381541-1381686:-1:exon
so has part: feature:1380584-1380656:-1:exon
so has part: feature:1380166-1380277:-1:exon
so has part: feature:1379125-1379289:-1:exon
so has part: feature:1378345-1378523:-1:exon
so has part: feature:1376734-1376862:-1:exon
so has part: feature:1375064-1375339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407052-1407118:-1:exon

position:1407052:-1
position: 1407052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1391424-1391552:-1:exon

position:1391424:-1
position: 1391424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391552:-1
position: 1391552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1390024-1390107:-1:exon

position:1390024:-1
position: 1390024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390107:-1
position: 1390107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1389186-1389274:-1:exon

position:1389186:-1
position: 1389186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389274:-1
position: 1389274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1387904-1388015:-1:exon

position:1387904:-1
position: 1387904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388015:-1
position: 1388015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1387377-1387475:-1:exon

position:1387377:-1
position: 1387377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387475:-1
position: 1387475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1386592-1386803:-1:exon

position:1386592:-1
position: 1386592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386803:-1
position: 1386803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1385967-1386146:-1:exon

position:1385967:-1
position: 1385967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386146:-1
position: 1386146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1385264-1385353:-1:exon

position:1385264:-1
position: 1385264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385353:-1
position: 1385353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1384649-1384742:-1:exon

position:1384649:-1
position: 1384649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384742:-1
position: 1384742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1383593-1383745:-1:exon

position:1383593:-1
position: 1383593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383745:-1
position: 1383745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1382711-1382922:-1:exon

position:1382711:-1
position: 1382711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382922:-1
position: 1382922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381541-1381686:-1:exon

position:1381541:-1
position: 1381541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381686:-1
position: 1381686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1380584-1380656:-1:exon

position:1380584:-1
position: 1380584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380656:-1
position: 1380656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1380166-1380277:-1:exon

position:1380166:-1
position: 1380166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380277:-1
position: 1380277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1379125-1379289:-1:exon

position:1379125:-1
position: 1379125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379289:-1
position: 1379289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1378345-1378523:-1:exon

position:1378345:-1
position: 1378345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378523:-1
position: 1378523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1376734-1376862:-1:exon

position:1376734:-1
position: 1376734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376862:-1
position: 1376862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1375064-1375339:-1:exon

position:1375339:-1
position: 1375339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AFAP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin filament-associated protein 1-like 1
translation: MDRTSVLELLLPELGLLLQLLDGEDLSPAALEKKAAVSAILQRTQPLPGKESAHLYLNTADLHNGPSFVESLFDEFDCDLGDLRDTPEDDGEETNSESAKSHELRNVSREPPPPLPTTPPPEDYYEEALPLGPGKAPEYITAQNGMSPPNSLEDGYYEDADSNYPGTQMNGEPKSSYNDSDAMSSSYESYDDEEEEDKGRQPAHQWPSEEASLHLVKDSRICAFLLRKKRFGQWARQLAVIREDKLMCYKSSKDRRPHLELALGTCNVLYVPKDGRRKRHELRFSPPGAEALVLAVQSKEQADEWLKVIREVSSPGGAGGSESPSSPLLPCRLDADKRLSQERQTSDSDSVGVGDGCSPVSWRETGEHARGKKSGLAELKGSVSRAAGRKINRIISFSKKKPPAEGTHTSSAEEDLLGCGSLRVLSRQCWRERWCRIQAHTLFVHKDRADLRSPLDTLDLRGCRLAPGFGHQHPFAFRILRGQRELAVLEANSSEDMGRWLGLLLVATGSPETPEALHYDYVDVETLASIVTASRHSFLFASSCPDRWVEPRVYDEVPYEKLQAEDPQRPAGAQVKRHASSCSEKSRRVDPQVKVKRHASSAQQYRYGKNRAEEDARRFLVEKEKLEGEKRSIRDELGSLRREKREVKEAMKTSSGKRLETLEQRAAALEAECREREERRIDLELRLTAVKESLKQSLAGGPALGLAVTGKAKSSDAGSKPSCGSSEPAVPVNCASELRKRRPSIAAASKGKVLQRAKEWEMKKT
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1375316..1375339,1376734..1376862,1378345..1378523,1379125..1379289,1380166..1380277,1380584..1380656,1381541..1381686,1382711..1382922,1383593..1383745,1384649..1384742,1385264..1385353,1385967..1386146,1386592..1386803,1387377..1387475,1387904..1388015,1389186..1389274,1390024..1390107,1391424..1391552,1407052..1407067))
location: region:1375316-1407067:-1
so has part: feature:1407052-1407067:-1:exon
so has part: feature:1391424-1391552:-1:exon
so has part: feature:1390024-1390107:-1:exon
so has part: feature:1389186-1389274:-1:exon
so has part: feature:1387904-1388015:-1:exon
so has part: feature:1387377-1387475:-1:exon
so has part: feature:1386592-1386803:-1:exon
so has part: feature:1385967-1386146:-1:exon
so has part: feature:1385264-1385353:-1:exon
so has part: feature:1384649-1384742:-1:exon
so has part: feature:1383593-1383745:-1:exon
so has part: feature:1382711-1382922:-1:exon
so has part: feature:1381541-1381686:-1:exon
so has part: feature:1380584-1380656:-1:exon
so has part: feature:1380166-1380277:-1:exon
so has part: feature:1379125-1379289:-1:exon
so has part: feature:1378345-1378523:-1:exon
so has part: feature:1376734-1376862:-1:exon
so has part: feature:1375316-1375339:-1:exon

XP_038627013.1
type: Protein
SIO_000068: ncbiprotein

position:1375316:-1
position: 1375316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407067:-1
position: 1407067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407052-1407067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1391424-1391552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390024-1390107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389186-1389274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1387904-1388015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1387377-1387475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1386592-1386803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1385967-1386146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1385264-1385353:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1384649-1384742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1383593-1383745:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1382711-1382922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381541-1381686:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1380584-1380656:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1380166-1380277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1379125-1379289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1378345-1378523:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1376734-1376862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1375316-1375339:-1:exon

ABLIM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1412628..1450491)
location: region:1412628-1450491:-1
so has part: feature:1412628-1450491:-1:exon
subclass of: SO_0000010

119949124
type: Gene
SIO_000068: ncbigene

position:1412628:-1
position: 1412628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450491:-1
position: 1450491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412628-1450491:-1:exon

ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038770623.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1412628..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1426319..1426448,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1412628-1450491:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450491:-1:exon

position:1450212:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:1438359-1438471:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

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SIO_000628: feature:1435606-1435699:-1:exon

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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1421290-1421354:-1:exon

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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:1419524-1419582:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1417696-1417756:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1417216-1417223:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:1416009-1416089:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:1412628-1413829:-1:exon

position:1413829:-1
position: 1413829
reference: sequence
type: ReverseStrandPosition
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038770622.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1412628..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1412628-1450491:-1
so has part: feature:1450212-1450491:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

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SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
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SIO_000628: feature:1433137-1433224:-1:exon

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SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

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SIO_000628: feature:1428735-1428806:-1:exon

urn:…
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SIO_000628: feature:1426319-1426448:-1:exon

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SIO_000300: 11
SIO_000628: feature:1425258-1425356:-1:exon

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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1420153-1420182:-1:exon

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SIO_000300: 17
SIO_000628: feature:1419524-1419582:-1:exon

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SIO_000300: 18
SIO_000628: feature:1417696-1417756:-1:exon

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SIO_000300: 19
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1412628-1413829:-1:exon

ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770621.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1412628..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1412628-1450491:-1
so has part: feature:1450212-1450491:-1:exon
so has part: feature:1441307-1441444:-1:exon
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so has part: feature:1435606-1435699:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450491:-1:exon

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SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

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SIO_000300: 3
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SIO_000628: feature:1438359-1438471:-1:exon

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SIO_000628: feature:1433137-1433224:-1:exon

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SIO_000628: feature:1431231-1431289:-1:exon

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SIO_000628: feature:1428735-1428806:-1:exon

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SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

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reference: sequence
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reference: sequence
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urn:…
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SIO_000628: feature:1426319-1426448:-1:exon

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SIO_000300: 13
SIO_000628: feature:1423272-1423322:-1:exon

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SIO_000300: 14
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SIO_000300: 17
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SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1412628-1413829:-1:exon

ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038770620.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1412628..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420547,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1412628-1450491:-1
so has part: feature:1450212-1450491:-1:exon
so has part: feature:1441307-1441444:-1:exon
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so has part: feature:1416009-1416089:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420433-1420547:-1:exon

position:1420547:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1412628-1413829:-1:exon

ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038770619.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1412628..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1412628-1450491:-1
so has part: feature:1450212-1450491:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1427811-1427966:-1:exon
so has part: feature:1427141-1427170:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1425258-1425356:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1412628-1413829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1425258-1425356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1412628-1413829:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X5
translation: MSTRAPYQQNLYNPGSGSPAIQCYRCGDTCKGEVVRVQNNHFHIRCFTCQVCGCDLAQSGFFFKNREYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCTVCRQPFPIGDKVTFRGKECVCQTCSLSLVSAKPVKVLGPSHCAGCSEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHAQFGIKCETCSRYISGRVLEAGGKHYHPGCARCVRCHQMFTEGEEMYLTGSEVWHPTCKQAARAEKKLKLRRMSETSISPPGSSIGSPNRVICDIHEGLDLRQRRASSPGYIDSPTYSRHGMSPTTPRSPHHYYRSAAGESSIYRRPPIYKRHATKSKTSEDIRQASEFLPAGSPDPYCHFESDFWTHQGSPKVPRARRFSAGGEEDDYDRSMHKIESGIGRLILKEEMKARSHSYADPWTPPRSSTGSREALYTTSYEASLNGSPRSHYLADSDPFISKSASLPAYRRNGLHRAPSSELFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNQLPKDVDRTRLERHLSPEEFRHIFGMAMSEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1413716..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1426319..1426448,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450224))
location: region:1413716-1450224:-1
so has part: feature:1450212-1450224:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1413716-1413829:-1:exon

XP_038626551.1
type: Protein
SIO_000068: ncbiprotein

position:1413716:-1
position: 1413716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450224:-1
position: 1450224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1413716-1413829:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X4
translation: MSTRAPYQQNLYNPGSGSPAIQCYRCGDTCKGEVVRVQNNHFHIRCFTCQVCGCDLAQSGFFFKNREYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCTVCRQPFPIGDKVTFRGKECVCQTCSLSLVSAKPVKVLGPSHCAGCSEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHAQFGIKCETCSRYISGRVLEAGGKHYHPGCARCVRCHQMFTEGEEMYLTGSEVWHPTCKQAARAEKKLKLRRMSETSISPPGSSIGSPNRVICDIHEGLDLRQRRASSPGYIDSPTYSRHGMSPTTPRSPHHYYRSGSESGRSSPFHSQLDVRSPTPTAYQAPKHFHIPAAGESSIYRRPPIYKRHATKSKTSEDIRQASEFLPAGSPDPYCHFESDFWTHQGSPKVPRARRFSAGGEEDDYDRSMHKIESGIGRLILKEEMKARSHSYADPWTPPRSSTGSREALYTTSYEASLNGSPRSHYLADSDPFISKSASLPAYRRNGLHRAPSSELFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNQLPKDVDRTRLERHLSPEEFRHIFGMAMSEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1413716..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450224))
location: region:1413716-1450224:-1
so has part: feature:1450212-1450224:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1425258-1425356:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1413716-1413829:-1:exon

XP_038626550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1425258-1425356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1413716-1413829:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X3
translation: MSTRAPYQQNLYNPGSGSPAIQCYRCGDTCKGEVVRVQNNHFHIRCFTCQVCGCDLAQSGFFFKNREYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCTVCRQPFPIGDKVTFRGKECVCQTCSLSLVSAKPVKVLGPSHCAGCSEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHAQFGIKCETCSRYISGRVLEAGGKHYHPGCARCVRCHQMFTEGEEMYLTGSEVWHPTCKQAARAEKKLKLRRMSETSISPPGSSIGSPNRVICAKVDHEILNYRDLAALPKVKGLYEVQHPDLSSYEPYPRYTSDEMLARWSCGESLGTLSPYSQDIHEGLDLRQRRASSPGYIDSPTYSRHGMSPTTPRSPHHYYRSAAGESSIYRRPPIYKRHATKSKTSEDIRQASEFLPAGSPDPYCHFESDFWTHQGSPKVPRARRFSAGGEEDDYDRSMHKIESGIGRLILKEEMKARSHSYADPWTPPRSSTGSREALYTTSYEASLNGSPRSHYLADSDPFISKSASLPAYRRNGLHRAPSSELFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNQLPKDVDRTRLERHLSPEEFRHIFGMAMSEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1413716..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450224))
location: region:1413716-1450224:-1
so has part: feature:1450212-1450224:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1427811-1427966:-1:exon
so has part: feature:1427141-1427170:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1413716-1413829:-1:exon

XP_038626549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1413716-1413829:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X2
translation: MSTRAPYQQNLYNPGSGSPAIQCYRCGDTCKGEVVRVQNNHFHIRCFTCQVCGCDLAQSGFFFKNREYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCTVCRQPFPIGDKVTFRGKECVCQTCSLSLVSAKPVKVLGPSHCAGCSEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHAQFGIKCETCSRYISGRVLEAGGKHYHPGCARCVRCHQMFTEGEEMYLTGSEVWHPTCKQAARAEKKLKLRRMSETSISPPGSSIGSPNRVICAKVDHEILNYRDLAALPKVKGLYEVQHPDLSSYEPYPRYTSDEMLARWSCGESLGTLSPYSQDIHEGLDLRQRRASSPGYIDSPTYSRHGMSPTTPRSPHHYYRSGSESGRSSPFHSQLDVRSPTPTAYQAPKHFHIPAAGESSIYRRPPIYKRHATKSKTSEDIRQASEFLPAGSPDPYCHFESDFWTHQGSPKVPRARRFSAGGEEDDYDRSMHKEEMKARSHSYADPWTPPRSSTGSREALYTTSYEASLNGSPRSHYLADSDPFISKSASLPAYRRNGLHRAPSSELFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNQLPKDVDRTRLERHLSPEEFRHIFGMAMSEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1413716..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420547,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450224))
location: region:1413716-1450224:-1
so has part: feature:1450212-1450224:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1427811-1427966:-1:exon
so has part: feature:1427141-1427170:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1425258-1425356:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420547:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1413716-1413829:-1:exon

XP_038626548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1425258-1425356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420433-1420547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1413716-1413829:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X1
translation: MSTRAPYQQNLYNPGSGSPAIQCYRCGDTCKGEVVRVQNNHFHIRCFTCQVCGCDLAQSGFFFKNREYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCTVCRQPFPIGDKVTFRGKECVCQTCSLSLVSAKPVKVLGPSHCAGCSEEIKHGQSLLALDKQWHVSCFKCQTCGVILTGEYISKDGVPYCEADYHAQFGIKCETCSRYISGRVLEAGGKHYHPGCARCVRCHQMFTEGEEMYLTGSEVWHPTCKQAARAEKKLKLRRMSETSISPPGSSIGSPNRVICAKVDHEILNYRDLAALPKVKGLYEVQHPDLSSYEPYPRYTSDEMLARWSCGESLGTLSPYSQDIHEGLDLRQRRASSPGYIDSPTYSRHGMSPTTPRSPHHYYRSGSESGRSSPFHSQLDVRSPTPTAYQAPKHFHIPAAGESSIYRRPPIYKRHATKSKTSEDIRQASEFLPAGSPDPYCHFESDFWTHQGSPKVPRARRFSAGGEEDDYDRSMHKIESGIGRLILKEEMKARSHSYADPWTPPRSSTGSREALYTTSYEASLNGSPRSHYLADSDPFISKSASLPAYRRNGLHRAPSSELFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNQLPKDVDRTRLERHLSPEEFRHIFGMAMSEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1413716..1413829,1416009..1416089,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450224))
location: region:1413716-1450224:-1
so has part: feature:1450212-1450224:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1427811-1427966:-1:exon
so has part: feature:1427141-1427170:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1425258-1425356:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416089:-1:exon
so has part: feature:1413716-1413829:-1:exon

XP_038626547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1425258-1425356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416009-1416089:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1413716-1413829:-1:exon

ABLIM3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005457172.1
SIO_010081: ABLIM3
so part of: ABLIM3
location: complement(join(1413811..1413829,1416009..1416126,1417216..1417223,1417696..1417756,1419524..1419582,1420153..1420182,1420433..1420580,1421290..1421354,1421704..1421823,1423272..1423322,1425258..1425356,1426319..1426448,1427141..1427170,1427811..1427966,1428735..1428806,1431231..1431289,1433137..1433224,1435606..1435699,1435945..1436071,1438359..1438471,1438845..1439028,1441307..1441444,1450212..1450491))
location: region:1413811-1450491:-1
so has part: feature:1450212-1450491:-1:exon
so has part: feature:1441307-1441444:-1:exon
so has part: feature:1438845-1439028:-1:exon
so has part: feature:1438359-1438471:-1:exon
so has part: feature:1435945-1436071:-1:exon
so has part: feature:1435606-1435699:-1:exon
so has part: feature:1433137-1433224:-1:exon
so has part: feature:1431231-1431289:-1:exon
so has part: feature:1428735-1428806:-1:exon
so has part: feature:1427811-1427966:-1:exon
so has part: feature:1427141-1427170:-1:exon
so has part: feature:1426319-1426448:-1:exon
so has part: feature:1425258-1425356:-1:exon
so has part: feature:1423272-1423322:-1:exon
so has part: feature:1421704-1421823:-1:exon
so has part: feature:1421290-1421354:-1:exon
so has part: feature:1420433-1420580:-1:exon
so has part: feature:1420153-1420182:-1:exon
so has part: feature:1419524-1419582:-1:exon
so has part: feature:1417696-1417756:-1:exon
so has part: feature:1417216-1417223:-1:exon
so has part: feature:1416009-1416126:-1:exon
so has part: feature:1413811-1413829:-1:exon

position:1413811:-1
position: 1413811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450212-1450491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1441307-1441444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438845-1439028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438359-1438471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435945-1436071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435606-1435699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433137-1433224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431231-1431289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428735-1428806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427811-1427966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427141-1427170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426319-1426448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1425258-1425356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1423272-1423322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1421704-1421823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1421290-1421354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420433-1420580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1420153-1420182:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419524-1419582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1417696-1417756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1417216-1417223:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416009-1416126:-1:exon

position:1416126:-1
position: 1416126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1413811-1413829:-1:exon

SH3TC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SH3TC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1461757..1484927
location: region:1461757-1484927:1
so has part: feature:1461757-1484927:1:exon
subclass of: SO_0000010

119949459
type: Gene
SIO_000068: ncbigene

position:1461757:1
position: 1461757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484927:1
position: 1484927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461757-1484927:1:exon

SH3TC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SH3TC2
product: SH3 domain and tetratricopeptide repeats 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771249.1
SIO_010081: SH3TC2
subclass of: SO_0000673
so part of: SH3TC2
location: join(1461757..1461809,1468284..1468373,1469957..1470084,1471515..1471620,1472462..1472605,1473867..1474068,1475357..1475430,1475907..1476102,1476237..1476814,1477250..1478929,1479396..1479570,1480089..1480239,1480714..1480836,1482421..1482571,1483242..1483438,1483922..1484927)
location: region:1461757-1484927:1
so has part: feature:1461757-1461809:1:exon
so has part: feature:1468284-1468373:1:exon
so has part: feature:1469957-1470084:1:exon
so has part: feature:1471515-1471620:1:exon
so has part: feature:1472462-1472605:1:exon
so has part: feature:1473867-1474068:1:exon
so has part: feature:1475357-1475430:1:exon
so has part: feature:1475907-1476102:1:exon
so has part: feature:1476237-1476814:1:exon
so has part: feature:1477250-1478929:1:exon
so has part: feature:1479396-1479570:1:exon
so has part: feature:1480089-1480239:1:exon
so has part: feature:1480714-1480836:1:exon
so has part: feature:1482421-1482571:1:exon
so has part: feature:1483242-1483438:1:exon
so has part: feature:1483922-1484927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1461757-1461809:1:exon

position:1461809:1
position: 1461809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1468284-1468373:1:exon

position:1468284:1
position: 1468284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468373:1
position: 1468373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469957-1470084:1:exon

position:1469957:1
position: 1469957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470084:1
position: 1470084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1471515-1471620:1:exon

position:1471515:1
position: 1471515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471620:1
position: 1471620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1472462-1472605:1:exon

position:1472462:1
position: 1472462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472605:1
position: 1472605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1473867-1474068:1:exon

position:1473867:1
position: 1473867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474068:1
position: 1474068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1475357-1475430:1:exon

position:1475357:1
position: 1475357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475430:1
position: 1475430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1475907-1476102:1:exon

position:1475907:1
position: 1475907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476102:1
position: 1476102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1476237-1476814:1:exon

position:1476237:1
position: 1476237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476814:1
position: 1476814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1477250-1478929:1:exon

position:1477250:1
position: 1477250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478929:1
position: 1478929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1479396-1479570:1:exon

position:1479396:1
position: 1479396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479570:1
position: 1479570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1480089-1480239:1:exon

position:1480089:1
position: 1480089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480239:1
position: 1480239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1480714-1480836:1:exon

position:1480714:1
position: 1480714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480836:1
position: 1480836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1482421-1482571:1:exon

position:1482421:1
position: 1482421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482571:1
position: 1482571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1483242-1483438:1:exon

position:1483242:1
position: 1483242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483438:1
position: 1483438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1483922-1484927:1:exon

position:1483922:1
position: 1483922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3TC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SH3TC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 2
translation: MTGKDPPSCAPTSTAEAPEQCIQTLSSPAVASGVALGFSVESRSTGRVNDRLQAAARTRLWSLENDSQEVEILFKELSARLLSIQTQKDQFLITFKTVDEIWKFSTYLNLGLVASCLEHLLLDGSFWLDTALVDDTEVRVEVGEAELAAMYLDLLLQEGHFFARALGPIRPAAGEEAEGLELRSGEMVCVQSPGTGPTWEVVSLSTGRRGLVPRSAVQPLPNPFQQWFLRTHPVSCRVAWHGGPVGPQQIRSGQCRAVDDCPGEGPDELSFCQGDTIQVVGLLVPGLQWFLGKSSLTGDVGFVRTEHVDLSSCKPLGQLSMFLGEDEPLFPGVREDDGSAHLSALTHTDIATVYRLSDGPLDPFSAPKPQIQRPQCQRPESWSRRSWSQSSQSLSSQRMRPRRRKPRSRRPRCQRPRSRSQRSWSQSSQTQRSRSLRPQSPRPESQSPQSRRPQSQRPQTQSSSFQTPRPRSQSSQSRGSRSQRPQSQRLRSQSSSSQRPRSQSSMLDDPGSSDSLLGGALDEDPTLTSSRSGSSDTTGLAEERHRPASLPLPEDFGEVDAGVTRVVPAAGSLDPVLTFLNQDGGPEPFRALYDLAACALPAAFPGASDEGELTAALEAARAGATHHHLPWARARLCFLLGRLSRSRLKLSQARVYFEEALRVLPSGFADLPLAAALHTHLAAVYLCQKVGPRGAALLGKAAALLVGQPVCGGPGAEDELAVIMYALREGIVAGSAPLESRACFLAARLLVRLGRGDEALPFVERLQLLTPAPGLPPALAPAPSDPIATALPLLYDRKYLPHLALAAARPRGPTVAPLPGWWLGLVLRSTTRLSAPRGVPGWGHISPLACPALRGALADARAREDIGWQRTLCLALARAHLQHGCPSGAFRCLSQAVVLAQRVGEAEVFESTLCLGWACVMAGQVGQALDVLGPLVRSPQGAGGHIQYGAMLNLLALALQRAGQVRAAGRHFALALSAAQEAGHGENQAVALANLGHLALTRRAPGLATHFLLRAARGFLRLPGGAGSEAGRVLLWLGRALVDCHQLAAGRMWYEMALLLGLESDHLETQLLAVESLCEMPGAAGPGPPTVYHEHRLVVARRLGDRGLEAQVLGTLSQLYQSWGSPRALQLALGFTKQRLKILIDLEDRAGAARAWLAAGRLHYLLHHDELVDLYLQAAIRTALTTEEPGLILNLYEEAGDVFFDGCHHRHRAAEFYREGAVPLARRAKATNTELRLFNKLTELQISLGAFEKALEVATLAARLSTIVGDQQQELVAFHRLATVYYFLQMYELAEDCYLKTLALCPPILQGAQEAMFYAKVYCRLGTLTYHQLKDAHDAAGYFWLALAAAMELGDEELQAAIRARLGAIQRSPLWEEASGGRSAERARWLSQGGRAI
SIO_010081: SH3TC2
subclass of: SO_0000673
so part of: SH3TC2
location: join(1461803..1461809,1468284..1468373,1469957..1470084,1471515..1471620,1472462..1472605,1473867..1474068,1475357..1475430,1475907..1476102,1476237..1476814,1477250..1478929,1479396..1479570,1480089..1480239,1480714..1480836,1482421..1482571,1483242..1483438,1483922..1484113)
location: region:1461803-1484113:1
so has part: feature:1461803-1461809:1:exon
so has part: feature:1468284-1468373:1:exon
so has part: feature:1469957-1470084:1:exon
so has part: feature:1471515-1471620:1:exon
so has part: feature:1472462-1472605:1:exon
so has part: feature:1473867-1474068:1:exon
so has part: feature:1475357-1475430:1:exon
so has part: feature:1475907-1476102:1:exon
so has part: feature:1476237-1476814:1:exon
so has part: feature:1477250-1478929:1:exon
so has part: feature:1479396-1479570:1:exon
so has part: feature:1480089-1480239:1:exon
so has part: feature:1480714-1480836:1:exon
so has part: feature:1482421-1482571:1:exon
so has part: feature:1483242-1483438:1:exon
so has part: feature:1483922-1484113:1:exon

XP_038627177.1
type: Protein
SIO_000068: ncbiprotein

position:1461803:1
position: 1461803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484113:1
position: 1484113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461803-1461809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1468284-1468373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469957-1470084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471515-1471620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1472462-1472605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1473867-1474068:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1475357-1475430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475907-1476102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476237-1476814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477250-1478929:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1479396-1479570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1480089-1480239:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1480714-1480836:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1482421-1482571:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1483242-1483438:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483922-1484113:1:exon

ADRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ADRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1529598..1581008)
location: region:1529598-1581008:-1
so has part: feature:1529598-1581008:-1:exon
subclass of: SO_0000010

119949656
type: Gene
SIO_000068: ncbigene

position:1529598:-1
position: 1529598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581008:-1
position: 1581008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529598-1581008:-1:exon

ADRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ADRB2
product: adrenoceptor beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038771543.1
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(join(1529598..1530548,1579761..1581008))
location: region:1529598-1581008:-1
so has part: feature:1579761-1581008:-1:exon
so has part: feature:1529598-1530548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1579761-1581008:-1:exon

position:1579761:-1
position: 1579761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529598-1530548:-1:exon

position:1530548:-1
position: 1530548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ADRB2
product: adrenoceptor beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038771544.1
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(join(1579439..1579825,1579857..1581008))
location: region:1579439-1581008:-1
so has part: feature:1579857-1581008:-1:exon
so has part: feature:1579439-1579825:-1:exon

position:1579439:-1
position: 1579439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579857-1581008:-1:exon

position:1579857:-1
position: 1579857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1579439-1579825:-1:exon

position:1579825:-1
position: 1579825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ADRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2 adrenergic receptor isoform X2
translation: MDAAGNASNSSAAAAWGEAWVAGLGLLMSLIVLAIVFGNVLVITAIAKFQRLQTVTNYFITSLACADLVMGLAVVPFGASHILMKMWQFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVVILVVWVVSALTSFLPIQMHWYRAEHAEAKRCYEEDTCCDFFTNQAYAVASSIISFYLPLVVMIFVYSRVFQVAQKQLRKIDRSEGRFHVQNSGQQADQPGRPGTRRTSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDEVIPKYVYILLNWVGYVNSAFNPLIYCRSPDFRYAFQELLCLRKVSSKMYVNGYSTNSNGRSDPAGEQNGFPLGREEEEEEDLGTVSGSAGPPPNSAGFLNCKGTVPNGNLDSRGRNPTTSDSSL
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(join(1579693..1579825,1579857..1580962))
location: region:1579693-1580962:-1
so has part: feature:1579857-1580962:-1:exon
so has part: feature:1579693-1579825:-1:exon

XP_038627472.1
type: Protein
SIO_000068: ncbiprotein

position:1579693:-1
position: 1579693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580962:-1
position: 1580962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579857-1580962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579693-1579825:-1:exon

ADRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ADRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2 adrenergic receptor isoform X1
translation: MDAAGNASNSSAAAAWGEAWVAGLGLLMSLIVLAIVFGNVLVITAIAKFQRLQTVTNYFITSLACADLVMGLAVVPFGASHILMKMWQFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVVILVVWVVSALTSFLPIQMHWYRAEHAEAKRCYEEDTCCDFFTNQAYAVASSIISFYLPLVVMIFVYSRVFQVAQKQLRKIDRSEGRFHVQNSGQQADQPGRPGTRRTSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDEVIPKYVYILLNWVGYVNSAFNPLIYCRSPDFRYAFQELLCLRKVSSKMYVNGYSTNSNGRSDPAGEQNGFPLGREEEEEEEQQEEEEEEQQPRDSERLCGTPPQLRGLFEL
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(1579763..1580962)
location: region:1579763-1580962:-1
so has part: feature:1579763-1580962:-1:exon

XP_038627471.1
type: Protein
SIO_000068: ncbiprotein

position:1579763:-1
position: 1579763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579763-1580962:-1:exon

PCDH12
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1610506..1619880
location: region:1610506-1619880:1
so has part: feature:1610506-1619880:1:exon
subclass of: SO_0000010

119949088
type: Gene
SIO_000068: ncbigene

position:1610506:1
position: 1610506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619880:1
position: 1619880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610506-1619880:1:exon

PCDH12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCDH12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038770551.1
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1610506..1613395,1614977..1615074,1617831..1617982,1619281..1619880)
location: region:1610506-1619880:1
so has part: feature:1610506-1613395:1:exon
so has part: feature:1614977-1615074:1:exon
so has part: feature:1617831-1617982:1:exon
so has part: feature:1619281-1619880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610506-1613395:1:exon

position:1613395:1
position: 1613395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1614977-1615074:1:exon

position:1614977:1
position: 1614977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615074:1
position: 1615074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1617831-1617982:1:exon

position:1617831:1
position: 1617831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617982:1
position: 1617982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition