Tachyglossus aculeatus isolate mTacAcu1 chromosome Y4, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome Y4, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052096.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052096.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027630.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 13944280
topology: linear
so has quality: SO_0000987
location: 1..13944280
location: region:1-13944280:1
RO_0002162: 9261

NC_052096
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13944280:1
position: 13944280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13944280:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: Y4
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

BDH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: BDH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87280..128943)
location: region:87280-128943:-1
so has part: feature:87280-128943:-1:exon
subclass of: SO_0000010

119947354
type: Gene
SIO_000068: ncbigene

position:87280:-1
position: 87280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128943:-1
position: 128943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87280-128943:-1:exon

BDH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: BDH2
product: 3-hydroxybutyrate dehydrogenase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038769006.1
SIO_010081: BDH2
subclass of: SO_0000673
so part of: BDH2
location: complement(join(87280..87596,95795..95887,96736..96794,102785..102898,109460..109520,112632..112740,115271..115367,122985..123063,127142..127221,128850..128943))
location: region:87280-128943:-1
so has part: feature:128850-128943:-1:exon
so has part: feature:127142-127221:-1:exon
so has part: feature:122985-123063:-1:exon
so has part: feature:115271-115367:-1:exon
so has part: feature:112632-112740:-1:exon
so has part: feature:109460-109520:-1:exon
so has part: feature:102785-102898:-1:exon
so has part: feature:96736-96794:-1:exon
so has part: feature:95795-95887:-1:exon
so has part: feature:87280-87596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128850-128943:-1:exon

position:128850:-1
position: 128850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127142-127221:-1:exon

position:127142:-1
position: 127142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127221:-1
position: 127221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122985-123063:-1:exon

position:122985:-1
position: 122985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123063:-1
position: 123063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:115271-115367:-1:exon

position:115271:-1
position: 115271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115367:-1
position: 115367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112632-112740:-1:exon

position:112632:-1
position: 112632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112740:-1
position: 112740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:109460-109520:-1:exon

position:109460:-1
position: 109460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109520:-1
position: 109520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102785-102898:-1:exon

position:102785:-1
position: 102785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102898:-1
position: 102898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:96736-96794:-1:exon

position:96736:-1
position: 96736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96794:-1
position: 96794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95795-95887:-1:exon

position:95795:-1
position: 95795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95887:-1
position: 95887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87280-87596:-1:exon

position:87596:-1
position: 87596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BDH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: BDH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-hydroxybutyrate dehydrogenase type 2
translation: MGRLDGKVIVLTAAAQGIGWAAALAFAKEGAKVIATDISEARLRELEDCLGIQTRILDVTKKEQIEEFSKEVESLDVLFNVAGFVHHGTILECEEKDWDFSMNPNVRSMYLMIKVFLPKMLAQKSGNIINMSSVASSIKGVVNRCVYSTSKAAVIGLTKSVAADFIHQGIRCNCICPGTVDTPSLRDRIQARPDPEQALSDFVARQKTGRMATAEEVALLCVYLASDEAAYVTGNEMIIDGGWSL
SIO_010081: BDH2
subclass of: SO_0000673
so part of: BDH2
location: complement(join(87543..87596,95795..95887,96736..96794,102785..102898,109460..109520,112632..112740,115271..115367,122985..123063,127142..127213))
location: region:87543-127213:-1
so has part: feature:127142-127213:-1:exon
so has part: feature:122985-123063:-1:exon
so has part: feature:115271-115367:-1:exon
so has part: feature:112632-112740:-1:exon
so has part: feature:109460-109520:-1:exon
so has part: feature:102785-102898:-1:exon
so has part: feature:96736-96794:-1:exon
so has part: feature:95795-95887:-1:exon
so has part: feature:87543-87596:-1:exon

XP_038624934.1
type: Protein
SIO_000068: ncbiprotein

position:87543:-1
position: 87543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127213:-1
position: 127213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127142-127213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122985-123063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115271-115367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112632-112740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109460-109520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102785-102898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96736-96794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95795-95887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87543-87596:-1:exon

LOC119947403
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192522..194998
location: region:192522-194998:1
so has part: feature:192522-194998:1:exon
subclass of: SO_0000010

119947403
type: Gene
SIO_000068: ncbigene

position:192522:1
position: 192522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194998:1
position: 194998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192522-194998:1:exon

LOC119947403
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119947403
product: olfactory receptor 4C12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038769083.1
SIO_010081: LOC119947403
subclass of: SO_0000673
so part of: LOC119947403
location: join(192522..192846,194853..194998)
location: region:192522-194998:1
so has part: feature:192522-192846:1:exon
so has part: feature:194853-194998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192522-192846:1:exon

position:192846:1
position: 192846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194853-194998:1:exon

position:194853:1
position: 194853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119947403
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119947403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4C12-like
translation: MVICKPLHYTTIMSRHLCSSLLALAWARGFLHATIHTLFMTHLPFCGPSVIDHFMCDLYPLLKLFCSDTHTLSVLVAANSSGMCMLIFILLMIFYAFILPSLKTHSAVGYLPPYTQTRISNSDTYLNTDPKFFTSLNDAKVEKEVENIIKTIKASF
SIO_010081: LOC119947403
subclass of: SO_0000673
so part of: LOC119947403
location: join(192522..192846,194853..194998)
location: region:192522-194998:1
so has part: feature:192522-192846:1:exon
so has part: feature:194853-194998:1:exon

XP_038625011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192522-192846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194853-194998:1:exon

LOC119947419
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947419
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(194073..194210)
location: region:194073-194210:-1
so has part: feature:194073-194210:-1:exon
subclass of: SO_0000578

119947419
type: Gene
SIO_000068: ncbigene

position:194073:-1
position: 194073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194210:-1
position: 194210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194073-194210:-1:exon

LOC119947419
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119947419
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456493.1
SIO_010081: LOC119947419
subclass of: SO_0000673
so part of: LOC119947419
location: complement(194073..194210)
location: region:194073-194210:-1
so has part: feature:194073-194210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194073-194210:-1:exon

LOC119946808
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119946808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 242841..247641
location: region:242841-247641:1
so has part: feature:242841-247641:1:exon
subclass of: SO_0000010

119946808
type: Gene
SIO_000068: ncbigene

position:242841:1
position: 242841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247641:1
position: 247641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242841-247641:1:exon

LOC119946808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119946808
product: olfactory receptor 4C15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768266.1
SIO_010081: LOC119946808
subclass of: SO_0000673
so part of: LOC119946808
location: join(242841..242917,243411..243525,247102..247641)
location: region:242841-247641:1
so has part: feature:242841-242917:1:exon
so has part: feature:243411-243525:1:exon
so has part: feature:247102-247641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242841-242917:1:exon

position:242917:1
position: 242917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243411-243525:1:exon

position:243411:1
position: 243411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243525:1
position: 243525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247102-247641:1:exon

position:247102:1
position: 247102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119946808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119946808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4C15-like
translation: MINRRKNESLRLDSCFSLVIAPKMIVHSLQERKTISYEGCMDQLFAEHFFARVEVFVLTVMACNRYVAICKPRTM
SIO_010081: LOC119946808
subclass of: SO_0000673
so part of: LOC119946808
location: join(243489..243525,247102..247292)
location: region:243489-247292:1
so has part: feature:243489-243525:1:exon
so has part: feature:247102-247292:1:exon

XP_038624194.1
type: Protein
SIO_000068: ncbiprotein

position:243489:1
position: 243489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247292:1
position: 247292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243489-243525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247102-247292:1:exon

LOC119947407
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 431945..434407
location: region:431945-434407:1
so has part: feature:431945-434407:1:exon

119947407
type: Gene
SIO_000068: ncbigene

position:431945:1
position: 431945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434407:1
position: 434407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431945-434407:1:exon

LOC119947407
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119947407
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119947407
subclass of: SO_0000673
so part of: LOC119947407
location: 431945..432342
location: region:431945-432342:1
so has part: feature:431945-432342:1:exon

position:432342:1
position: 432342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431945-432342:1:exon

LOC119947407
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119947407
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119947407
subclass of: SO_0000673
so part of: LOC119947407
location: 432399..433006
location: region:432399-433006:1
so has part: feature:432399-433006:1:exon

position:432399:1
position: 432399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433006:1
position: 433006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432399-433006:1:exon

LOC119947407
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119947407
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119947407
subclass of: SO_0000673
so part of: LOC119947407
location: 433443..434407
location: region:433443-434407:1
so has part: feature:433443-434407:1:exon

position:433443:1
position: 433443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433443-434407:1:exon

LOC119947123
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 892782..943362
location: region:892782-943362:1
so has part: feature:892782-943362:1:exon
subclass of: SO_0000010

119947123
type: Gene
SIO_000068: ncbigene

position:892782:1
position: 892782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943362:1
position: 943362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892782-943362:1:exon

LOC119947123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119947123
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768666.1
SIO_010081: LOC119947123
subclass of: SO_0000673
so part of: LOC119947123
location: join(892782..893044,940470..943362)
location: region:892782-943362:1
so has part: feature:892782-893044:1:exon
so has part: feature:940470-943362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892782-893044:1:exon

position:893044:1
position: 893044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940470-943362:1:exon

position:940470:1
position: 940470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119947123
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: LOC119947123
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005456474.1
SIO_010081: LOC119947123
so part of: LOC119947123
location: join(892782..893044,893793..893890)
location: region:892782-893890:1
so has part: feature:892782-893044:1:exon
so has part: feature:893793-893890:1:exon

position:893890:1
position: 893890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892782-893044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893793-893890:1:exon

position:893793:1
position: 893793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119947123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119947123
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768667.1
SIO_010081: LOC119947123
subclass of: SO_0000673
so part of: LOC119947123
location: join(893219..893284,940470..943362)
location: region:893219-943362:1
so has part: feature:893219-893284:1:exon
so has part: feature:940470-943362:1:exon

position:893219:1
position: 893219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893219-893284:1:exon

position:893284:1
position: 893284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940470-943362:1:exon

LOC119947123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119947123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
translation: MLKKQSVWLVLWGAIIFVSWNALLLFFFWTRPPPGGLAPASPFADDPASLTHEVIRLAQEAEVELERQRGLLQQIQEHSALWSQEQAGVVAVEAEATVGGPLAHPPTTPAPAALPVLVIACDRSTVRRCLDKLLHYRPSAEHFPIIVSQDCGHEETARVIASYSDNIMHIKQPDLGDLPMAPEHRKFQGYYKIARHYRWALSQIFRTFKYQAAIVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWHDNGKEQMVDAAQPDLIYRTDFFPGLGWLLLAELWDELEPKWPWAFWDDWMRQPEQRRERACLRPEISRTLTFGRKGVSQGQFFDQHLKFIKLNQGFVPFSQLDLSYLQREAYDRDFPARVYAAPVLQVEDLQANWLRELGEVRVQYSSRDSFKAFAKALGVMDDLKSGVPRAGYRGIVSFLFRGRRVYLAPPEDWAGYDPSWS
SIO_010081: LOC119947123
subclass of: SO_0000673
so part of: LOC119947123
location: 940618..941979
location: region:940618-941979:1
so has part: feature:940618-941979:1:exon

XP_038624594.1
type: Protein
SIO_000068: ncbiprotein

position:940618:1
position: 940618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941979:1
position: 941979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940618-941979:1:exon

LOC119947123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119947123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
translation: MLKKQSVWLVLWGAIIFVSWNALLLFFFWTRPPPGGLAPASPFADDPASLTHEVIRLAQEAEVELERQRGLLQQIQEHSALWSQEQAGVVAVEAEATVGGPLAHPPTTPAPAALPVLVIACDRSTVRRCLDKLLHYRPSAEHFPIIVSQDCGHEETARVIASYSDNIMHIKQPDLGDLPMAPEHRKFQGYYKIARHYRWALSQIFRTFKYQAAIVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWHDNGKEQMVDAAQPDLIYRTDFFPGLGWLLLAELWDELEPKWPWAFWDDWMRQPEQRRERACLRPEISRTLTFGRKGVSQGQFFDQHLKFIKLNQGFVPFSQLDLSYLQREAYDRDFPARVYAAPVLQVEDLQANWLRELGEVRVQYSSRDSFKAFAKALGVMDDLKSGVPRAGYRGIVSFLFRGRRVYLAPPEDWAGYDPSWS
SIO_010081: LOC119947123
subclass of: SO_0000673
so part of: LOC119947123
location: 940618..941979
location: region:940618-941979:1
so has part: feature:940618-941979:1:exon

XP_038624595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:940618-941979:1:exon

PPP1R11
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PPP1R11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 975122..980515
location: region:975122-980515:1
so has part: feature:975122-980515:1:exon
subclass of: SO_0000010

119947187
type: Gene
SIO_000068: ncbigene

position:975122:1
position: 975122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980515:1
position: 980515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975122-980515:1:exon

PPP1R11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R11
product: protein phosphatase 1 regulatory inhibitor subunit 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768764.1
SIO_010081: PPP1R11
subclass of: SO_0000673
so part of: PPP1R11
location: join(975122..975313,977529..977637,980205..980515)
location: region:975122-980515:1
so has part: feature:975122-975313:1:exon
so has part: feature:977529-977637:1:exon
so has part: feature:980205-980515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975122-975313:1:exon

position:975313:1
position: 975313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977529-977637:1:exon

position:977529:1
position: 977529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977637:1
position: 977637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:980205-980515:1:exon

position:980205:1
position: 980205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase PPP1R11
translation: MAEATAGLSETVTKPTENRSLTIKLRKRKPEKKVEWSSDTVDNEHLGRRSSKCCCIYEKPRVFGESSTESEDEDDEGCGHAHCVRGHHKGQPQRRTARDLPPNAPQPPGPLQPPPRPMHH
SIO_010081: PPP1R11
subclass of: SO_0000673
so part of: PPP1R11
location: join(975266..975313,977529..977637,980205..980410)
location: region:975266-980410:1
so has part: feature:975266-975313:1:exon
so has part: feature:977529-977637:1:exon
so has part: feature:980205-980410:1:exon

XP_038624692.1
type: Protein
SIO_000068: ncbiprotein

position:975266:1
position: 975266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980410:1
position: 980410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975266-975313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977529-977637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980205-980410:1:exon

RNF39
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RNF39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(982281..992756)
location: region:982281-992756:-1
so has part: feature:982281-992756:-1:exon
subclass of: SO_0000010

119947186
type: Gene
SIO_000068: ncbigene

position:982281:-1
position: 982281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992756:-1
position: 992756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982281-992756:-1:exon

RNF39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RNF39
product: ring finger protein 39
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768763.1
SIO_010081: RNF39
subclass of: SO_0000673
so part of: RNF39
location: complement(join(982281..982848,987334..987438,987536..987558,992374..992756))
location: region:982281-992756:-1
so has part: feature:992374-992756:-1:exon
so has part: feature:987536-987558:-1:exon
so has part: feature:987334-987438:-1:exon
so has part: feature:982281-982848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992374-992756:-1:exon

position:992374:-1
position: 992374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:987536-987558:-1:exon

position:987536:-1
position: 987536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987558:-1
position: 987558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:987334-987438:-1:exon

position:987334:-1
position: 987334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987438:-1
position: 987438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:982281-982848:-1:exon

position:982848:-1
position: 982848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RNF39
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(982678..982680),aa:OTHER)
transl except: (pos:complement(982429..982431),aa:OTHER)
product: LOW QUALITY PROTEIN: RING finger protein 39
translation: MEPVEPGRGLVAQLERLATCPLCGEAFRDPVLLACDYSFCRRCVGRWWDGQARAGAGPSCPGCGHPCPRRALRTNVRLAVDVRISRRLRHRLGDPGARDGRGPTPPPAAARRGGRIPTGRPHDPQAQDVLKTWRRFKIAKLKPMESDEEASKDYPCGQEHKNMLHRLSGDLTLDPSTAHHCLLLTXDHCSLHLRDPSVLALVDSPRHFNQLVGVLAAQGFEGGQHCXEVETVAGPGEGKDKGEGKGEDEGRRYALGVVDESVQSKDQVSLCLASEMLAVDWRRGQLWALMAPKATPLQGWLRQIQVDIDXERGHVAFYDSLSLSLLXVFQRPSSFGERVFPFFCTLDPHTLLHLVPIKG
SIO_010081: RNF39
subclass of: SO_0000673
so part of: RNF39
location: complement(join(982281..982848,987334..987438,987536..987558,992374..992756))
location: region:982281-992756:-1
so has part: feature:992374-992756:-1:exon
so has part: feature:987536-987558:-1:exon
so has part: feature:987334-987438:-1:exon
so has part: feature:982281-982848:-1:exon

XP_038624691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992374-992756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:987536-987558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:987334-987438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982281-982848:-1:exon

TRIM26
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRIM26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1009407..1015209)
location: region:1009407-1015209:-1
so has part: feature:1009407-1015209:-1:exon
subclass of: SO_0000010

119947408
type: Gene
SIO_000068: ncbigene

position:1009407:-1
position: 1009407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015209:-1
position: 1015209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009407-1015209:-1:exon

TRIM26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TRIM26
product: tripartite motif containing 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038769086.1
SIO_010081: TRIM26
subclass of: SO_0000673
so part of: TRIM26
location: complement(join(1009407..1009711,1009824..1009856,1010126..1010241,1010372..1010394,1010623..1010850,1013377..1013450,1015203..1015209))
location: region:1009407-1015209:-1
so has part: feature:1015203-1015209:-1:exon
so has part: feature:1013377-1013450:-1:exon
so has part: feature:1010623-1010850:-1:exon
so has part: feature:1010372-1010394:-1:exon
so has part: feature:1010126-1010241:-1:exon
so has part: feature:1009824-1009856:-1:exon
so has part: feature:1009407-1009711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015203-1015209:-1:exon

position:1015203:-1
position: 1015203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1013377-1013450:-1:exon

position:1013377:-1
position: 1013377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013450:-1
position: 1013450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010623-1010850:-1:exon

position:1010623:-1
position: 1010623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010850:-1
position: 1010850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010372-1010394:-1:exon

position:1010372:-1
position: 1010372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010394:-1
position: 1010394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010126-1010241:-1:exon

position:1010126:-1
position: 1010126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010241:-1
position: 1010241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1009824-1009856:-1:exon

position:1009824:-1
position: 1009824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009856:-1
position: 1009856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1009407-1009711:-1:exon

position:1009711:-1
position: 1009711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TRIM26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 26
translation: MESCKTTVIGYGSSYCHKILGSPARNGVWLEAERWKVVSMFEVMHQFLEGQECLLGKLEELEQDVRKGQEELVASVFAELAQLKTLISELEEKSQQEEAELLEGITGSLNRFQGRKFLKWNTISQEMERRMSGLSGKITFLQKNVKKFQGKLLRELESNPACPSSDLPKIVRTSELHFLQSNNASWFPETHFHVFLVPCNLASLPTLPTTRDTPGGLLATRQGHSPRLYLHVDVGESPDGACTKTRAQNPCYAHISDCQWS
SIO_010081: TRIM26
subclass of: SO_0000673
so part of: TRIM26
location: complement(join(1009407..1009711,1009824..1009856,1010126..1010241,1010372..1010394,1010623..1010850,1013377..1013450,1015203..1015209))
location: region:1009407-1015209:-1
so has part: feature:1015203-1015209:-1:exon
so has part: feature:1013377-1013450:-1:exon
so has part: feature:1010623-1010850:-1:exon
so has part: feature:1010372-1010394:-1:exon
so has part: feature:1010126-1010241:-1:exon
so has part: feature:1009824-1009856:-1:exon
so has part: feature:1009407-1009711:-1:exon

XP_038625014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015203-1015209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1013377-1013450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010623-1010850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010372-1010394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010126-1010241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009824-1009856:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009407-1009711:-1:exon

PPP1R10
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1036151..1056076)
location: region:1036151-1056076:-1
so has part: feature:1036151-1056076:-1:exon
subclass of: SO_0000010

119947139
type: Gene
SIO_000068: ncbigene

position:1036151:-1
position: 1036151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056076:-1
position: 1056076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036151-1056076:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768688.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054105..1054671,1056036..1056076))
location: region:1036151-1056076:-1
so has part: feature:1056036-1056076:-1:exon
so has part: feature:1054105-1054671:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1056036-1056076:-1:exon

position:1056036:-1
position: 1056036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054105-1054671:-1:exon

position:1054105:-1
position: 1054105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054671:-1
position: 1054671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

position:1046798:-1
position: 1046798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046915:-1
position: 1046915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

position:1046125:-1
position: 1046125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046211:-1
position: 1046211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

position:1045488:-1
position: 1045488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045623:-1
position: 1045623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

position:1045264:-1
position: 1045264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045315:-1
position: 1045315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

position:1043182:-1
position: 1043182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043259:-1
position: 1043259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

position:1042842:-1
position: 1042842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043015:-1
position: 1043015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

position:1042310:-1
position: 1042310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042415:-1
position: 1042415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

position:1042074:-1
position: 1042074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042186:-1
position: 1042186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

position:1041700:-1
position: 1041700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041800:-1
position: 1041800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

position:1041406:-1
position: 1041406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041553:-1
position: 1041553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

position:1041131:-1
position: 1041131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041289:-1
position: 1041289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

position:1040137:-1
position: 1040137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040383:-1
position: 1040383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

position:1038927:-1
position: 1038927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039002:-1
position: 1039002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

position:1038557:-1
position: 1038557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038754:-1
position: 1038754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

position:1038317:-1
position: 1038317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038422:-1
position: 1038422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

position:1038043:-1
position: 1038043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038165:-1
position: 1038165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

position:1037364:-1
position: 1037364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037810:-1
position: 1037810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

position:1037000:-1
position: 1037000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768686.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054105..1054671,1055339..1055424))
location: region:1036151-1055424:-1
so has part: feature:1055339-1055424:-1:exon
so has part: feature:1054105-1054671:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1055424:-1
position: 1055424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055339-1055424:-1:exon

position:1055339:-1
position: 1055339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054105-1054671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768691.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054634..1054671,1055339..1055418))
location: region:1036151-1055418:-1
so has part: feature:1055339-1055418:-1:exon
so has part: feature:1054634-1054671:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1055418:-1
position: 1055418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055339-1055418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054634-1054671:-1:exon

position:1054634:-1
position: 1054634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768689.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054105..1054131,1055339..1055394))
location: region:1036151-1055394:-1
so has part: feature:1055339-1055394:-1:exon
so has part: feature:1054105-1054131:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1055394:-1
position: 1055394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055339-1055394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054105-1054131:-1:exon

position:1054131:-1
position: 1054131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768694.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054634..1054671,1054916..1054971))
location: region:1036151-1054971:-1
so has part: feature:1054916-1054971:-1:exon
so has part: feature:1054634-1054671:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1054971:-1
position: 1054971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054916-1054971:-1:exon

position:1054916:-1
position: 1054916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054634-1054671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768687.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1054105..1054671,1054916..1054971))
location: region:1036151-1054971:-1
so has part: feature:1054916-1054971:-1:exon
so has part: feature:1054105-1054671:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054916-1054971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054105-1054671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768690.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046915,1051947..1052178))
location: region:1036151-1052178:-1
so has part: feature:1051947-1052178:-1:exon
so has part: feature:1046798-1046915:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1052178:-1
position: 1052178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051947-1052178:-1:exon

position:1051947:-1
position: 1051947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046798-1046915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R10
product: protein phosphatase 1 regulatory subunit 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768693.1
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036151..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042856..1043015,1043182..1043259,1045264..1045315,1045488..1045523))
location: region:1036151-1045523:-1
so has part: feature:1045488-1045523:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042856-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036151-1037000:-1:exon

position:1045523:-1
position: 1045523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045488-1045523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042856-1043015:-1:exon

position:1042856:-1
position: 1042856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036151-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624614.1
type: Protein
SIO_000068: ncbiprotein

position:1036891:-1
position: 1036891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046904:-1
position: 1046904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
translation: MGSSPADPKDLLKGLDSFLGRNGEVKSVDAISKIFGLMKEARKLVSRCTYLNIVLQTRSPDILTKFIRVGGYKLLNSWLTYSKTTNNGPLLRQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSENEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKEEGKSQTVPTERSAPEVKAEARPEEAPEKKREKPKSLRTTAPSHARFRSTGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042842..1043015,1043182..1043259,1045264..1045315,1045488..1045623,1046125..1046211,1046798..1046904))
location: region:1036891-1046904:-1
so has part: feature:1046798-1046904:-1:exon
so has part: feature:1046125-1046211:-1:exon
so has part: feature:1045488-1045623:-1:exon
so has part: feature:1045264-1045315:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042842-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046798-1046904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046125-1046211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045488-1045623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045264-1045315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042842-1043015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1036891-1037000:-1:exon

PPP1R10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X2
translation: MKNSANSLQSWSAIGWPSSGPRAAPSLLRKTRRSGRKKGRARQSLRSVLLPRSRLRRGLRRRQRRRERNPRACALQPPAMPGLELETPSLVPVKKNVSAVVVSDKYNLKPIPLKRQSSSPNPGAVVPPAEKKYKPLNTTPNTTKEIKVKIIPPQPVEGLGFLDALNSAPVPGIKIKKKKKVLSPTVAKLSLFEAKPRTGPSTAKPSSTEPGTASEPMDLERPGTPVPPIEVLELTDTASRDTRASDSKLMESPGGPAQFTRKGHKRKTVTWAEEGKLHEYFYFELDETERVNVNKIKDFGEAAKREMLKDRHAFETARRLSHDAMEEKVPWMSPQPLSLPRALVIPGSNSQECFVQAKREKGILQEIFLSKESVPDSPHEPDPETYEHIPPKLIPQDEECSVDEAPYGEGLEGSGVGHSPSGVGSSKLPPVLANLMGSMGASKSPQGQGAATSINMQEILTSIMGGPNSHPSEELLKEPDYSDKIKQLLRNLQPQGPRGVPHSLLGPAPMANGFPPAGLGGPGGPKDMQHFLPGPGGPMPGPHGSPGGPGGPVGPRLMGPPDLPPRGGNPFWDTPGDPMWGGPIRGGLPGPYHWGRGGRGGNEPPPPSPFRGGRGGRSGGGPLNGRGGPSGGMGGDGHRPHDGHVHGHGPPGHRGHNHRVPHPHDHRGHDGPGHGSSHRGHDSGHGHGGDMSSRPICRHFMMKGSCRYENNCAFYHPGVNGPPLP
SIO_010081: PPP1R10
subclass of: SO_0000673
so part of: PPP1R10
location: complement(join(1036891..1037000,1037364..1037810,1038043..1038165,1038317..1038422,1038557..1038754,1038927..1039002,1040137..1040383,1041131..1041289,1041406..1041553,1041700..1041800,1042074..1042186,1042310..1042415,1042856..1043015,1043182..1043259,1045264..1045269))
location: region:1036891-1045269:-1
so has part: feature:1045264-1045269:-1:exon
so has part: feature:1043182-1043259:-1:exon
so has part: feature:1042856-1043015:-1:exon
so has part: feature:1042310-1042415:-1:exon
so has part: feature:1042074-1042186:-1:exon
so has part: feature:1041700-1041800:-1:exon
so has part: feature:1041406-1041553:-1:exon
so has part: feature:1041131-1041289:-1:exon
so has part: feature:1040137-1040383:-1:exon
so has part: feature:1038927-1039002:-1:exon
so has part: feature:1038557-1038754:-1:exon
so has part: feature:1038317-1038422:-1:exon
so has part: feature:1038043-1038165:-1:exon
so has part: feature:1037364-1037810:-1:exon
so has part: feature:1036891-1037000:-1:exon

XP_038624621.1
type: Protein
SIO_000068: ncbiprotein

position:1045269:-1
position: 1045269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045264-1045269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1043182-1043259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1042856-1043015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042310-1042415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042074-1042186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041700-1041800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041406-1041553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041131-1041289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1040137-1040383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038927-1039002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1038557-1038754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1038317-1038422:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038043-1038165:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1037364-1037810:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036891-1037000:-1:exon

MRPS18B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MRPS18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1055427..1064404
location: region:1055427-1064404:1
so has part: feature:1055427-1064404:1:exon
subclass of: SO_0000010

119947140
type: Gene
SIO_000068: ncbigene

position:1055427:1
position: 1055427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064404:1
position: 1064404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055427-1064404:1:exon

MRPS18B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MRPS18B
product: mitochondrial ribosomal protein S18B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768695.1
SIO_010081: MRPS18B
subclass of: SO_0000673
so part of: MRPS18B
location: join(1055427..1055637,1058783..1058894,1059970..1060067,1060246..1060314,1060508..1060574,1062569..1062628,1063853..1064404)
location: region:1055427-1064404:1
so has part: feature:1055427-1055637:1:exon
so has part: feature:1058783-1058894:1:exon
so has part: feature:1059970-1060067:1:exon
so has part: feature:1060246-1060314:1:exon
so has part: feature:1060508-1060574:1:exon
so has part: feature:1062569-1062628:1:exon
so has part: feature:1063853-1064404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055427-1055637:1:exon

position:1055637:1
position: 1055637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058783-1058894:1:exon

position:1058783:1
position: 1058783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058894:1
position: 1058894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059970-1060067:1:exon

position:1059970:1
position: 1059970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060067:1
position: 1060067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060246-1060314:1:exon

position:1060246:1
position: 1060246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060314:1
position: 1060314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1060508-1060574:1:exon

position:1060508:1
position: 1060508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060574:1
position: 1060574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1062569-1062628:1:exon

position:1062569:1
position: 1062569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062628:1
position: 1062628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1063853-1064404:1:exon

position:1063853:1
position: 1063853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS18B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MRPS18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S18b, mitochondrial
translation: MRGGPLLALVPAPPLPSAKMAASVVATLLRGLRVLAPLRGASPAQAAPRAFCTEAPAKKEASPSTERISPFKDAPWEYLETEEYLARYGSRPVWANYRRNHKGGIPPQRTRKTCIRGDKVAGNPCPICRDQKLLVDYRNVKLLEQFICEHTGVIFHAPHTGVCMKQHKKLTQAIRQARDHGLLPFHIPVADLRDADFSNQHGAVTRTPPGPALAAGTPWYPWYAWQHPSDKEMARMRRLYRGYLREESGPPPERMPQVPRPAAAPVVGEEEPRSAGA
SIO_010081: MRPS18B
subclass of: SO_0000673
so part of: MRPS18B
location: join(1055503..1055637,1058783..1058894,1059970..1060067,1060246..1060314,1060508..1060574,1062569..1062628,1063853..1064145)
location: region:1055503-1064145:1
so has part: feature:1055503-1055637:1:exon
so has part: feature:1058783-1058894:1:exon
so has part: feature:1059970-1060067:1:exon
so has part: feature:1060246-1060314:1:exon
so has part: feature:1060508-1060574:1:exon
so has part: feature:1062569-1062628:1:exon
so has part: feature:1063853-1064145:1:exon

XP_038624623.1
type: Protein
SIO_000068: ncbiprotein

position:1055503:1
position: 1055503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064145:1
position: 1064145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055503-1055637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058783-1058894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059970-1060067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060246-1060314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060508-1060574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062569-1062628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063853-1064145:1:exon

ATAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1068271..1081740
location: region:1068271-1081740:1
so has part: feature:1068271-1081740:1:exon
subclass of: SO_0000010

119947040
type: Gene
SIO_000068: ncbigene

position:1068271:1
position: 1068271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081740:1
position: 1081740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1081740:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768524.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1079138..1079262,1079345..1079387,1081621..1081740)
location: region:1068271-1081740:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1081621-1081740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

position:1068384:1
position: 1068384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

position:1069388:1
position: 1069388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069448:1
position: 1069448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

position:1069706:1
position: 1069706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069797:1
position: 1069797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

position:1069915:1
position: 1069915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069975:1
position: 1069975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

position:1070498:1
position: 1070498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070611:1
position: 1070611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

position:1070714:1
position: 1070714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070815:1
position: 1070815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

position:1072807:1
position: 1072807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072852:1
position: 1072852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

position:1072980:1
position: 1072980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073051:1
position: 1073051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

position:1074945:1
position: 1074945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075016:1
position: 1075016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

position:1075361:1
position: 1075361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075604:1
position: 1075604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

position:1079138:1
position: 1079138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079262:1
position: 1079262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

position:1079345:1
position: 1079345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079387:1
position: 1079387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1081621-1081740:1:exon

position:1081621:1
position: 1081621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768521.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1079138..1079262,1079345..1079387,1080181..1080352)
location: region:1068271-1080352:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080352:1:exon

position:1080352:1
position: 1080352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080352:1:exon

position:1080181:1
position: 1080181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768518.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068271-1080305:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

position:1080305:1
position: 1080305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078574-1078695:1:exon

position:1078574:1
position: 1078574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078695:1
position: 1078695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768520.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068271-1080305:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005456467.1
SIO_010081: ATAT1
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1077479..1077637,1078574..1078659)
location: region:1068271-1078659:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1077479-1077637:1:exon
so has part: feature:1078574-1078659:1:exon

position:1078659:1
position: 1078659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077479-1077637:1:exon

position:1077479:1
position: 1077479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077637:1
position: 1077637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1078574-1078659:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768525.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1077479..1078055)
location: region:1068271-1078055:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1077479-1078055:1:exon

position:1078055:1
position: 1078055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077479-1078055:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768526.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1076470..1077472)
location: region:1068271-1077472:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1076470-1077472:1:exon

position:1077472:1
position: 1077472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076470-1077472:1:exon

position:1076470:1
position: 1076470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768527.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068271..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1074945..1075016,1075361..1075608)
location: region:1068271-1075608:1
so has part: feature:1068271-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075608:1:exon

position:1075608:1
position: 1075608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068271-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075608:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X5
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTSPSLALAAHHLPSLSHGGTPGLLAQSCCYSRYGGPSPPPPVPGTREQQRSEQEGTSRRSGGKEPAAGSGSPGSPRPSGPAGTGSNIF
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1079138..1079262,1079345..1079387,1081621..1081714)
location: region:1068278-1081714:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1081621-1081714:1:exon

XP_038624452.1
type: Protein
SIO_000068: ncbiprotein

position:1068278:1
position: 1068278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081714:1
position: 1081714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1081621-1081714:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X3
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTSPSLALAAHHLPSLSHGGTPGLLAQSCCYSRYGGPSPPPPVPGTREQQRSEQEGTSRPMFHKETSDPASSATTPLPPDSSFHPKVSQQTNHSNNGIKLMYNNFKLHIP
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1079138..1079262,1079345..1079387,1080181..1080337)
location: region:1068278-1080337:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080337:1:exon

XP_038624449.1
type: Protein
SIO_000068: ncbiprotein

position:1080337:1
position: 1080337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080337:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X1
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTRDEADSPWERWIAATRPSPLGSASSVTTGSQSIDCTFCSAHTPLSPWQPTTSPVSPTGGPRGCWPRAAATAATGAPALRPPSRGLGSNRGASRRGPAGPCSIRRHPILPHQQQLHSPLTQVFTPKYLSKQIIQIMVLN
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068278-1080305:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

XP_038624446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X2
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTRDEADSPWERWIAATRPSPLGSASSVTTGSQSIDCTFCSAHTPLSPWQPTTSPVSPTGGPRGCWPRAAATAATGAPALRPPSRGLGSNRGASRRGPAGPCSIRRHPILPHQQQLHSPLTQVFTPKYLSKQIIQIMVLN
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068278-1080305:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

XP_038624448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X6
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTRKKKAKMEKCLCLICSAGSCPPTSH
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1077479..1077554)
location: region:1068278-1077554:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1077479-1077554:1:exon

XP_038624453.1
type: Protein
SIO_000068: ncbiprotein

position:1077554:1
position: 1077554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077479-1077554:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X7
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTSSLTRPDGNRY
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1076470..1076503)
location: region:1068278-1076503:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1076470-1076503:1:exon

XP_038624454.1
type: Protein
SIO_000068: ncbiprotein

position:1076503:1
position: 1076503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076470-1076503:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X8
translation: MEFPFDVDALLPERITILDRHLRPPARRPGTTAPARVDLQQQLMTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTR
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068278..1068384,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1074945..1075016,1075361..1075608)
location: region:1068278-1075608:1
so has part: feature:1068278-1068384:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075608:1:exon

XP_038624455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068278-1068384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075608:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768522.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068697..1068850,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068697-1080305:1
so has part: feature:1068697-1068850:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

position:1068697:1
position: 1068697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068697-1068850:1:exon

position:1068850:1
position: 1068850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATAT1
product: alpha tubulin acetyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768523.1
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1068697..1068818,1069388..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1068697-1080305:1
so has part: feature:1068697-1068818:1:exon
so has part: feature:1069388-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068697-1068818:1:exon

position:1068818:1
position: 1068818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069388-1069448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X4
translation: MTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTRDEADSPWERWIAATRPSPLGSASSVTTGSQSIDCTFCSAHTPLSPWQPTTSPVSPTGGPRGCWPRAAATAATGAPALRPPSRGLGSNRGASRRGPAGPCSIRRHPILPHQQQLHSPLTQVFTPKYLSKQIIQIMVLN
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1069410..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1069410-1080305:1
so has part: feature:1069410-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

XP_038624450.1
type: Protein
SIO_000068: ncbiprotein

position:1069410:1
position: 1069410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069410-1069448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080305:1:exon

ATAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tubulin N-acetyltransferase 1 isoform X4
translation: MTVVDELGQASAKAQHLSSPITSATRMQSNRHVMYVLKDTAAHPAGKGAVIGFLKVGYKKLFVLDDRGAHNEVEPLCILDFYIHESAQRHGHGWDLFQYMLQKERVEPHQLAIDRPSEKLLRFLNKHYNLEATVPQVNNFVIFEGFFAHQHPGPPASSLRGNRSSLASSLDKTPNAPARKLPPKRAEEEIKPYSSSDRDFLKEAVEPPWPLNRAPRRALAPARPPPRSSSLGSSPERGPLRPFLPEQELLRSLRLCPPHPAARLLLATDPGGSPAQRRRTRDEADSPWERWIAATRPSPLGSASSVTTGSQSIDCTFCSAHTPLSPWQPTTSPVSPTGGPRGCWPRAAATAATGAPALRPPSRGLGSNRGASRRGPAGPCSIRRHPILPHQQQLHSPLTQVFTPKYLSKQIIQIMVLN
SIO_010081: ATAT1
subclass of: SO_0000673
so part of: ATAT1
location: join(1069410..1069448,1069706..1069797,1069915..1069975,1070498..1070611,1070714..1070815,1072807..1072852,1072980..1073051,1074945..1075016,1075361..1075604,1078574..1078695,1079138..1079262,1079345..1079387,1080181..1080305)
location: region:1069410-1080305:1
so has part: feature:1069410-1069448:1:exon
so has part: feature:1069706-1069797:1:exon
so has part: feature:1069915-1069975:1:exon
so has part: feature:1070498-1070611:1:exon
so has part: feature:1070714-1070815:1:exon
so has part: feature:1072807-1072852:1:exon
so has part: feature:1072980-1073051:1:exon
so has part: feature:1074945-1075016:1:exon
so has part: feature:1075361-1075604:1:exon
so has part: feature:1078574-1078695:1:exon
so has part: feature:1079138-1079262:1:exon
so has part: feature:1079345-1079387:1:exon
so has part: feature:1080181-1080305:1:exon

XP_038624451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1069410-1069448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069706-1069797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069915-1069975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070498-1070611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070714-1070815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072807-1072852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072980-1073051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074945-1075016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075361-1075604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078574-1078695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079138-1079262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079345-1079387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080181-1080305:1:exon

LOC119947041
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1080120..1081754)
location: region:1080120-1081754:-1
so has part: feature:1080120-1081754:-1:exon
subclass of: SO_0000011

119947041
type: Gene
SIO_000068: ncbigene

position:1080120:-1
position: 1080120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081754:-1
position: 1081754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080120-1081754:-1:exon

LOC119947041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119947041
product: uncharacterized LOC119947041
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005456468.1
SIO_010081: LOC119947041
subclass of: SO_0000673
so part of: LOC119947041
location: complement(join(1080120..1080533,1081555..1081754))
location: region:1080120-1081754:-1
so has part: feature:1081555-1081754:-1:exon
so has part: feature:1080120-1080533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081555-1081754:-1:exon

position:1081555:-1
position: 1081555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080120-1080533:-1:exon

position:1080533:-1
position: 1080533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CY4H6orf136
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CY4H6orf136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1082024..1087199
location: region:1082024-1087199:1
so has part: feature:1082024-1087199:1:exon
subclass of: SO_0000010

119947178
type: Gene
SIO_000068: ncbigene

position:1082024:1
position: 1082024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087199:1
position: 1087199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082024-1087199:1:exon

CY4H6orf136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CY4H6orf136
product: chromosome Y4 C6orf136 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768744.1
SIO_010081: CY4H6orf136
subclass of: SO_0000673
so part of: CY4H6orf136
location: join(1082024..1082146,1085211..1085585,1085995..1086083,1086367..1086567,1086721..1086790,1086915..1087199)
location: region:1082024-1087199:1
so has part: feature:1082024-1082146:1:exon
so has part: feature:1085211-1085585:1:exon
so has part: feature:1085995-1086083:1:exon
so has part: feature:1086367-1086567:1:exon
so has part: feature:1086721-1086790:1:exon
so has part: feature:1086915-1087199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082024-1082146:1:exon

position:1082146:1
position: 1082146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1085211-1085585:1:exon

position:1085211:1
position: 1085211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085585:1
position: 1085585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085995-1086083:1:exon

position:1085995:1
position: 1085995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086083:1
position: 1086083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086367-1086567:1:exon

position:1086367:1
position: 1086367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086567:1
position: 1086567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086721-1086790:1:exon

position:1086721:1
position: 1086721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086790:1
position: 1086790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1086915-1087199:1:exon

position:1086915:1
position: 1086915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CY4H6orf136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CY4H6orf136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C6orf136 homolog
translation: MYRPGRGPAAAAAAARGLGRCLRAYRARPQDQLASHSPPLLPPWIVSPPPVLPPDTPPFWARPPPRSGPRSPAPRAAAPHGIGPSSEAGEGGSGGLHGGCLDSLRSLFEGPPCPGPGALLPFRAPGDPHSAPATPSGDPRMEEHLAVMYERMRQELPNLFLRSHDYTLYSSDVEFVNEILNMRTKGRPWYILSLTLCRFLAWNYFAQLRLEVLRLSRHPEDWTLQARWRLVGLPAHVLFLRFYRRDREDLYRTYDAYSTFYLNSDGLIYRHRLDKLMPSHSPPAPVKKLLLATLVALGWAEPQPHLQLCPDP
SIO_010081: CY4H6orf136
subclass of: SO_0000673
so part of: CY4H6orf136
location: join(1082057..1082146,1085211..1085585,1085995..1086083,1086367..1086567,1086721..1086790,1086915..1087028)
location: region:1082057-1087028:1
so has part: feature:1082057-1082146:1:exon
so has part: feature:1085211-1085585:1:exon
so has part: feature:1085995-1086083:1:exon
so has part: feature:1086367-1086567:1:exon
so has part: feature:1086721-1086790:1:exon
so has part: feature:1086915-1087028:1:exon

XP_038624672.1
type: Protein
SIO_000068: ncbiprotein

position:1082057:1
position: 1082057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087028:1
position: 1087028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082057-1082146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1085211-1085585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1085995-1086083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086367-1086567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086721-1086790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086915-1087028:1:exon

DHX16
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DHX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1087369..1102724)
location: region:1087369-1102724:-1
so has part: feature:1087369-1102724:-1:exon
subclass of: SO_0000010

119947081
type: Gene
SIO_000068: ncbigene

position:1087369:-1
position: 1087369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102724:-1
position: 1102724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087369-1102724:-1:exon

DHX16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DHX16
product: DEAH-box helicase 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768594.1
SIO_010081: DHX16
subclass of: SO_0000673
so part of: DHX16
location: complement(join(1087369..1087622,1088424..1088597,1088885..1089019,1089135..1089297,1089380..1089447,1089552..1089670,1089991..1090153,1090261..1090401,1091405..1091557,1091659..1091757,1091895..1092105,1092985..1093100,1093265..1093375,1094410..1094604,1094760..1094981,1095341..1095595,1096125..1096181,1096582..1096747,1096910..1097178,1102493..1102724))
location: region:1087369-1102724:-1
so has part: feature:1102493-1102724:-1:exon
so has part: feature:1096910-1097178:-1:exon
so has part: feature:1096582-1096747:-1:exon
so has part: feature:1096125-1096181:-1:exon
so has part: feature:1095341-1095595:-1:exon
so has part: feature:1094760-1094981:-1:exon
so has part: feature:1094410-1094604:-1:exon
so has part: feature:1093265-1093375:-1:exon
so has part: feature:1092985-1093100:-1:exon
so has part: feature:1091895-1092105:-1:exon
so has part: feature:1091659-1091757:-1:exon
so has part: feature:1091405-1091557:-1:exon
so has part: feature:1090261-1090401:-1:exon
so has part: feature:1089991-1090153:-1:exon
so has part: feature:1089552-1089670:-1:exon
so has part: feature:1089380-1089447:-1:exon
so has part: feature:1089135-1089297:-1:exon
so has part: feature:1088885-1089019:-1:exon
so has part: feature:1088424-1088597:-1:exon
so has part: feature:1087369-1087622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102493-1102724:-1:exon

position:1102493:-1
position: 1102493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1096910-1097178:-1:exon

position:1096910:-1
position: 1096910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097178:-1
position: 1097178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096582-1096747:-1:exon

position:1096582:-1
position: 1096582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096747:-1
position: 1096747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1096125-1096181:-1:exon

position:1096125:-1
position: 1096125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096181:-1
position: 1096181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1095341-1095595:-1:exon

position:1095341:-1
position: 1095341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095595:-1
position: 1095595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1094760-1094981:-1:exon

position:1094760:-1
position: 1094760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094981:-1
position: 1094981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1094410-1094604:-1:exon

position:1094410:-1
position: 1094410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094604:-1
position: 1094604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1093265-1093375:-1:exon

position:1093265:-1
position: 1093265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093375:-1
position: 1093375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1092985-1093100:-1:exon

position:1092985:-1
position: 1092985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093100:-1
position: 1093100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1091895-1092105:-1:exon

position:1091895:-1
position: 1091895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092105:-1
position: 1092105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1091659-1091757:-1:exon

position:1091659:-1
position: 1091659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091757:-1
position: 1091757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1091405-1091557:-1:exon

position:1091405:-1
position: 1091405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091557:-1
position: 1091557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1090261-1090401:-1:exon

position:1090261:-1
position: 1090261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090401:-1
position: 1090401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1089991-1090153:-1:exon

position:1089991:-1
position: 1089991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090153:-1
position: 1090153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1089552-1089670:-1:exon

position:1089552:-1
position: 1089552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089670:-1
position: 1089670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1089380-1089447:-1:exon

position:1089380:-1
position: 1089380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089447:-1
position: 1089447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1089135-1089297:-1:exon

position:1089135:-1
position: 1089135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089297:-1
position: 1089297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1088885-1089019:-1:exon

position:1088885:-1
position: 1088885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089019:-1
position: 1089019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1088424-1088597:-1:exon

position:1088424:-1
position: 1088424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088597:-1
position: 1088597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1087369-1087622:-1:exon

position:1087622:-1
position: 1087622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DHX16
product: DEAH-box helicase 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038768593.1
SIO_010081: DHX16
subclass of: SO_0000673
so part of: DHX16
location: complement(join(1087369..1087622,1088424..1088597,1088885..1089046,1089135..1089297,1089380..1089447,1089552..1089670,1089991..1090153,1090261..1090401,1091405..1091557,1091659..1091757,1091895..1092105,1092985..1093100,1093265..1093375,1094410..1094604,1094760..1094981,1095341..1095595,1096125..1096181,1096582..1096747,1096910..1097178,1102493..1102724))
location: region:1087369-1102724:-1
so has part: feature:1102493-1102724:-1:exon
so has part: feature:1096910-1097178:-1:exon
so has part: feature:1096582-1096747:-1:exon
so has part: feature:1096125-1096181:-1:exon
so has part: feature:1095341-1095595:-1:exon
so has part: feature:1094760-1094981:-1:exon
so has part: feature:1094410-1094604:-1:exon
so has part: feature:1093265-1093375:-1:exon
so has part: feature:1092985-1093100:-1:exon
so has part: feature:1091895-1092105:-1:exon
so has part: feature:1091659-1091757:-1:exon
so has part: feature:1091405-1091557:-1:exon
so has part: feature:1090261-1090401:-1:exon
so has part: feature:1089991-1090153:-1:exon
so has part: feature:1089552-1089670:-1:exon
so has part: feature:1089380-1089447:-1:exon
so has part: feature:1089135-1089297:-1:exon
so has part: feature:1088885-1089046:-1:exon
so has part: feature:1088424-1088597:-1:exon
so has part: feature:1087369-1087622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102493-1102724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096910-1097178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096582-1096747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096125-1096181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1095341-1095595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094760-1094981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094410-1094604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1093265-1093375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092985-1093100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091895-1092105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1091659-1091757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091405-1091557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090261-1090401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089991-1090153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1089552-1089670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1089380-1089447:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089135-1089297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088885-1089046:-1:exon

position:1089046:-1
position: 1089046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1088424-1088597:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1087369-1087622:-1:exon

DHX16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DHX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X2
translation: MATPAGLEHWVEDELHAVLGLSERHLAPFLIGTARRCDSAEDFVRRLRDTGALAADGPARDFALTLWSKVPRKVLAERPARAAERAALALQEKNKAYRLLEDSEDSGPETQSAGAPAAPSASRKKRHLRRRRRREEEEEEDEEEREREAAGRAEKSRAGGSRAPTGEKAESEDEWERSERERLRDLEERDAFAQRVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDQKTMIPELRKKSRREYLAKREREKLEDLEAELADEEFLFGDQRLSGAERREIRYKRRVRDLAREYRAAGQQEKLEATNRYRMPEETRGPPAVETEVEEAGSGAPGEEQRRWEEARLGAATLRFGAKDAAPREPEYKLLLLDEEEEAAAAAIDFVCATRLDGDQEASAGSSPAGQAERDESIRAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTRDGMKIACTQPRRVAAMSVAARVAKEMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLGSYSVVMVDEAHERTLHTDVLFGLIKDVARFRPGLKVLVASATLDTARFATFFDDAPVFRIPGRRYPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDVLVFLTGQEEIETACEMLQDRCRRLGSKIRELLVLPIYANLPSDKQAKIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLVVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEDTTVPEIQRTSLGNVVLLLKSLGINDLIHFDFLDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMILASEQYGCSEEILTVAAMLSVNNAIFYRPKDKVVHADNARANFFVPGGDHLVLLNVYTQWCYENFVQLRSLRRARDVREQLEGLLERVEVGLTSCQGDHTRVRKAITAGYFYHTARLMRSGYRTVKQQQTVYIHPNSCLFEEQPRWLLYHELVFTTKEFMRQVLEIESSWLLEVAPHYYKARELEDPSAKKMPKKVGKVREELG
SIO_010081: DHX16
subclass of: SO_0000673
so part of: DHX16
location: complement(join(1087494..1087622,1088424..1088597,1088885..1089019,1089135..1089297,1089380..1089447,1089552..1089670,1089991..1090153,1090261..1090401,1091405..1091557,1091659..1091757,1091895..1092105,1092985..1093100,1093265..1093375,1094410..1094604,1094760..1094981,1095341..1095595,1096125..1096181,1096582..1096747,1096910..1097178,1102493..1102699))
location: region:1087494-1102699:-1
so has part: feature:1102493-1102699:-1:exon
so has part: feature:1096910-1097178:-1:exon
so has part: feature:1096582-1096747:-1:exon
so has part: feature:1096125-1096181:-1:exon
so has part: feature:1095341-1095595:-1:exon
so has part: feature:1094760-1094981:-1:exon
so has part: feature:1094410-1094604:-1:exon
so has part: feature:1093265-1093375:-1:exon
so has part: feature:1092985-1093100:-1:exon
so has part: feature:1091895-1092105:-1:exon
so has part: feature:1091659-1091757:-1:exon
so has part: feature:1091405-1091557:-1:exon
so has part: feature:1090261-1090401:-1:exon
so has part: feature:1089991-1090153:-1:exon
so has part: feature:1089552-1089670:-1:exon
so has part: feature:1089380-1089447:-1:exon
so has part: feature:1089135-1089297:-1:exon
so has part: feature:1088885-1089019:-1:exon
so has part: feature:1088424-1088597:-1:exon
so has part: feature:1087494-1087622:-1:exon

XP_038624522.1
type: Protein
SIO_000068: ncbiprotein

position:1087494:-1
position: 1087494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102699:-1
position: 1102699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102493-1102699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096910-1097178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096582-1096747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096125-1096181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1095341-1095595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094760-1094981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094410-1094604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1093265-1093375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092985-1093100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091895-1092105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1091659-1091757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091405-1091557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090261-1090401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089991-1090153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1089552-1089670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1089380-1089447:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089135-1089297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088885-1089019:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1088424-1088597:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1087494-1087622:-1:exon

DHX16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DHX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
translation: MATPAGLEHWVEDELHAVLGLSERHLAPFLIGTARRCDSAEDFVRRLRDTGALAADGPARDFALTLWSKVPRKVLAERPARAAERAALALQEKNKAYRLLEDSEDSGPETQSAGAPAAPSASRKKRHLRRRRRREEEEEEDEEEREREAAGRAEKSRAGGSRAPTGEKAESEDEWERSERERLRDLEERDAFAQRVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDQKTMIPELRKKSRREYLAKREREKLEDLEAELADEEFLFGDQRLSGAERREIRYKRRVRDLAREYRAAGQQEKLEATNRYRMPEETRGPPAVETEVEEAGSGAPGEEQRRWEEARLGAATLRFGAKDAAPREPEYKLLLLDEEEEAAAAAIDFVCATRLDGDQEASAGSSPAGQAERDESIRAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTRDGMKIACTQPRRVAAMSVAARVAKEMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLGSYSVVMVDEAHERTLHTDVLFGLIKDVARFRPGLKVLVASATLDTARFATFFDDAPVFRIPGRRYPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDVLVFLTGQEEIETACEMLQDRCRRLGSKIRELLVLPIYANLPSDKQAKIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLVVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEDTTVPEIQRTSLGNVVLLLKSLGINDLIHFDFLDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMILASEQYGCSEEILTVAAMLSVNNAIFYRPKDKVVHADNARANFFVPGGDHLVLLNVYTQWVDSGYSAQWCYENFVQLRSLRRARDVREQLEGLLERVEVGLTSCQGDHTRVRKAITAGYFYHTARLMRSGYRTVKQQQTVYIHPNSCLFEEQPRWLLYHELVFTTKEFMRQVLEIESSWLLEVAPHYYKARELEDPSAKKMPKKVGKVREELG
SIO_010081: DHX16
subclass of: SO_0000673
so part of: DHX16
location: complement(join(1087494..1087622,1088424..1088597,1088885..1089046,1089135..1089297,1089380..1089447,1089552..1089670,1089991..1090153,1090261..1090401,1091405..1091557,1091659..1091757,1091895..1092105,1092985..1093100,1093265..1093375,1094410..1094604,1094760..1094981,1095341..1095595,1096125..1096181,1096582..1096747,1096910..1097178,1102493..1102699))
location: region:1087494-1102699:-1
so has part: feature:1102493-1102699:-1:exon
so has part: feature:1096910-1097178:-1:exon
so has part: feature:1096582-1096747:-1:exon
so has part: feature:1096125-1096181:-1:exon
so has part: feature:1095341-1095595:-1:exon
so has part: feature:1094760-1094981:-1:exon
so has part: feature:1094410-1094604:-1:exon
so has part: feature:1093265-1093375:-1:exon
so has part: feature:1092985-1093100:-1:exon
so has part: feature:1091895-1092105:-1:exon
so has part: feature:1091659-1091757:-1:exon
so has part: feature:1091405-1091557:-1:exon
so has part: feature:1090261-1090401:-1:exon
so has part: feature:1089991-1090153:-1:exon
so has part: feature:1089552-1089670:-1:exon
so has part: feature:1089380-1089447:-1:exon
so has part: feature:1089135-1089297:-1:exon
so has part: feature:1088885-1089046:-1:exon
so has part: feature:1088424-1088597:-1:exon
so has part: feature:1087494-1087622:-1:exon

XP_038624521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102493-1102699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096910-1097178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096582-1096747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096125-1096181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1095341-1095595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094760-1094981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094410-1094604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1093265-1093375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092985-1093100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091895-1092105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1091659-1091757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091405-1091557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090261-1090401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089991-1090153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1089552-1089670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1089380-1089447:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089135-1089297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088885-1089046:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1088424-1088597:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1087494-1087622:-1:exon

PPP1R18
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PPP1R18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1110554..1120018)
location: region:1110554-1120018:-1
so has part: feature:1110554-1120018:-1:exon
subclass of: SO_0000010

119947410
type: Gene
SIO_000068: ncbigene

position:1110554:-1
position: 1110554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120018:-1
position: 1120018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110554-1120018:-1:exon

PPP1R18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PPP1R18
product: protein phosphatase 1 regulatory subunit 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038769089.1
SIO_010081: PPP1R18
subclass of: SO_0000673
so part of: PPP1R18
location: complement(join(1110554..1111383,1112787..1112994,1118615..1118782,1118828..1118980,1119035..1120018))
location: region:1110554-1120018:-1
so has part: feature:1119035-1120018:-1:exon
so has part: feature:1118828-1118980:-1:exon
so has part: feature:1118615-1118782:-1:exon
so has part: feature:1112787-1112994:-1:exon
so has part: feature:1110554-1111383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1119035-1120018:-1:exon

position:1119035:-1
position: 1119035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1118828-1118980:-1:exon

position:1118828:-1
position: 1118828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118980:-1
position: 1118980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1118615-1118782:-1:exon

position:1118615:-1
position: 1118615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118782:-1
position: 1118782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1112787-1112994:-1:exon

position:1112787:-1
position: 1112787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112994:-1
position: 1112994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1110554-1111383:-1:exon

position:1111383:-1
position: 1111383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PPP1R18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phostensin
translation: MAALPDWKVQLLARRRQEEAAVRGREQVERERLTQMPAWKRGLLERRRAKLGAPKAPTGPGPQAPDREAPDGEGPGTPGGEASVLLEAIGPVHQNRFIRQERRERQEHHREHHREHHREHQPHRQQRHRPGPGDERSLGPDGPGSRERRPGPGEPRDRRLSPGGEARARGPGPEEEEDDDDDEEEEEEEARERRPGPVEAAGWQPGQQEAREPSPGPAQPGRAEPRERRPRPAEAPEPASPFSDGREGRPGRGEGRAPSPSPSPSPGPTAGPAEAQAQTQTPLGAEAQAQTPLGAEAQAQTPLGAEARGRSPAPREAEEEEEEAGGAPPPPPPPAPPPPRDPLMSRLFYGVKAGPGAAGPGPPRRSGHTFTPGPPAAAFPPAGAPAPGPGPGRKRYPTVDEILVLGGYLTLSRSCLAKGTPETNRKQLSISFSETALETTYQYPSESAMLEELGPEPPAAPAVGEEEEEEEEEDEEAAALLQQELQGGLGTKALLVDESCRR
SIO_010081: PPP1R18
subclass of: SO_0000673
so part of: PPP1R18
location: complement(join(1111364..1111383,1112787..1112994,1118615..1118782,1118828..1118980,1119035..1119994))
location: region:1111364-1119994:-1
so has part: feature:1119035-1119994:-1:exon
so has part: feature:1118828-1118980:-1:exon
so has part: feature:1118615-1118782:-1:exon
so has part: feature:1112787-1112994:-1:exon
so has part: feature:1111364-1111383:-1:exon

XP_038625017.1
type: Protein
SIO_000068: ncbiprotein

position:1111364:-1
position: 1111364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119994:-1
position: 1119994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1119035-1119994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1118828-1118980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118615-1118782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1112787-1112994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1111364-1111383:-1:exon

NRM
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1121874..1128634)
location: region:1121874-1128634:-1
so has part: feature:1121874-1128634:-1:exon
subclass of: SO_0000010

119947246
type: Gene
SIO_000068: ncbigene

position:1121874:-1
position: 1121874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128634:-1
position: 1128634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121874-1128634:-1:exon

NRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NRM
product: nurim, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768857.1
SIO_010081: NRM
subclass of: SO_0000673
so part of: NRM
location: complement(join(1121874..1122318,1124094..1124270,1124494..1124687,1128508..1128634))
location: region:1121874-1128634:-1
so has part: feature:1128508-1128634:-1:exon
so has part: feature:1124494-1124687:-1:exon
so has part: feature:1124094-1124270:-1:exon
so has part: feature:1121874-1122318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1128508-1128634:-1:exon

position:1128508:-1
position: 1128508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124494-1124687:-1:exon

position:1124494:-1
position: 1124494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124687:-1
position: 1124687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124094-1124270:-1:exon

position:1124094:-1
position: 1124094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124270:-1
position: 1124270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1121874-1122318:-1:exon

position:1122318:-1
position: 1122318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NRM
product: nurim, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768856.1
SIO_010081: NRM
subclass of: SO_0000673
so part of: NRM
location: complement(join(1121874..1122318,1124094..1124270,1124494..1124687,1126028..1126216))
location: region:1121874-1126216:-1
so has part: feature:1126028-1126216:-1:exon
so has part: feature:1124494-1124687:-1:exon
so has part: feature:1124094-1124270:-1:exon
so has part: feature:1121874-1122318:-1:exon

position:1126216:-1
position: 1126216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126028-1126216:-1:exon

position:1126028:-1
position: 1126028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124494-1124687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124094-1124270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1121874-1122318:-1:exon

NRM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nurim isoform X2
translation: MAPAALLVPAALASFVLAFGTGVEFVRFASLRPLLGGRAPEPDARGWLAALRDPGVLGALAQDLGLLILFMAQHSLMAAEPVKAWAARRFGVLHRSLYVACTALALQVLMRCWEPVRGGPALWDARAEPWATWVPLFCFVLHTISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEPLALKSPGVQQLFAHLRHPVCVELLAVLWAVPRLGPDRLLLAALLTLYLGLAHGLDQRDLHYLRAQLRRKLDMLALPHHPAPAPAPAR
SIO_010081: NRM
subclass of: SO_0000673
so part of: NRM
location: complement(join(1122022..1122318,1124094..1124270,1124494..1124687,1128508..1128634))
location: region:1122022-1128634:-1
so has part: feature:1128508-1128634:-1:exon
so has part: feature:1124494-1124687:-1:exon
so has part: feature:1124094-1124270:-1:exon
so has part: feature:1122022-1122318:-1:exon

XP_038624785.1
type: Protein
SIO_000068: ncbiprotein

position:1122022:-1
position: 1122022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128508-1128634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124494-1124687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124094-1124270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122022-1122318:-1:exon

NRM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nurim isoform X1
translation: MVNPSTKPAESLQSRSTLSVSRLGEPRPWSFGKRVRESIPVASGPTSDTKYARGWLAALRDPGVLGALAQDLGLLILFMAQHSLMAAEPVKAWAARRFGVLHRSLYVACTALALQVLMRCWEPVRGGPALWDARAEPWATWVPLFCFVLHTISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEPLALKSPGVQQLFAHLRHPVCVELLAVLWAVPRLGPDRLLLAALLTLYLGLAHGLDQRDLHYLRAQLRRKLDMLALPHHPAPAPAPAR
SIO_010081: NRM
subclass of: SO_0000673
so part of: NRM
location: complement(join(1122022..1122318,1124094..1124270,1124494..1124687,1126028..1126178))
location: region:1122022-1126178:-1
so has part: feature:1126028-1126178:-1:exon
so has part: feature:1124494-1124687:-1:exon
so has part: feature:1124094-1124270:-1:exon
so has part: feature:1122022-1122318:-1:exon

XP_038624784.1
type: Protein
SIO_000068: ncbiprotein

position:1126178:-1
position: 1126178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126028-1126178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124494-1124687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124094-1124270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122022-1122318:-1:exon

MDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1130827..1146005)
location: region:1130827-1146005:-1
so has part: feature:1130827-1146005:-1:exon
subclass of: SO_0000010

119947235
type: Gene
SIO_000068: ncbigene

position:1130827:-1
position: 1130827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146005:-1
position: 1146005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130827-1146005:-1:exon

MDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MDC1
product: mediator of DNA damage checkpoint 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768843.1
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130827..1131118,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139477..1139587,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143591,1145922..1146005))
location: region:1130827-1146005:-1
so has part: feature:1145922-1146005:-1:exon
so has part: feature:1143455-1143591:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1139477-1139587:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130827-1131118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145922-1146005:-1:exon

position:1145922:-1
position: 1145922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1143455-1143591:-1:exon

position:1143455:-1
position: 1143455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143591:-1
position: 1143591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1141920-1142363:-1:exon

position:1141920:-1
position: 1141920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142363:-1
position: 1142363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1141728-1141803:-1:exon

position:1141728:-1
position: 1141728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141803:-1
position: 1141803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1139918-1141572:-1:exon

position:1139918:-1
position: 1139918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141572:-1
position: 1141572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1139769-1139840:-1:exon

position:1139769:-1
position: 1139769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139840:-1
position: 1139840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1139477-1139587:-1:exon

position:1139477:-1
position: 1139477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139587:-1
position: 1139587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1137381-1138544:-1:exon

position:1137381:-1
position: 1137381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138544:-1
position: 1138544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137242-1137285:-1:exon

position:1137242:-1
position: 1137242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137285:-1
position: 1137285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1135952-1137079:-1:exon

position:1135952:-1
position: 1135952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137079:-1
position: 1137079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1135418-1135540:-1:exon

position:1135418:-1
position: 1135418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135540:-1
position: 1135540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1135135-1135317:-1:exon

position:1135135:-1
position: 1135135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135317:-1
position: 1135317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1131504-1131629:-1:exon

position:1131504:-1
position: 1131504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131629:-1
position: 1131629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1131310-1131420:-1:exon

position:1131310:-1
position: 1131310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131420:-1
position: 1131420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1130827-1131118:-1:exon

position:1131118:-1
position: 1131118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MDC1
product: mediator of DNA damage checkpoint 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768842.1
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130827..1131118,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143591,1145922..1145986))
location: region:1130827-1145986:-1
so has part: feature:1145922-1145986:-1:exon
so has part: feature:1143455-1143591:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130827-1131118:-1:exon

position:1145986:-1
position: 1145986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145922-1145986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143455-1143591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141920-1142363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141728-1141803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139918-1141572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139769-1139840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1137381-1138544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137242-1137285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135952-1137079:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135418-1135540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135135-1135317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131504-1131629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131310-1131420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130827-1131118:-1:exon

MDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MDC1
product: mediator of DNA damage checkpoint 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038768840.1
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130827..1131088,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139477..1139587,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143591,1145922..1145986))
location: region:1130827-1145986:-1
so has part: feature:1145922-1145986:-1:exon
so has part: feature:1143455-1143591:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1139477-1139587:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130827-1131088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145922-1145986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143455-1143591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141920-1142363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141728-1141803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139918-1141572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139769-1139840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139477-1139587:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137381-1138544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137242-1137285:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135952-1137079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135418-1135540:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135135-1135317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131504-1131629:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1131310-1131420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1130827-1131088:-1:exon

position:1131088:-1
position: 1131088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of DNA damage checkpoint protein 1 isoform X2
translation: MDDTQVVDWGSGEEEVEGPHSPAVGLGTEPVGRLHLFSSVHGPEKDFLLSPGENVVGRVAGCAVTLPFPSISKRHAVIEAPGRGLPAVLRDCGSLNRTRLLRPPTLLQPGRAYRLRDRDLLLFADLPCQYHRLPPARGTLSVEETPRPPPARGALSVEETPQPQGRRVGRAEPRAAPLAEDSEEEEAEEAGRGDPPRNGTVGIAATASISPSTTVVPDSEEDGEALASAGPAPIPTLLLDSDTGEEEWGAAVAPGGTPRSAPARGGGPGEVAAGGRVPPTEDDSDTDVDGEGVPPTPAQGEQSLAPGVGDDDTDVGEEEEEEEGADVEERGPAAASTGTPLRTSQAAGARDVDRDGDDDEAEKDPAAATTGTPLEGSQAPVVGDSDTDAEEMGDGRGPAATPGTPLEKSQDSAEGNRDTDLVEEERGPVAATVRTPLEKSQVPMAGDGDTDLEEEAGEWDPALAATGTPLEKSSQAPMAEERDTDVEEGEEERGPAVATAGTPSRIRQAAGARDRDTDVDEEEEKSPVENTTGTPLEKSQTLVVGDSDTDGEEAGEERRPAVATIGTPLEKSQASAEGNRDTDVVEEERGPVAATTGTPLEKSQVSVAGDGDTDVEEEAGERGPAVAATGTPLEKSQASVAGEDDTVVEEERSLGEIGPPSPAPAGQGKDPEADEGGPAGGQGPGPAEDSQPCEEEDGRTAAGRPGARPAAGTPSREGQACGVPAGDAAGDSGSPLPPWSEGTRGPGPKPDGEPEQEEQEAEEDRADSCDDTSHLALQATQCFVGESERDLSCAGLHWDEAWEEEEEEEEILATQPFCPRGPGGQSEASETQPIAYYLAASGTQTSCPQAASGKRLSQAMLTQSPDRIPETQNMGKGPETQSPGGIPETQSPGGIPETQSPSRIPETQSPSRIPETQSPESGPETPSPEREPETHSPGRIPETQSPGRITETDSPERGPETQSPERGPETQSPEMEPETQSPERGPEAQNPNRGPETQSPGRTPETHRQARGPERQSPETESPERGSETQSAERNPMRQSPERRPETQSLARGPGRQSPEAQNPEKEPESQKQEAGGQIWVSERPELLGKAAPERMAHSQTPKAELERPMPEAARSESPGRGAQPEGQMPETEPLGQEAPPDAPGPDGPLEPEARSRGSPPAPTGVRSHHRPAAPTSGRSRKGRVKPESLPSSDSPAVGEEHVTSHPAPTEPKAAAPSLESAPGPGAPAISRRQVPEAPPVPRDLPGPAPGPAGPPDSASRTRRNQRRGTSRAPDASESPLPPDGAPQASLGRSPGSARPPRTTRSHPEAPPEPSPTLEPGTTPEPAPQVRRSRRRASLGAPPPSEPTVGPDPDPRTKRRRGTAGAAPAPQPEASVLPEPRATAESGLKPSRPSRTRQRCGVAAAGTETPVASETESPASTKPPVPPEPGTRREAGTVSEPYPPAKRRRGAAGDSPLSGPPPSEPRSAPEAPARAKRKRGAAGSSSEPEPPAPAEPRASPAPRSTRSRSRGEAGNLGSPPEPRSEAPAARSRKRPPPPEAEPPKRSRRGGAGPRGAPEPDGPPADAPKAREGEVYTRSPAGSPGPRRGPAAGTDDTPTGSRRSLRKTQRSEKPRVLFTGVVDPQGEQAVQALGGQLVGSVADATHLVTDRIRRTVKFLCALGRGLPIVDRSWLHQSRQAGRFLPPDEFAVDDPEQELNFGFSLREALSRARSRAMLQGYEIHVTPGVQPPPSQMREIIACCGGTLLAQMPRTFKPRRLVISCPQDLGRCCPAARAGLPLLSAEFLLTGVLRQETQPQPFTLPPPP
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130963..1131118,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143590))
location: region:1130963-1143590:-1
so has part: feature:1143455-1143590:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130963-1131118:-1:exon

XP_038624770.1
type: Protein
SIO_000068: ncbiprotein

position:1130963:-1
position: 1130963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143590:-1
position: 1143590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143455-1143590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141920-1142363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141728-1141803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139918-1141572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139769-1139840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1137381-1138544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1137242-1137285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135952-1137079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135418-1135540:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135135-1135317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1131504-1131629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131310-1131420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1130963-1131118:-1:exon

MDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of DNA damage checkpoint protein 1 isoform X1
translation: MDDTQVVDWGSGEEEVEGPHSPAVGLGTEPVGRLHLFSSVHGPEKDFLLSPGENVVGRVAGCAVTLPFPSISKRHAVIEAPGRGLPAVLRDCGSLNRTRLLRPPTLLQPGRAYRLRDRDLLLFADLPCQYHRLPPARGTLSVEETPRPPPARGALSVEETPQPQGRRVGRAEPRAAPLAEDSEEEEAEEAGRGDPPRNGTVGIAATASISPSTTVVPDSEEDGEALASAGPAPIPTLLLDSDTGEEEWGAAVAPGGTPRSAPARGGGPGEVAAGGRVPPTEDDSDTDVDGEGVPPTPAQGEQSLAPGVGDDDTDVGEEEEEEEGADVEERGPAAASTGTPLRTSQAAGARDVDRDGDDDEAEKDPAAATTGTPLEGSQAPVVGDSDTDAEEMGDGRGPAATPGTPLEKSQDSAEGNRDTDLVEEERGPVAATVRTPLEKSQVPMAGDGDTDLEEEAGEWDPALAATGTPLEKSSQAPMAEERDTDVEEGEEERGPAVATAGTPSRIRQAAGARDRDTDVDEEEEKSPVENTTGTPLEKSQTLVVGDSDTDGEEAGEERRPAVATIGTPLEKSQASAEGNRDTDVVEEERGPVAATTGTPLEKSQVSVAGDGDTDVEEEAGERGPAVAATGTPLEKSQASVAGEDDTVVEEERSLGEIGPPSPAPAGQGKDPEADEGGPAGGQGPGPAEDSQPCEEEDGRTAAGRPGARPAAGTPSREGQACGVPAGDAAGDSGSPLPPWSEGTRGPGPKPDGEPEQEEQEAEEDRADSCDDTSHLALQATQCFVGESERDLSCAADQSLEEESTQTFLFTPPPARLSVSHPHPSGQSTPSLGLHWDEAWEEEEEEEEILATQPFCPRGPGGQSEASETQPIAYYLAASGTQTSCPQAASGKRLSQAMLTQSPDRIPETQNMGKGPETQSPGGIPETQSPGGIPETQSPSRIPETQSPSRIPETQSPESGPETPSPEREPETHSPGRIPETQSPGRITETDSPERGPETQSPERGPETQSPEMEPETQSPERGPEAQNPNRGPETQSPGRTPETHRQARGPERQSPETESPERGSETQSAERNPMRQSPERRPETQSLARGPGRQSPEAQNPEKEPESQKQEAGGQIWVSERPELLGKAAPERMAHSQTPKAELERPMPEAARSESPGRGAQPEGQMPETEPLGQEAPPDAPGPDGPLEPEARSRGSPPAPTGVRSHHRPAAPTSGRSRKGRVKPESLPSSDSPAVGEEHVTSHPAPTEPKAAAPSLESAPGPGAPAISRRQVPEAPPVPRDLPGPAPGPAGPPDSASRTRRNQRRGTSRAPDASESPLPPDGAPQASLGRSPGSARPPRTTRSHPEAPPEPSPTLEPGTTPEPAPQVRRSRRRASLGAPPPSEPTVGPDPDPRTKRRRGTAGAAPAPQPEASVLPEPRATAESGLKPSRPSRTRQRCGVAAAGTETPVASETESPASTKPPVPPEPGTRREAGTVSEPYPPAKRRRGAAGDSPLSGPPPSEPRSAPEAPARAKRKRGAAGSSSEPEPPAPAEPRASPAPRSTRSRSRGEAGNLGSPPEPRSEAPAARSRKRPPPPEAEPPKRSRRGGAGPRGAPEPDGPPADAPKAREGEVYTRSPAGSPGPRRGPAAGTDDTPTGSRRSLRKTQRSEKPRVLFTGVVDPQGEQAVQALGGQLVGSVADATHLVTDRIRRTVKFLCALGRGLPIVDRSWLHQSRQAGRFLPPDEFAVDDPEQELNFGFSLREALSRARSRAMLQGYEIHVTPGVQPPPSQMREIIACCGGTLLAQMPRTFKDLGRCCPAARAGLPLLSAEFLLTGVLRQETQPQPFTLPPPP
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130963..1131088,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139477..1139587,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143590))
location: region:1130963-1143590:-1
so has part: feature:1143455-1143590:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1139477-1139587:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130963-1131088:-1:exon

XP_038624768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1143455-1143590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141920-1142363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141728-1141803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139918-1141572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139769-1139840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139477-1139587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1137381-1138544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137242-1137285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135952-1137079:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135418-1135540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135135-1135317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131504-1131629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131310-1131420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130963-1131088:-1:exon

MDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of DNA damage checkpoint protein 1 isoform X3
translation: MDDTQVVDWGSGEEEVEGPHSPAVGLGTEPVGRLHLFSSVHGPEKDFLLSPGENVVGRVAGCAVTLPFPSISKRHAVIEAPGRGLPAVLRDCGSLNRTRLLRPPTLLQPGRAYRLRDRDLLLFADLPCQYHRLPPARGTLSVEETPRPPPARGALSVEETPQPQGRRVGRAEPRAAPLAEDSEEEEAEEAGRGDPPRNGTVGIAATASISPSTTVVPDSEEDGEALASAGPAPIPTLLLDSDTGEEEWGAAVAPGGTPRSAPARGGGPGEVAAGGRVPPTEDDSDTDVDGEGVPPTPAQGEQSLAPGVGDDDTDVGEEEEEEEGADVEERGPAAASTGTPLRTSQAAGARDVDRDGDDDEAEKDPAAATTGTPLEGSQAPVVGDSDTDAEEMGDGRGPAATPGTPLEKSQDSAEGNRDTDLVEEERGPVAATVRTPLEKSQVPMAGDGDTDLEEEAGEWDPALAATGTPLEKSSQAPMAEERDTDVEEGEEERGPAVATAGTPSRIRQAAGARDRDTDVDEEEEKSPVENTTGTPLEKSQTLVVGDSDTDGEEAGEERRPAVATIGTPLEKSQASAEGNRDTDVVEEERGPVAATTGTPLEKSQVSVAGDGDTDVEEEAGERGPAVAATGTPLEKSQASVAGEDDTVVEEERSLGEIGPPSPAPAGQGKDPEADEGGPAGGQGPGPAEDSQPCEEEDGRTAAGRPGARPAAGTPSREGQACGVPAGDAAGDSGSPLPPWSEGTRGPGPKPDGEPEQEEQEAEEDRADSCDDTSHLALQATQCFVGESERDLSCAADQSLEEESTQTFLFTPPPARLSVSHPHPSGQSTPSLGLHWDEAWEEEEEEEEILATQPFCPRGPGGQSEASETQPIAYYLAASGTQTSCPQAASGKRLSQAMLTQSPDRIPETQNMGKGPETQSPGGIPETQSPGGIPETQSPSRIPETQSPSRIPETQSPESGPETPSPEREPETHSPGRIPETQSPGRITETDSPERGPETQSPERGPETQSPEMEPETQSPERGPEAQNPNRGPETQSPGRTPETHRQARGPERQSPETESPERGSETQSAERNPMRQSPERRPETQSLARGPGRQSPEAQNPEKEPESQKQEAGGQIWVSERPELLGKAAPERMAHSQTPKAELERPMPEAARSESPGRGAQPEGQMPETEPLGQEAPPDAPGPDGPLEPEARSRGSPPAPTGVRSHHRPAAPTSGRSRKGRVKPESLPSSDSPAVGEEHVTSHPAPTEPKAAAPSLESAPGPGAPAISRRQVPEAPPVPRDLPGPAPGPAGPPDSASRTRRNQRRGTSRAPDASESPLPPDGAPQASLGRSPGSARPPRTTRSHPEAPPEPSPTLEPGTTPEPAPQVRRSRRRASLGAPPPSEPTVGPDPDPRTKRRRGTAGAAPAPQPEASVLPEPRATAESGLKPSRPSRTRQRCGVAAAGTETPVASETESPASTKPPVPPEPGTRREAGTVSEPYPPAKRRRGAAGDSPLSGPPPSEPRSAPEAPARAKRKRGAAGSSSEPEPPAPAEPRASPAPRSTRSRSRGEAGNLGSPPEPRSEAPAARSRKRPPPPEAEPPKRSRRGGAGPRGAPEPDGPPADAPKAREGEVYTRSPAGSPGPRRGPAAGTDDTPTGSRRSLRKTQRSEKPRVLFTGVVDPQGEQAVQALGGQLVGSVADATHLVTDRIRRTVKFLCALGRGLPIVDRSWLHQSRQAGRFLPPDEFAVDDPEQELNFGFSLREALSRARSRAMLQGYEIHVTPGVQPPPSQMREIIACCGGTLLAQMPRTFKPRRLVISCPQDLGRCCPAARAGLPLLSAEFLLTGVLRQETQPQPFTLPPPP
SIO_010081: MDC1
subclass of: SO_0000673
so part of: MDC1
location: complement(join(1130963..1131118,1131310..1131420,1131504..1131629,1135135..1135317,1135418..1135540,1135952..1137079,1137242..1137285,1137381..1138544,1139477..1139587,1139769..1139840,1139918..1141572,1141728..1141803,1141920..1142363,1143455..1143590))
location: region:1130963-1143590:-1
so has part: feature:1143455-1143590:-1:exon
so has part: feature:1141920-1142363:-1:exon
so has part: feature:1141728-1141803:-1:exon
so has part: feature:1139918-1141572:-1:exon
so has part: feature:1139769-1139840:-1:exon
so has part: feature:1139477-1139587:-1:exon
so has part: feature:1137381-1138544:-1:exon
so has part: feature:1137242-1137285:-1:exon
so has part: feature:1135952-1137079:-1:exon
so has part: feature:1135418-1135540:-1:exon
so has part: feature:1135135-1135317:-1:exon
so has part: feature:1131504-1131629:-1:exon
so has part: feature:1131310-1131420:-1:exon
so has part: feature:1130963-1131118:-1:exon

XP_038624771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1143455-1143590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141920-1142363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141728-1141803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139918-1141572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139769-1139840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139477-1139587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1137381-1138544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137242-1137285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135952-1137079:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135418-1135540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135135-1135317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131504-1131629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131310-1131420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130963-1131118:-1:exon

TUBB
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TUBB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1154123..1158727
location: region:1154123-1158727:1
so has part: feature:1154123-1158727:1:exon
subclass of: SO_0000010

119947404
type: Gene
SIO_000068: ncbigene

position:1154123:1
position: 1154123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158727:1
position: 1158727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154123-1158727:1:exon

TUBB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TUBB
product: tubulin beta class I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 179 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038769084.1
SIO_010081: TUBB
subclass of: SO_0000673
so part of: TUBB
location: join(1154123..1154364,1155757..1155865,1156267..1156377,1157642..1158727)
location: region:1154123-1158727:1
so has part: feature:1154123-1154364:1:exon
so has part: feature:1155757-1155865:1:exon
so has part: feature:1156267-1156377:1:exon
so has part: feature:1157642-1158727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154123-1154364:1:exon

position:1154364:1
position: 1154364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155757-1155865:1:exon

position:1155757:1
position: 1155757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155865:1
position: 1155865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156267-1156377:1:exon

position:1156267:1
position: 1156267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156377:1
position: 1156377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1157642-1158727:1:exon

position:1157642:1
position: 1157642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TUBB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain
translation: MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
SIO_010081: TUBB
subclass of: SO_0000673
so part of: TUBB
location: join(1154308..1154364,1155757..1155865,1156267..1156377,1157642..1158699)
location: region:1154308-1158699:1
so has part: feature:1154308-1154364:1:exon
so has part: feature:1155757-1155865:1:exon
so has part: feature:1156267-1156377:1:exon
so has part: feature:1157642-1158699:1:exon

XP_038625012.1
type: Protein
SIO_000068: ncbiprotein

position:1154308:1
position: 1154308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158699:1
position: 1158699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154308-1154364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155757-1155865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156267-1156377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157642-1158699:1:exon

FLOT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FLOT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1159750..1171824)
location: region:1159750-1171824:-1
so has part: feature:1159750-1171824:-1:exon
subclass of: SO_0000010

119947405
type: Gene
SIO_000068: ncbigene

position:1159750:-1
position: 1159750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171824:-1
position: 1171824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159750-1171824:-1:exon

FLOT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FLOT1
product: flotillin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038769085.1
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: complement(join(1159750..1160002,1161014..1161178,1161310..1161447,1162376..1162421,1162541..1162722,1163675..1163827,1164078..1164173,1164738..1164857,1165956..1166099,1170726..1170816,1170893..1170969,1171503..1171563,1171810..1171824))
location: region:1159750-1171824:-1
so has part: feature:1171810-1171824:-1:exon
so has part: feature:1171503-1171563:-1:exon
so has part: feature:1170893-1170969:-1:exon
so has part: feature:1170726-1170816:-1:exon
so has part: feature:1165956-1166099:-1:exon
so has part: feature:1164738-1164857:-1:exon
so has part: feature:1164078-1164173:-1:exon
so has part: feature:1163675-1163827:-1:exon
so has part: feature:1162541-1162722:-1:exon
so has part: feature:1162376-1162421:-1:exon
so has part: feature:1161310-1161447:-1:exon
so has part: feature:1161014-1161178:-1:exon
so has part: feature:1159750-1160002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1171810-1171824:-1:exon

position:1171810:-1
position: 1171810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171503-1171563:-1:exon

position:1171503:-1
position: 1171503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171563:-1
position: 1171563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1170893-1170969:-1:exon

position:1170893:-1
position: 1170893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170969:-1
position: 1170969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1170726-1170816:-1:exon

position:1170726:-1
position: 1170726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170816:-1
position: 1170816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1165956-1166099:-1:exon

position:1165956:-1
position: 1165956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166099:-1
position: 1166099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1164738-1164857:-1:exon

position:1164738:-1
position: 1164738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164857:-1
position: 1164857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1164078-1164173:-1:exon

position:1164078:-1
position: 1164078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164173:-1
position: 1164173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1163675-1163827:-1:exon

position:1163675:-1
position: 1163675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163827:-1
position: 1163827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1162541-1162722:-1:exon

position:1162541:-1
position: 1162541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162722:-1
position: 1162722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1162376-1162421:-1:exon

position:1162376:-1
position: 1162376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162421:-1
position: 1162421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1161310-1161447:-1:exon

position:1161310:-1
position: 1161310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161447:-1
position: 1161447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1161014-1161178:-1:exon

position:1161014:-1
position: 1161014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161178:-1
position: 1161178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1159750-1160002:-1:exon

position:1160002:-1
position: 1160002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLOT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FLOT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: flotillin-1
translation: MFFTCGPNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKTEGEIAQIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIREAKAKQQKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQSDLAYQLQVAKTKQQIEEQRVQVQVVERAQQVALQEQEIARREKELEAQVKKPAEAERFRLERLAQAERAQLVMQAEAEAESVRMKGEAEAFAVEARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPLVAQEISGPLSSAKKITLVSSGQGAVGAAKVTGEVLDILNLLPDSVERLTGVSISQVNQHKLGLKA
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: complement(join(1159970..1160002,1161014..1161178,1161310..1161447,1162376..1162421,1162541..1162722,1163675..1163827,1164078..1164173,1164738..1164857,1165956..1166099,1170726..1170816,1170893..1170969,1171503..1171545))
location: region:1159970-1171545:-1
so has part: feature:1171503-1171545:-1:exon
so has part: feature:1170893-1170969:-1:exon
so has part: feature:1170726-1170816:-1:exon
so has part: feature:1165956-1166099:-1:exon
so has part: feature:1164738-1164857:-1:exon
so has part: feature:1164078-1164173:-1:exon
so has part: feature:1163675-1163827:-1:exon
so has part: feature:1162541-1162722:-1:exon
so has part: feature:1162376-1162421:-1:exon
so has part: feature:1161310-1161447:-1:exon
so has part: feature:1161014-1161178:-1:exon
so has part: feature:1159970-1160002:-1:exon

XP_038625013.1
type: Protein
SIO_000068: ncbiprotein

position:1159970:-1
position: 1159970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171545:-1
position: 1171545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171503-1171545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170893-1170969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170726-1170816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1165956-1166099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164738-1164857:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164078-1164173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1163675-1163827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1162541-1162722:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1162376-1162421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161310-1161447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161014-1161178:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1159970-1160002:-1:exon

IER3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1173852..1175490)
location: region:1173852-1175490:-1
so has part: feature:1173852-1175490:-1:exon
subclass of: SO_0000010

119947232
type: Gene
SIO_000068: ncbigene

position:1173852:-1
position: 1173852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175490:-1
position: 1175490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173852-1175490:-1:exon

IER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IER3
product: immediate early response 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038768837.1
SIO_010081: IER3
subclass of: SO_0000673
so part of: IER3
location: complement(join(1173852..1175024,1175296..1175490))
location: region:1173852-1175490:-1
so has part: feature:1175296-1175490:-1:exon
so has part: feature:1173852-1175024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175296-1175490:-1:exon

position:1175296:-1
position: 1175296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173852-1175024:-1:exon

position:1175024:-1
position: 1175024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: radiation-inducible immediate-early gene IEX-1
translation: MCHVRSPLPAPAAAAAAALAPPPSSRPRGPQIFTFDHLPEEAPSPPRLPSRGLRKRSRKVLYPRVVKRHVPVEDPNPAKRLLFILLTVVFCQILTAEEEMPVSAAPEVPPSAPSPGAPPSLEPLNLTVDPPDYTLDISQFLQQHPAAF
SIO_010081: IER3
subclass of: SO_0000673
so part of: IER3
location: complement(join(1174773..1175024,1175296..1175490))
location: region:1174773-1175490:-1
so has part: feature:1175296-1175490:-1:exon
so has part: feature:1174773-1175024:-1:exon

XP_038624765.1
type: Protein
SIO_000068: ncbiprotein

position:1174773:-1
position: 1174773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175296-1175490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174773-1175024:-1:exon

DDR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DDR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1232826..1253219
location: region:1232826-1253219:1
so has part: feature:1232826-1253219:1:exon
subclass of: SO_0000010

119947271
type: Gene
SIO_000068: ncbigene

position:1232826:1
position: 1232826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253219:1
position: 1253219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232826-1253219:1:exon

DDR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDR1
product: discoidin domain receptor tyrosine kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768890.1
SIO_010081: DDR1
subclass of: SO_0000673
so part of: DDR1
location: join(1232826..1232971,1236983..1237148,1237270..1237372,1239141..1239369,1241723..1241870,1242008..1242107,1243525..1243711,1244322..1244568,1245092..1245190,1246147..1246298,1246511..1246685,1247013..1247124,1248271..1248512,1248846..1248973,1250669..1250893,1251344..1251578,1252778..1252927,1253010..1253219)
location: region:1232826-1253219:1
so has part: feature:1232826-1232971:1:exon
so has part: feature:1236983-1237148:1:exon
so has part: feature:1237270-1237372:1:exon
so has part: feature:1239141-1239369:1:exon
so has part: feature:1241723-1241870:1:exon
so has part: feature:1242008-1242107:1:exon
so has part: feature:1243525-1243711:1:exon
so has part: feature:1244322-1244568:1:exon
so has part: feature:1245092-1245190:1:exon
so has part: feature:1246147-1246298:1:exon
so has part: feature:1246511-1246685:1:exon
so has part: feature:1247013-1247124:1:exon
so has part: feature:1248271-1248512:1:exon
so has part: feature:1248846-1248973:1:exon
so has part: feature:1250669-1250893:1:exon
so has part: feature:1251344-1251578:1:exon
so has part: feature:1252778-1252927:1:exon
so has part: feature:1253010-1253219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232826-1232971:1:exon

position:1232971:1
position: 1232971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1236983-1237148:1:exon

position:1236983:1
position: 1236983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237148:1
position: 1237148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237270-1237372:1:exon

position:1237270:1
position: 1237270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237372:1
position: 1237372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1239141-1239369:1:exon

position:1239141:1
position: 1239141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239369:1
position: 1239369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1241723-1241870:1:exon

position:1241723:1
position: 1241723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241870:1
position: 1241870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1242008-1242107:1:exon

position:1242008:1
position: 1242008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242107:1
position: 1242107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1243525-1243711:1:exon

position:1243525:1
position: 1243525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243711:1
position: 1243711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1244322-1244568:1:exon

position:1244322:1
position: 1244322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244568:1
position: 1244568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1245092-1245190:1:exon

position:1245092:1
position: 1245092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245190:1
position: 1245190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1246147-1246298:1:exon

position:1246147:1
position: 1246147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246298:1
position: 1246298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1246511-1246685:1:exon

position:1246511:1
position: 1246511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246685:1
position: 1246685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1247013-1247124:1:exon

position:1247013:1
position: 1247013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247124:1
position: 1247124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1248271-1248512:1:exon

position:1248271:1
position: 1248271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248512:1
position: 1248512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1248846-1248973:1:exon

position:1248846:1
position: 1248846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248973:1
position: 1248973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1250669-1250893:1:exon

position:1250669:1
position: 1250669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250893:1
position: 1250893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1251344-1251578:1:exon

position:1251344:1
position: 1251344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251578:1
position: 1251578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1252778-1252927:1:exon

position:1252778:1
position: 1252778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252927:1
position: 1252927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1253010-1253219:1:exon

position:1253010:1
position: 1253010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: epithelial discoidin domain-containing receptor 1
translation: MGRGPPTSRLPSLLLLLLLLLLTLGPWATPAQADMDGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAARHSRLESSDGDGAWCPAEPVFPAEAEYLQVDLRRLHLVALVGTQGRHAGGLGKEFSPGYRLRYSRDGHRWMSWKDRWGQEVISGNEDPGGVVLKDLGPPLVARLVRFYPRADRLMSVCLRVELYGCLWKDGLLSYTAPEGQTMYLSEAIHLNDSTYDGYSVSGLQYGGLGQLTDGVLGLDDFRRSRELRVWPGYDYVGWANASFPHGYVEMEFEFDRLRAFRAMQVHCNNMHRQGVRLPGGVDCRFKRGLASGWEEEPVRHTLAGGLGDPSARAVAVPLGGRVARFLQCRFFFAGPWLLFSEIAFLSDVVNGSSPVEFSLPSDGSAPPAPGPAPTNFSSLEAEPRGQQPVPKAEGSPTAILIGCLVAIILLLLLVIALMLWRQHWRRLLGKAERRVSEEELTVHLSVPGDTVLINNRPGPCEPPPYQEPRPRGGGGGPPPGPSAPHNGSALLLSNPAYRLLLATYARPPRGLGHPTPAWAKPTNTQACTGDYMEPEKPGAPLLPPPPSSVPHYAEADIVTLQGVTGGNTYAVPALPPGVVADGPPRGDFPRSRLRFKEKLGEGQFGEVHLCEVESPQDLLSLEFPLNVRKGRPLLVAVKILRSDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKVVAGGPGPGPGGAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGEHFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLTLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPTCPSALYELILRCWSREPEERPLFPQLHRCLAEDALNTV
SIO_010081: DDR1
subclass of: SO_0000673
so part of: DDR1
location: join(1237025..1237148,1237270..1237372,1239141..1239369,1241723..1241870,1242008..1242107,1243525..1243711,1244322..1244568,1245092..1245190,1246147..1246298,1246511..1246685,1247013..1247124,1248271..1248512,1248846..1248973,1250669..1250893,1251344..1251578,1252778..1252927,1253010..1253150)
location: region:1237025-1253150:1
so has part: feature:1237025-1237148:1:exon
so has part: feature:1237270-1237372:1:exon
so has part: feature:1239141-1239369:1:exon
so has part: feature:1241723-1241870:1:exon
so has part: feature:1242008-1242107:1:exon
so has part: feature:1243525-1243711:1:exon
so has part: feature:1244322-1244568:1:exon
so has part: feature:1245092-1245190:1:exon
so has part: feature:1246147-1246298:1:exon
so has part: feature:1246511-1246685:1:exon
so has part: feature:1247013-1247124:1:exon
so has part: feature:1248271-1248512:1:exon
so has part: feature:1248846-1248973:1:exon
so has part: feature:1250669-1250893:1:exon
so has part: feature:1251344-1251578:1:exon
so has part: feature:1252778-1252927:1:exon
so has part: feature:1253010-1253150:1:exon

XP_038624818.1
type: Protein
SIO_000068: ncbiprotein

position:1237025:1
position: 1237025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253150:1
position: 1253150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237025-1237148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237270-1237372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239141-1239369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241723-1241870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242008-1242107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243525-1243711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1244322-1244568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245092-1245190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246147-1246298:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246511-1246685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1247013-1247124:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1248271-1248512:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1248846-1248973:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1250669-1250893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1251344-1251578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1252778-1252927:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1253010-1253150:1:exon

GTF2H4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GTF2H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1258978..1267830
location: region:1258978-1267830:1
so has part: feature:1258978-1267830:1:exon
subclass of: SO_0000010

119947090
type: Gene
SIO_000068: ncbigene

position:1258978:1
position: 1258978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267830:1
position: 1267830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258978-1267830:1:exon

GTF2H4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GTF2H4
product: general transcription factor IIH subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038768612.1
SIO_010081: GTF2H4
subclass of: SO_0000673
so part of: GTF2H4
location: join(1258978..1259068,1260674..1260816,1260950..1261054,1261909..1262040,1262594..1262690,1262829..1262917,1263002..1263113,1263529..1263597,1263695..1263778,1263856..1263988,1264096..1264226,1264994..1265041,1265183..1265261,1267422..1267830)
location: region:1258978-1267830:1
so has part: feature:1258978-1259068:1:exon
so has part: feature:1260674-1260816:1:exon
so has part: feature:1260950-1261054:1:exon
so has part: feature:1261909-1262040:1:exon
so has part: feature:1262594-1262690:1:exon
so has part: feature:1262829-1262917:1:exon
so has part: feature:1263002-1263113:1:exon
so has part: feature:1263529-1263597:1:exon
so has part: feature:1263695-1263778:1:exon
so has part: feature:1263856-1263988:1:exon
so has part: feature:1264096-1264226:1:exon
so has part: feature:1264994-1265041:1:exon
so has part: feature:1265183-1265261:1:exon
so has part: feature:1267422-1267830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258978-1259068:1:exon

position:1259068:1
position: 1259068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1260674-1260816:1:exon

position:1260674:1
position: 1260674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260816:1
position: 1260816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1260950-1261054:1:exon

position:1260950:1
position: 1260950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261054:1
position: 1261054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1261909-1262040:1:exon

position:1261909:1
position: 1261909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262040:1
position: 1262040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1262594-1262690:1:exon

position:1262594:1
position: 1262594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262690:1
position: 1262690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1262829-1262917:1:exon

position:1262829:1
position: 1262829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262917:1
position: 1262917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1263002-1263113:1:exon

position:1263002:1
position: 1263002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263113:1
position: 1263113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1263529-1263597:1:exon

position:1263529:1
position: 1263529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263597:1
position: 1263597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1263695-1263778:1:exon

position:1263695:1
position: 1263695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263778:1
position: 1263778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1263856-1263988:1:exon

position:1263856:1
position: 1263856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263988:1
position: 1263988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1264096-1264226:1:exon

position:1264096:1
position: 1264096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264226:1
position: 1264226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1264994-1265041:1:exon

position:1264994:1
position: 1264994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265041:1
position: 1265041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1265183-1265261:1:exon

position:1265183:1
position: 1265183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265261:1
position: 1265261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1267422-1267830:1:exon

position:1267422:1
position: 1267422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTF2H4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GTF2H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIH subunit 4
translation: MAARDPGAMESGPLQTGLHRGKLQCRNLQEFLGGLSPGILDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSRLRLWHTQQLPGGLQGFILNPIFRQNLRVALLGGGQAWSDDTSQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQLLSQAGLMKSSEPGDPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQTRGMDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLSFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGATGTAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRAHPVMLKQNPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLLSHARELGVLVFENPAKRLIVVTPAGHGDVKRFWKRQKNSS
SIO_010081: GTF2H4
subclass of: SO_0000673
so part of: GTF2H4
location: join(1259048..1259068,1260674..1260816,1260950..1261054,1261909..1262040,1262594..1262690,1262829..1262917,1263002..1263113,1263529..1263597,1263695..1263778,1263856..1263988,1264096..1264226,1264994..1265041,1265183..1265261,1267422..1267594)
location: region:1259048-1267594:1
so has part: feature:1259048-1259068:1:exon
so has part: feature:1260674-1260816:1:exon
so has part: feature:1260950-1261054:1:exon
so has part: feature:1261909-1262040:1:exon
so has part: feature:1262594-1262690:1:exon
so has part: feature:1262829-1262917:1:exon
so has part: feature:1263002-1263113:1:exon
so has part: feature:1263529-1263597:1:exon
so has part: feature:1263695-1263778:1:exon
so has part: feature:1263856-1263988:1:exon
so has part: feature:1264096-1264226:1:exon
so has part: feature:1264994-1265041:1:exon
so has part: feature:1265183-1265261:1:exon
so has part: feature:1267422-1267594:1:exon

XP_038624540.1
type: Protein
SIO_000068: ncbiprotein

position:1259048:1
position: 1259048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267594:1
position: 1267594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259048-1259068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1260674-1260816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260950-1261054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261909-1262040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262594-1262690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262829-1262917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1263002-1263113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263529-1263597:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263695-1263778:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263856-1263988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1264096-1264226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1264994-1265041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265183-1265261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1267422-1267594:1:exon

VARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: VARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1269605..1287974
location: region:1269605-1287974:1
so has part: feature:1269605-1287974:1:exon
subclass of: SO_0000010

119947089
type: Gene
SIO_000068: ncbigene

position:1269605:1
position: 1269605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287974:1
position: 1287974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269605-1287974:1:exon

VARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VARS2
product: valyl-tRNA synthetase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768610.1
SIO_010081: VARS2
subclass of: SO_0000673
so part of: VARS2
location: join(1269605..1269700,1271088..1271333,1271444..1271525,1271683..1271783,1272773..1272894,1273283..1273349,1274473..1274570,1275262..1275343,1275457..1275576,1275674..1275785,1276018..1276106,1276221..1276311,1276518..1276645,1276966..1277069,1277547..1277628,1277969..1278045,1278129..1278198,1279380..1279485,1279574..1279644,1279746..1279871,1280924..1281028,1281121..1281189,1281628..1281706,1281804..1281931,1282047..1282199,1285553..1285747,1286712..1286823,1287170..1287345,1287430..1287570,1287785..1287974)
location: region:1269605-1287974:1
so has part: feature:1269605-1269700:1:exon
so has part: feature:1271088-1271333:1:exon
so has part: feature:1271444-1271525:1:exon
so has part: feature:1271683-1271783:1:exon
so has part: feature:1272773-1272894:1:exon
so has part: feature:1273283-1273349:1:exon
so has part: feature:1274473-1274570:1:exon
so has part: feature:1275262-1275343:1:exon
so has part: feature:1275457-1275576:1:exon
so has part: feature:1275674-1275785:1:exon
so has part: feature:1276018-1276106:1:exon
so has part: feature:1276221-1276311:1:exon
so has part: feature:1276518-1276645:1:exon
so has part: feature:1276966-1277069:1:exon
so has part: feature:1277547-1277628:1:exon
so has part: feature:1277969-1278045:1:exon
so has part: feature:1278129-1278198:1:exon
so has part: feature:1279380-1279485:1:exon
so has part: feature:1279574-1279644:1:exon
so has part: feature:1279746-1279871:1:exon
so has part: feature:1280924-1281028:1:exon
so has part: feature:1281121-1281189:1:exon
so has part: feature:1281628-1281706:1:exon
so has part: feature:1281804-1281931:1:exon
so has part: feature:1282047-1282199:1:exon
so has part: feature:1285553-1285747:1:exon
so has part: feature:1286712-1286823:1:exon
so has part: feature:1287170-1287345:1:exon
so has part: feature:1287430-1287570:1:exon
so has part: feature:1287785-1287974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269605-1269700:1:exon

position:1269700:1
position: 1269700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1271088-1271333:1:exon

position:1271088:1
position: 1271088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271333:1
position: 1271333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1271444-1271525:1:exon

position:1271444:1
position: 1271444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271525:1
position: 1271525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271683-1271783:1:exon

position:1271683:1
position: 1271683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271783:1
position: 1271783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1272773-1272894:1:exon

position:1272773:1
position: 1272773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272894:1
position: 1272894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1273283-1273349:1:exon

position:1273283:1
position: 1273283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273349:1
position: 1273349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1274473-1274570:1:exon

position:1274473:1
position: 1274473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274570:1
position: 1274570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1275262-1275343:1:exon

position:1275262:1
position: 1275262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275343:1
position: 1275343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1275457-1275576:1:exon

position:1275457:1
position: 1275457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275576:1
position: 1275576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1275674-1275785:1:exon

position:1275674:1
position: 1275674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275785:1
position: 1275785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1276018-1276106:1:exon

position:1276018:1
position: 1276018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276106:1
position: 1276106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1276221-1276311:1:exon

position:1276221:1
position: 1276221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276311:1
position: 1276311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1276518-1276645:1:exon

position:1276518:1
position: 1276518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276645:1
position: 1276645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1276966-1277069:1:exon

position:1276966:1
position: 1276966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277069:1
position: 1277069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1277547-1277628:1:exon

position:1277547:1
position: 1277547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277628:1
position: 1277628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1277969-1278045:1:exon

position:1277969:1
position: 1277969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278045:1
position: 1278045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1278129-1278198:1:exon

position:1278129:1
position: 1278129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278198:1
position: 1278198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1279380-1279485:1:exon

position:1279380:1
position: 1279380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279485:1
position: 1279485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1279574-1279644:1:exon

position:1279574:1
position: 1279574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279644:1
position: 1279644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1279746-1279871:1:exon

position:1279746:1
position: 1279746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279871:1
position: 1279871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1280924-1281028:1:exon

position:1280924:1
position: 1280924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281028:1
position: 1281028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1281121-1281189:1:exon

position:1281121:1
position: 1281121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281189:1
position: 1281189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1281628-1281706:1:exon

position:1281628:1
position: 1281628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281706:1
position: 1281706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1281804-1281931:1:exon

position:1281804:1
position: 1281804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281931:1
position: 1281931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1282047-1282199:1:exon

position:1282047:1
position: 1282047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282199:1
position: 1282199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1285553-1285747:1:exon

position:1285553:1
position: 1285553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285747:1
position: 1285747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1286712-1286823:1:exon

position:1286712:1
position: 1286712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286823:1
position: 1286823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1287170-1287345:1:exon

position:1287170:1
position: 1287170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287345:1
position: 1287345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1287430-1287570:1:exon

position:1287430:1
position: 1287430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287570:1
position: 1287570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1287785-1287974:1:exon

position:1287785:1
position: 1287785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VARS2
product: valyl-tRNA synthetase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768611.1
SIO_010081: VARS2
subclass of: SO_0000673
so part of: VARS2
location: join(1269605..1269700,1271088..1271333,1271447..1271525,1271683..1271783,1272773..1272894,1273283..1273349,1274473..1274570,1275262..1275343,1275457..1275576,1275674..1275785,1276018..1276106,1276221..1276311,1276518..1276645,1276966..1277069,1277547..1277628,1277969..1278045,1278129..1278198,1279380..1279485,1279574..1279644,1279746..1279871,1280924..1281028,1281121..1281189,1281628..1281706,1281804..1281931,1282047..1282199,1285553..1285747,1286712..1286823,1287170..1287345,1287430..1287570,1287785..1287974)
location: region:1269605-1287974:1
so has part: feature:1269605-1269700:1:exon
so has part: feature:1271088-1271333:1:exon
so has part: feature:1271447-1271525:1:exon
so has part: feature:1271683-1271783:1:exon
so has part: feature:1272773-1272894:1:exon
so has part: feature:1273283-1273349:1:exon
so has part: feature:1274473-1274570:1:exon
so has part: feature:1275262-1275343:1:exon
so has part: feature:1275457-1275576:1:exon
so has part: feature:1275674-1275785:1:exon
so has part: feature:1276018-1276106:1:exon
so has part: feature:1276221-1276311:1:exon
so has part: feature:1276518-1276645:1:exon
so has part: feature:1276966-1277069:1:exon
so has part: feature:1277547-1277628:1:exon
so has part: feature:1277969-1278045:1:exon
so has part: feature:1278129-1278198:1:exon
so has part: feature:1279380-1279485:1:exon
so has part: feature:1279574-1279644:1:exon
so has part: feature:1279746-1279871:1:exon
so has part: feature:1280924-1281028:1:exon
so has part: feature:1281121-1281189:1:exon
so has part: feature:1281628-1281706:1:exon
so has part: feature:1281804-1281931:1:exon
so has part: feature:1282047-1282199:1:exon
so has part: feature:1285553-1285747:1:exon
so has part: feature:1286712-1286823:1:exon
so has part: feature:1287170-1287345:1:exon
so has part: feature:1287430-1287570:1:exon
so has part: feature:1287785-1287974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269605-1269700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271088-1271333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271447-1271525:1:exon

position:1271447:1
position: 1271447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271683-1271783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1272773-1272894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273283-1273349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274473-1274570:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275262-1275343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275457-1275576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1275674-1275785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1276018-1276106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276221-1276311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1276518-1276645:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1276966-1277069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277547-1277628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1277969-1278045:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278129-1278198:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1279380-1279485:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279574-1279644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1279746-1279871:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1280924-1281028:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1281121-1281189:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1281628-1281706:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1281804-1281931:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1282047-1282199:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1285553-1285747:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1286712-1286823:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1287170-1287345:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1287430-1287570:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1287785-1287974:1:exon

VARS2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: VARS2
product: valyl-tRNA synthetase 2, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005456471.1
SIO_010081: VARS2
so part of: VARS2
location: join(1269605..1269700,1271088..1271333,1271444..1271525,1271683..1271783,1272773..1272894,1273283..1273349,1274473..1274570,1275262..1275343,1275457..1275576,1275674..1275785,1276018..1276106,1276221..1276311,1276518..1276645,1276966..1277069,1277547..1277628,1277969..1278045,1278129..1278198,1279380..1279485,1279574..1279644,1279746..1279871,1280924..1281028,1281121..1281189,1281628..1281706,1281804..1281931,1282047..1282199,1283161..1283271,1283405..1283508)
location: region:1269605-1283508:1
so has part: feature:1269605-1269700:1:exon
so has part: feature:1271088-1271333:1:exon
so has part: feature:1271444-1271525:1:exon
so has part: feature:1271683-1271783:1:exon
so has part: feature:1272773-1272894:1:exon
so has part: feature:1273283-1273349:1:exon
so has part: feature:1274473-1274570:1:exon
so has part: feature:1275262-1275343:1:exon
so has part: feature:1275457-1275576:1:exon
so has part: feature:1275674-1275785:1:exon
so has part: feature:1276018-1276106:1:exon
so has part: feature:1276221-1276311:1:exon
so has part: feature:1276518-1276645:1:exon
so has part: feature:1276966-1277069:1:exon
so has part: feature:1277547-1277628:1:exon
so has part: feature:1277969-1278045:1:exon
so has part: feature:1278129-1278198:1:exon
so has part: feature:1279380-1279485:1:exon
so has part: feature:1279574-1279644:1:exon
so has part: feature:1279746-1279871:1:exon
so has part: feature:1280924-1281028:1:exon
so has part: feature:1281121-1281189:1:exon
so has part: feature:1281628-1281706:1:exon
so has part: feature:1281804-1281931:1:exon
so has part: feature:1282047-1282199:1:exon
so has part: feature:1283161-1283271:1:exon
so has part: feature:1283405-1283508:1:exon

position:1283508:1
position: 1283508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269605-1269700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271088-1271333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271444-1271525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271683-1271783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1272773-1272894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273283-1273349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274473-1274570:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275262-1275343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275457-1275576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1275674-1275785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1276018-1276106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276221-1276311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1276518-1276645:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1276966-1277069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277547-1277628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1277969-1278045:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278129-1278198:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1279380-1279485:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279574-1279644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1279746-1279871:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1280924-1281028:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1281121-1281189:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1281628-1281706:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1281804-1281931:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1282047-1282199:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1283161-1283271:1:exon

position:1283161:1
position: 1283161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283271:1
position: 1283271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1283405-1283508:1:exon

position:1283405:1
position: 1283405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase, mitochondrial isoform X1
translation: MPPLPLGPLRPPLRGLRPPRGGTHPLSSQPDPHGAPALRRNREEKQKRLRERQAVLEAAVLTKNKQPSGPGKAWTPKEIVLYEVPTEPGQKKDVQVPLPPAYSPRYVEAAWYPWWVGEGFFKPEYQTQLPQASGATFSMCIPPPNVTGSLHLGHALTVAIQDAIVRWHRMRGDRVLWIPGSDHAGIATQAVVEKQLWKERGVRRHELSREDFLREVWRWKEEKGGEICDQLRALGASLDWDRECFTMDPGSSAAVTEAFVHLHRSGLLYRRRRLVSWSCALRSAISDIEVESRPLTGRTVLRPPGCPHPVPFGLLVSVAFPVDGDPGTEVIVGTTRPETLPGDVAVAVHPDDARYAALHGHHLLHPLTGQTLPLITDSSVQPQVGTGAVKVTPAHSYADEEMGARHGLTPLPVIEEDGTMSPQSGDWLQGLHRFEAREKIVSALKERGLFRGVRDHPMVLPLCSRSGDVVEYLLKSQWFVRCQEMGERAAQAVASGSLRLTPNFHQKKWHQWFAHRSDWCISRQLWWGHQIPAYRVVREQGGSEECWVVGRSEAEARDAAARLTGSPARELTLERDPDVLDTWFSSALFPFAALGWPRQTLDLARFYPLSLMETGSDLLLFWVARMVMLGTQLTGQLPFTEVLLHSMVRDGQGRKMSKSLGNVLDPRDVIQGAELKVLQDKLRDGNLDPKELDIAATGLKKDFPQGIPECGTDALRFTLCSHGAQGDDVNLAVSEVLSCRHFCNKIWNAVRFVLRALRDDFCPLPAEEVLPSSPMDAWVLSRLALTAADCQWGFLARDLPSVTRSLHDFWLHSFCDVYLESVKPELLRSPHAPGPPQTLFSCADVGLRLLAPLMPFLAEELWQRLPGRAAPSVTVAPYPSARSLEHWRQPQLEQNFSRVQEVVQALRALRATYQLGKARPQVLLRCLEPGERVVLEGFLEPLATLAQCGPVRLLPPEAMAPPGWAQAPLGCRSSAFVELQGLVDPHSLLQRLAARRQKLQRQLDALPAQTPAPRATLRDGETQKQQRVSSLRTELFRLDQAASHLRQLADGSPGPSLPRFET
SIO_010081: VARS2
subclass of: SO_0000673
so part of: VARS2
location: join(1271139..1271333,1271444..1271525,1271683..1271783,1272773..1272894,1273283..1273349,1274473..1274570,1275262..1275343,1275457..1275576,1275674..1275785,1276018..1276106,1276221..1276311,1276518..1276645,1276966..1277069,1277547..1277628,1277969..1278045,1278129..1278198,1279380..1279485,1279574..1279644,1279746..1279871,1280924..1281028,1281121..1281189,1281628..1281706,1281804..1281931,1282047..1282199,1285553..1285747,1286712..1286823,1287170..1287345,1287430..1287570,1287785..1287892)
location: region:1271139-1287892:1
so has part: feature:1271139-1271333:1:exon
so has part: feature:1271444-1271525:1:exon
so has part: feature:1271683-1271783:1:exon
so has part: feature:1272773-1272894:1:exon
so has part: feature:1273283-1273349:1:exon
so has part: feature:1274473-1274570:1:exon
so has part: feature:1275262-1275343:1:exon
so has part: feature:1275457-1275576:1:exon
so has part: feature:1275674-1275785:1:exon
so has part: feature:1276018-1276106:1:exon
so has part: feature:1276221-1276311:1:exon
so has part: feature:1276518-1276645:1:exon
so has part: feature:1276966-1277069:1:exon
so has part: feature:1277547-1277628:1:exon
so has part: feature:1277969-1278045:1:exon
so has part: feature:1278129-1278198:1:exon
so has part: feature:1279380-1279485:1:exon
so has part: feature:1279574-1279644:1:exon
so has part: feature:1279746-1279871:1:exon
so has part: feature:1280924-1281028:1:exon
so has part: feature:1281121-1281189:1:exon
so has part: feature:1281628-1281706:1:exon
so has part: feature:1281804-1281931:1:exon
so has part: feature:1282047-1282199:1:exon
so has part: feature:1285553-1285747:1:exon
so has part: feature:1286712-1286823:1:exon
so has part: feature:1287170-1287345:1:exon
so has part: feature:1287430-1287570:1:exon
so has part: feature:1287785-1287892:1:exon

XP_038624538.1
type: Protein
SIO_000068: ncbiprotein

position:1271139:1
position: 1271139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287892:1
position: 1287892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271139-1271333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271444-1271525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271683-1271783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272773-1272894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273283-1273349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1274473-1274570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275262-1275343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275457-1275576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275674-1275785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1276018-1276106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1276221-1276311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276518-1276645:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1276966-1277069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1277547-1277628:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277969-1278045:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1278129-1278198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1279380-1279485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1279574-1279644:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279746-1279871:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1280924-1281028:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1281121-1281189:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1281628-1281706:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1281804-1281931:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1282047-1282199:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1285553-1285747:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1286712-1286823:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1287170-1287345:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1287430-1287570:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1287785-1287892:1:exon

VARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase, mitochondrial isoform X2
translation: MPPLPLGPLRPPLRGLRPPRGGTHPLSSQPDPHGAPALRRNREEKQKRLRERQAVLEAAVLTKNKPSGPGKAWTPKEIVLYEVPTEPGQKKDVQVPLPPAYSPRYVEAAWYPWWVGEGFFKPEYQTQLPQASGATFSMCIPPPNVTGSLHLGHALTVAIQDAIVRWHRMRGDRVLWIPGSDHAGIATQAVVEKQLWKERGVRRHELSREDFLREVWRWKEEKGGEICDQLRALGASLDWDRECFTMDPGSSAAVTEAFVHLHRSGLLYRRRRLVSWSCALRSAISDIEVESRPLTGRTVLRPPGCPHPVPFGLLVSVAFPVDGDPGTEVIVGTTRPETLPGDVAVAVHPDDARYAALHGHHLLHPLTGQTLPLITDSSVQPQVGTGAVKVTPAHSYADEEMGARHGLTPLPVIEEDGTMSPQSGDWLQGLHRFEAREKIVSALKERGLFRGVRDHPMVLPLCSRSGDVVEYLLKSQWFVRCQEMGERAAQAVASGSLRLTPNFHQKKWHQWFAHRSDWCISRQLWWGHQIPAYRVVREQGGSEECWVVGRSEAEARDAAARLTGSPARELTLERDPDVLDTWFSSALFPFAALGWPRQTLDLARFYPLSLMETGSDLLLFWVARMVMLGTQLTGQLPFTEVLLHSMVRDGQGRKMSKSLGNVLDPRDVIQGAELKVLQDKLRDGNLDPKELDIAATGLKKDFPQGIPECGTDALRFTLCSHGAQGDDVNLAVSEVLSCRHFCNKIWNAVRFVLRALRDDFCPLPAEEVLPSSPMDAWVLSRLALTAADCQWGFLARDLPSVTRSLHDFWLHSFCDVYLESVKPELLRSPHAPGPPQTLFSCADVGLRLLAPLMPFLAEELWQRLPGRAAPSVTVAPYPSARSLEHWRQPQLEQNFSRVQEVVQALRALRATYQLGKARPQVLLRCLEPGERVVLEGFLEPLATLAQCGPVRLLPPEAMAPPGWAQAPLGCRSSAFVELQGLVDPHSLLQRLAARRQKLQRQLDALPAQTPAPRATLRDGETQKQQRVSSLRTELFRLDQAASHLRQLADGSPGPSLPRFET
SIO_010081: VARS2
subclass of: SO_0000673
so part of: VARS2
location: join(1271139..1271333,1271447..1271525,1271683..1271783,1272773..1272894,1273283..1273349,1274473..1274570,1275262..1275343,1275457..1275576,1275674..1275785,1276018..1276106,1276221..1276311,1276518..1276645,1276966..1277069,1277547..1277628,1277969..1278045,1278129..1278198,1279380..1279485,1279574..1279644,1279746..1279871,1280924..1281028,1281121..1281189,1281628..1281706,1281804..1281931,1282047..1282199,1285553..1285747,1286712..1286823,1287170..1287345,1287430..1287570,1287785..1287892)
location: region:1271139-1287892:1
so has part: feature:1271139-1271333:1:exon
so has part: feature:1271447-1271525:1:exon
so has part: feature:1271683-1271783:1:exon
so has part: feature:1272773-1272894:1:exon
so has part: feature:1273283-1273349:1:exon
so has part: feature:1274473-1274570:1:exon
so has part: feature:1275262-1275343:1:exon
so has part: feature:1275457-1275576:1:exon
so has part: feature:1275674-1275785:1:exon
so has part: feature:1276018-1276106:1:exon
so has part: feature:1276221-1276311:1:exon
so has part: feature:1276518-1276645:1:exon
so has part: feature:1276966-1277069:1:exon
so has part: feature:1277547-1277628:1:exon
so has part: feature:1277969-1278045:1:exon
so has part: feature:1278129-1278198:1:exon
so has part: feature:1279380-1279485:1:exon
so has part: feature:1279574-1279644:1:exon
so has part: feature:1279746-1279871:1:exon
so has part: feature:1280924-1281028:1:exon
so has part: feature:1281121-1281189:1:exon
so has part: feature:1281628-1281706:1:exon
so has part: feature:1281804-1281931:1:exon
so has part: feature:1282047-1282199:1:exon
so has part: feature:1285553-1285747:1:exon
so has part: feature:1286712-1286823:1:exon
so has part: feature:1287170-1287345:1:exon
so has part: feature:1287430-1287570:1:exon
so has part: feature:1287785-1287892:1:exon

XP_038624539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1271139-1271333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271447-1271525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271683-1271783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272773-1272894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273283-1273349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1274473-1274570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275262-1275343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275457-1275576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275674-1275785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1276018-1276106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1276221-1276311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276518-1276645:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1276966-1277069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1277547-1277628:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277969-1278045:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1278129-1278198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1279380-1279485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1279574-1279644:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279746-1279871:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1280924-1281028:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1281121-1281189:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1281628-1281706:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1281804-1281931:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1282047-1282199:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1285553-1285747:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1286712-1286823:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1287170-1287345:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1287430-1287570:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1287785-1287892:1:exon

CDSN
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CDSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1339160..1343151)
location: region:1339160-1343151:-1
so has part: feature:1339160-1343151:-1:exon
subclass of: SO_0000010

119947329
type: Gene
SIO_000068: ncbigene

position:1339160:-1
position: 1339160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343151:-1
position: 1343151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339160-1343151:-1:exon

CDSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CDSN
product: corneodesmosin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768971.1
SIO_010081: CDSN
subclass of: SO_0000673
so part of: CDSN
location: complement(join(1339160..1340535,1343067..1343151))
location: region:1339160-1343151:-1
so has part: feature:1343067-1343151:-1:exon
so has part: feature:1339160-1340535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1343067-1343151:-1:exon

position:1343067:-1
position: 1343067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339160-1340535:-1:exon

position:1340535:-1
position: 1340535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CDSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: corneodesmosin
translation: MGRARGPRGGLVGGHTVLLLLVIDLLLPGILCKSLGSDLDPCKDPSRISSPALAALCTPRTGGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSGKGWSSPSEISWSSQSGTGTDQSGPGWSLQSGGLSSSNAGGSGSSQTVWLSSSSSSSSSSSSSSSSGAGSQGVAQFGPCSSGSGASSVPCKTPSSYLPESHRVAGDQRPVVVVETHAAPCLTGRPCPPITSLEPGPGRVGYQVVGGSARDYLVPGMTYDKGKIYPVGYFTKERGPKGAAGRPVFAAGAPVPEGVYFSSNAHSSQYSAGAPPDPAGSGLFSRTGGALISFRTPGCGDGARGGPCAPSSSSSSSSASVALQPCGARGSRGPGVGCLPAGSRGSPGGPVIVARPCVGGSGLGGSPGRPCGSSPAGPSGGPDGSPLPDPAAGAKPCGSGARGSGGLPCRSIRDIWAQVKPLGPQLAEPAAFLPQGDPLRDP
SIO_010081: CDSN
subclass of: SO_0000673
so part of: CDSN
location: complement(join(1339160..1340535,1343067..1343151))
location: region:1339160-1343151:-1
so has part: feature:1343067-1343151:-1:exon
so has part: feature:1339160-1340535:-1:exon

XP_038624899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1343067-1343151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339160-1340535:-1:exon

CCHCR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CCHCR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1358426..1372767)
location: region:1358426-1372767:-1
so has part: feature:1358426-1372767:-1:exon
subclass of: SO_0000010

119947177
type: Gene
SIO_000068: ncbigene

position:1358426:-1
position: 1358426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372767:-1
position: 1372767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358426-1372767:-1:exon

CCHCR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CCHCR1
product: coiled-coil alpha-helical rod protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768743.1
SIO_010081: CCHCR1
subclass of: SO_0000673
so part of: CCHCR1
location: complement(join(1358426..1358503,1360590..1360743,1361239..1361371,1361594..1361745,1361848..1361949,1362300..1362488,1363335..1363465,1363601..1363649,1363810..1363922,1364592..1364698,1365518..1365628,1365866..1366015,1366298..1366408,1366644..1366779,1366887..1367050,1368933..1369203,1370016..1370199,1370626..1370693,1372734..1372767))
location: region:1358426-1372767:-1
so has part: feature:1372734-1372767:-1:exon
so has part: feature:1370626-1370693:-1:exon
so has part: feature:1370016-1370199:-1:exon
so has part: feature:1368933-1369203:-1:exon
so has part: feature:1366887-1367050:-1:exon
so has part: feature:1366644-1366779:-1:exon
so has part: feature:1366298-1366408:-1:exon
so has part: feature:1365866-1366015:-1:exon
so has part: feature:1365518-1365628:-1:exon
so has part: feature:1364592-1364698:-1:exon
so has part: feature:1363810-1363922:-1:exon
so has part: feature:1363601-1363649:-1:exon
so has part: feature:1363335-1363465:-1:exon
so has part: feature:1362300-1362488:-1:exon
so has part: feature:1361848-1361949:-1:exon
so has part: feature:1361594-1361745:-1:exon
so has part: feature:1361239-1361371:-1:exon
so has part: feature:1360590-1360743:-1:exon
so has part: feature:1358426-1358503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1372734-1372767:-1:exon

position:1372734:-1
position: 1372734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1370626-1370693:-1:exon

position:1370626:-1
position: 1370626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370693:-1
position: 1370693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1370016-1370199:-1:exon

position:1370016:-1
position: 1370016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370199:-1
position: 1370199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1368933-1369203:-1:exon

position:1368933:-1
position: 1368933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369203:-1
position: 1369203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1366887-1367050:-1:exon

position:1366887:-1
position: 1366887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367050:-1
position: 1367050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1366644-1366779:-1:exon

position:1366644:-1
position: 1366644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366779:-1
position: 1366779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1366298-1366408:-1:exon

position:1366298:-1
position: 1366298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366408:-1
position: 1366408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1365866-1366015:-1:exon

position:1365866:-1
position: 1365866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366015:-1
position: 1366015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1365518-1365628:-1:exon

position:1365518:-1
position: 1365518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365628:-1
position: 1365628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1364592-1364698:-1:exon

position:1364592:-1
position: 1364592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364698:-1
position: 1364698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1363810-1363922:-1:exon

position:1363810:-1
position: 1363810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363922:-1
position: 1363922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1363601-1363649:-1:exon

position:1363601:-1
position: 1363601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363649:-1
position: 1363649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1363335-1363465:-1:exon

position:1363335:-1
position: 1363335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363465:-1
position: 1363465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1362300-1362488:-1:exon

position:1362300:-1
position: 1362300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362488:-1
position: 1362488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1361848-1361949:-1:exon

position:1361848:-1
position: 1361848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361949:-1
position: 1361949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1361594-1361745:-1:exon

position:1361594:-1
position: 1361594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361745:-1
position: 1361745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1361239-1361371:-1:exon

position:1361239:-1
position: 1361239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361371:-1
position: 1361371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1360590-1360743:-1:exon

position:1360590:-1
position: 1360590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360743:-1
position: 1360743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1358426-1358503:-1:exon

position:1358503:-1
position: 1358503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCHCR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CCHCR1
product: coiled-coil alpha-helical rod protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768742.1
SIO_010081: CCHCR1
subclass of: SO_0000673
so part of: CCHCR1
location: complement(join(1360508..1360743,1361239..1361371,1361594..1361745,1361848..1361949,1362300..1362488,1363335..1363465,1363601..1363649,1363810..1363922,1364592..1364698,1365518..1365628,1365866..1366015,1366298..1366408,1366644..1366779,1366887..1367050,1368933..1369203,1370016..1370199,1370626..1370693,1372734..1372767))
location: region:1360508-1372767:-1
so has part: feature:1372734-1372767:-1:exon
so has part: feature:1370626-1370693:-1:exon
so has part: feature:1370016-1370199:-1:exon
so has part: feature:1368933-1369203:-1:exon
so has part: feature:1366887-1367050:-1:exon
so has part: feature:1366644-1366779:-1:exon
so has part: feature:1366298-1366408:-1:exon
so has part: feature:1365866-1366015:-1:exon
so has part: feature:1365518-1365628:-1:exon
so has part: feature:1364592-1364698:-1:exon
so has part: feature:1363810-1363922:-1:exon
so has part: feature:1363601-1363649:-1:exon
so has part: feature:1363335-1363465:-1:exon
so has part: feature:1362300-1362488:-1:exon
so has part: feature:1361848-1361949:-1:exon
so has part: feature:1361594-1361745:-1:exon
so has part: feature:1361239-1361371:-1:exon
so has part: feature:1360508-1360743:-1:exon

position:1360508:-1
position: 1360508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372734-1372767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1370626-1370693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370016-1370199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368933-1369203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366887-1367050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366644-1366779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1366298-1366408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365866-1366015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365518-1365628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1364592-1364698:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1363810-1363922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1363601-1363649:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363335-1363465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1362300-1362488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1361848-1361949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1361594-1361745:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1361239-1361371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1360508-1360743:-1:exon

CCHCR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CCHCR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil alpha-helical rod protein 1
translation: MASRRWNLDPPAAFAMPQAAGSRELVPPSHFQARPAAAPSWALAGAQLEVLELRRENQQLRAAMLGWSGGRDASEEPGRGARFRDQERPQGLSQQAQLVPPQQQELPRLEAEARQGAKPEVQAEELEALRQAGRAEAEELRASLARAEEARLRLEEGGRQELEAARRQHEEEVAHLTQAHLEALSTLRGQVQELHKTVQDLEARGGQEAAALAAAQAEADTLQEQLKKSREELEARDSLVRQLRKQVAEQGMAQTRCQAWEQERGELQQAVKRLQEERVALSSTSELLQVRVQSLTDILTLQERELAQKVPNVNILEPETDRKARALLSRWREKVFSLMVQLRAQELSHTKQTCQLQTEVAELKKEVASQRQQEALLLHSLKGKEAEVQMEQINSKVLQGELSRSQDSRQQLQDQVQAAEGQMQLLSESVRSSQQGLLARMAKVEVALAQLPGLSTRLSYAVRQVRILQGLVARKVALAQIRQEESVPAEAEALNSELQQLREERSRQDAELRFSARLLQQEVARARDQGQAERQRLAEASQSLERELRETREALGKTETRLEAALAGQRDSQDQVDSLRHELGQQQEAYGKVLQEKVSEVEAQLREPLAALEKELSAARREHSKAVVSLRQAQRQAARDRERNLELRRLHEEARQEEEARTSRRLQQLERDKCLLLNTLRQEGLLSHYKQQRLTFLPRLLPASGDPTDPSVGPRPRTPTKESLVAVLDGLQSLSTAITQEEEEEEVEGERGDSKASG
SIO_010081: CCHCR1
subclass of: SO_0000673
so part of: CCHCR1
location: complement(join(1360631..1360743,1361239..1361371,1361594..1361745,1361848..1361949,1362300..1362488,1363335..1363465,1363601..1363649,1363810..1363922,1364592..1364698,1365518..1365628,1365866..1366015,1366298..1366408,1366644..1366779,1366887..1367050,1368933..1369203,1370016..1370199,1370626..1370686))
location: region:1360631-1370686:-1
so has part: feature:1370626-1370686:-1:exon
so has part: feature:1370016-1370199:-1:exon
so has part: feature:1368933-1369203:-1:exon
so has part: feature:1366887-1367050:-1:exon
so has part: feature:1366644-1366779:-1:exon
so has part: feature:1366298-1366408:-1:exon
so has part: feature:1365866-1366015:-1:exon
so has part: feature:1365518-1365628:-1:exon
so has part: feature:1364592-1364698:-1:exon
so has part: feature:1363810-1363922:-1:exon
so has part: feature:1363601-1363649:-1:exon
so has part: feature:1363335-1363465:-1:exon
so has part: feature:1362300-1362488:-1:exon
so has part: feature:1361848-1361949:-1:exon
so has part: feature:1361594-1361745:-1:exon
so has part: feature:1361239-1361371:-1:exon
so has part: feature:1360631-1360743:-1:exon

XP_038624670.1
type: Protein
SIO_000068: ncbiprotein

position:1360631:-1
position: 1360631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370686:-1
position: 1370686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370626-1370686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1370016-1370199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368933-1369203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366887-1367050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366644-1366779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366298-1366408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365866-1366015:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365518-1365628:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364592-1364698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1363810-1363922:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1363601-1363649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1363335-1363465:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362300-1362488:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1361848-1361949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1361594-1361745:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1361239-1361371:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1360631-1360743:-1:exon

CCHCR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CCHCR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil alpha-helical rod protein 1
translation: MASRRWNLDPPAAFAMPQAAGSRELVPPSHFQARPAAAPSWALAGAQLEVLELRRENQQLRAAMLGWSGGRDASEEPGRGARFRDQERPQGLSQQAQLVPPQQQELPRLEAEARQGAKPEVQAEELEALRQAGRAEAEELRASLARAEEARLRLEEGGRQELEAARRQHEEEVAHLTQAHLEALSTLRGQVQELHKTVQDLEARGGQEAAALAAAQAEADTLQEQLKKSREELEARDSLVRQLRKQVAEQGMAQTRCQAWEQERGELQQAVKRLQEERVALSSTSELLQVRVQSLTDILTLQERELAQKVPNVNILEPETDRKARALLSRWREKVFSLMVQLRAQELSHTKQTCQLQTEVAELKKEVASQRQQEALLLHSLKGKEAEVQMEQINSKVLQGELSRSQDSRQQLQDQVQAAEGQMQLLSESVRSSQQGLLARMAKVEVALAQLPGLSTRLSYAVRQVRILQGLVARKVALAQIRQEESVPAEAEALNSELQQLREERSRQDAELRFSARLLQQEVARARDQGQAERQRLAEASQSLERELRETREALGKTETRLEAALAGQRDSQDQVDSLRHELGQQQEAYGKVLQEKVSEVEAQLREPLAALEKELSAARREHSKAVVSLRQAQRQAARDRERNLELRRLHEEARQEEEARTSRRLQQLERDKCLLLNTLRQEGLLSHYKQQRLTFLPRLLPASGDPTDPSVGPRPRTPTKESLVAVLDGLQSLSTAITQEEEEEEVEGERGDSKASG
SIO_010081: CCHCR1
subclass of: SO_0000673
so part of: CCHCR1
location: complement(join(1360631..1360743,1361239..1361371,1361594..1361745,1361848..1361949,1362300..1362488,1363335..1363465,1363601..1363649,1363810..1363922,1364592..1364698,1365518..1365628,1365866..1366015,1366298..1366408,1366644..1366779,1366887..1367050,1368933..1369203,1370016..1370199,1370626..1370686))
location: region:1360631-1370686:-1
so has part: feature:1370626-1370686:-1:exon
so has part: feature:1370016-1370199:-1:exon
so has part: feature:1368933-1369203:-1:exon
so has part: feature:1366887-1367050:-1:exon
so has part: feature:1366644-1366779:-1:exon
so has part: feature:1366298-1366408:-1:exon
so has part: feature:1365866-1366015:-1:exon
so has part: feature:1365518-1365628:-1:exon
so has part: feature:1364592-1364698:-1:exon
so has part: feature:1363810-1363922:-1:exon
so has part: feature:1363601-1363649:-1:exon
so has part: feature:1363335-1363465:-1:exon
so has part: feature:1362300-1362488:-1:exon
so has part: feature:1361848-1361949:-1:exon
so has part: feature:1361594-1361745:-1:exon
so has part: feature:1361239-1361371:-1:exon
so has part: feature:1360631-1360743:-1:exon

XP_038624671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1370626-1370686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1370016-1370199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368933-1369203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366887-1367050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366644-1366779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366298-1366408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365866-1366015:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365518-1365628:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364592-1364698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1363810-1363922:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1363601-1363649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1363335-1363465:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362300-1362488:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1361848-1361949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1361594-1361745:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1361239-1361371:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1360631-1360743:-1:exon

TCF19
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TCF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1374094..1377939
location: region:1374094-1377939:1
so has part: feature:1374094-1377939:1:exon
subclass of: SO_0000010

119947233
type: Gene
SIO_000068: ncbigene

position:1374094:1
position: 1374094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377939:1
position: 1377939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374094-1377939:1:exon

TCF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TCF19
product: transcription factor 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038768838.1
SIO_010081: TCF19
subclass of: SO_0000673
so part of: TCF19
location: join(1374094..1374337,1375510..1376059,1377285..1377939)
location: region:1374094-1377939:1
so has part: feature:1374094-1374337:1:exon
so has part: feature:1375510-1376059:1:exon
so has part: feature:1377285-1377939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1374094-1374337:1:exon

position:1374337:1
position: 1374337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1375510-1376059:1:exon

position:1375510:1
position: 1375510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376059:1
position: 1376059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1377285-1377939:1:exon

position:1377285:1
position: 1377285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TCF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 19
translation: MLPCFQLLRMGGGGGGDLYTFRPAGTGCTYRLGRRADLCDVPLRPEREPGLVSRVHAELHAERDAQRDGDWRVSLLDCSSHGTSVNNVRLPRGRRVELDDGDLLTFGSEGGPGTEPPEFCFMFQRVRVRPQDFAAITVPRATGVGGGFRPMLPSRGAPQRPLSAPSPSPKATLILSSIGSLSKLRPQPLTFSRGGGPVEAPAPAPAVGGQGAPDIPPAPRNRRKSAHRVLAELEDEGVPGESPPAARPGPRKKPRMEKTPVTPSGKRRGRPRKYPIAPVPGGDPCAAPRCRLPQDETVTWVQCDHCDAWFHVACAGCSYRAAQEADFRCPTCRA
SIO_010081: TCF19
subclass of: SO_0000673
so part of: TCF19
location: join(1374094..1374337,1375510..1376059,1377285..1377495)
location: region:1374094-1377495:1
so has part: feature:1374094-1374337:1:exon
so has part: feature:1375510-1376059:1:exon
so has part: feature:1377285-1377495:1:exon

XP_038624766.1
type: Protein
SIO_000068: ncbiprotein

position:1377495:1
position: 1377495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374094-1374337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375510-1376059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1377285-1377495:1:exon

POU5F1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: POU5F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378594..1384336)
location: region:1378594-1384336:-1
so has part: feature:1378594-1384336:-1:exon
subclass of: SO_0000010

119947334
type: Gene
SIO_000068: ncbigene

position:1378594:-1
position: 1378594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384336:-1
position: 1384336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378594-1384336:-1:exon

POU5F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: POU5F1
product: POU class 5 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768977.1
SIO_010081: POU5F1
subclass of: SO_0000673
so part of: POU5F1
location: complement(join(1378594..1378857,1378966..1379127,1380405..1380535,1380639..1380779,1383952..1384336))
location: region:1378594-1384336:-1
so has part: feature:1383952-1384336:-1:exon
so has part: feature:1380639-1380779:-1:exon
so has part: feature:1380405-1380535:-1:exon
so has part: feature:1378966-1379127:-1:exon
so has part: feature:1378594-1378857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383952-1384336:-1:exon

position:1383952:-1
position: 1383952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1380639-1380779:-1:exon

position:1380639:-1
position: 1380639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380779:-1
position: 1380779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1380405-1380535:-1:exon

position:1380405:-1
position: 1380405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380535:-1
position: 1380535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1378966-1379127:-1:exon

position:1378966:-1
position: 1378966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379127:-1
position: 1379127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1378594-1378857:-1:exon

position:1378857:-1
position: 1378857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU5F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: POU5F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 5, transcription factor 1
translation: MAGHLGPDFAFSPPPGGGEPWGDPRGWYGYPAPPGAAGAGAGAGAGPGGEPWGGPFLPPPAGPLYEGGGWGGCFVPQLGVGLAPPPPDPSGPDGEGGGAAGTPPPGRLPRTGGLRPRPEARAGRERRRASPPRPCPQQETPSREELEQFAKELKRKRITLGYTQADVGVTLGALFGKVFSQTTICRFEAQQLSFKNMCKLRPLLQRWLEAADDNDRLQEMCNAETVLQQARKRKRTSIENKVRGNLETMFLQCPKPNLQQISSIAEELGLEKDVVRVWFCNRRQKGKRGSGCSSREDFETAGPFPGGGPVHLPLPPGPSLGPPGYGGPPFATLYSPAPFHDGDAFAPVPIAPLGPPTHSS
SIO_010081: POU5F1
subclass of: SO_0000673
so part of: POU5F1
location: complement(join(1378594..1378857,1378966..1379127,1380405..1380535,1380639..1380779,1383952..1384336))
location: region:1378594-1384336:-1
so has part: feature:1383952-1384336:-1:exon
so has part: feature:1380639-1380779:-1:exon
so has part: feature:1380405-1380535:-1:exon
so has part: feature:1378966-1379127:-1:exon
so has part: feature:1378594-1378857:-1:exon

XP_038624905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383952-1384336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1380639-1380779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1380405-1380535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378966-1379127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378594-1378857:-1:exon

LOC119946754
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119946754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1396293..1397957)
location: region:1396293-1397957:-1
so has part: feature:1396293-1397957:-1:exon
subclass of: SO_0000010

119946754
type: Gene
SIO_000068: ncbigene

position:1396293:-1
position: 1396293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397957:-1
position: 1397957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396293-1397957:-1:exon

LOC119946754
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119946754
product: hereditary hemochromatosis protein homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_038768202.1
SIO_010081: LOC119946754
subclass of: SO_0000673
so part of: LOC119946754
location: complement(join(1396293..1396429,1397690..1397957))
location: region:1396293-1397957:-1
so has part: feature:1397690-1397957:-1:exon
so has part: feature:1396293-1396429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397690-1397957:-1:exon

position:1397690:-1
position: 1397690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1396293-1396429:-1:exon

position:1396429:-1
position: 1396429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119946754
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119946754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hereditary hemochromatosis protein homolog
translation: MLQASLGCEVQEDGGPSAFWRFGYDGKDFLTFEPKMLSWTAADPGAWGLKEKWEADLKRGDRDRAFLEGTCTHMLRKYLASGGKTLERAVTILKCRALGFSPQNISLNWLRDGEKLPQRTLEPKAGLPSGDRTY
SIO_010081: LOC119946754
subclass of: SO_0000673
so part of: LOC119946754
location: complement(join(1396293..1396429,1397690..1397957))
location: region:1396293-1397957:-1
so has part: feature:1397690-1397957:-1:exon
so has part: feature:1396293-1396429:-1:exon

XP_038624130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1397690-1397957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1396293-1396429:-1:exon

MCCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MCCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1409115..1410133
location: region:1409115-1410133:1
so has part: feature:1409115-1410133:1:exon
subclass of: SO_0000010

119947067
type: Gene
SIO_000068: ncbigene

position:1409115:1
position: 1409115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410133:1
position: 1410133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409115-1410133:1:exon

MCCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MCCD1
product: mitochondrial coiled-coil domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768573.1
SIO_010081: MCCD1
subclass of: SO_0000673
so part of: MCCD1
location: join(1409115..1409350,1409572..1410133)
location: region:1409115-1410133:1
so has part: feature:1409115-1409350:1:exon
so has part: feature:1409572-1410133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1409115-1409350:1:exon

position:1409350:1
position: 1409350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409572-1410133:1:exon

position:1409572:1
position: 1409572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MCCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial coiled-coil domain protein 1
translation: MGPPLSWLSRCSRLLPLLRAPPAMGRGFSEDNRPPPEDTHAGETHSTKCRQRQEERQCGFPGGRGAELAQVEQLLEQQLELYQALLEGQDGAWEAQALVLKVQKLKEQMRRHREGPGERDTI
SIO_010081: MCCD1
subclass of: SO_0000673
so part of: MCCD1
location: join(1409207..1409350,1409572..1409796)
location: region:1409207-1409796:1
so has part: feature:1409207-1409350:1:exon
so has part: feature:1409572-1409796:1:exon

XP_038624501.1
type: Protein
SIO_000068: ncbiprotein

position:1409207:1
position: 1409207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409796:1
position: 1409796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409207-1409350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409572-1409796:1:exon

DDX39B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DDX39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1410126..1418158)
location: region:1410126-1418158:-1
so has part: feature:1410126-1418158:-1:exon
subclass of: SO_0000010

119947066
type: Gene
SIO_000068: ncbigene

position:1410126:-1
position: 1410126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418158:-1
position: 1418158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410126-1418158:-1:exon

DDX39B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDX39B
product: DExD-box helicase 39B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768572.1
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410126..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416218,1418091..1418158))
location: region:1410126-1418158:-1
so has part: feature:1418091-1418158:-1:exon
so has part: feature:1415916-1416218:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410126-1410376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1418091-1418158:-1:exon

position:1418091:-1
position: 1418091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1415916-1416218:-1:exon

position:1415916:-1
position: 1415916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416218:-1
position: 1416218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1415697-1415824:-1:exon

position:1415697:-1
position: 1415697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415824:-1
position: 1415824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415378-1415470:-1:exon

position:1415378:-1
position: 1415378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415470:-1
position: 1415470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1414279-1414462:-1:exon

position:1414279:-1
position: 1414279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414462:-1
position: 1414462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1414046-1414164:-1:exon

position:1414046:-1
position: 1414046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414164:-1
position: 1414164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1411272-1411403:-1:exon

position:1411272:-1
position: 1411272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411403:-1
position: 1411403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1411068-1411177:-1:exon

position:1411068:-1
position: 1411068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411177:-1
position: 1411177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1410829-1410973:-1:exon

position:1410829:-1
position: 1410829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410973:-1
position: 1410973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1410549-1410696:-1:exon

position:1410549:-1
position: 1410549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410696:-1
position: 1410696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1410126-1410376:-1:exon

position:1410376:-1
position: 1410376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX39B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDX39B
product: DExD-box helicase 39B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038768570.1
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410126..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416218,1416866..1416909,1418091..1418106))
location: region:1410126-1418106:-1
so has part: feature:1418091-1418106:-1:exon
so has part: feature:1416866-1416909:-1:exon
so has part: feature:1415916-1416218:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410126-1410376:-1:exon

position:1418106:-1
position: 1418106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418091-1418106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416866-1416909:-1:exon

position:1416866:-1
position: 1416866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416909:-1
position: 1416909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1415916-1416218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1410126-1410376:-1:exon

DDX39B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDX39B
product: DExD-box helicase 39B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768568.1
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410126..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416218,1417916..1418014))
location: region:1410126-1418014:-1
so has part: feature:1417916-1418014:-1:exon
so has part: feature:1415916-1416218:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410126-1410376:-1:exon

position:1418014:-1
position: 1418014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417916-1418014:-1:exon

position:1417916:-1
position: 1417916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1415916-1416218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1410126-1410376:-1:exon

DDX39B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDX39B
product: DExD-box helicase 39B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768569.1
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410126..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416218,1416866..1416909,1417916..1418005))
location: region:1410126-1418005:-1
so has part: feature:1417916-1418005:-1:exon
so has part: feature:1416866-1416909:-1:exon
so has part: feature:1415916-1416218:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410126-1410376:-1:exon

position:1418005:-1
position: 1418005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417916-1418005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416866-1416909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415916-1416218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1410126-1410376:-1:exon

DDX39B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDX39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spliceosome RNA helicase DDX39B
translation: MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410360..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416126))
location: region:1410360-1416126:-1
so has part: feature:1415916-1416126:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410360-1410376:-1:exon

XP_038624496.1
type: Protein
SIO_000068: ncbiprotein

position:1410360:-1
position: 1410360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416126:-1
position: 1416126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415916-1416126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410360-1410376:-1:exon

DDX39B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDX39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spliceosome RNA helicase DDX39B
translation: MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410360..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416126))
location: region:1410360-1416126:-1
so has part: feature:1415916-1416126:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410360-1410376:-1:exon

XP_038624497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1415916-1416126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410360-1410376:-1:exon

DDX39B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDX39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spliceosome RNA helicase DDX39B
translation: MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410360..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416126))
location: region:1410360-1416126:-1
so has part: feature:1415916-1416126:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410360-1410376:-1:exon

XP_038624498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1415916-1416126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410360-1410376:-1:exon

DDX39B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDX39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spliceosome RNA helicase DDX39B
translation: MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
SIO_010081: DDX39B
subclass of: SO_0000673
so part of: DDX39B
location: complement(join(1410360..1410376,1410549..1410696,1410829..1410973,1411068..1411177,1411272..1411403,1414046..1414164,1414279..1414462,1415378..1415470,1415697..1415824,1415916..1416126))
location: region:1410360-1416126:-1
so has part: feature:1415916-1416126:-1:exon
so has part: feature:1415697-1415824:-1:exon
so has part: feature:1415378-1415470:-1:exon
so has part: feature:1414279-1414462:-1:exon
so has part: feature:1414046-1414164:-1:exon
so has part: feature:1411272-1411403:-1:exon
so has part: feature:1411068-1411177:-1:exon
so has part: feature:1410829-1410973:-1:exon
so has part: feature:1410549-1410696:-1:exon
so has part: feature:1410360-1410376:-1:exon

XP_038624500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1415916-1416126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415697-1415824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415378-1415470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414279-1414462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414046-1414164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411272-1411403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411068-1411177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410829-1410973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410549-1410696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1410360-1410376:-1:exon

LOC119947415
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947415
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1415563..1415639)
location: region:1415563-1415639:-1
so has part: feature:1415563-1415639:-1:exon
subclass of: SO_0000578

119947415
type: Gene
SIO_000068: ncbigene

position:1415563:-1
position: 1415563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415639:-1
position: 1415639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415563-1415639:-1:exon

LOC119947415
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119947415
product: small nucleolar RNA SNORD83
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00137
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456489.1
SIO_010081: LOC119947415
subclass of: SO_0000673
so part of: LOC119947415
location: complement(1415563..1415639)
location: region:1415563-1415639:-1
so has part: feature:1415563-1415639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415563-1415639:-1:exon

LOC119947416
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947416
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1417180..1417255)
location: region:1417180-1417255:-1
so has part: feature:1417180-1417255:-1:exon
subclass of: SO_0000578

119947416
type: Gene
SIO_000068: ncbigene

position:1417180:-1
position: 1417180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417255:-1
position: 1417255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417180-1417255:-1:exon

LOC119947416
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119947416
product: small nucleolar RNA SNORD83
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00137
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456490.1
SIO_010081: LOC119947416
subclass of: SO_0000673
so part of: LOC119947416
location: complement(1417180..1417255)
location: region:1417180-1417255:-1
so has part: feature:1417180-1417255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417180-1417255:-1:exon

ATP6V1G2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ATP6V1G2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1424816..1426771)
location: region:1424816-1426771:-1
so has part: feature:1424816-1426771:-1:exon
subclass of: SO_0000010

119947284
type: Gene
SIO_000068: ncbigene

position:1424816:-1
position: 1424816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426771:-1
position: 1426771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424816-1426771:-1:exon

ATP6V1G2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATP6V1G2
product: ATPase H+ transporting V1 subunit G2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768906.1
SIO_010081: ATP6V1G2
subclass of: SO_0000673
so part of: ATP6V1G2
location: complement(join(1424816..1425146,1426223..1426323,1426562..1426771))
location: region:1424816-1426771:-1
so has part: feature:1426562-1426771:-1:exon
so has part: feature:1426223-1426323:-1:exon
so has part: feature:1424816-1425146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1426562-1426771:-1:exon

position:1426562:-1
position: 1426562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1426223-1426323:-1:exon

position:1426223:-1
position: 1426223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426323:-1
position: 1426323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1424816-1425146:-1:exon

position:1425146:-1
position: 1425146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V1G2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATP6V1G2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit G 2
translation: MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEHYRREREQEFQSKQQAAMGSQGNVSAEVEQGTRRQVQDMQSAQQRSRERVLARLLTLVCDVKPQIHLNYRITA
SIO_010081: ATP6V1G2
subclass of: SO_0000673
so part of: ATP6V1G2
location: complement(join(1424973..1425146,1426223..1426323,1426562..1426643))
location: region:1424973-1426643:-1
so has part: feature:1426562-1426643:-1:exon
so has part: feature:1426223-1426323:-1:exon
so has part: feature:1424973-1425146:-1:exon

XP_038624834.1
type: Protein
SIO_000068: ncbiprotein

position:1424973:-1
position: 1424973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426643:-1
position: 1426643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426562-1426643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1426223-1426323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424973-1425146:-1:exon

NFKBIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NFKBIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1428539..1433019
location: region:1428539-1433019:1
so has part: feature:1428539-1433019:1:exon
subclass of: SO_0000010

119947282
type: Gene
SIO_000068: ncbigene

position:1428539:1
position: 1428539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433019:1
position: 1433019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428539-1433019:1:exon

NFKBIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NFKBIL1
product: NFKB inhibitor like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768905.1
SIO_010081: NFKBIL1
subclass of: SO_0000673
so part of: NFKBIL1
location: join(1428539..1428695,1431242..1431518,1431922..1432146,1432382..1433019)
location: region:1428539-1433019:1
so has part: feature:1428539-1428695:1:exon
so has part: feature:1431242-1431518:1:exon
so has part: feature:1431922-1432146:1:exon
so has part: feature:1432382-1433019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428539-1428695:1:exon

position:1428695:1
position: 1428695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1431242-1431518:1:exon

position:1431242:1
position: 1431242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431518:1
position: 1431518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1431922-1432146:1:exon

position:1431922:1
position: 1431922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432146:1
position: 1432146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1432382-1433019:1:exon

position:1432382:1
position: 1432382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFKBIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NFKBIL1
product: NFKB inhibitor like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038768904.1
SIO_010081: NFKBIL1
subclass of: SO_0000673
so part of: NFKBIL1
location: join(1428623..1428695,1429804..1429975,1431242..1431518,1431922..1432146,1432382..1433019)
location: region:1428623-1433019:1
so has part: feature:1428623-1428695:1:exon
so has part: feature:1429804-1429975:1:exon
so has part: feature:1431242-1431518:1:exon
so has part: feature:1431922-1432146:1:exon
so has part: feature:1432382-1433019:1:exon

position:1428623:1
position: 1428623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428623-1428695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1429804-1429975:1:exon

position:1429804:1
position: 1429804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429975:1
position: 1429975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1431242-1431518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1431922-1432146:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432382-1433019:1:exon

NFKBIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NFKBIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor-like protein 1
translation: MGSSSRRHRREHRFRRYLSTGRLGRARALLRRHPELDVDSGQPPPLHRACARRDPPALRLLLRRGADPARQDRHGDTALHAAARQGPDAYKDLFLPLLSRCPAAMGMRNKSGETPGELLGWGAHPEPPPPQEEPSGEAEDAEWRWKLYEELQDEWQEILGRFEDDDPQEEPETYSAWTERLAREHAQRRRQRDEPRRPRHPAPSTPYGRRWPDEGEEQRLYRERARAKERELQESRARREREKERERAEERAGDPGRRLWGFKDVPWPGPGGGDAEAMAAALLAGGPPTEPAEPFRKFLRAQRVLWHPDRFLQRFGSRLDPRERARVLEAVTALSQALNRRAESLK
SIO_010081: NFKBIL1
subclass of: SO_0000673
so part of: NFKBIL1
location: join(1431254..1431518,1431922..1432146,1432382..1432932)
location: region:1431254-1432932:1
so has part: feature:1431254-1431518:1:exon
so has part: feature:1431922-1432146:1:exon
so has part: feature:1432382-1432932:1:exon

XP_038624832.1
type: Protein
SIO_000068: ncbiprotein

position:1431254:1
position: 1431254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432932:1
position: 1432932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431254-1431518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1431922-1432146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1432382-1432932:1:exon

NFKBIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NFKBIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor-like protein 1
translation: MGSSSRRHRREHRFRRYLSTGRLGRARALLRRHPELDVDSGQPPPLHRACARRDPPALRLLLRRGADPARQDRHGDTALHAAARQGPDAYKDLFLPLLSRCPAAMGMRNKSGETPGELLGWGAHPEPPPPQEEPSGEAEDAEWRWKLYEELQDEWQEILGRFEDDDPQEEPETYSAWTERLAREHAQRRRQRDEPRRPRHPAPSTPYGRRWPDEGEEQRLYRERARAKERELQESRARREREKERERAEERAGDPGRRLWGFKDVPWPGPGGGDAEAMAAALLAGGPPTEPAEPFRKFLRAQRVLWHPDRFLQRFGSRLDPRERARVLEAVTALSQALNRRAESLK
SIO_010081: NFKBIL1
subclass of: SO_0000673
so part of: NFKBIL1
location: join(1431254..1431518,1431922..1432146,1432382..1432932)
location: region:1431254-1432932:1
so has part: feature:1431254-1431518:1:exon
so has part: feature:1431922-1432146:1:exon
so has part: feature:1432382-1432932:1:exon

XP_038624833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1431254-1431518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1431922-1432146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1432382-1432932:1:exon

LTA
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1444731..1446821
location: region:1444731-1446821:1
so has part: feature:1444731-1446821:1:exon
subclass of: SO_0000010

119946755
type: Gene
SIO_000068: ncbigene

position:1444731:1
position: 1444731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446821:1
position: 1446821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444731-1446821:1:exon

LTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LTA
product: lymphotoxin alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768203.1
SIO_010081: LTA
subclass of: SO_0000673
so part of: LTA
location: join(1444731..1444773,1445190..1445404,1445814..1445918,1446044..1446152,1446403..1446821)
location: region:1444731-1446821:1
so has part: feature:1444731-1444773:1:exon
so has part: feature:1445190-1445404:1:exon
so has part: feature:1445814-1445918:1:exon
so has part: feature:1446044-1446152:1:exon
so has part: feature:1446403-1446821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1444731-1444773:1:exon

position:1444773:1
position: 1444773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445190-1445404:1:exon

position:1445190:1
position: 1445190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445404:1
position: 1445404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445814-1445918:1:exon

position:1445814:1
position: 1445814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445918:1
position: 1445918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1446044-1446152:1:exon

position:1446044:1
position: 1446044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446152:1
position: 1446152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1446403-1446821:1:exon

position:1446403:1
position: 1446403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphotoxin-alpha
translation: MTLHVIEMFCMGYNETPVSSSKLQGASPVPLPAASSIKDSDVRAQEAQRTAGRGPPGRMIPPCGPLHPSLLPPRPLLSSAKCHPEPALPMTPLRCRTRQPASLAGALCLLGGLSLLLLGVQGHLGGPGVPRSPHLTAHLDLRRRLLRDAPKPAAHLIGDPSRPGSLLWRDNSDHAFLHHGFRLQNNTLLVPSSGVYFVYTQTVFSGPGCTEDGQGTLAPNYLSHEVLLFSTQYPIHVPLLSAQKSVCPGPKGPWIKSIYQGAVFSLMAGDQLSTRTEGVSNLLLVPGSVFFGAFAV
SIO_010081: LTA
subclass of: SO_0000673
so part of: LTA
location: join(1444731..1444773,1445190..1445404,1445814..1445918,1446044..1446152,1446403..1446821)
location: region:1444731-1446821:1
so has part: feature:1444731-1444773:1:exon
so has part: feature:1445190-1445404:1:exon
so has part: feature:1445814-1445918:1:exon
so has part: feature:1446044-1446152:1:exon
so has part: feature:1446403-1446821:1:exon

XP_038624131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444731-1444773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1445190-1445404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445814-1445918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446044-1446152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446403-1446821:1:exon

TNF
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1451143..1453488
location: region:1451143-1453488:1
so has part: feature:1451143-1453488:1:exon
subclass of: SO_0000010

119947339
type: Gene
SIO_000068: ncbigene

position:1451143:1
position: 1451143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453488:1
position: 1453488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451143-1453488:1:exon

TNF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TNF
product: tumor necrosis factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768985.1
SIO_010081: TNF
subclass of: SO_0000673
so part of: TNF
location: join(1451143..1451530,1452188..1452224,1452397..1452441,1453038..1453488)
location: region:1451143-1453488:1
so has part: feature:1451143-1451530:1:exon
so has part: feature:1452188-1452224:1:exon
so has part: feature:1452397-1452441:1:exon
so has part: feature:1453038-1453488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1451143-1451530:1:exon

position:1451530:1
position: 1451530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452188-1452224:1:exon

position:1452188:1
position: 1452188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452224:1
position: 1452224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452397-1452441:1:exon

position:1452397:1
position: 1452397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452441:1
position: 1452441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1453038-1453488:1:exon

position:1453038:1
position: 1453038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TNF
product: tumor necrosis factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038768986.1
SIO_010081: TNF
subclass of: SO_0000673
so part of: TNF
location: join(1451143..1451530,1452191..1452224,1452397..1452441,1453038..1453488)
location: region:1451143-1453488:1
so has part: feature:1451143-1451530:1:exon
so has part: feature:1452191-1452224:1:exon
so has part: feature:1452397-1452441:1:exon
so has part: feature:1453038-1453488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1451143-1451530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452191-1452224:1:exon

position:1452191:1
position: 1452191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452397-1452441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453038-1453488:1:exon

TNF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor isoform X1
translation: MSMENMLRDIELAGEPAGKTAGARRFGHCLCLSLISFFLVAGATTLFCLIHFGVIGPQDREQDSPLLPLTQMLKSYQPSAEKPAAHVVANSQEDKKLVWVGGRANALLEGSVILNNNQLVVPASGLYLVYSQILFKDSSCPANPDDSPILTHNVSRFSESYEHEVSILSAIKTPCQGGAKGTWYEPIYQGGIFRLNQGDRLSSQTNSPEYLDFSMEGQVYFGIIAL
SIO_010081: TNF
subclass of: SO_0000673
so part of: TNF
location: join(1451348..1451530,1452188..1452224,1452397..1452441,1453038..1453453)
location: region:1451348-1453453:1
so has part: feature:1451348-1451530:1:exon
so has part: feature:1452188-1452224:1:exon
so has part: feature:1452397-1452441:1:exon
so has part: feature:1453038-1453453:1:exon

XP_038624913.1
type: Protein
SIO_000068: ncbiprotein

position:1451348:1
position: 1451348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453453:1
position: 1453453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451348-1451530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452188-1452224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452397-1452441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453038-1453453:1:exon

TNF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor isoform X2
translation: MSMENMLRDIELAGEPAGKTAGARRFGHCLCLSLISFFLVAGATTLFCLIHFGVIGPQDREDSPLLPLTQMLKSYQPSAEKPAAHVVANSQEDKKLVWVGGRANALLEGSVILNNNQLVVPASGLYLVYSQILFKDSSCPANPDDSPILTHNVSRFSESYEHEVSILSAIKTPCQGGAKGTWYEPIYQGGIFRLNQGDRLSSQTNSPEYLDFSMEGQVYFGIIAL
SIO_010081: TNF
subclass of: SO_0000673
so part of: TNF
location: join(1451348..1451530,1452191..1452224,1452397..1452441,1453038..1453453)
location: region:1451348-1453453:1
so has part: feature:1451348-1451530:1:exon
so has part: feature:1452191-1452224:1:exon
so has part: feature:1452397-1452441:1:exon
so has part: feature:1453038-1453453:1:exon

XP_038624914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1451348-1451530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452191-1452224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452397-1452441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453038-1453453:1:exon

LTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1462130..1469935)
location: region:1462130-1469935:-1
so has part: feature:1462130-1469935:-1:exon
subclass of: SO_0000010

119947402
type: Gene
SIO_000068: ncbigene

position:1462130:-1
position: 1462130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469935:-1
position: 1469935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462130-1469935:-1:exon

LTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LTB
product: lymphotoxin beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038769082.1
SIO_010081: LTB
subclass of: SO_0000673
so part of: LTB
location: complement(join(1462130..1462575,1465816..1465963,1469801..1469935))
location: region:1462130-1469935:-1
so has part: feature:1469801-1469935:-1:exon
so has part: feature:1465816-1465963:-1:exon
so has part: feature:1462130-1462575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469801-1469935:-1:exon

position:1469801:-1
position: 1469801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1465816-1465963:-1:exon

position:1465816:-1
position: 1465816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465963:-1
position: 1465963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1462130-1462575:-1:exon

position:1462575:-1
position: 1462575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphotoxin-beta
translation: MGVRGGEQGLPLLAVVGASVLGTLLVCVPLTTLVTMALGPRSWGQEAAPEPPRGQRQRQSGEEPFRDPGVLPPGPAEDWGLEEATIRNPAAHLIGIQGHGPGHVLHWVTGHEEAFLKSGARLLGTARLALPREGVYYLYCHVGFRGRGSGGHPGAGITVSSRLYRVGGGYGAGEVELMLQGAETVIPPPGDGPGPGGLWHTSVGFGGLTRLGGDERIFVNVSHPNMVDYRRGKTYFGAVRVG
SIO_010081: LTB
subclass of: SO_0000673
so part of: LTB
location: complement(join(1462130..1462575,1465816..1465963,1469801..1469935))
location: region:1462130-1469935:-1
so has part: feature:1469801-1469935:-1:exon
so has part: feature:1465816-1465963:-1:exon
so has part: feature:1462130-1462575:-1:exon

XP_038625010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1469801-1469935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465816-1465963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1462130-1462575:-1:exon

LST1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1481508..1488674
location: region:1481508-1488674:1
so has part: feature:1481508-1488674:1:exon
subclass of: SO_0000010

119947332
type: Gene
SIO_000068: ncbigene

position:1481508:1
position: 1481508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488674:1
position: 1488674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481508-1488674:1:exon

LST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LST1
product: leukocyte specific transcript 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768975.1
SIO_010081: LST1
subclass of: SO_0000673
so part of: LST1
location: join(1481508..1481595,1482888..1482929,1486296..1486412,1487210..1487232,1488220..1488674)
location: region:1481508-1488674:1
so has part: feature:1481508-1481595:1:exon
so has part: feature:1482888-1482929:1:exon
so has part: feature:1486296-1486412:1:exon
so has part: feature:1487210-1487232:1:exon
so has part: feature:1488220-1488674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1481508-1481595:1:exon

position:1481595:1
position: 1481595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1482888-1482929:1:exon

position:1482888:1
position: 1482888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482929:1
position: 1482929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1486296-1486412:1:exon

position:1486296:1
position: 1486296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486412:1
position: 1486412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1487210-1487232:1:exon

position:1487210:1
position: 1487210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487232:1
position: 1487232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1488220-1488674:1:exon

position:1488220:1
position: 1488220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukocyte-specific transcript 1 protein
translation: MSCSVCNCKTIHCEAVCCFLIGLAGVTIGLVVAVIILAICLCRLQKQVQRLQRSKAQDNSLELREEQELHYASLRRLPIGDTGEGAREEGPKEEAKNPTEDVSSDYASVVKRPDPS
SIO_010081: LST1
subclass of: SO_0000673
so part of: LST1
location: join(1482905..1482929,1486296..1486412,1487210..1487232,1488220..1488405)
location: region:1482905-1488405:1
so has part: feature:1482905-1482929:1:exon
so has part: feature:1486296-1486412:1:exon
so has part: feature:1487210-1487232:1:exon
so has part: feature:1488220-1488405:1:exon

XP_038624903.1
type: Protein
SIO_000068: ncbiprotein

position:1482905:1
position: 1482905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488405:1
position: 1488405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482905-1482929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486296-1486412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487210-1487232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488220-1488405:1:exon

AIF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1499200..1502546
location: region:1499200-1502546:1
so has part: feature:1499200-1502546:1:exon
subclass of: SO_0000010

119947261
type: Gene
SIO_000068: ncbigene

position:1499200:1
position: 1499200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502546:1
position: 1502546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499200-1502546:1:exon

AIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AIF1
product: allograft inflammatory factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038768874.1
SIO_010081: AIF1
subclass of: SO_0000673
so part of: AIF1
location: join(1499200..1499315,1499805..1499866,1500031..1500097,1500233..1500274,1501086..1501249,1502379..1502546)
location: region:1499200-1502546:1
so has part: feature:1499200-1499315:1:exon
so has part: feature:1499805-1499866:1:exon
so has part: feature:1500031-1500097:1:exon
so has part: feature:1500233-1500274:1:exon
so has part: feature:1501086-1501249:1:exon
so has part: feature:1502379-1502546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1499200-1499315:1:exon

position:1499315:1
position: 1499315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1499805-1499866:1:exon

position:1499805:1
position: 1499805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499866:1
position: 1499866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1500031-1500097:1:exon

position:1500031:1
position: 1500031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500097:1
position: 1500097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1500233-1500274:1:exon

position:1500233:1
position: 1500233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500274:1
position: 1500274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1501086-1501249:1:exon

position:1501086:1
position: 1501086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501249:1
position: 1501249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1502379-1502546:1:exon

position:1502379:1
position: 1502379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AIF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: allograft inflammatory factor 1
translation: MSQGQNLQGGKAYGEFLVQQEQRLDGINQQFLDDPKYCSDEELPQKLQAFSKKYMEFDLNGEGDIDIMSLKRMLEKLGTPKTHLELKKMIGEVAGGQRETISYQDFVRMMLGKKSAIFKIILMYEEKGRQQEKPTGPPAKKTISELP
SIO_010081: AIF1
subclass of: SO_0000673
so part of: AIF1
location: join(1499291..1499315,1499805..1499866,1500031..1500097,1500233..1500274,1501086..1501249,1502379..1502463)
location: region:1499291-1502463:1
so has part: feature:1499291-1499315:1:exon
so has part: feature:1499805-1499866:1:exon
so has part: feature:1500031-1500097:1:exon
so has part: feature:1500233-1500274:1:exon
so has part: feature:1501086-1501249:1:exon
so has part: feature:1502379-1502463:1:exon

XP_038624802.1
type: Protein
SIO_000068: ncbiprotein

position:1499291:1
position: 1499291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502463:1
position: 1502463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499291-1499315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1499805-1499866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1500031-1500097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500233-1500274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1501086-1501249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1502379-1502463:1:exon

PRRC2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PRRC2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1510029..1522373
location: region:1510029-1522373:1
so has part: feature:1510029-1522373:1:exon
subclass of: SO_0000010

119947064
type: Gene
SIO_000068: ncbigene

position:1510029:1
position: 1510029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522373:1
position: 1522373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510029-1522373:1:exon

PRRC2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PRRC2A
product: proline rich coiled-coil 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038768566.1
SIO_010081: PRRC2A
subclass of: SO_0000673
so part of: PRRC2A
location: join(1510029..1510140,1510563..1510740,1511113..1511212,1511300..1511372,1511500..1511643,1512132..1512265,1512387..1512466,1512553..1512695,1513018..1513108,1513575..1513800,1513972..1514482,1514800..1514996,1515144..1515453,1515599..1515809,1515935..1517794,1517893..1518147,1518256..1518377,1518539..1518668,1518780..1518865,1518967..1519201,1519292..1519423,1519541..1519615,1519745..1519924,1520038..1520120,1520273..1520483,1520594..1520692,1520832..1521056,1521744..1521832,1521918..1522008,1522092..1522373)
location: region:1510029-1522373:1
so has part: feature:1510029-1510140:1:exon
so has part: feature:1510563-1510740:1:exon
so has part: feature:1511113-1511212:1:exon
so has part: feature:1511300-1511372:1:exon
so has part: feature:1511500-1511643:1:exon
so has part: feature:1512132-1512265:1:exon
so has part: feature:1512387-1512466:1:exon
so has part: feature:1512553-1512695:1:exon
so has part: feature:1513018-1513108:1:exon
so has part: feature:1513575-1513800:1:exon
so has part: feature:1513972-1514482:1:exon
so has part: feature:1514800-1514996:1:exon
so has part: feature:1515144-1515453:1:exon
so has part: feature:1515599-1515809:1:exon
so has part: feature:1515935-1517794:1:exon
so has part: feature:1517893-1518147:1:exon
so has part: feature:1518256-1518377:1:exon
so has part: feature:1518539-1518668:1:exon
so has part: feature:1518780-1518865:1:exon
so has part: feature:1518967-1519201:1:exon
so has part: feature:1519292-1519423:1:exon
so has part: feature:1519541-1519615:1:exon
so has part: feature:1519745-1519924:1:exon
so has part: feature:1520038-1520120:1:exon
so has part: feature:1520273-1520483:1:exon
so has part: feature:1520594-1520692:1:exon
so has part: feature:1520832-1521056:1:exon
so has part: feature:1521744-1521832:1:exon
so has part: feature:1521918-1522008:1:exon
so has part: feature:1522092-1522373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1510029-1510140:1:exon

position:1510140:1
position: 1510140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510563-1510740:1:exon

position:1510563:1
position: 1510563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510740:1
position: 1510740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1511113-1511212:1:exon

position:1511113:1
position: 1511113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511212:1
position: 1511212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1511300-1511372:1:exon

position:1511300:1
position: 1511300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511372:1
position: 1511372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1511500-1511643:1:exon

position:1511500:1
position: 1511500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511643:1
position: 1511643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1512132-1512265:1:exon

position:1512132:1
position: 1512132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512265:1
position: 1512265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1512387-1512466:1:exon

position:1512387:1
position: 1512387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512466:1
position: 1512466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1512553-1512695:1:exon

position:1512553:1
position: 1512553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512695:1
position: 1512695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1513018-1513108:1:exon

position:1513018:1
position: 1513018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513108:1
position: 1513108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1513575-1513800:1:exon

position:1513575:1
position: 1513575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513800:1
position: 1513800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1513972-1514482:1:exon

position:1513972:1
position: 1513972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514482:1
position: 1514482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1514800-1514996:1:exon

position:1514800:1
position: 1514800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514996:1
position: 1514996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1515144-1515453:1:exon

position:1515144:1
position: 1515144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515453:1
position: 1515453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1515599-1515809:1:exon

position:1515599:1
position: 1515599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515809:1
position: 1515809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1515935-1517794:1:exon

position:1515935:1
position: 1515935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517794:1
position: 1517794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1517893-1518147:1:exon

position:1517893:1
position: 1517893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518147:1
position: 1518147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1518256-1518377:1:exon

position:1518256:1
position: 1518256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518377:1
position: 1518377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1518539-1518668:1:exon

position:1518539:1
position: 1518539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518668:1
position: 1518668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1518780-1518865:1:exon

position:1518780:1
position: 1518780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518865:1
position: 1518865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1518967-1519201:1:exon

position:1518967:1
position: 1518967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519201:1
position: 1519201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1519292-1519423:1:exon

position:1519292:1
position: 1519292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519423:1
position: 1519423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1519541-1519615:1:exon

position:1519541:1
position: 1519541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519615:1
position: 1519615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1519745-1519924:1:exon

position:1519745:1
position: 1519745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519924:1
position: 1519924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1520038-1520120:1:exon

position:1520038:1
position: 1520038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520120:1
position: 1520120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1520273-1520483:1:exon

position:1520273:1
position: 1520273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520483:1
position: 1520483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1520594-1520692:1:exon

position:1520594:1
position: 1520594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520692:1
position: 1520692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1520832-1521056:1:exon

position:1520832:1
position: 1520832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521056:1
position: 1521056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1521744-1521832:1:exon

position:1521744:1
position: 1521744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521832:1
position: 1521832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1521918-1522008:1:exon

position:1521918:1
position: 1521918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522008:1
position: 1522008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1522092-1522373:1:exon

position:1522092:1
position: 1522092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRRC2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PRRC2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein PRRC2A
translation: MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRMPPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQTDPKSSDASTAQPPESQPPPASQTPASSQPKRPPAGPENAPSAPSAAKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEPSSGPGPSLRPQNATTWRDGGGRGPEELEGPDSRLHAGLQPAGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRLAGPRGAGPQLRLAEPVSRPAILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGRKEPRPAGEERPPGLEADGQKGGSPPAEPPPPKTAWAENSRPPEGEPGPPPPKPPPPPPPPHRGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEAPAAAAAPPAPAAAPATVAAVPAPAVVAAAPLPPGPPTAPPAPAPSPEKEPREPAVTPIPPLPPAPAPASAPPPGPAPAPAGGNGPGGFDTGPAEPLLPTKDGPEPSEEAPQPATPPTPKVEPKVDGTGTGPARPPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQQQWQQQQQQQQQSSAPPTPVPPSPPQPVALGPVPAPPAPPQPPKALYPGSLGRPPPMPPLNFDPRWMMIPPYMDPRLIQGRAPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHPTPLLRERGTPPVDAKLAWAGDVFAAGNADPRPLPSPLRQAADEDDKGMRSETPPAPPPPPYLATYPGFPENGAPGPPLSRFPLEEPAPPGTRPAPWAPGDETPKLPAPPKKEPPKEEAPPGVPEAGRKPPRGANGGPPLRRESRTETRWGPRPGSSRRGPPEEAGGMGAPPPPRRAGPIKKPLGLPKAEESPAKAPEAAEETPRPDPLKPPKVKAGMVAAAVGKEPPLGGGGPPAPSPRPRRDYSSEGPGPCRGRGRGEYFARGRGFRGTYGGRGRGGRGGREFRSSREFRAEDGHGVGGPGPHPLPPRGRTASETRSEGSEYEEVPKRRRQRGSETGSETHESDLAPSDKEVAVPPAAPPPLPAHPSPAPGARFPAARGGRVFTPRGVPSRRGRGGGRPPGMAAWSPPVKALGPKKPLGGPPPPLPPPNKEAVVVVIGAKEKTPGGGPILGPPQRAGLEDGERPRRRRHGRAQQQDKPPRFRRLKQERDNAARGADGPPPPPAPAPAPDEPPDAAPGSAPAPPAPAPAPAPVSSQPAQPPPRRVAAKSPDLSNQNSDQANEEWETASESSDFAGERRGDKEAPPAALLTPKSGGGGPTGGPGPRPEPSHRARDLSKRSFSSQRPGMERQNRRPGPTGKAGGGAGGGPGGRAGPGRGDKRNWPSPKNRSRPPEEQPMGLPLPPPPPSSSAVFRLDRVIHSDPAGIQQALAQLSGRQAAPEAAPPRPKPGPPAAPRAPAHYELPRAGSQGTASTDPHFVEPGPAARGVDSAGASPFPPKRRERGTPRKPELLPPEEALPPPHGPAFLGPKPEGPGPRGEPRDPGTETLAPHIWNRLHGTASRKSYRPGAAEPWMEPLTPLEDGPGTEMSQSDSGVDLSGSSQVSSGPCSQRSSPDGGLKAVGEGAPKRPGGPSPLSATSAEGPPGPEPPDPSRRRPPAPRDGDKKEPPPPPGPIGTERGQRADRGQETAGVPRDPHRPGPPIQFGASDKDSDLRLSLAEGVKPEEDLTPAGGEGPAPGPRDWELLPPRSQPAEPRPKSLGPPPCGPEPGPSPGPSGPRLYPELFYGGAGPPGSQVPGAAVDSTLHPNTGAFRPSTPSLHPFRSQPLYLPPGPAPGSALLSGVALKGQFLELSALQAAELGKLPGGGVLYPPPSFLYPPAFCPSPLPDPALLQVRQDLPSPSDFYSAPLQPGGQNGFLPPAAPAQQMLLPVVES…
SIO_010081: PRRC2A
subclass of: SO_0000673
so part of: PRRC2A
location: join(1510029..1510140,1510563..1510740,1511113..1511212,1511300..1511372,1511500..1511643,1512132..1512265,1512387..1512466,1512553..1512695,1513018..1513108,1513575..1513800,1513972..1514482,1514800..1514996,1515144..1515453,1515599..1515809,1515935..1517794,1517893..1518147,1518256..1518377,1518539..1518668,1518780..1518865,1518967..1519201,1519292..1519423,1519541..1519615,1519745..1519924,1520038..1520120,1520273..1520483,1520594..1520692,1520832..1521056,1521744..1521832,1521918..1522008,1522092..1522235)
location: region:1510029-1522235:1
so has part: feature:1510029-1510140:1:exon
so has part: feature:1510563-1510740:1:exon
so has part: feature:1511113-1511212:1:exon
so has part: feature:1511300-1511372:1:exon
so has part: feature:1511500-1511643:1:exon
so has part: feature:1512132-1512265:1:exon
so has part: feature:1512387-1512466:1:exon
so has part: feature:1512553-1512695:1:exon
so has part: feature:1513018-1513108:1:exon
so has part: feature:1513575-1513800:1:exon
so has part: feature:1513972-1514482:1:exon
so has part: feature:1514800-1514996:1:exon
so has part: feature:1515144-1515453:1:exon
so has part: feature:1515599-1515809:1:exon
so has part: feature:1515935-1517794:1:exon
so has part: feature:1517893-1518147:1:exon
so has part: feature:1518256-1518377:1:exon
so has part: feature:1518539-1518668:1:exon
so has part: feature:1518780-1518865:1:exon
so has part: feature:1518967-1519201:1:exon
so has part: feature:1519292-1519423:1:exon
so has part: feature:1519541-1519615:1:exon
so has part: feature:1519745-1519924:1:exon
so has part: feature:1520038-1520120:1:exon
so has part: feature:1520273-1520483:1:exon
so has part: feature:1520594-1520692:1:exon
so has part: feature:1520832-1521056:1:exon
so has part: feature:1521744-1521832:1:exon
so has part: feature:1521918-1522008:1:exon
so has part: feature:1522092-1522235:1:exon

XP_038624494.1
type: Protein
SIO_000068: ncbiprotein

position:1522235:1
position: 1522235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510029-1510140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1510563-1510740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1511113-1511212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511300-1511372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1511500-1511643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1512132-1512265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1512387-1512466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1512553-1512695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1513018-1513108:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1513575-1513800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1513972-1514482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1514800-1514996:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1515144-1515453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1515599-1515809:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515935-1517794:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1517893-1518147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1518256-1518377:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1518539-1518668:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1518780-1518865:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1518967-1519201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1519292-1519423:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1519541-1519615:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1519745-1519924:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1520038-1520120:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1520273-1520483:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1520594-1520692:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1520832-1521056:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1521744-1521832:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1521918-1522008:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1522092-1522235:1:exon

BAG6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: BAG6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1522550..1535497)
location: region:1522550-1535497:-1
so has part: feature:1522550-1535497:-1:exon
subclass of: SO_0000010

119947108
type: Gene
SIO_000068: ncbigene

position:1522550:-1
position: 1522550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535497:-1
position: 1535497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522550-1535497:-1:exon

BAG6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: BAG6
product: BAG cochaperone 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768640.1
SIO_010081: BAG6
subclass of: SO_0000673
so part of: BAG6
location: complement(join(1522550..1522733,1522925..1523071,1523174..1523281,1523361..1523510,1523584..1523640,1523741..1523887,1524052..1524176,1524261..1524363,1524511..1524564,1524664..1524833,1524983..1525271,1525580..1525888,1526116..1526200,1526311..1526426,1526552..1526662,1526758..1526829,1527063..1527300,1527727..1527924,1528720..1528849,1529190..1529419,1529664..1529738,1529866..1529919,1530063..1530262,1530412..1530529,1533534..1533672,1535438..1535497))
location: region:1522550-1535497:-1
so has part: feature:1535438-1535497:-1:exon
so has part: feature:1533534-1533672:-1:exon
so has part: feature:1530412-1530529:-1:exon
so has part: feature:1530063-1530262:-1:exon
so has part: feature:1529866-1529919:-1:exon
so has part: feature:1529664-1529738:-1:exon
so has part: feature:1529190-1529419:-1:exon
so has part: feature:1528720-1528849:-1:exon
so has part: feature:1527727-1527924:-1:exon
so has part: feature:1527063-1527300:-1:exon
so has part: feature:1526758-1526829:-1:exon
so has part: feature:1526552-1526662:-1:exon
so has part: feature:1526311-1526426:-1:exon
so has part: feature:1526116-1526200:-1:exon
so has part: feature:1525580-1525888:-1:exon
so has part: feature:1524983-1525271:-1:exon
so has part: feature:1524664-1524833:-1:exon
so has part: feature:1524511-1524564:-1:exon
so has part: feature:1524261-1524363:-1:exon
so has part: feature:1524052-1524176:-1:exon
so has part: feature:1523741-1523887:-1:exon
so has part: feature:1523584-1523640:-1:exon
so has part: feature:1523361-1523510:-1:exon
so has part: feature:1523174-1523281:-1:exon
so has part: feature:1522925-1523071:-1:exon
so has part: feature:1522550-1522733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1535438-1535497:-1:exon

position:1535438:-1
position: 1535438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1533534-1533672:-1:exon

position:1533534:-1
position: 1533534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533672:-1
position: 1533672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530412-1530529:-1:exon

position:1530412:-1
position: 1530412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530529:-1
position: 1530529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1530063-1530262:-1:exon

position:1530063:-1
position: 1530063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530262:-1
position: 1530262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1529866-1529919:-1:exon

position:1529866:-1
position: 1529866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529919:-1
position: 1529919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1529664-1529738:-1:exon

position:1529664:-1
position: 1529664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529738:-1
position: 1529738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1529190-1529419:-1:exon

position:1529190:-1
position: 1529190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529419:-1
position: 1529419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1528720-1528849:-1:exon

position:1528720:-1
position: 1528720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528849:-1
position: 1528849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1527727-1527924:-1:exon

position:1527727:-1
position: 1527727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527924:-1
position: 1527924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1527063-1527300:-1:exon

position:1527063:-1
position: 1527063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527300:-1
position: 1527300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1526758-1526829:-1:exon

position:1526758:-1
position: 1526758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526829:-1
position: 1526829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1526552-1526662:-1:exon

position:1526552:-1
position: 1526552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526662:-1
position: 1526662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1526311-1526426:-1:exon

position:1526311:-1
position: 1526311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526426:-1
position: 1526426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1526116-1526200:-1:exon

position:1526116:-1
position: 1526116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526200:-1
position: 1526200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1525580-1525888:-1:exon

position:1525580:-1
position: 1525580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525888:-1
position: 1525888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1524983-1525271:-1:exon

position:1524983:-1
position: 1524983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525271:-1
position: 1525271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1524664-1524833:-1:exon

position:1524664:-1
position: 1524664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524833:-1
position: 1524833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1524511-1524564:-1:exon

position:1524511:-1
position: 1524511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524564:-1
position: 1524564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1524261-1524363:-1:exon

position:1524261:-1
position: 1524261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524363:-1
position: 1524363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1524052-1524176:-1:exon

position:1524052:-1
position: 1524052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524176:-1
position: 1524176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1523741-1523887:-1:exon

position:1523741:-1
position: 1523741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523887:-1
position: 1523887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1523584-1523640:-1:exon

position:1523584:-1
position: 1523584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523640:-1
position: 1523640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1523361-1523510:-1:exon

position:1523361:-1
position: 1523361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523510:-1
position: 1523510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1523174-1523281:-1:exon

position:1523174:-1
position: 1523174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523281:-1
position: 1523281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1522925-1523071:-1:exon

position:1522925:-1
position: 1522925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523071:-1
position: 1523071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1522550-1522733:-1:exon

position:1522733:-1
position: 1522733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAG6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: BAG6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: large proline-rich protein BAG6
translation: MDPGDGGSGGGGGHSNDMEEPADLEVLVKTLDSQTRTFTVGAEMTVKEFKEHIAAAVSIPPDKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTQGPSSGGASRAGSPSAPHAGAPPAGPRGPGAPVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMLRDIQALLARLEGRANGQPQPGQPGQPGQLGQAQALPAESGPPRPGPSGPTDGDTSPREPTETREPEDSMAPRGTGPAPAPAPEGNAPNHPSPAEYAEVLQELQRVESRLQPFLQRYRAILGAAATTDYNNNTEGREEDQRVINLVGESLRLLGNTFVALSDLRCNLSATAPRHLHVVRPMSHYTAPMVLQQAAIPIQINVGTTVTMTGSGARPGPTDTTPAPGQTSSPTPSPTSGEPGTDGAPSGPAPPQAAGPPRLIRISHQSVEPVVMMHMNIPDSGSQTGGASSASTGPSGPPGQGLGGPTHIQLPSLPPEFMQAVAHQITQQAMAAAAASAATGQQVSGFPAAPTRVVIARPTPPQARPPHPGGPPPAPGATIPVPGSNASLAQMVSGLVGQLLMQPVLVAQGASGLGAPQAPATASASAGTTNTATTAGPAPGGPTQPPPPPPPGPPQAEVQFSQLLGSLLGPGGPGGPGAGGGATGVGSPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPQAPEQAPAAAPPGSPPAGPGGAGGGPEALPPEFFTSVVQGVLSSLLGSLGARAGSSESIAGFIQRLSGSSNIFEPGADGALGFFGALLSVICQNLSMVDVVMLLHGHSQPLQRLQPQLRSFFHQHYLGGREPTGPAIRRATHTLITGLEEYVRDSFASVQVQPGVDITRTNLDFLQEQFNGIAAHVLHCTDSSFGGRLLELCNQGLFECLALNLHCLGGQQSALTNVINGRIRRLSGGVNPSLVSWLTTMMGLRLQVLLEHMPVGPDQVLRYVRRLGEPPQPPPEEEPMEIQGAERPEPERENASPAPGTTAEEAMSRGPPPAPEGPPPHEEQDGAAAAESEPWAAAVPPEWVPIIRQDLQTQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKASGARPVTSPDSLRRDLEAPEVQDSYRQQLRSDLQQRLRADPNYSPQHFPNAQRAFMDEP
SIO_010081: BAG6
subclass of: SO_0000673
so part of: BAG6
location: complement(join(1522638..1522733,1522925..1523071,1523174..1523281,1523361..1523510,1523584..1523640,1523741..1523887,1524052..1524176,1524261..1524363,1524511..1524564,1524664..1524833,1524983..1525271,1525580..1525888,1526116..1526200,1526311..1526426,1526552..1526662,1526758..1526829,1527063..1527300,1527727..1527924,1528720..1528849,1529190..1529419,1529664..1529738,1529866..1529919,1530063..1530262,1530412..1530529,1533534..1533662))
location: region:1522638-1533662:-1
so has part: feature:1533534-1533662:-1:exon
so has part: feature:1530412-1530529:-1:exon
so has part: feature:1530063-1530262:-1:exon
so has part: feature:1529866-1529919:-1:exon
so has part: feature:1529664-1529738:-1:exon
so has part: feature:1529190-1529419:-1:exon
so has part: feature:1528720-1528849:-1:exon
so has part: feature:1527727-1527924:-1:exon
so has part: feature:1527063-1527300:-1:exon
so has part: feature:1526758-1526829:-1:exon
so has part: feature:1526552-1526662:-1:exon
so has part: feature:1526311-1526426:-1:exon
so has part: feature:1526116-1526200:-1:exon
so has part: feature:1525580-1525888:-1:exon
so has part: feature:1524983-1525271:-1:exon
so has part: feature:1524664-1524833:-1:exon
so has part: feature:1524511-1524564:-1:exon
so has part: feature:1524261-1524363:-1:exon
so has part: feature:1524052-1524176:-1:exon
so has part: feature:1523741-1523887:-1:exon
so has part: feature:1523584-1523640:-1:exon
so has part: feature:1523361-1523510:-1:exon
so has part: feature:1523174-1523281:-1:exon
so has part: feature:1522925-1523071:-1:exon
so has part: feature:1522638-1522733:-1:exon

XP_038624568.1
type: Protein
SIO_000068: ncbiprotein

position:1522638:-1
position: 1522638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533662:-1
position: 1533662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533534-1533662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530412-1530529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530063-1530262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1529866-1529919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1529664-1529738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1529190-1529419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1528720-1528849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1527727-1527924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1527063-1527300:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1526758-1526829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1526552-1526662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1526311-1526426:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1526116-1526200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1525580-1525888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1524983-1525271:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1524664-1524833:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1524511-1524564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1524261-1524363:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1524052-1524176:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1523741-1523887:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1523584-1523640:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1523361-1523510:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1523174-1523281:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1522925-1523071:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1522638-1522733:-1:exon

APOM
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: APOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1540018..1543831
location: region:1540018-1543831:1
so has part: feature:1540018-1543831:1:exon
subclass of: SO_0000010

119947214
type: Gene
SIO_000068: ncbigene

position:1540018:1
position: 1540018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543831:1
position: 1543831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540018-1543831:1:exon

APOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: APOM
product: apolipoprotein M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768816.1
SIO_010081: APOM
subclass of: SO_0000673
so part of: APOM
location: join(1540018..1540213,1540608..1540762,1541728..1541801,1542183..1542281,1543446..1543541,1543713..1543831)
location: region:1540018-1543831:1
so has part: feature:1540018-1540213:1:exon
so has part: feature:1540608-1540762:1:exon
so has part: feature:1541728-1541801:1:exon
so has part: feature:1542183-1542281:1:exon
so has part: feature:1543446-1543541:1:exon
so has part: feature:1543713-1543831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1540018-1540213:1:exon

position:1540213:1
position: 1540213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1540608-1540762:1:exon

position:1540608:1
position: 1540608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1540762:1
position: 1540762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1541728-1541801:1:exon

position:1541728:1
position: 1541728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541801:1
position: 1541801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1542183-1542281:1:exon

position:1542183:1
position: 1542183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542281:1
position: 1542281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1543446-1543541:1:exon

position:1543446:1
position: 1543446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543541:1
position: 1543541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1543713-1543831:1:exon

position:1543713:1
position: 1543713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: APOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein M
translation: MIHQFWAHLLYLYWTLQNSISRCPGPTPLVIPGPHGEEFPRTYLGYWHFIAGSAPTPDQLATFDPVDNILFHLVPGSTPLELYLRAAIRMKSGLCVPREWTYLLAKGTTNLRIQGRPDMKTELFSAPCAESIILKETGQDFERFLMYSRSPAPPARCVNDFQALVSCWNFTLLQTPRQQGACVLTSS
SIO_010081: APOM
subclass of: SO_0000673
so part of: APOM
location: join(1540100..1540213,1540608..1540762,1541728..1541801,1542183..1542281,1543446..1543541,1543713..1543738)
location: region:1540100-1543738:1
so has part: feature:1540100-1540213:1:exon
so has part: feature:1540608-1540762:1:exon
so has part: feature:1541728-1541801:1:exon
so has part: feature:1542183-1542281:1:exon
so has part: feature:1543446-1543541:1:exon
so has part: feature:1543713-1543738:1:exon

XP_038624744.1
type: Protein
SIO_000068: ncbiprotein

position:1540100:1
position: 1540100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543738:1
position: 1543738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540100-1540213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1540608-1540762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541728-1541801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542183-1542281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543446-1543541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543713-1543738:1:exon

CY4H6orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CY4H6orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1544437..1545759)
location: region:1544437-1545759:-1
so has part: feature:1544437-1545759:-1:exon
subclass of: SO_0000010

119947248
type: Gene
SIO_000068: ncbigene

position:1544437:-1
position: 1544437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1545759:-1
position: 1545759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544437-1545759:-1:exon

CY4H6orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CY4H6orf47
product: chromosome Y4 C6orf47 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768859.1
SIO_010081: CY4H6orf47
subclass of: SO_0000673
so part of: CY4H6orf47
location: complement(1544437..1545759)
location: region:1544437-1545759:-1
so has part: feature:1544437-1545759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1544437-1545759:-1:exon

CY4H6orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CY4H6orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C6orf47 homolog
translation: MFLRRLPAWPSRPWGRQRAGPGPPSSPENSGSEWDSAPEPPGDGEGGRAEPPSPSRAAEEPGRRRGLLGWLRARRAGELGTGPQFSGGLSPAERLRICPNLTRHLLDLLLSAVLALSSPPLRLLLEALGLRGPAGLWLHGLLSFLLALHALHALLALLTAYPLHFACLFGLLQGLVLAVSLREEEEEEEEEEAWREAGDGSPEAWPDGQDEDGREGTPTL
SIO_010081: CY4H6orf47
subclass of: SO_0000673
so part of: CY4H6orf47
location: complement(1544702..1545364)
location: region:1544702-1545364:-1
so has part: feature:1544702-1545364:-1:exon

XP_038624787.1
type: Protein
SIO_000068: ncbiprotein

position:1544702:-1
position: 1544702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1545364:-1
position: 1545364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544702-1545364:-1:exon

GPANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GPANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1548358..1551595)
location: region:1548358-1551595:-1
so has part: feature:1548358-1551595:-1:exon
subclass of: SO_0000010

119947182
type: Gene
SIO_000068: ncbigene

position:1548358:-1
position: 1548358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551595:-1
position: 1551595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548358-1551595:-1:exon

GPANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPANK1
product: G-patch domain and ankyrin repeats 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038768754.1
SIO_010081: GPANK1
subclass of: SO_0000673
so part of: GPANK1
location: complement(join(1548358..1548988,1549750..1550554,1551535..1551595))
location: region:1548358-1551595:-1
so has part: feature:1551535-1551595:-1:exon
so has part: feature:1549750-1550554:-1:exon
so has part: feature:1548358-1548988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1551535-1551595:-1:exon

position:1551535:-1
position: 1551535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1549750-1550554:-1:exon

position:1549750:-1
position: 1549750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550554:-1
position: 1550554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1548358-1548988:-1:exon

position:1548988:-1
position: 1548988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPANK1
product: G-patch domain and ankyrin repeats 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038768755.1
SIO_010081: GPANK1
subclass of: SO_0000673
so part of: GPANK1
location: complement(join(1548358..1548988,1549750..1550554,1551532..1551561))
location: region:1548358-1551561:-1
so has part: feature:1551532-1551561:-1:exon
so has part: feature:1549750-1550554:-1:exon
so has part: feature:1548358-1548988:-1:exon

position:1551561:-1
position: 1551561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1551532-1551561:-1:exon

position:1551532:-1
position: 1551532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1549750-1550554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1548358-1548988:-1:exon

GPANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1
translation: MAHPALIAFTPAQDPGDLWKDGEQRPQQPPEQSRGSPLDGEAVRSFYEDLVGAGSPRRTPVGRTDERKERRRGGGRDRGGPGTRPPVGRTIPRLLKAAQDGDVEALRGLLGPGGDGDVNAHDAFWWTPLMCAARAGRADAVRFLLSRGAAWVGVCEPGGRDAAQLAEEAGFPEVARLVRDSGRPRPPETRSPSPEPRYCDVCQTCYRDANHASSTAHLLALPRGPRTPHPPPGFPASSPGFRLLLRGGWEPGTGLGPHGQGRAEPVATVLKRDLEGLGYGQPPRPRVTHFPAGDPRAVRGPARAPKAATLGKRKEKQREEKSRAWERNLRTYMNLDF
SIO_010081: GPANK1
subclass of: SO_0000673
so part of: GPANK1
location: complement(join(1548544..1548988,1549750..1550318))
location: region:1548544-1550318:-1
so has part: feature:1549750-1550318:-1:exon
so has part: feature:1548544-1548988:-1:exon

XP_038624682.1
type: Protein
SIO_000068: ncbiprotein

position:1548544:-1
position: 1548544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550318:-1
position: 1550318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549750-1550318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1548544-1548988:-1:exon

GPANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1
translation: MAHPALIAFTPAQDPGDLWKDGEQRPQQPPEQSRGSPLDGEAVRSFYEDLVGAGSPRRTPVGRTDERKERRRGGGRDRGGPGTRPPVGRTIPRLLKAAQDGDVEALRGLLGPGGDGDVNAHDAFWWTPLMCAARAGRADAVRFLLSRGAAWVGVCEPGGRDAAQLAEEAGFPEVARLVRDSGRPRPPETRSPSPEPRYCDVCQTCYRDANHASSTAHLLALPRGPRTPHPPPGFPASSPGFRLLLRGGWEPGTGLGPHGQGRAEPVATVLKRDLEGLGYGQPPRPRVTHFPAGDPRAVRGPARAPKAATLGKRKEKQREEKSRAWERNLRTYMNLDF
SIO_010081: GPANK1
subclass of: SO_0000673
so part of: GPANK1
location: complement(join(1548544..1548988,1549750..1550318))
location: region:1548544-1550318:-1
so has part: feature:1549750-1550318:-1:exon
so has part: feature:1548544-1548988:-1:exon

XP_038624683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1549750-1550318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1548544-1548988:-1:exon

CSNK2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CSNK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1551774..1557655
location: region:1551774-1557655:1
so has part: feature:1551774-1557655:1:exon
subclass of: SO_0000010

119947088
type: Gene
SIO_000068: ncbigene

position:1551774:1
position: 1551774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557655:1
position: 1557655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1551774-1557655:1:exon

CSNK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CSNK2B
product: casein kinase 2 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768606.1
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1551774..1551994,1555115..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557655)
location: region:1551774-1557655:1
so has part: feature:1551774-1551994:1:exon
so has part: feature:1555115-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1551774-1551994:1:exon

position:1551994:1
position: 1551994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555115-1555197:1:exon

position:1555115:1
position: 1555115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555197:1
position: 1555197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556424-1556526:1:exon

position:1556424:1
position: 1556424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556526:1
position: 1556526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1556633-1556748:1:exon

position:1556633:1
position: 1556633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556748:1
position: 1556748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1556862-1556937:1:exon

position:1556862:1
position: 1556862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556937:1
position: 1556937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1557070-1557259:1:exon

position:1557070:1
position: 1557070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557259:1
position: 1557259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1557413-1557655:1:exon

position:1557413:1
position: 1557413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSNK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CSNK2B
product: casein kinase 2 beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768608.1
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1551774..1551899,1555115..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557655)
location: region:1551774-1557655:1
so has part: feature:1551774-1551899:1:exon
so has part: feature:1555115-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1551774-1551899:1:exon

position:1551899:1
position: 1551899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555115-1555197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556424-1556526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556633-1556748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1556862-1556937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557070-1557259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1557413-1557655:1:exon

CSNK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CSNK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit beta isoform X1
translation: MEKGRGASTRLVGPSTGDGKMSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQAASNFKSPVKTIR
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1551946..1551994,1555115..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557503)
location: region:1551946-1557503:1
so has part: feature:1551946-1551994:1:exon
so has part: feature:1555115-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557503:1:exon

XP_038624534.1
type: Protein
SIO_000068: ncbiprotein

position:1551946:1
position: 1551946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557503:1
position: 1557503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1551946-1551994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555115-1555197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556424-1556526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556633-1556748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1556862-1556937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557070-1557259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1557413-1557503:1:exon

CSNK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CSNK2B
product: casein kinase 2 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768607.1
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1554925..1554958,1555115..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557655)
location: region:1554925-1557655:1
so has part: feature:1554925-1554958:1:exon
so has part: feature:1555115-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557655:1:exon

position:1554925:1
position: 1554925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554925-1554958:1:exon

position:1554958:1
position: 1554958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555115-1555197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556424-1556526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556633-1556748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1556862-1556937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557070-1557259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1557413-1557655:1:exon

CSNK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CSNK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit beta isoform X2
translation: MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQAASNFKSPVKTIR
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1555126..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557503)
location: region:1555126-1557503:1
so has part: feature:1555126-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557503:1:exon

XP_038624535.1
type: Protein
SIO_000068: ncbiprotein

position:1555126:1
position: 1555126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555126-1555197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556424-1556526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556633-1556748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556862-1556937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1557070-1557259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557413-1557503:1:exon

CSNK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CSNK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit beta isoform X2
translation: MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQAASNFKSPVKTIR
SIO_010081: CSNK2B
subclass of: SO_0000673
so part of: CSNK2B
location: join(1555126..1555197,1556424..1556526,1556633..1556748,1556862..1556937,1557070..1557259,1557413..1557503)
location: region:1555126-1557503:1
so has part: feature:1555126-1555197:1:exon
so has part: feature:1556424-1556526:1:exon
so has part: feature:1556633-1556748:1:exon
so has part: feature:1556862-1556937:1:exon
so has part: feature:1557070-1557259:1:exon
so has part: feature:1557413-1557503:1:exon

XP_038624536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555126-1555197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556424-1556526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556633-1556748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556862-1556937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1557070-1557259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557413-1557503:1:exon

ABHD16A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ABHD16A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1566752..1582019)
location: region:1566752-1582019:-1
so has part: feature:1566752-1582019:-1:exon
subclass of: SO_0000010

119947043
type: Gene
SIO_000068: ncbigene

position:1566752:-1
position: 1566752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582019:-1
position: 1582019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566752-1582019:-1:exon

ABHD16A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABHD16A
product: abhydrolase domain containing 16A, phospholipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768532.1
SIO_010081: ABHD16A
subclass of: SO_0000673
so part of: ABHD16A
location: complement(join(1566752..1567008,1567691..1567737,1567879..1567977,1569232..1569308,1569415..1569477,1569582..1569638,1569734..1569797,1570131..1570235,1570672..1570795,1571460..1571509,1572024..1572087,1572761..1572862,1572990..1573104,1574214..1574336,1574452..1574525,1575967..1576052,1576470..1576556,1577536..1577602,1578899..1578955,1581871..1582019))
location: region:1566752-1582019:-1
so has part: feature:1581871-1582019:-1:exon
so has part: feature:1578899-1578955:-1:exon
so has part: feature:1577536-1577602:-1:exon
so has part: feature:1576470-1576556:-1:exon
so has part: feature:1575967-1576052:-1:exon
so has part: feature:1574452-1574525:-1:exon
so has part: feature:1574214-1574336:-1:exon
so has part: feature:1572990-1573104:-1:exon
so has part: feature:1572761-1572862:-1:exon
so has part: feature:1572024-1572087:-1:exon
so has part: feature:1571460-1571509:-1:exon
so has part: feature:1570672-1570795:-1:exon
so has part: feature:1570131-1570235:-1:exon
so has part: feature:1569734-1569797:-1:exon
so has part: feature:1569582-1569638:-1:exon
so has part: feature:1569415-1569477:-1:exon
so has part: feature:1569232-1569308:-1:exon
so has part: feature:1567879-1567977:-1:exon
so has part: feature:1567691-1567737:-1:exon
so has part: feature:1566752-1567008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1581871-1582019:-1:exon

position:1581871:-1
position: 1581871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578899-1578955:-1:exon

position:1578899:-1
position: 1578899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578955:-1
position: 1578955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1577536-1577602:-1:exon

position:1577536:-1
position: 1577536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577602:-1
position: 1577602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1576470-1576556:-1:exon

position:1576470:-1
position: 1576470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576556:-1
position: 1576556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1575967-1576052:-1:exon

position:1575967:-1
position: 1575967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576052:-1
position: 1576052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1574452-1574525:-1:exon

position:1574452:-1
position: 1574452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574525:-1
position: 1574525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1574214-1574336:-1:exon

position:1574214:-1
position: 1574214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574336:-1
position: 1574336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1572990-1573104:-1:exon

position:1572990:-1
position: 1572990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573104:-1
position: 1573104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1572761-1572862:-1:exon

position:1572761:-1
position: 1572761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572862:-1
position: 1572862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1572024-1572087:-1:exon

position:1572024:-1
position: 1572024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572087:-1
position: 1572087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1571460-1571509:-1:exon

position:1571460:-1
position: 1571460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571509:-1
position: 1571509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1570672-1570795:-1:exon

position:1570672:-1
position: 1570672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570795:-1
position: 1570795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1570131-1570235:-1:exon

position:1570131:-1
position: 1570131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570235:-1
position: 1570235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1569734-1569797:-1:exon

position:1569734:-1
position: 1569734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569797:-1
position: 1569797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1569582-1569638:-1:exon

position:1569582:-1
position: 1569582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569638:-1
position: 1569638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1569415-1569477:-1:exon

position:1569415:-1
position: 1569415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569477:-1
position: 1569477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1569232-1569308:-1:exon

position:1569232:-1
position: 1569232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569308:-1
position: 1569308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1567879-1567977:-1:exon

position:1567879:-1
position: 1567879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567977:-1
position: 1567977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1567691-1567737:-1:exon

position:1567691:-1
position: 1567691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567737:-1
position: 1567737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1566752-1567008:-1:exon

position:1567008:-1
position: 1567008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD16A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABHD16A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine lipase ABHD16A
translation: MAKLLSCVLGPRLYRVYRERDPARPPNTGPGGPPPLPTARAGSWESYYQPRALEKHADSILALASVLWSISYYSSPLAFFYLYRKGYLSMSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPHYIQFITVLEDAHRTGTPESKKRLSSYNFDFRSWPIDFHWQEPGTRKDAQSGPSRQGVALLRPEPLHRGAADGVLDRIKKLPCQVASYLVAHSLGRRMLYPGSVYLLQKALMPALLQGQAHLVEECNGQRAKLVACDGNEIDTMFVDRRGPLEARGQKLVICCEGNAGFYEVGCVCTPLEAGYSVLGWNHPGFAGSTGVPFPQNEANAMDVVLQYAIHRLGFQPKDIILYAWSIGGFTATWASMSYPELSALVLDASFDDLVPLALKVMPNSWRGLVTRTVRQHLNLNNAEQLCRYQGPVLLIRRTKDEIITTTVPDDIASNRGNNLLLRLLQHRYPRVMGEDGLHAVHQWLDAGSVLEEASVYSQAEVDEEWCLSVLRSYQAEHGSDFPWTVGDDLSSDGRRQLALFLARKHLHNFEATHCTPLPSHEFQLPWHL
SIO_010081: ABHD16A
subclass of: SO_0000673
so part of: ABHD16A
location: complement(join(1566925..1567008,1567691..1567737,1567879..1567977,1569232..1569308,1569415..1569477,1569582..1569638,1569734..1569797,1570131..1570235,1570672..1570795,1571460..1571509,1572024..1572087,1572761..1572862,1572990..1573104,1574214..1574336,1574452..1574525,1575967..1576052,1576470..1576556,1577536..1577602,1578899..1578955,1581871..1582002))
location: region:1566925-1582002:-1
so has part: feature:1581871-1582002:-1:exon
so has part: feature:1578899-1578955:-1:exon
so has part: feature:1577536-1577602:-1:exon
so has part: feature:1576470-1576556:-1:exon
so has part: feature:1575967-1576052:-1:exon
so has part: feature:1574452-1574525:-1:exon
so has part: feature:1574214-1574336:-1:exon
so has part: feature:1572990-1573104:-1:exon
so has part: feature:1572761-1572862:-1:exon
so has part: feature:1572024-1572087:-1:exon
so has part: feature:1571460-1571509:-1:exon
so has part: feature:1570672-1570795:-1:exon
so has part: feature:1570131-1570235:-1:exon
so has part: feature:1569734-1569797:-1:exon
so has part: feature:1569582-1569638:-1:exon
so has part: feature:1569415-1569477:-1:exon
so has part: feature:1569232-1569308:-1:exon
so has part: feature:1567879-1567977:-1:exon
so has part: feature:1567691-1567737:-1:exon
so has part: feature:1566925-1567008:-1:exon

XP_038624460.1
type: Protein
SIO_000068: ncbiprotein

position:1566925:-1
position: 1566925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582002:-1
position: 1582002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581871-1582002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1578899-1578955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1577536-1577602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1576470-1576556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1575967-1576052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1574452-1574525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1574214-1574336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1572990-1573104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572761-1572862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1572024-1572087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1571460-1571509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570672-1570795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1570131-1570235:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1569734-1569797:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1569582-1569638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1569415-1569477:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1569232-1569308:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1567879-1567977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1567691-1567737:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1566925-1567008:-1:exon

LOC119946757
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119946757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1583979..1592272
location: region:1583979-1592272:1
so has part: feature:1583979-1592272:1:exon
subclass of: SO_0000010

119946757
type: Gene
SIO_000068: ncbigene

position:1583979:1
position: 1583979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592272:1
position: 1592272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583979-1592272:1:exon

LOC119946757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119946757
product: lymphocyte antigen 6 complex locus protein G6f-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038768205.1
SIO_010081: LOC119946757
subclass of: SO_0000673
so part of: LOC119946757
location: join(1583979..1584000,1585649..1585972,1587220..1587483,1590594..1590752,1591565..1591631,1592241..1592272)
location: region:1583979-1592272:1
so has part: feature:1583979-1584000:1:exon
so has part: feature:1585649-1585972:1:exon
so has part: feature:1587220-1587483:1:exon
so has part: feature:1590594-1590752:1:exon
so has part: feature:1591565-1591631:1:exon
so has part: feature:1592241-1592272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583979-1584000:1:exon

position:1584000:1
position: 1584000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1585649-1585972:1:exon

position:1585649:1
position: 1585649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585972:1
position: 1585972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1587220-1587483:1:exon

position:1587220:1
position: 1587220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587483:1
position: 1587483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1590594-1590752:1:exon

position:1590594:1
position: 1590594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590752:1
position: 1590752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1591565-1591631:1:exon

position:1591565:1
position: 1591565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591631:1
position: 1591631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1592241-1592272:1:exon

position:1592241:1
position: 1592241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119946757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119946757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte antigen 6 complex locus protein G6f-like
translation: MSVNGPDQIQRIYIIQGDSAELACPAPDPLDGDEQLSWFHNLLANRTTRTVVRVPVAGGAPVMGEGVGTRLRLQRNHSLRLDGVREGDAGRYWCSVRGSAWDYQNWKMYDVTVLKGTQMTVHTGAGAPCSIFICSVASALPLDSMSWHEGSGRVKGRTQVFSQVNATLLFLCPREGPGEGRSKKPRNIRCSLNKDQGINFTLPATSGVSSFTHCDSTKGWDFTRILLLLCVLSQVLAILVLGVMVWKRRDRAAQRGGTSTSEFKPEIQVYENIHSSMACPSAAKAM
SIO_010081: LOC119946757
subclass of: SO_0000673
so part of: LOC119946757
location: join(1583979..1584000,1585649..1585972,1587220..1587483,1590594..1590752,1591565..1591631,1592241..1592265)
location: region:1583979-1592265:1
so has part: feature:1583979-1584000:1:exon
so has part: feature:1585649-1585972:1:exon
so has part: feature:1587220-1587483:1:exon
so has part: feature:1590594-1590752:1:exon
so has part: feature:1591565-1591631:1:exon
so has part: feature:1592241-1592265:1:exon

XP_038624133.1
type: Protein
SIO_000068: ncbiprotein

position:1592265:1
position: 1592265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583979-1584000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1585649-1585972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1587220-1587483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1590594-1590752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591565-1591631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1592241-1592265:1:exon

LY6G6C
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LY6G6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1602861..1607692)
location: region:1602861-1607692:-1
so has part: feature:1602861-1607692:-1:exon
subclass of: SO_0000010

119947309
type: Gene
SIO_000068: ncbigene

position:1602861:-1
position: 1602861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607692:-1
position: 1607692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602861-1607692:-1:exon

LY6G6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LY6G6C
product: lymphocyte antigen 6 family member G6C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768937.1
SIO_010081: LY6G6C
subclass of: SO_0000673
so part of: LY6G6C
location: complement(join(1602861..1603301,1604050..1604160,1607516..1607692))
location: region:1602861-1607692:-1
so has part: feature:1607516-1607692:-1:exon
so has part: feature:1604050-1604160:-1:exon
so has part: feature:1602861-1603301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1607516-1607692:-1:exon

position:1607516:-1
position: 1607516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1604050-1604160:-1:exon

position:1604050:-1
position: 1604050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604160:-1
position: 1604160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1602861-1603301:-1:exon

position:1603301:-1
position: 1603301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LY6G6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LY6G6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte antigen 6 complex locus protein G6c
translation: MNPLMLLALSALVFGVSADIRCNSCDKVPVIGCLHWKSCLLKSGQQCLTTNVYLGKMWLYSRLRCGTEEEPCVTAVNKTDRTLGLNYNTTCCNSDSCNSAAPPLRQPLPLAWLAAVGALGLWLFH
SIO_010081: LY6G6C
subclass of: SO_0000673
so part of: LY6G6C
location: complement(join(1603087..1603301,1604050..1604160,1607516..1607567))
location: region:1603087-1607567:-1
so has part: feature:1607516-1607567:-1:exon
so has part: feature:1604050-1604160:-1:exon
so has part: feature:1603087-1603301:-1:exon

XP_038624865.1
type: Protein
SIO_000068: ncbiprotein

position:1603087:-1
position: 1603087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607567:-1
position: 1607567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1607516-1607567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1604050-1604160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1603087-1603301:-1:exon

MPIG6B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MPIG6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1612041..1614711
location: region:1612041-1614711:1
so has part: feature:1612041-1614711:1:exon
subclass of: SO_0000010

119946758
type: Gene
SIO_000068: ncbigene

position:1612041:1
position: 1612041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614711:1
position: 1614711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612041-1614711:1:exon

MPIG6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MPIG6B
product: megakaryocyte and platelet inhibitory receptor G6b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038768206.1
SIO_010081: MPIG6B
subclass of: SO_0000673
so part of: MPIG6B
location: join(1612041..1612588,1613961..1614049,1614397..1614479,1614637..1614711)
location: region:1612041-1614711:1
so has part: feature:1612041-1612588:1:exon
so has part: feature:1613961-1614049:1:exon
so has part: feature:1614397-1614479:1:exon
so has part: feature:1614637-1614711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1612041-1612588:1:exon

position:1612588:1
position: 1612588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613961-1614049:1:exon

position:1613961:1
position: 1613961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614049:1
position: 1614049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1614397-1614479:1:exon

position:1614397:1
position: 1614397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614479:1
position: 1614479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1614637-1614711:1:exon

position:1614637:1
position: 1614637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPIG6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MPIG6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: megakaryocyte and platelet inhibitory receptor G6b
translation: MEATVGLLWLLTLGEAWGSGPTGSAGWGRGEGPLLLANVREKIRLSCDGILRPLRWAWAPRFPNCGSRVSPGRRSVLGPAVAPSSRLPFLQRLRALPPGIRELELTVARGDSGTFYCIGEPRDTESRVRVTVREDLAACLPQRAPARPPPTASPVPPGQLYPPLAAGLVLGLAGLGLAWKLRRGGRGSEPWGVAELLRRGLYIRGIGERVKQGLVPGEAKTLPPAPEEPILERGDSDLDKLDHAPRWNPRRQSPDTPTIYAVVV
SIO_010081: MPIG6B
subclass of: SO_0000673
so part of: MPIG6B
location: join(1612041..1612588,1613961..1614049,1614397..1614479,1614637..1614711)
location: region:1612041-1614711:1
so has part: feature:1612041-1612588:1:exon
so has part: feature:1613961-1614049:1:exon
so has part: feature:1614397-1614479:1:exon
so has part: feature:1614637-1614711:1:exon

XP_038624134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612041-1612588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613961-1614049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614397-1614479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1614637-1614711:1:exon

DDAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DDAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1615744..1621568)
location: region:1615744-1621568:-1
so has part: feature:1615744-1621568:-1:exon
subclass of: SO_0000010

119947210
type: Gene
SIO_000068: ncbigene

position:1615744:-1
position: 1615744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621568:-1
position: 1621568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1615744-1621568:-1:exon

DDAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DDAH2
product: dimethylarginine dimethylaminohydrolase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038768807.1
SIO_010081: DDAH2
subclass of: SO_0000673
so part of: DDAH2
location: complement(join(1615744..1615862,1616760..1616909,1617112..1617232,1617409..1617482,1618879..1618978,1619316..1619717,1621515..1621568))
location: region:1615744-1621568:-1
so has part: feature:1621515-1621568:-1:exon
so has part: feature:1619316-1619717:-1:exon
so has part: feature:1618879-1618978:-1:exon
so has part: feature:1617409-1617482:-1:exon
so has part: feature:1617112-1617232:-1:exon
so has part: feature:1616760-1616909:-1:exon
so has part: feature:1615744-1615862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1621515-1621568:-1:exon

position:1621515:-1
position: 1621515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619316-1619717:-1:exon

position:1619316:-1
position: 1619316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619717:-1
position: 1619717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1618879-1618978:-1:exon

position:1618879:-1
position: 1618879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618978:-1
position: 1618978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1617409-1617482:-1:exon

position:1617409:-1
position: 1617409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617482:-1
position: 1617482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617112-1617232:-1:exon

position:1617112:-1
position: 1617112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617232:-1
position: 1617232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1616760-1616909:-1:exon

position:1616760:-1
position: 1616760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616909:-1
position: 1616909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1615744-1615862:-1:exon

position:1615862:-1
position: 1615862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DDAH2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: N(G),N(G)-dimethylarginine dimethylaminohydrolase 2
translation: MGTPGEGLGRYSHALIRGVPAALGEEGAREGPVLDLAKAQREHGVLGGKLRQRLGLQLLELPPEEGLPLCPLLGDTAIIQGDTALLTRPWSPARRLEIDGVRKVLQDLGLRIMEVGDENATLDGTDVLFTGREFFVGLSKWTNHQGAEIVADTFRDFAVSTVPVSGSGHLRGLCGMGGPRTVVAGSSEAAQRAVRAMASLTDHPYASLTLPDDAAADCLFLRPGPAGAPPFLLHRGGGDLPNSQEALQKLPDVTLVPVSCTELEKAGAGLSSLCLVLSTRPHS
SIO_010081: DDAH2
subclass of: SO_0000673
so part of: DDAH2
location: complement(join(1615746..1615862,1616760..1616909,1617112..1617232,1617409..1617482,1618879..1618978,1619316..1619606))
location: region:1615746-1619606:-1
so has part: feature:1619316-1619606:-1:exon
so has part: feature:1618879-1618978:-1:exon
so has part: feature:1617409-1617482:-1:exon
so has part: feature:1617112-1617232:-1:exon
so has part: feature:1616760-1616909:-1:exon
so has part: feature:1615746-1615862:-1:exon

XP_038624735.1
type: Protein
SIO_000068: ncbiprotein

position:1615746:-1
position: 1615746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619606:-1
position: 1619606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619316-1619606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1618879-1618978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1617409-1617482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617112-1617232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616760-1616909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1615746-1615862:-1:exon

CLIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CLIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1627838..1642729)
location: region:1627838-1642729:-1
so has part: feature:1627838-1642729:-1:exon
subclass of: SO_0000010

119947117
type: Gene
SIO_000068: ncbigene

position:1627838:-1
position: 1627838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642729:-1
position: 1642729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627838-1642729:-1:exon

CLIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CLIC1
product: chloride intracellular channel 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038768656.1
SIO_010081: CLIC1
subclass of: SO_0000673
so part of: CLIC1
location: complement(join(1627838..1628302,1632154..1632335,1634135..1634241,1635869..1635994,1636539..1636648,1642672..1642729))
location: region:1627838-1642729:-1
so has part: feature:1642672-1642729:-1:exon
so has part: feature:1636539-1636648:-1:exon
so has part: feature:1635869-1635994:-1:exon
so has part: feature:1634135-1634241:-1:exon
so has part: feature:1632154-1632335:-1:exon
so has part: feature:1627838-1628302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642672-1642729:-1:exon

position:1642672:-1
position: 1642672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1636539-1636648:-1:exon

position:1636539:-1
position: 1636539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636648:-1
position: 1636648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1635869-1635994:-1:exon

position:1635869:-1
position: 1635869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635994:-1
position: 1635994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1634135-1634241:-1:exon

position:1634135:-1
position: 1634135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634241:-1
position: 1634241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1632154-1632335:-1:exon

position:1632154:-1
position: 1632154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632335:-1
position: 1632335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1627838-1628302:-1:exon

position:1628302:-1
position: 1628302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CLIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 1
translation: MAEEQALVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLSPPRYPKLAAKNPESNTAGLDVFAKFSAYIKNSNPALNANLEKGLLKALKILDIYLTSPLPEEVDETSAEDEGISQRKFLDGDELTLADCNLLPKLHIVKVVCKKYRGFSIPEEFRGVQRYLKNAYAREEFASTCPDEEEIELAYELVAKALK
SIO_010081: CLIC1
subclass of: SO_0000673
so part of: CLIC1
location: complement(join(1628141..1628302,1632154..1632335,1634135..1634241,1635869..1635994,1636539..1636648,1642672..1642710))
location: region:1628141-1642710:-1
so has part: feature:1642672-1642710:-1:exon
so has part: feature:1636539-1636648:-1:exon
so has part: feature:1635869-1635994:-1:exon
so has part: feature:1634135-1634241:-1:exon
so has part: feature:1632154-1632335:-1:exon
so has part: feature:1628141-1628302:-1:exon

XP_038624584.1
type: Protein
SIO_000068: ncbiprotein

position:1628141:-1
position: 1628141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642710:-1
position: 1642710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642672-1642710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1636539-1636648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1635869-1635994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1634135-1634241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1632154-1632335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1628141-1628302:-1:exon

MSH5
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MSH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1653889..1673720
location: region:1653889-1673720:1
so has part: feature:1653889-1673720:1:exon
subclass of: SO_0000010

119947069
type: Gene
SIO_000068: ncbigene

position:1653889:1
position: 1653889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673720:1
position: 1673720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653889-1673720:1:exon

MSH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MSH5
product: mutS homolog 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768575.1
SIO_010081: MSH5
subclass of: SO_0000673
so part of: MSH5
location: join(1653889..1653936,1655749..1655898,1656118..1656241,1657129..1657209,1657535..1657606,1657807..1657928,1658201..1658310,1658887..1658922,1661236..1661318,1662038..1662083,1663133..1663271,1664839..1664901,1666367..1666495,1667662..1667734,1667937..1668046,1668240..1668320,1668454..1668541,1670558..1670744,1670817..1670943,1671334..1671483,1671697..1671771,1671861..1672004,1672342..1672479,1672601..1672674,1672769..1673720)
location: region:1653889-1673720:1
so has part: feature:1653889-1653936:1:exon
so has part: feature:1655749-1655898:1:exon
so has part: feature:1656118-1656241:1:exon
so has part: feature:1657129-1657209:1:exon
so has part: feature:1657535-1657606:1:exon
so has part: feature:1657807-1657928:1:exon
so has part: feature:1658201-1658310:1:exon
so has part: feature:1658887-1658922:1:exon
so has part: feature:1661236-1661318:1:exon
so has part: feature:1662038-1662083:1:exon
so has part: feature:1663133-1663271:1:exon
so has part: feature:1664839-1664901:1:exon
so has part: feature:1666367-1666495:1:exon
so has part: feature:1667662-1667734:1:exon
so has part: feature:1667937-1668046:1:exon
so has part: feature:1668240-1668320:1:exon
so has part: feature:1668454-1668541:1:exon
so has part: feature:1670558-1670744:1:exon
so has part: feature:1670817-1670943:1:exon
so has part: feature:1671334-1671483:1:exon
so has part: feature:1671697-1671771:1:exon
so has part: feature:1671861-1672004:1:exon
so has part: feature:1672342-1672479:1:exon
so has part: feature:1672601-1672674:1:exon
so has part: feature:1672769-1673720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1653889-1653936:1:exon

position:1653936:1
position: 1653936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1655749-1655898:1:exon

position:1655749:1
position: 1655749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655898:1
position: 1655898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1656118-1656241:1:exon

position:1656118:1
position: 1656118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656241:1
position: 1656241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1657129-1657209:1:exon

position:1657129:1
position: 1657129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657209:1
position: 1657209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1657535-1657606:1:exon

position:1657535:1
position: 1657535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657606:1
position: 1657606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1657807-1657928:1:exon

position:1657807:1
position: 1657807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657928:1
position: 1657928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1658201-1658310:1:exon

position:1658201:1
position: 1658201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658310:1
position: 1658310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1658887-1658922:1:exon

position:1658887:1
position: 1658887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658922:1
position: 1658922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1661236-1661318:1:exon

position:1661236:1
position: 1661236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661318:1
position: 1661318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1662038-1662083:1:exon

position:1662038:1
position: 1662038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662083:1
position: 1662083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1663133-1663271:1:exon

position:1663133:1
position: 1663133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663271:1
position: 1663271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1664839-1664901:1:exon

position:1664839:1
position: 1664839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664901:1
position: 1664901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1666367-1666495:1:exon

position:1666367:1
position: 1666367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666495:1
position: 1666495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1667662-1667734:1:exon

position:1667662:1
position: 1667662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667734:1
position: 1667734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1667937-1668046:1:exon

position:1667937:1
position: 1667937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668046:1
position: 1668046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1668240-1668320:1:exon

position:1668240:1
position: 1668240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668320:1
position: 1668320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1668454-1668541:1:exon

position:1668454:1
position: 1668454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668541:1
position: 1668541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1670558-1670744:1:exon

position:1670558:1
position: 1670558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670744:1
position: 1670744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1670817-1670943:1:exon

position:1670817:1
position: 1670817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670943:1
position: 1670943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1671334-1671483:1:exon

position:1671334:1
position: 1671334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671483:1
position: 1671483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1671697-1671771:1:exon

position:1671697:1
position: 1671697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671771:1
position: 1671771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1671861-1672004:1:exon

position:1671861:1
position: 1671861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672004:1
position: 1672004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1672342-1672479:1:exon

position:1672342:1
position: 1672342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672479:1
position: 1672479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1672601-1672674:1:exon

position:1672601:1
position: 1672601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672674:1
position: 1672674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1672769-1673720:1:exon

position:1672769:1
position: 1672769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MSH5
product: mutS homolog 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768576.1
SIO_010081: MSH5
subclass of: SO_0000673
so part of: MSH5
location: join(1653889..1653936,1655749..1655898,1656118..1656241,1657129..1657209,1657535..1657606,1657807..1657928,1658201..1658310,1658887..1658922,1661236..1661318,1662038..1662083,1663133..1663271,1664839..1664901,1667662..1667734,1667937..1668046,1668240..1668320,1668454..1668541,1670558..1670744,1670817..1670943,1671334..1671483,1671697..1671771,1671861..1672004,1672342..1672479,1672601..1672674,1672769..1673720)
location: region:1653889-1673720:1
so has part: feature:1653889-1653936:1:exon
so has part: feature:1655749-1655898:1:exon
so has part: feature:1656118-1656241:1:exon
so has part: feature:1657129-1657209:1:exon
so has part: feature:1657535-1657606:1:exon
so has part: feature:1657807-1657928:1:exon
so has part: feature:1658201-1658310:1:exon
so has part: feature:1658887-1658922:1:exon
so has part: feature:1661236-1661318:1:exon
so has part: feature:1662038-1662083:1:exon
so has part: feature:1663133-1663271:1:exon
so has part: feature:1664839-1664901:1:exon
so has part: feature:1667662-1667734:1:exon
so has part: feature:1667937-1668046:1:exon
so has part: feature:1668240-1668320:1:exon
so has part: feature:1668454-1668541:1:exon
so has part: feature:1670558-1670744:1:exon
so has part: feature:1670817-1670943:1:exon
so has part: feature:1671334-1671483:1:exon
so has part: feature:1671697-1671771:1:exon
so has part: feature:1671861-1672004:1:exon
so has part: feature:1672342-1672479:1:exon
so has part: feature:1672601-1672674:1:exon
so has part: feature:1672769-1673720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1653889-1653936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1655749-1655898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1656118-1656241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1657129-1657209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1657535-1657606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657807-1657928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658201-1658310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658887-1658922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1661236-1661318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662038-1662083:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1663133-1663271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1664839-1664901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667662-1667734:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667937-1668046:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1668240-1668320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1668454-1668541:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670558-1670744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1670817-1670943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671334-1671483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1671697-1671771:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1671861-1672004:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1672342-1672479:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1672601-1672674:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1672769-1673720:1:exon

MSH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MSH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mutS protein homolog 5 isoform X1
translation: MTEMEAGRISDNMTSLGMASRSPQGQVAGMIPTDPQISPSMQGHFGQEEEEETAETHLSVVWHAGHLGIAYYDTGDSIIYFMPDAPDHENLRLLQRVVDEIGPRSIVTSMKRDENMTRFLEGLASAGSGNNEVMGRPEVVLFPSVDFGLEISKQRLLSGSFSFITEPMSPTEKILFLSSIMPFDCPLTVRALGGLLKFLDQKRIGVELEESSVAVPILGFKKFVLTNLVSVDQDTYCVLQIFKSEAHPSVYKLATGLKEGLSLFGLLNRCRCKWGEKQLRLWLMRPTRDLSELNARLDVIQFFLQPRNLETAQALHGLLGNIKNVPLILRRMTLSHTKASDWQVLYKTVYSALGLRDTCRALPGSIRLFRDVAQEFTDDLHHIARLISKVVDFEGSLAENRFIVRPSVDPAIDEKKRRLMGLSDFLTEVARKELETLDHRVPSCSVLYIPLIGFLLSIPRLPFMVDQSDFEIEGLDFMFLSEEKLHYRSARTKELDGMLGDLHCEIRDQEMLLMHELQCQVLSRGATLGRVLDLAAQLDALLALAGAARDHGYSRPRYSNHGGVRIKDGRHPLMELCARTFVPNSVESGGDLGRVKVLTGPNSSGKSIYLKQVGLITFMALVGSFVPAAEALIGPVDAVFTRMHSRESVSLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKGTNAVDGLALLAAVLRHWVAQGPTCPQVFVATNFLSLVQLQLLPPKPLVHYLTMETCEDGEDLVFFYQVREGVAGASHASRTAALAGLPANLIARGKEVSELICSGKPIRPLNPPTKEDQMDKCQALVDKFLTLDLDDPDLDPSVFLSQEVLPVASSIL
SIO_010081: MSH5
subclass of: SO_0000673
so part of: MSH5
location: join(1653922..1653936,1655749..1655898,1656118..1656241,1657129..1657209,1657535..1657606,1657807..1657928,1658201..1658310,1658887..1658922,1661236..1661318,1662038..1662083,1663133..1663271,1664839..1664901,1666367..1666495,1667662..1667734,1667937..1668046,1668240..1668320,1668454..1668541,1670558..1670744,1670817..1670943,1671334..1671483,1671697..1671771,1671861..1672004,1672342..1672479,1672601..1672674,1672769..1672880)
location: region:1653922-1672880:1
so has part: feature:1653922-1653936:1:exon
so has part: feature:1655749-1655898:1:exon
so has part: feature:1656118-1656241:1:exon
so has part: feature:1657129-1657209:1:exon
so has part: feature:1657535-1657606:1:exon
so has part: feature:1657807-1657928:1:exon
so has part: feature:1658201-1658310:1:exon
so has part: feature:1658887-1658922:1:exon
so has part: feature:1661236-1661318:1:exon
so has part: feature:1662038-1662083:1:exon
so has part: feature:1663133-1663271:1:exon
so has part: feature:1664839-1664901:1:exon
so has part: feature:1666367-1666495:1:exon
so has part: feature:1667662-1667734:1:exon
so has part: feature:1667937-1668046:1:exon
so has part: feature:1668240-1668320:1:exon
so has part: feature:1668454-1668541:1:exon
so has part: feature:1670558-1670744:1:exon
so has part: feature:1670817-1670943:1:exon
so has part: feature:1671334-1671483:1:exon
so has part: feature:1671697-1671771:1:exon
so has part: feature:1671861-1672004:1:exon
so has part: feature:1672342-1672479:1:exon
so has part: feature:1672601-1672674:1:exon
so has part: feature:1672769-1672880:1:exon

XP_038624503.1
type: Protein
SIO_000068: ncbiprotein

position:1653922:1
position: 1653922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672880:1
position: 1672880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653922-1653936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1655749-1655898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1656118-1656241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1657129-1657209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1657535-1657606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657807-1657928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658201-1658310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658887-1658922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1661236-1661318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662038-1662083:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1663133-1663271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1664839-1664901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1666367-1666495:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667662-1667734:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1667937-1668046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1668240-1668320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1668454-1668541:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1670558-1670744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1670817-1670943:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1671334-1671483:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1671697-1671771:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1671861-1672004:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1672342-1672479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1672601-1672674:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1672769-1672880:1:exon

MSH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MSH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mutS protein homolog 5 isoform X2
translation: MTEMEAGRISDNMTSLGMASRSPQGQVAGMIPTDPQISPSMQGHFGQEEEEETAETHLSVVWHAGHLGIAYYDTGDSIIYFMPDAPDHENLRLLQRVVDEIGPRSIVTSMKRDENMTRFLEGLASAGSGNNEVMGRPEVVLFPSVDFGLEISKQRLLSGSFSFITEPMSPTEKILFLSSIMPFDCPLTVRALGGLLKFLDQKRIGVELEESSVAVPILGFKKFVLTNLVSVDQDTYCVLQIFKSEAHPSVYKLATGLKEGLSLFGLLNRCRCKWGEKQLRLWLMRPTRDLSELNARLDVIQFFLQPRNLETAQALHGLLGNIKNVPLILRRMTLSHTKASDWQVLYKVDFEGSLAENRFIVRPSVDPAIDEKKRRLMGLSDFLTEVARKELETLDHRVPSCSVLYIPLIGFLLSIPRLPFMVDQSDFEIEGLDFMFLSEEKLHYRSARTKELDGMLGDLHCEIRDQEMLLMHELQCQVLSRGATLGRVLDLAAQLDALLALAGAARDHGYSRPRYSNHGGVRIKDGRHPLMELCARTFVPNSVESGGDLGRVKVLTGPNSSGKSIYLKQVGLITFMALVGSFVPAAEALIGPVDAVFTRMHSRESVSLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKGTNAVDGLALLAAVLRHWVAQGPTCPQVFVATNFLSLVQLQLLPPKPLVHYLTMETCEDGEDLVFFYQVREGVAGASHASRTAALAGLPANLIARGKEVSELICSGKPIRPLNPPTKEDQMDKCQALVDKFLTLDLDDPDLDPSVFLSQEVLPVASSIL
SIO_010081: MSH5
subclass of: SO_0000673
so part of: MSH5
location: join(1653922..1653936,1655749..1655898,1656118..1656241,1657129..1657209,1657535..1657606,1657807..1657928,1658201..1658310,1658887..1658922,1661236..1661318,1662038..1662083,1663133..1663271,1664839..1664901,1667662..1667734,1667937..1668046,1668240..1668320,1668454..1668541,1670558..1670744,1670817..1670943,1671334..1671483,1671697..1671771,1671861..1672004,1672342..1672479,1672601..1672674,1672769..1672880)
location: region:1653922-1672880:1
so has part: feature:1653922-1653936:1:exon
so has part: feature:1655749-1655898:1:exon
so has part: feature:1656118-1656241:1:exon
so has part: feature:1657129-1657209:1:exon
so has part: feature:1657535-1657606:1:exon
so has part: feature:1657807-1657928:1:exon
so has part: feature:1658201-1658310:1:exon
so has part: feature:1658887-1658922:1:exon
so has part: feature:1661236-1661318:1:exon
so has part: feature:1662038-1662083:1:exon
so has part: feature:1663133-1663271:1:exon
so has part: feature:1664839-1664901:1:exon
so has part: feature:1667662-1667734:1:exon
so has part: feature:1667937-1668046:1:exon
so has part: feature:1668240-1668320:1:exon
so has part: feature:1668454-1668541:1:exon
so has part: feature:1670558-1670744:1:exon
so has part: feature:1670817-1670943:1:exon
so has part: feature:1671334-1671483:1:exon
so has part: feature:1671697-1671771:1:exon
so has part: feature:1671861-1672004:1:exon
so has part: feature:1672342-1672479:1:exon
so has part: feature:1672601-1672674:1:exon
so has part: feature:1672769-1672880:1:exon

XP_038624504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1653922-1653936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1655749-1655898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1656118-1656241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1657129-1657209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1657535-1657606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657807-1657928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658201-1658310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658887-1658922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1661236-1661318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662038-1662083:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1663133-1663271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1664839-1664901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667662-1667734:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667937-1668046:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1668240-1668320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1668454-1668541:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670558-1670744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1670817-1670943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671334-1671483:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1671697-1671771:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1671861-1672004:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1672342-1672479:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1672601-1672674:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1672769-1672880:1:exon

VWA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: VWA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1673805..1690630)
location: region:1673805-1690630:-1
so has part: feature:1673805-1690630:-1:exon
subclass of: SO_0000010

119946759
type: Gene
SIO_000068: ncbigene

position:1673805:-1
position: 1673805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690630:-1
position: 1690630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673805-1690630:-1:exon

VWA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VWA7
product: von Willebrand factor A domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038768208.1
SIO_010081: VWA7
subclass of: SO_0000673
so part of: VWA7
location: complement(join(1673805..1674020,1674161..1674323,1675506..1675642,1675742..1676025,1677803..1677895,1678007..1678159,1678397..1678538,1678945..1679133,1680790..1680906,1681649..1681761,1683082..1683251,1683366..1683561,1685569..1685679,1686919..1687015,1688157..1688438,1690187..1690630))
location: region:1673805-1690630:-1
so has part: feature:1690187-1690630:-1:exon
so has part: feature:1688157-1688438:-1:exon
so has part: feature:1686919-1687015:-1:exon
so has part: feature:1685569-1685679:-1:exon
so has part: feature:1683366-1683561:-1:exon
so has part: feature:1683082-1683251:-1:exon
so has part: feature:1681649-1681761:-1:exon
so has part: feature:1680790-1680906:-1:exon
so has part: feature:1678945-1679133:-1:exon
so has part: feature:1678397-1678538:-1:exon
so has part: feature:1678007-1678159:-1:exon
so has part: feature:1677803-1677895:-1:exon
so has part: feature:1675742-1676025:-1:exon
so has part: feature:1675506-1675642:-1:exon
so has part: feature:1674161-1674323:-1:exon
so has part: feature:1673805-1674020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1690187-1690630:-1:exon

position:1690187:-1
position: 1690187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1688157-1688438:-1:exon

position:1688157:-1
position: 1688157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688438:-1
position: 1688438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1686919-1687015:-1:exon

position:1686919:-1
position: 1686919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687015:-1
position: 1687015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1685569-1685679:-1:exon

position:1685569:-1
position: 1685569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685679:-1
position: 1685679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1683366-1683561:-1:exon

position:1683366:-1
position: 1683366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683561:-1
position: 1683561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1683082-1683251:-1:exon

position:1683082:-1
position: 1683082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683251:-1
position: 1683251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1681649-1681761:-1:exon

position:1681649:-1
position: 1681649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681761:-1
position: 1681761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1680790-1680906:-1:exon

position:1680790:-1
position: 1680790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680906:-1
position: 1680906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1678945-1679133:-1:exon

position:1678945:-1
position: 1678945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679133:-1
position: 1679133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1678397-1678538:-1:exon

position:1678397:-1
position: 1678397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678538:-1
position: 1678538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1678007-1678159:-1:exon

position:1678007:-1
position: 1678007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678159:-1
position: 1678159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1677803-1677895:-1:exon

position:1677803:-1
position: 1677803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677895:-1
position: 1677895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1675742-1676025:-1:exon

position:1675742:-1
position: 1675742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676025:-1
position: 1676025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1675506-1675642:-1:exon

position:1675506:-1
position: 1675506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675642:-1
position: 1675642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1674161-1674323:-1:exon

position:1674161:-1
position: 1674161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674323:-1
position: 1674323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1673805-1674020:-1:exon

position:1674020:-1
position: 1674020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VWA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VWA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 7
translation: MAGPGFPRALPRLLFLLLLPAGCGGFFPNIWSLVAAPGSVSHQDLTEEAALNVTLQLFLDRPRPGVPPVAAEDFQGRTLLADELFAAYFGAGAPSRRFRAAVAEVSRANAAQDFLAATRLDPVLHFDAERLGPGRTRLLRTLEEVLGAARALAFPLARRRLGALLHALQDFYSHSNWVELGEDGAHPDLLRTRPDLRNLARAGDETCSDCAGLSCPGNLLGSGLLTSGYFGVDPPKPPGKCSHGGQFDQSSSQHPRGGINKDSSSWLFSPHHALHPAAARLAQEASIQALTLLRARLGDGDFSRLLDITPATGLTFVLDTTGSMGEEINAAKVQARSIIDQRRGGPLEPSHYILVPFHDPGFGPVFQTSDPDVFWKHLNELDALGGGDEPEMCLSALELALLHTPPLSDIYVFTDASPKDAHLSNRVEALSQERRCRVTFLVTEDPSRWRARARRELLPPERFDPYVALAAASGGEVIFTQDQHIRDVAGSVVGDGAADVVTLLQVRTLGGPGTPGTPLSFWVDRLVTEVVIRVYGELSGFCLRDPTGVRQTEAEGPGPLARTRRSGQFWAAALLDPPRPGAWGLEVTATGNYSVRVQARTSLDFLFYFGAPVEGGPHPGLYPLSQPVTGLPAVLLVEVAGAKAGPGAPKLSHAVLRGPGGAELGRVALSPAGSPRRDLLSGPLPPTLPAHEPFSLELVGRDGGGQALRRVAPQPLFVAPVLVELSRAGPPGPGPAARLLLCVSSFSGPRELLLTAAADRGFAVRSNLSRVRLGQNETAWGELSLQPPSSVAPDSVVTVTVSVGAGPSPPVHAFLQLLVQPPERDASRGHTSVPEAAASPVHGGPPPEPSVGAGLELGTGLSGAGEAAGRGRGGLLGALVLPGVTLGCLGVHYRM
SIO_010081: VWA7
subclass of: SO_0000673
so part of: VWA7
location: complement(join(1673805..1674020,1674161..1674323,1675506..1675642,1675742..1676025,1677803..1677895,1678007..1678159,1678397..1678538,1678945..1679133,1680790..1680906,1681649..1681761,1683082..1683251,1683366..1683561,1685569..1685679,1686919..1687015,1688157..1688438,1690187..1690411))
location: region:1673805-1690411:-1
so has part: feature:1690187-1690411:-1:exon
so has part: feature:1688157-1688438:-1:exon
so has part: feature:1686919-1687015:-1:exon
so has part: feature:1685569-1685679:-1:exon
so has part: feature:1683366-1683561:-1:exon
so has part: feature:1683082-1683251:-1:exon
so has part: feature:1681649-1681761:-1:exon
so has part: feature:1680790-1680906:-1:exon
so has part: feature:1678945-1679133:-1:exon
so has part: feature:1678397-1678538:-1:exon
so has part: feature:1678007-1678159:-1:exon
so has part: feature:1677803-1677895:-1:exon
so has part: feature:1675742-1676025:-1:exon
so has part: feature:1675506-1675642:-1:exon
so has part: feature:1674161-1674323:-1:exon
so has part: feature:1673805-1674020:-1:exon

XP_038624136.1
type: Protein
SIO_000068: ncbiprotein

position:1690411:-1
position: 1690411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690187-1690411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1688157-1688438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1686919-1687015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685569-1685679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1683366-1683561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683082-1683251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681649-1681761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1680790-1680906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1678945-1679133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1678397-1678538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1678007-1678159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1677803-1677895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1675742-1676025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1675506-1675642:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1674161-1674323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1673805-1674020:-1:exon

VARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: VARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1690922..1702887)
location: region:1690922-1702887:-1
so has part: feature:1690922-1702887:-1:exon
subclass of: SO_0000010

119946861
type: Gene
SIO_000068: ncbigene

position:1690922:-1
position: 1690922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702887:-1
position: 1702887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690922-1702887:-1:exon

VARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VARS1
product: valyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038768339.1
SIO_010081: VARS1
subclass of: SO_0000673
so part of: VARS1
location: complement(join(1690922..1691103,1691952..1692277,1692640..1692751,1692848..1693075,1693244..1693399,1695321..1695448,1695636..1695714,1695808..1695876,1695990..1696094,1696382..1696507,1696615..1696685,1696800..1696905,1697456..1697546,1697654..1697812,1697920..1698023,1698264..1698388,1698605..1698695,1698850..1698944,1699217..1699325,1699483..1699602,1699736..1699817,1700319..1700483,1700854..1700981,1701064..1701164,1701378..1701462,1701595..1701722,1702053..1702209,1702292..1702426,1702524..1702887))
location: region:1690922-1702887:-1
so has part: feature:1702524-1702887:-1:exon
so has part: feature:1702292-1702426:-1:exon
so has part: feature:1702053-1702209:-1:exon
so has part: feature:1701595-1701722:-1:exon
so has part: feature:1701378-1701462:-1:exon
so has part: feature:1701064-1701164:-1:exon
so has part: feature:1700854-1700981:-1:exon
so has part: feature:1700319-1700483:-1:exon
so has part: feature:1699736-1699817:-1:exon
so has part: feature:1699483-1699602:-1:exon
so has part: feature:1699217-1699325:-1:exon
so has part: feature:1698850-1698944:-1:exon
so has part: feature:1698605-1698695:-1:exon
so has part: feature:1698264-1698388:-1:exon
so has part: feature:1697920-1698023:-1:exon
so has part: feature:1697654-1697812:-1:exon
so has part: feature:1697456-1697546:-1:exon
so has part: feature:1696800-1696905:-1:exon
so has part: feature:1696615-1696685:-1:exon
so has part: feature:1696382-1696507:-1:exon
so has part: feature:1695990-1696094:-1:exon
so has part: feature:1695808-1695876:-1:exon
so has part: feature:1695636-1695714:-1:exon
so has part: feature:1695321-1695448:-1:exon
so has part: feature:1693244-1693399:-1:exon
so has part: feature:1692848-1693075:-1:exon
so has part: feature:1692640-1692751:-1:exon
so has part: feature:1691952-1692277:-1:exon
so has part: feature:1690922-1691103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1702524-1702887:-1:exon

position:1702524:-1
position: 1702524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1702292-1702426:-1:exon

position:1702292:-1
position: 1702292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702426:-1
position: 1702426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1702053-1702209:-1:exon

position:1702053:-1
position: 1702053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702209:-1
position: 1702209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1701595-1701722:-1:exon

position:1701595:-1
position: 1701595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701722:-1
position: 1701722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1701378-1701462:-1:exon

position:1701378:-1
position: 1701378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701462:-1
position: 1701462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1701064-1701164:-1:exon

position:1701064:-1
position: 1701064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701164:-1
position: 1701164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1700854-1700981:-1:exon

position:1700854:-1
position: 1700854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700981:-1
position: 1700981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1700319-1700483:-1:exon

position:1700319:-1
position: 1700319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700483:-1
position: 1700483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1699736-1699817:-1:exon

position:1699736:-1
position: 1699736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699817:-1
position: 1699817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1699483-1699602:-1:exon

position:1699483:-1
position: 1699483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699602:-1
position: 1699602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1699217-1699325:-1:exon

position:1699217:-1
position: 1699217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699325:-1
position: 1699325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1698850-1698944:-1:exon

position:1698850:-1
position: 1698850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698944:-1
position: 1698944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1698605-1698695:-1:exon

position:1698605:-1
position: 1698605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698695:-1
position: 1698695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1698264-1698388:-1:exon

position:1698264:-1
position: 1698264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698388:-1
position: 1698388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1697920-1698023:-1:exon

position:1697920:-1
position: 1697920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698023:-1
position: 1698023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1697654-1697812:-1:exon

position:1697654:-1
position: 1697654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697812:-1
position: 1697812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1697456-1697546:-1:exon

position:1697456:-1
position: 1697456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697546:-1
position: 1697546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1696800-1696905:-1:exon

position:1696800:-1
position: 1696800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696905:-1
position: 1696905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1696615-1696685:-1:exon

position:1696615:-1
position: 1696615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696685:-1
position: 1696685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1696382-1696507:-1:exon

position:1696382:-1
position: 1696382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696507:-1
position: 1696507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1695990-1696094:-1:exon

position:1695990:-1
position: 1695990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696094:-1
position: 1696094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1695808-1695876:-1:exon

position:1695808:-1
position: 1695808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695876:-1
position: 1695876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1695636-1695714:-1:exon

position:1695636:-1
position: 1695636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695714:-1
position: 1695714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1695321-1695448:-1:exon

position:1695321:-1
position: 1695321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695448:-1
position: 1695448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1693244-1693399:-1:exon

position:1693244:-1
position: 1693244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693399:-1
position: 1693399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1692848-1693075:-1:exon

position:1692848:-1
position: 1692848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693075:-1
position: 1693075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1692640-1692751:-1:exon

position:1692640:-1
position: 1692640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692751:-1
position: 1692751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1691952-1692277:-1:exon

position:1691952:-1
position: 1691952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692277:-1
position: 1692277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1690922-1691103:-1:exon

position:1691103:-1
position: 1691103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase
translation: MSVLYVSPHPESFPSLQALIAARYGGAEPRVCPRPPPPGPRFPLPGLPALELGPELGVSGGSAVARLLWPGGLGGPGGGRAAALVQQWINYADGELVPAACAAALPALGPARPGGDPQAAMAALGRALAPLEDHLRLRAFLVGEDPTLADLAAATALLLPFKHVLDPKARSSLPNVTRWFLACVRQPQFQAVLGEVGLCPGIRPFPAPLPQPGAGGPQAPAPPKTPAQLKKEAKKREKLEKFQQKQEKNRQQQPPPGEKKPKAEKKEKRDPGVVTYDLPTRPGDKKDVSGPMPDSYSPQYVEAAWYPWWESQGFFKPEYGRSSVAEPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDALTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGLSRHQVGREAFLREVWKWKDEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSRAVTEAFVRLHDTGVIYRSTRLVNWSCSLNSAISDIEVEKKELSGRTLLSVPGYKDKVQFGVLVSFAYKVAGSDSDEEVVVATTRIETMLGDTAVAVHPKDPRYQHLRGKSVLHPFVQRTLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRLEAVTIMDHRGNLINVPPPFLGLPRFEARNMVLEALKERGLFRAIKDNPMVVPFCTRSKDVVEPLLKPQWYVRCGDMARAASAAVARGDLRILPEAHVRTWNAWMDNIRDWCISRQLWWGHRIPAYFVTVDDPSVPPGQDPDGRYWVSGRSEQEAREKAARQFGVAPEKVVLRQDDDVLDTWFSSGIFPLSIFGWPEPTEDLAVFYPGTLLETGHDILFFWVARMVMLGLQLTGRLPFREVYLHAVIRDAHGRKMSKSLGNVIDPLDVISGVSLEGLHAQLANSNLDPAEMERAKAGQKADFPSGIPECGTDALRFGLCAYTAQGRDINLDVSRILGYRHFCNKLWNATKFALRGLGADFRPAPSPQPGGAESLADRWILSRLAEAVEQSHRGFRDYDFPGVTTAQYSFWLYELCDVYLECVKPVLAAGAEDAGTPAEAAAAVVRQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRGPAAPPSLCVTPYPDPDQCSWKDAEAESTFELVLSISRAVRSLRADYNLTHSRPDCFLEVTDEPTRSRAARGCDYVRALASAGSVQLLPPGAAAPPGCAVGLASDRCSVHLLLWGLVDPARELAKLQGRRAEVERGAERLRERRAAPGYAAKVPPQVREADAAKLLQAEAELRTVDQAIAVFQKMV
SIO_010081: VARS1
subclass of: SO_0000673
so part of: VARS1
location: complement(join(1691035..1691103,1691952..1692277,1692640..1692751,1692848..1693075,1693244..1693399,1695321..1695448,1695636..1695714,1695808..1695876,1695990..1696094,1696382..1696507,1696615..1696685,1696800..1696905,1697456..1697546,1697654..1697812,1697920..1698023,1698264..1698388,1698605..1698695,1698850..1698944,1699217..1699325,1699483..1699602,1699736..1699817,1700319..1700483,1700854..1700981,1701064..1701164,1701378..1701462,1701595..1701722,1702053..1702209,1702292..1702426,1702524..1702877))
location: region:1691035-1702877:-1
so has part: feature:1702524-1702877:-1:exon
so has part: feature:1702292-1702426:-1:exon
so has part: feature:1702053-1702209:-1:exon
so has part: feature:1701595-1701722:-1:exon
so has part: feature:1701378-1701462:-1:exon
so has part: feature:1701064-1701164:-1:exon
so has part: feature:1700854-1700981:-1:exon
so has part: feature:1700319-1700483:-1:exon
so has part: feature:1699736-1699817:-1:exon
so has part: feature:1699483-1699602:-1:exon
so has part: feature:1699217-1699325:-1:exon
so has part: feature:1698850-1698944:-1:exon
so has part: feature:1698605-1698695:-1:exon
so has part: feature:1698264-1698388:-1:exon
so has part: feature:1697920-1698023:-1:exon
so has part: feature:1697654-1697812:-1:exon
so has part: feature:1697456-1697546:-1:exon
so has part: feature:1696800-1696905:-1:exon
so has part: feature:1696615-1696685:-1:exon
so has part: feature:1696382-1696507:-1:exon
so has part: feature:1695990-1696094:-1:exon
so has part: feature:1695808-1695876:-1:exon
so has part: feature:1695636-1695714:-1:exon
so has part: feature:1695321-1695448:-1:exon
so has part: feature:1693244-1693399:-1:exon
so has part: feature:1692848-1693075:-1:exon
so has part: feature:1692640-1692751:-1:exon
so has part: feature:1691952-1692277:-1:exon
so has part: feature:1691035-1691103:-1:exon

XP_038624267.1
type: Protein
SIO_000068: ncbiprotein

position:1691035:-1
position: 1691035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702877:-1
position: 1702877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702524-1702877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702292-1702426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1702053-1702209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701595-1701722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1701378-1701462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701064-1701164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1700854-1700981:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1700319-1700483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1699736-1699817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1699483-1699602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1699217-1699325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1698850-1698944:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698605-1698695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1698264-1698388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1697920-1698023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1697654-1697812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1697456-1697546:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1696800-1696905:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1696615-1696685:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1696382-1696507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1695990-1696094:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1695808-1695876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1695636-1695714:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1695321-1695448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1693244-1693399:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1692848-1693075:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1692640-1692751:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1691952-1692277:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691035-1691103:-1:exon

LSM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LSM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1711478..1714823)
location: region:1711478-1714823:-1
so has part: feature:1711478-1714823:-1:exon
subclass of: SO_0000010

119947226
type: Gene
SIO_000068: ncbigene

position:1711478:-1
position: 1711478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714823:-1
position: 1714823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1711478-1714823:-1:exon

LSM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LSM2
product: LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768830.1
SIO_010081: LSM2
subclass of: SO_0000673
so part of: LSM2
location: complement(join(1711478..1711882,1711980..1712039,1712496..1712526,1712826..1712893,1714730..1714823))
location: region:1711478-1714823:-1
so has part: feature:1714730-1714823:-1:exon
so has part: feature:1712826-1712893:-1:exon
so has part: feature:1712496-1712526:-1:exon
so has part: feature:1711980-1712039:-1:exon
so has part: feature:1711478-1711882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1714730-1714823:-1:exon

position:1714730:-1
position: 1714730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1712826-1712893:-1:exon

position:1712826:-1
position: 1712826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712893:-1
position: 1712893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1712496-1712526:-1:exon

position:1712496:-1
position: 1712496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712526:-1
position: 1712526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1711980-1712039:-1:exon

position:1711980:-1
position: 1711980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712039:-1
position: 1712039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1711478-1711882:-1:exon

position:1711882:-1
position: 1711882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LSM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm2
translation: MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
SIO_010081: LSM2
subclass of: SO_0000673
so part of: LSM2
location: complement(join(1711757..1711882,1711980..1712039,1712496..1712526,1712826..1712893,1714730..1714732))
location: region:1711757-1714732:-1
so has part: feature:1714730-1714732:-1:exon
so has part: feature:1712826-1712893:-1:exon
so has part: feature:1712496-1712526:-1:exon
so has part: feature:1711980-1712039:-1:exon
so has part: feature:1711757-1711882:-1:exon

XP_038624758.1
type: Protein
SIO_000068: ncbiprotein

position:1711757:-1
position: 1711757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714732:-1
position: 1714732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1714730-1714732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1712826-1712893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1712496-1712526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1711980-1712039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1711757-1711882:-1:exon

LOC119947300
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1716004..1718899
location: region:1716004-1718899:1
so has part: feature:1716004-1718899:1:exon
subclass of: SO_0000010

119947300
type: Gene
SIO_000068: ncbigene

position:1716004:1
position: 1716004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718899:1
position: 1718899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716004-1718899:1:exon

LOC119947300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119947300
product: heat shock 70 kDa protein 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768925.1
SIO_010081: LOC119947300
subclass of: SO_0000673
so part of: LOC119947300
location: join(1716004..1716042,1716858..1718899)
location: region:1716004-1718899:1
so has part: feature:1716004-1716042:1:exon
so has part: feature:1716858-1718899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1716004-1716042:1:exon

position:1716042:1
position: 1716042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1716858-1718899:1:exon

position:1716858:1
position: 1716858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119947300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119947300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 1A
translation: MAAPKGVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRVVSEAGKPKVQVSYKGEEKAFYPEEISSMVLTKMKETAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRAGKGERNVLIFDLGGGTFDVSVLTIDDGIFEVKATAGDTHLGGEDFDSRLVTHFAEEFRRKHKKDLSQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLFEGVDFYTSVTRARFEELCSDLFRGTLEPVEKALRDAKMDKAAIHEVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDRSEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLSGIPPAPRGVPQIEVSFDVDANGILNVTATDKSTGKANKITITNDKGRLSKEEVERMVQDAERYRAEDEAQREKVAAKNTLESYAFNMKSAVEGEDGGLRGKISEGDRQKVLDKCRQVLAWLDANQLAEKDEYDHKRKELEQVCHPIVTRLYQGEGAGTCGAQAQQGGSKAGPTIEEVD
SIO_010081: LOC119947300
subclass of: SO_0000673
so part of: LOC119947300
location: 1716885..1718813
location: region:1716885-1718813:1
so has part: feature:1716885-1718813:1:exon

XP_038624853.1
type: Protein
SIO_000068: ncbiprotein

position:1716885:1
position: 1716885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718813:1
position: 1718813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716885-1718813:1:exon

LOC119947170
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1726273..1729998
location: region:1726273-1729998:1
so has part: feature:1726273-1729998:1:exon
subclass of: SO_0000011

119947170
type: Gene
SIO_000068: ncbigene

position:1726273:1
position: 1726273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729998:1
position: 1729998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1726273-1729998:1:exon

LOC119947170
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119947170
product: uncharacterized LOC119947170
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005456477.1
SIO_010081: LOC119947170
subclass of: SO_0000673
so part of: LOC119947170
location: join(1726273..1726517,1726723..1726758,1729251..1729293,1729819..1729998)
location: region:1726273-1729998:1
so has part: feature:1726273-1726517:1:exon
so has part: feature:1726723-1726758:1:exon
so has part: feature:1729251-1729293:1:exon
so has part: feature:1729819-1729998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1726273-1726517:1:exon

position:1726517:1
position: 1726517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726723-1726758:1:exon

position:1726723:1
position: 1726723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726758:1
position: 1726758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1729251-1729293:1:exon

position:1729251:1
position: 1729251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729293:1
position: 1729293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1729819-1729998:1:exon

position:1729819:1
position: 1729819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119947418
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119947418
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1726574..1726635
location: region:1726574-1726635:1
so has part: feature:1726574-1726635:1:exon
subclass of: SO_0000578

119947418
type: Gene
SIO_000068: ncbigene

position:1726574:1
position: 1726574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726635:1
position: 1726635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1726574-1726635:1:exon

LOC119947418
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119947418
product: small nucleolar RNA SNORD48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00282
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456492.1
SIO_010081: LOC119947418
subclass of: SO_0000673
so part of: LOC119947418
location: 1726574..1726635
location: region:1726574-1726635:1
so has part: feature:1726574-1726635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1726574-1726635:1:exon

NEU1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NEU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1730193..1738148)
location: region:1730193-1738148:-1
so has part: feature:1730193-1738148:-1:exon
subclass of: SO_0000010

119947169
type: Gene
SIO_000068: ncbigene

position:1730193:-1
position: 1730193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738148:-1
position: 1738148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730193-1738148:-1:exon

NEU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NEU1
product: neuraminidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038768731.1
SIO_010081: NEU1
subclass of: SO_0000673
so part of: NEU1
location: complement(join(1730193..1730737,1730813..1731035,1731140..1731322,1735726..1735988,1737662..1737854,1737958..1738148))
location: region:1730193-1738148:-1
so has part: feature:1737958-1738148:-1:exon
so has part: feature:1737662-1737854:-1:exon
so has part: feature:1735726-1735988:-1:exon
so has part: feature:1731140-1731322:-1:exon
so has part: feature:1730813-1731035:-1:exon
so has part: feature:1730193-1730737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1737958-1738148:-1:exon

position:1737958:-1
position: 1737958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1737662-1737854:-1:exon

position:1737662:-1
position: 1737662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737854:-1
position: 1737854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1735726-1735988:-1:exon

position:1735726:-1
position: 1735726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735988:-1
position: 1735988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1731140-1731322:-1:exon

position:1731140:-1
position: 1731140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731322:-1
position: 1731322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1730813-1731035:-1:exon

position:1730813:-1
position: 1730813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731035:-1
position: 1731035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1730193-1730737:-1:exon

position:1730737:-1
position: 1730737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NEU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialidase-1
translation: MARSMGQREPGPRPGVFLLLPPLFLLLASAVEDAAQVQPLVTLEQLLWVSGKQIGAIDTFRIPLIAATPRGTLLAFAEARKMSASDEGAKFIASRRSVDGGSTWSPTAFIVDDGEASDGLNLGAVVSDEDTGVVFLLFSLCAHRAGCPVSSTMLIWSKDDGLSWSNPRNLSLEIGTETFAPGPGSGIQKRHEPQRGRLIVCGHGTLDRDGVFCLLSDDHGASWRYGAALRGLPFGQPKRDGDFSPDECQPYELPDGSVVINARNQNNYHCRCRIVLRSYDACDTLRPRDVTFDPELVDPVVAAGAVATRSGLVFFSNPAHPEQRVNLTLRWSLSNGTSWGKETVQLWPGPSGYSSLATLEATDSWGERAPQLYVLYEKGRSRYTEAISLVKVSVYGTL
SIO_010081: NEU1
subclass of: SO_0000673
so part of: NEU1
location: complement(join(1730511..1730737,1730813..1731035,1731140..1731322,1735726..1735988,1737662..1737854,1737958..1738065))
location: region:1730511-1738065:-1
so has part: feature:1737958-1738065:-1:exon
so has part: feature:1737662-1737854:-1:exon
so has part: feature:1735726-1735988:-1:exon
so has part: feature:1731140-1731322:-1:exon
so has part: feature:1730813-1731035:-1:exon
so has part: feature:1730511-1730737:-1:exon

XP_038624659.1
type: Protein
SIO_000068: ncbiprotein

position:1730511:-1
position: 1730511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738065:-1
position: 1738065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1737958-1738065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1737662-1737854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735726-1735988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1731140-1731322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1730813-1731035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1730511-1730737:-1:exon

SLC44A4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC44A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1740054..1759534)
location: region:1740054-1759534:-1
so has part: feature:1740054-1759534:-1:exon
subclass of: SO_0000010

119947136
type: Gene
SIO_000068: ncbigene

position:1740054:-1
position: 1740054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759534:-1
position: 1759534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740054-1759534:-1:exon

SLC44A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC44A4
product: solute carrier family 44 member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038768680.1
SIO_010081: SLC44A4
subclass of: SO_0000673
so part of: SLC44A4
location: complement(join(1740054..1740271,1742295..1742379,1742482..1742576,1742685..1742755,1744157..1744230,1744553..1744656,1745182..1745276,1746178..1746431,1746977..1747079,1747414..1747506,1748118..1748217,1749016..1749251,1750769..1750852,1750953..1751037,1751595..1751655,1751876..1751998,1752824..1752923,1753027..1753105,1753492..1753565,1753862..1753910,1759460..1759534))
location: region:1740054-1759534:-1
so has part: feature:1759460-1759534:-1:exon
so has part: feature:1753862-1753910:-1:exon
so has part: feature:1753492-1753565:-1:exon
so has part: feature:1753027-1753105:-1:exon
so has part: feature:1752824-1752923:-1:exon
so has part: feature:1751876-1751998:-1:exon
so has part: feature:1751595-1751655:-1:exon
so has part: feature:1750953-1751037:-1:exon
so has part: feature:1750769-1750852:-1:exon
so has part: feature:1749016-1749251:-1:exon
so has part: feature:1748118-1748217:-1:exon
so has part: feature:1747414-1747506:-1:exon
so has part: feature:1746977-1747079:-1:exon
so has part: feature:1746178-1746431:-1:exon
so has part: feature:1745182-1745276:-1:exon
so has part: feature:1744553-1744656:-1:exon
so has part: feature:1744157-1744230:-1:exon
so has part: feature:1742685-1742755:-1:exon
so has part: feature:1742482-1742576:-1:exon
so has part: feature:1742295-1742379:-1:exon
so has part: feature:1740054-1740271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1759460-1759534:-1:exon

position:1759460:-1
position: 1759460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1753862-1753910:-1:exon

position:1753862:-1
position: 1753862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753910:-1
position: 1753910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1753492-1753565:-1:exon

position:1753492:-1
position: 1753492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753565:-1
position: 1753565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1753027-1753105:-1:exon

position:1753027:-1
position: 1753027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753105:-1
position: 1753105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1752824-1752923:-1:exon

position:1752824:-1
position: 1752824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752923:-1
position: 1752923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1751876-1751998:-1:exon

position:1751876:-1
position: 1751876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751998:-1
position: 1751998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1751595-1751655:-1:exon

position:1751595:-1
position: 1751595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751655:-1
position: 1751655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1750953-1751037:-1:exon

position:1750953:-1
position: 1750953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751037:-1
position: 1751037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1750769-1750852:-1:exon

position:1750769:-1
position: 1750769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750852:-1
position: 1750852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1749016-1749251:-1:exon

position:1749016:-1
position: 1749016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749251:-1
position: 1749251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1748118-1748217:-1:exon

position:1748118:-1
position: 1748118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748217:-1
position: 1748217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1747414-1747506:-1:exon

position:1747414:-1
position: 1747414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747506:-1
position: 1747506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1746977-1747079:-1:exon

position:1746977:-1
position: 1746977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747079:-1
position: 1747079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1746178-1746431:-1:exon

position:1746178:-1
position: 1746178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746431:-1
position: 1746431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1745182-1745276:-1:exon

position:1745182:-1
position: 1745182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745276:-1
position: 1745276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1744553-1744656:-1:exon

position:1744553:-1
position: 1744553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744656:-1
position: 1744656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1744157-1744230:-1:exon

position:1744157:-1
position: 1744157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744230:-1
position: 1744230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1742685-1742755:-1:exon

position:1742685:-1
position: 1742685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742755:-1
position: 1742755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1742482-1742576:-1:exon

position:1742482:-1
position: 1742482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742576:-1
position: 1742576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1742295-1742379:-1:exon

position:1742295:-1
position: 1742295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742379:-1
position: 1742379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1740054-1740271:-1:exon

position:1740271:-1
position: 1740271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC44A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC44A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 4
translation: MGRGKVEEGGGGDEPYGKPHQFDPSFHGPIKKRGCTDVLCYILFMLFIAGYCIVGIVAWVYGDPQQVLYPRNSSGLYCGVGANRDKPNLMYFNIFSCARYTNILTMATNGLQCPTTQICVSSCPQIHWVVLPTDLYKTVSQVFTEKQDFCHPEVDGNMRVIDSLKHELCPSFLLQSSPVASRCIPFANQSTVDLPGISQANISDGIKGLFDTLGARDLSLKIFEDFTHSWYWILIALLISLVLSLVFLLLLQLLAGPLVYVLIVGVLGILAYAIYHCWHEYQWLRDHGTSMADVGFTTDLAAYRSTKEIWLVALIVVAVLEGILVLLLIFLRVRIRIAIALLQEASKAIGQMMSTLFYPLVTFALLIICIAYWAITAVYLATTGKPLYSLSAPNLTEPGCQHIDFNQTCDPRKPIANNSCPGLSCHFLQYNSNGPTQRVLFGLQAYSVLGLFWTVNWVLALGQCVLAGAFASFYWAFHKPKDIPAFPLGASFMRTLRYHTGSLAFGALILTLVQMVRLILEYLDHKLKGAKNSVARCVLCCLKCCFWCLERYIKILNRNAYIMIAIYGKNFCVSARNAFMLLMRNLTRVFVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSNRIPAPSKHLRAPTLNFYWLPMLIVIFGSYLIAHGFFSVFAMCVDTLFLCFLEDLERNDGSLDRPYYMPKSLMQILGKKNQAPKK
SIO_010081: SLC44A4
subclass of: SO_0000673
so part of: SLC44A4
location: complement(join(1740168..1740271,1742295..1742379,1742482..1742576,1742685..1742755,1744157..1744230,1744553..1744656,1745182..1745276,1746178..1746431,1746977..1747079,1747414..1747506,1748118..1748217,1749016..1749251,1750769..1750852,1750953..1751037,1751595..1751655,1751876..1751998,1752824..1752923,1753027..1753105,1753492..1753565,1753862..1753910,1759460..1759508))
location: region:1740168-1759508:-1
so has part: feature:1759460-1759508:-1:exon
so has part: feature:1753862-1753910:-1:exon
so has part: feature:1753492-1753565:-1:exon
so has part: feature:1753027-1753105:-1:exon
so has part: feature:1752824-1752923:-1:exon
so has part: feature:1751876-1751998:-1:exon
so has part: feature:1751595-1751655:-1:exon
so has part: feature:1750953-1751037:-1:exon
so has part: feature:1750769-1750852:-1:exon
so has part: feature:1749016-1749251:-1:exon
so has part: feature:1748118-1748217:-1:exon
so has part: feature:1747414-1747506:-1:exon
so has part: feature:1746977-1747079:-1:exon
so has part: feature:1746178-1746431:-1:exon
so has part: feature:1745182-1745276:-1:exon
so has part: feature:1744553-1744656:-1:exon
so has part: feature:1744157-1744230:-1:exon
so has part: feature:1742685-1742755:-1:exon
so has part: feature:1742482-1742576:-1:exon
so has part: feature:1742295-1742379:-1:exon
so has part: feature:1740168-1740271:-1:exon

XP_038624608.1
type: Protein
SIO_000068: ncbiprotein

position:1740168:-1
position: 1740168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759508:-1
position: 1759508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1759460-1759508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1753862-1753910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1753492-1753565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1753027-1753105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752824-1752923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1751876-1751998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751595-1751655:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750953-1751037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750769-1750852:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749016-1749251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1748118-1748217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1747414-1747506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1746977-1747079:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1746178-1746431:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1745182-1745276:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1744553-1744656:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1744157-1744230:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1742685-1742755:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1742482-1742576:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1742295-1742379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1740168-1740271:-1:exon

EHMT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EHMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1761976..1774564)
location: region:1761976-1774564:-1
so has part: feature:1761976-1774564:-1:exon
subclass of: SO_0000010

119946760
type: Gene
SIO_000068: ncbigene

position:1761976:-1
position: 1761976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1774564:-1
position: 1774564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1761976-1774564:-1:exon

EHMT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EHMT2
product: euchromatic histone lysine methyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038768209.1
SIO_010081: EHMT2
subclass of: SO_0000673
so part of: EHMT2
location: complement(join(1761976..1762240,1762575..1762750,1763107..1763185,1763545..1763631,1763737..1763852,1764169..1764246,1764450..1764594,1764799..1764966,1765240..1765394,1765654..1765758,1766066..1766167,1767039..1767161,1767252..1767358,1767741..1767823,1767923..1768105,1768803..1769032,1769144..1769287,1769597..1769745,1770055..1770159,1770328..1770439,1770529..1770651,1771339..1771494,1771701..1771786,1771920..1772004,1773148..1773365,1774393..1774564))
location: region:1761976-1774564:-1
so has part: feature:1774393-1774564:-1:exon
so has part: feature:1773148-1773365:-1:exon
so has part: feature:1771920-1772004:-1:exon
so has part: feature:1771701-1771786:-1:exon
so has part: feature:1771339-1771494:-1:exon
so has part: feature:1770529-1770651:-1:exon
so has part: feature:1770328-1770439:-1:exon
so has part: feature:1770055-1770159:-1:exon
so has part: feature:1769597-1769745:-1:exon
so has part: feature:1769144-1769287:-1:exon
so has part: feature:1768803-1769032:-1:exon
so has part: feature:1767923-1768105:-1:exon
so has part: feature:1767741-1767823:-1:exon
so has part: feature:1767252-1767358:-1:exon
so has part: feature:1767039-1767161:-1:exon
so has part: feature:1766066-1766167:-1:exon
so has part: feature:1765654-1765758:-1:exon
so has part: feature:1765240-1765394:-1:exon
so has part: feature:1764799-1764966:-1:exon
so has part: feature:1764450-1764594:-1:exon
so has part: feature:1764169-1764246:-1:exon
so has part: feature:1763737-1763852:-1:exon
so has part: feature:1763545-1763631:-1:exon
so has part: feature:1763107-1763185:-1:exon
so has part: feature:1762575-1762750:-1:exon
so has part: feature:1761976-1762240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1774393-1774564:-1:exon

position:1774393:-1
position: 1774393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773148-1773365:-1:exon

position:1773148:-1
position: 1773148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773365:-1
position: 1773365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1771920-1772004:-1:exon

position:1771920:-1
position: 1771920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772004:-1
position: 1772004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1771701-1771786:-1:exon

position:1771701:-1
position: 1771701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771786:-1
position: 1771786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1771339-1771494:-1:exon

position:1771339:-1
position: 1771339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771494:-1
position: 1771494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1770529-1770651:-1:exon

position:1770529:-1
position: 1770529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770651:-1
position: 1770651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1770328-1770439:-1:exon

position:1770328:-1
position: 1770328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770439:-1
position: 1770439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1770055-1770159:-1:exon

position:1770055:-1
position: 1770055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770159:-1
position: 1770159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1769597-1769745:-1:exon