Tachyglossus aculeatus isolate mTacAcu1 chromosome Y1, mTacAcu1.pri, whole genome shotgun sequence.
Tachyglossus aculeatus (Australian echidna)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM027627.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Australia: Upper Barnard River, New South Wales
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC119946652, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC119946652, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC119946652, transcript variant X2
heterogeneous nuclear ribonucleoprotein A0-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
mothers against decapentaplegic homolog 5-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
mothers against decapentaplegic homolog 5-like isoform X1
mothers against decapentaplegic homolog 5-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
mothers against decapentaplegic homolog 5-like isoform X2