Tachyglossus aculeatus isolate mTacAcu1 chromosome 23, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome 23, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052088.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052088.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027622.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 43765345
topology: linear
so has quality: SO_0000987
location: 1..43765345
location: region:1-43765345:1
RO_0002162: 9261

NC_052088
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43765345:1
position: 43765345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43765345:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: 23
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

LOC119944763
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269376..307429)
location: region:269376-307429:-1
so has part: feature:269376-307429:-1:exon
subclass of: SO_0000011

119944763
type: Gene
SIO_000068: ncbigene

position:269376:-1
position: 269376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307429:-1
position: 307429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269376-307429:-1:exon

LOC119944763
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119944763
product: uncharacterized LOC119944763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005455955.1
SIO_010081: LOC119944763
subclass of: SO_0000673
so part of: LOC119944763
location: complement(join(269376..269430,302678..303003,307315..307429))
location: region:269376-307429:-1
so has part: feature:307315-307429:-1:exon
so has part: feature:302678-303003:-1:exon
so has part: feature:269376-269430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307315-307429:-1:exon

position:307315:-1
position: 307315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302678-303003:-1:exon

position:302678:-1
position: 302678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303003:-1
position: 303003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269376-269430:-1:exon

position:269430:-1
position: 269430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119944484
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(359530..360827)
location: region:359530-360827:-1
so has part: feature:359530-360827:-1:exon

119944484
type: Gene
SIO_000068: ncbigene

position:359530:-1
position: 359530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360827:-1
position: 360827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359530-360827:-1:exon

LOC119944484
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119944484
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119944484
subclass of: SO_0000673
so part of: LOC119944484
location: complement(359530..359718)
location: region:359530-359718:-1
so has part: feature:359530-359718:-1:exon

position:359718:-1
position: 359718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359530-359718:-1:exon

LOC119944484
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119944484
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119944484
subclass of: SO_0000673
so part of: LOC119944484
location: complement(360023..360827)
location: region:360023-360827:-1
so has part: feature:360023-360827:-1:exon

position:360023:-1
position: 360023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360023-360827:-1:exon

SUSD6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364951..522725
location: region:364951-522725:1
so has part: feature:364951-522725:1:exon
subclass of: SO_0000010

119944544
type: Gene
SIO_000068: ncbigene

position:364951:1
position: 364951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522725:1
position: 522725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364951-522725:1:exon

SUSD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SUSD6
product: sushi domain containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765521.1
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(364951..365023,430133..430328,462841..462921,474850..475047,512083..512280,513718..513856,515579..516033,518521..522725)
location: region:364951-522725:1
so has part: feature:364951-365023:1:exon
so has part: feature:430133-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-522725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364951-365023:1:exon

position:365023:1
position: 365023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430133-430328:1:exon

position:430133:1
position: 430133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430328:1
position: 430328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462841-462921:1:exon

position:462841:1
position: 462841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462921:1
position: 462921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474850-475047:1:exon

position:474850:1
position: 474850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475047:1
position: 475047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512083-512280:1:exon

position:512083:1
position: 512083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512280:1
position: 512280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:513718-513856:1:exon

position:513718:1
position: 513718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513856:1
position: 513856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:515579-516033:1:exon

position:515579:1
position: 515579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516033:1
position: 516033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:518521-522725:1:exon

position:518521:1
position: 518521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUSD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SUSD6
product: sushi domain containing 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765524.1
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(364951..365023,430133..430328,462841..462921,512083..512280,513718..513856,515579..516033,518521..522725)
location: region:364951-522725:1
so has part: feature:364951-365023:1:exon
so has part: feature:430133-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-522725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364951-365023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430133-430328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462841-462921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518521-522725:1:exon

SUSD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SUSD6
product: sushi domain containing 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765523.1
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(364951..365023,430133..430328,474850..475047,512083..512280,513718..513856,515579..516033,518521..522725)
location: region:364951-522725:1
so has part: feature:364951-365023:1:exon
so has part: feature:430133-430328:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-522725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364951-365023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430133-430328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474850-475047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518521-522725:1:exon

SUSD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SUSD6
product: sushi domain containing 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765525.1
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(364951..365023,430133..430328,512083..512280,513718..513856,515579..516033,518521..522725)
location: region:364951-522725:1
so has part: feature:364951-365023:1:exon
so has part: feature:430133-430328:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-522725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364951-365023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430133-430328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518521-522725:1:exon

SUSD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SUSD6
product: sushi domain containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765522.1
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(429614..429632,430133..430328,462841..462921,474850..475047,512083..512280,513718..513856,515579..516033,518521..522725)
location: region:429614-522725:1
so has part: feature:429614-429632:1:exon
so has part: feature:430133-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-522725:1:exon

position:429614:1
position: 429614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429614-429632:1:exon

position:429632:1
position: 429632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430133-430328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462841-462921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474850-475047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:518521-522725:1:exon

SUSD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 6 isoform X1
translation: MCHGRITPKNNSDSRFASLGHGFFLMLMTLSTLFPEGLTSAAREHHLGRNKALHPGRGEIKGLTSQKVCPQPPAPENGGFSCHPSPCQYPLTSDSIIEYLCDEGYTLKGDDKYLTCKNGEWDPPTEISCLPSQVCPKPPAPENGGYVCHPTPCQYPLTSGSVIEYLCDEGYMLKGDYKYLTCKNGEWDPPMEISCRLSPDTKSHPTIGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGNQVSIMVDGVQVSLPSYEEAVYGHTGNQGPPTDSRIQIVLSEGAGPSGVREMLQQQAPDRDRDRDRGAPGSCPAGGEAEALGQPGSSGEAHGAQRSETAIVHQACASASASAASSWMAARKDASDSENSDIQSLLSLTSEEYTDDIPLLKEA
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(430208..430328,462841..462921,474850..475047,512083..512280,513718..513856,515579..516033,518521..518546)
location: region:430208-518546:1
so has part: feature:430208-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-518546:1:exon

XP_038621449.1
type: Protein
SIO_000068: ncbiprotein

position:430208:1
position: 430208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518546:1
position: 518546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430208-430328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462841-462921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474850-475047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518521-518546:1:exon

SUSD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 6 isoform X1
translation: MCHGRITPKNNSDSRFASLGHGFFLMLMTLSTLFPEGLTSAAREHHLGRNKALHPGRGEIKGLTSQKVCPQPPAPENGGFSCHPSPCQYPLTSDSIIEYLCDEGYTLKGDDKYLTCKNGEWDPPTEISCLPSQVCPKPPAPENGGYVCHPTPCQYPLTSGSVIEYLCDEGYMLKGDYKYLTCKNGEWDPPMEISCRLSPDTKSHPTIGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGNQVSIMVDGVQVSLPSYEEAVYGHTGNQGPPTDSRIQIVLSEGAGPSGVREMLQQQAPDRDRDRDRGAPGSCPAGGEAEALGQPGSSGEAHGAQRSETAIVHQACASASASAASSWMAARKDASDSENSDIQSLLSLTSEEYTDDIPLLKEA
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(430208..430328,462841..462921,474850..475047,512083..512280,513718..513856,515579..516033,518521..518546)
location: region:430208-518546:1
so has part: feature:430208-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-518546:1:exon

XP_038621450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430208-430328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462841-462921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474850-475047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518521-518546:1:exon

SUSD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 6 isoform X3
translation: MCHGRITPKNNSDSRFASLGHGFFLMLMTLSTLFPEGLTSAAREHHLGRNKALHPGRGEIKGLTSQKVCPKPPAPENGGYVCHPTPCQYPLTSGSVIEYLCDEGYMLKGDYKYLTCKNGEWDPPMEISCRLSPDTKSHPTIGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGNQVSIMVDGVQVSLPSYEEAVYGHTGNQGPPTDSRIQIVLSEGAGPSGVREMLQQQAPDRDRDRDRGAPGSCPAGGEAEALGQPGSSGEAHGAQRSETAIVHQACASASASAASSWMAARKDASDSENSDIQSLLSLTSEEYTDDIPLLKEA
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(430208..430328,462841..462921,512083..512280,513718..513856,515579..516033,518521..518546)
location: region:430208-518546:1
so has part: feature:430208-430328:1:exon
so has part: feature:462841-462921:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-518546:1:exon

XP_038621452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430208-430328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462841-462921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518521-518546:1:exon

SUSD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 6 isoform X2
translation: MCHGRITPKNNSDSRFASLGHGFFLMLMTLSTLFPEGLTSVCPQPPAPENGGFSCHPSPCQYPLTSDSIIEYLCDEGYTLKGDDKYLTCKNGEWDPPTEISCLPSQVCPKPPAPENGGYVCHPTPCQYPLTSGSVIEYLCDEGYMLKGDYKYLTCKNGEWDPPMEISCRLSPDTKSHPTIGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGNQVSIMVDGVQVSLPSYEEAVYGHTGNQGPPTDSRIQIVLSEGAGPSGVREMLQQQAPDRDRDRDRGAPGSCPAGGEAEALGQPGSSGEAHGAQRSETAIVHQACASASASAASSWMAARKDASDSENSDIQSLLSLTSEEYTDDIPLLKEA
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(430208..430328,474850..475047,512083..512280,513718..513856,515579..516033,518521..518546)
location: region:430208-518546:1
so has part: feature:430208-430328:1:exon
so has part: feature:474850-475047:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-518546:1:exon

XP_038621451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430208-430328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474850-475047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518521-518546:1:exon

SUSD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SUSD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 6 isoform X4
translation: MCHGRITPKNNSDSRFASLGHGFFLMLMTLSTLFPEGLTSVCPKPPAPENGGYVCHPTPCQYPLTSGSVIEYLCDEGYMLKGDYKYLTCKNGEWDPPMEISCRLSPDTKSHPTIGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGNQVSIMVDGVQVSLPSYEEAVYGHTGNQGPPTDSRIQIVLSEGAGPSGVREMLQQQAPDRDRDRDRGAPGSCPAGGEAEALGQPGSSGEAHGAQRSETAIVHQACASASASAASSWMAARKDASDSENSDIQSLLSLTSEEYTDDIPLLKEA
SIO_010081: SUSD6
subclass of: SO_0000673
so part of: SUSD6
location: join(430208..430328,512083..512280,513718..513856,515579..516033,518521..518546)
location: region:430208-518546:1
so has part: feature:430208-430328:1:exon
so has part: feature:512083-512280:1:exon
so has part: feature:513718-513856:1:exon
so has part: feature:515579-516033:1:exon
so has part: feature:518521-518546:1:exon

XP_038621453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430208-430328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512083-512280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513718-513856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515579-516033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518521-518546:1:exon

SRSF5
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SRSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 594997..599000
location: region:594997-599000:1
so has part: feature:594997-599000:1:exon
subclass of: SO_0000010

119944675
type: Gene
SIO_000068: ncbigene

position:594997:1
position: 594997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599000:1
position: 599000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594997-599000:1:exon

SRSF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SRSF5
product: serine and arginine rich splicing factor 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765740.1
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(594997..595117,595696..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598583..599000)
location: region:594997-599000:1
so has part: feature:594997-595117:1:exon
so has part: feature:595696-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598583-599000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594997-595117:1:exon

position:595117:1
position: 595117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595696-595843:1:exon

position:595696:1
position: 595696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595843:1
position: 595843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596081-596151:1:exon

position:596081:1
position: 596081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596151:1
position: 596151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596675-596773:1:exon

position:596675:1
position: 596675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596773:1
position: 596773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596866-596935:1:exon

position:596866:1
position: 596866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596935:1
position: 596935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598191-598264:1:exon

position:598191:1
position: 598191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598264:1
position: 598264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598367-598477:1:exon

position:598367:1
position: 598367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598477:1
position: 598477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:598583-599000:1:exon

position:598583:1
position: 598583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SRSF5
product: serine and arginine rich splicing factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765738.1
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(595001..595117,595696..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598580..599000)
location: region:595001-599000:1
so has part: feature:595001-595117:1:exon
so has part: feature:595696-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598580-599000:1:exon

position:595001:1
position: 595001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595001-595117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595696-595843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596081-596151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596675-596773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596866-596935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598191-598264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598367-598477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598580-599000:1:exon

position:598580:1
position: 598580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SRSF5
product: serine and arginine rich splicing factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765739.1
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(595523..595598,595696..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598580..599000)
location: region:595523-599000:1
so has part: feature:595523-595598:1:exon
so has part: feature:595696-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598580-599000:1:exon

position:595523:1
position: 595523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595523-595598:1:exon

position:595598:1
position: 595598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595696-595843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596081-596151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596675-596773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596866-596935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598191-598264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598367-598477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598580-599000:1:exon

SRSF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SRSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 5 isoform X1
translation: MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPMPEKSQKRGSSSRSKSPASVGRQRSRSRSRSVDSGN
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(595718..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598580..598829)
location: region:595718-598829:1
so has part: feature:595718-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598580-598829:1:exon

XP_038621666.1
type: Protein
SIO_000068: ncbiprotein

position:595718:1
position: 595718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598829:1
position: 598829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595718-595843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596081-596151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596675-596773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596866-596935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598191-598264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598367-598477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598580-598829:1:exon

SRSF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SRSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 5 isoform X1
translation: MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPMPEKSQKRGSSSRSKSPASVGRQRSRSRSRSVDSGN
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(595718..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598580..598829)
location: region:595718-598829:1
so has part: feature:595718-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598580-598829:1:exon

XP_038621667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595718-595843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596081-596151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596675-596773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596866-596935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598191-598264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598367-598477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598580-598829:1:exon

SRSF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SRSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 5 isoform X2
translation: MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPMPEKSQKRGSSSRSKSPASVGRQRSRSRSRSVDSGN
SIO_010081: SRSF5
subclass of: SO_0000673
so part of: SRSF5
location: join(595718..595843,596081..596151,596675..596773,596866..596935,598191..598264,598367..598477,598583..598829)
location: region:595718-598829:1
so has part: feature:595718-595843:1:exon
so has part: feature:596081-596151:1:exon
so has part: feature:596675-596773:1:exon
so has part: feature:596866-596935:1:exon
so has part: feature:598191-598264:1:exon
so has part: feature:598367-598477:1:exon
so has part: feature:598583-598829:1:exon

XP_038621668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595718-595843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596081-596151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596675-596773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596866-596935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598191-598264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598367-598477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598583-598829:1:exon

SLC10A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC10A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(603687..645188)
location: region:603687-645188:-1
so has part: feature:603687-645188:-1:exon
subclass of: SO_0000010

119944485
type: Gene
SIO_000068: ncbigene

position:603687:-1
position: 603687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645188:-1
position: 645188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603687-645188:-1:exon

SLC10A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC10A1
product: solute carrier family 10 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765428.1
SIO_010081: SLC10A1
subclass of: SO_0000673
so part of: SLC10A1
location: complement(join(603687..604305,610118..610314,627775..627953,636572..636782,644731..645188))
location: region:603687-645188:-1
so has part: feature:644731-645188:-1:exon
so has part: feature:636572-636782:-1:exon
so has part: feature:627775-627953:-1:exon
so has part: feature:610118-610314:-1:exon
so has part: feature:603687-604305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644731-645188:-1:exon

position:644731:-1
position: 644731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636572-636782:-1:exon

position:636572:-1
position: 636572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636782:-1
position: 636782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:627775-627953:-1:exon

position:627775:-1
position: 627775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627953:-1
position: 627953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610118-610314:-1:exon

position:610118:-1
position: 610118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610314:-1
position: 610314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603687-604305:-1:exon

position:604305:-1
position: 604305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC10A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC10A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter
translation: MESPGLVDNNSSWPLNFTFPPNFGRRPTDMALSVILVVMLFVTMICLGCTMEFAQIKMHLFKPKGVAIALLAQYGVMPLTAFTLGRVFQLNTIESLAILICGCSPGGSLSNVFSLAMKGDMNLSIVMTTCSTFSALALMPLLLYLYSLGLYERDVQNKVPYGGIILSLVLVLIPCTIGIVLKSKRPQYVSCVTKVGAVITVVLVIAVVVLSSINVGHSILYVMTAPLLAISFLMPLTGFLLGYLLATLFQLNERCRRTVSMETGCQNVQLCSTILNVTFPLEVIGPLFFFPLLYVIFQVGEGLLLIVLFRCYEKIRTPCAEPKMIYRAVSENASEAKTGPKSNGSHEGEARSMNSFHSPVAPMLALEHSSQVASSQA
SIO_010081: SLC10A1
subclass of: SO_0000673
so part of: SLC10A1
location: complement(join(604130..604305,610118..610314,627775..627953,636572..636782,644731..645101))
location: region:604130-645101:-1
so has part: feature:644731-645101:-1:exon
so has part: feature:636572-636782:-1:exon
so has part: feature:627775-627953:-1:exon
so has part: feature:610118-610314:-1:exon
so has part: feature:604130-604305:-1:exon

XP_038621356.1
type: Protein
SIO_000068: ncbiprotein

position:604130:-1
position: 604130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645101:-1
position: 645101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644731-645101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:636572-636782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627775-627953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610118-610314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604130-604305:-1:exon

LOC119944926
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944926
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 614381..614517
location: region:614381-614517:1
so has part: feature:614381-614517:1:exon
subclass of: SO_0000578

119944926
type: Gene
SIO_000068: ncbigene

position:614381:1
position: 614381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614517:1
position: 614517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614381-614517:1:exon

LOC119944926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944926
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456067.1
SIO_010081: LOC119944926
subclass of: SO_0000673
so part of: LOC119944926
location: 614381..614517
location: region:614381-614517:1
so has part: feature:614381-614517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614381-614517:1:exon

SMOC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SMOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 721248..890243
location: region:721248-890243:1
so has part: feature:721248-890243:1:exon
subclass of: SO_0000010

119944614
type: Gene
SIO_000068: ncbigene

position:721248:1
position: 721248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890243:1
position: 890243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721248-890243:1:exon

SMOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SMOC1
product: SPARC related modular calcium binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765635.1
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721248..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,886595..886648,887715..890243)
location: region:721248-890243:1
so has part: feature:721248-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:886595-886648:1:exon
so has part: feature:887715-890243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721248-721623:1:exon

position:721623:1
position: 721623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

position:806143:1
position: 806143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806308:1
position: 806308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

position:809159:1
position: 809159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809271:1
position: 809271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

position:828207:1
position: 828207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828306:1
position: 828306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

position:831847:1
position: 831847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831894:1
position: 831894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

position:845536:1
position: 845536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845625:1
position: 845625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

position:847460:1
position: 847460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847540:1
position: 847540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

position:864892:1
position: 864892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865084:1
position: 865084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

position:871324:1
position: 871324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871406:1
position: 871406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

position:871575:1
position: 871575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871680:1
position: 871680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

position:878531:1
position: 878531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878778:1
position: 878778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:886595-886648:1:exon

position:886595:1
position: 886595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886648:1
position: 886648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887715-890243:1:exon

position:887715:1
position: 887715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SMOC1
product: SPARC related modular calcium binding 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765638.1
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721248..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,887712..890243)
location: region:721248-890243:1
so has part: feature:721248-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:887712-890243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721248-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887712-890243:1:exon

position:887712:1
position: 887712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SMOC1
product: SPARC related modular calcium binding 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765639.1
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721248..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,887715..890243)
location: region:721248-890243:1
so has part: feature:721248-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:887715-890243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721248-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887715-890243:1:exon

SMOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SMOC1
product: SPARC related modular calcium binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765636.1
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721249..721623,806143..806308,809159..809271,828207..828306,831847..831894,845569..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,886595..886648,887715..890243)
location: region:721249-890243:1
so has part: feature:721249-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845569-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:886595-886648:1:exon
so has part: feature:887715-890243:1:exon

position:721249:1
position: 721249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721249-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845569-845625:1:exon

position:845569:1
position: 845569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886595-886648:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887715-890243:1:exon

SMOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SMOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1 isoform X1
translation: MLPRLRGRMVTSHLLLLLLLLHMLHARPHRASGPRFLISDHDPQCNLHCSRSQSKPLCASDGRSYESTCDYQRAKCRDPALGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECSEDGAFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPSGQGNSGRKVSFRFFLTLNSEDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVQSCDQERQSALEEAKHSPREGIVIPECGPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESDARSRSTEVDDAFKDRELPGCPEEKKVEFITSLLDALTTDMVQAINSAAPAGGGRFSEPDPSHTLEERVVHWYFSQLDNNSSNDINKREMKSFKRYVKKKAKPKKCARRFTDYCDLNRDKSISLQELKGCLGVSKEGGSSAGSFPHGKKQGMNPFRRLV
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721519..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,886595..886648,887715..887728)
location: region:721519-887728:1
so has part: feature:721519-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:886595-886648:1:exon
so has part: feature:887715-887728:1:exon

XP_038621563.1
type: Protein
SIO_000068: ncbiprotein

position:721519:1
position: 721519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887728:1
position: 887728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721519-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886595-886648:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887715-887728:1:exon

SMOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SMOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1 isoform X3
translation: MLPRLRGRMVTSHLLLLLLLLHMLHARPHRASGPRFLISDHDPQCNLHCSRSQSKPLCASDGRSYESTCDYQRAKCRDPALGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECSEDGAFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPSGQGNSGRKVSFRFFLTLNSEDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVQSCDQERQSALEEAKHSPREGIVIPECGPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESDARSRSTEVDDAFKDRELPGCPEEKKVEFITSLLDALTTDMVQAINSAAPAGGGRFSEPDPSHTLEERVVHWYFSQLDNNSSNDINKREMKSFKRYVKKKAKPKKCARRFTDYCDLNRDKSISLQELKGCLGVSKEGVGRLV
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721519..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,887712..887728)
location: region:721519-887728:1
so has part: feature:721519-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:887712-887728:1:exon

XP_038621566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721519-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887712-887728:1:exon

SMOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SMOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1 isoform X4
translation: MLPRLRGRMVTSHLLLLLLLLHMLHARPHRASGPRFLISDHDPQCNLHCSRSQSKPLCASDGRSYESTCDYQRAKCRDPALGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECSEDGAFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPSGQGNSGRKVSFRFFLTLNSEDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVQSCDQERQSALEEAKHSPREGIVIPECGPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESDARSRSTEVDDAFKDRELPGCPEEKKVEFITSLLDALTTDMVQAINSAAPAGGGRFSEPDPSHTLEERVVHWYFSQLDNNSSNDINKREMKSFKRYVKKKAKPKKCARRFTDYCDLNRDKSISLQELKGCLGVSKEGGRLV
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721519..721623,806143..806308,809159..809271,828207..828306,831847..831894,845536..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,887715..887728)
location: region:721519-887728:1
so has part: feature:721519-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845536-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:887715-887728:1:exon

XP_038621567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721519-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845536-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887715-887728:1:exon

SMOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SMOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1 isoform X2
translation: MLPRLRGRMVTSHLLLLLLLLHMLHARPHRASGPRFLISDHDPQCNLHCSRSQSKPLCASDGRSYESTCDYQRAKCRDPALGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECSEDGAFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPSGQGNSGRKEDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVQSCDQERQSALEEAKHSPREGIVIPECGPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESDARSRSTEVDDAFKDRELPGCPEEKKVEFITSLLDALTTDMVQAINSAAPAGGGRFSEPDPSHTLEERVVHWYFSQLDNNSSNDINKREMKSFKRYVKKKAKPKKCARRFTDYCDLNRDKSISLQELKGCLGVSKEGGSSAGSFPHGKKQGMNPFRRLV
SIO_010081: SMOC1
subclass of: SO_0000673
so part of: SMOC1
location: join(721519..721623,806143..806308,809159..809271,828207..828306,831847..831894,845569..845625,847460..847540,864892..865084,871324..871406,871575..871680,878531..878778,886595..886648,887715..887728)
location: region:721519-887728:1
so has part: feature:721519-721623:1:exon
so has part: feature:806143-806308:1:exon
so has part: feature:809159-809271:1:exon
so has part: feature:828207-828306:1:exon
so has part: feature:831847-831894:1:exon
so has part: feature:845569-845625:1:exon
so has part: feature:847460-847540:1:exon
so has part: feature:864892-865084:1:exon
so has part: feature:871324-871406:1:exon
so has part: feature:871575-871680:1:exon
so has part: feature:878531-878778:1:exon
so has part: feature:886595-886648:1:exon
so has part: feature:887715-887728:1:exon

XP_038621564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721519-721623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806143-806308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809159-809271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828207-828306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831847-831894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845569-845625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847460-847540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864892-865084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871324-871406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871575-871680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878531-878778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886595-886648:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887715-887728:1:exon

SLC8A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(902046..1071100)
location: region:902046-1071100:-1
so has part: feature:902046-1071100:-1:exon
subclass of: SO_0000010

119944750
type: Gene
SIO_000068: ncbigene

position:902046:-1
position: 902046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071100:-1
position: 1071100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902046-1071100:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765876.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017910,1070955..1071100))
location: region:902046-1071100:-1
so has part: feature:1070955-1071100:-1:exon
so has part: feature:1016080-1017910:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070955-1071100:-1:exon

position:1070955:-1
position: 1070955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016080-1017910:-1:exon

position:1016080:-1
position: 1016080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017910:-1
position: 1017910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927077-927180:-1:exon

position:927077:-1
position: 927077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927180:-1
position: 927180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918438-918455:-1:exon

position:918438:-1
position: 918438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918455:-1
position: 918455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912646-912770:-1:exon

position:912646:-1
position: 912646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912770:-1
position: 912770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:911839-911938:-1:exon

position:911839:-1
position: 911839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911938:-1
position: 911938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:906210-906485:-1:exon

position:906210:-1
position: 906210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906485:-1
position: 906485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:902046-904004:-1:exon

position:904004:-1
position: 904004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765875.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,927077..927180,1016080..1017910,1038587..1038609))
location: region:902046-1038609:-1
so has part: feature:1038587-1038609:-1:exon
so has part: feature:1016080-1017910:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

position:1038609:-1
position: 1038609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038587-1038609:-1:exon

position:1038587:-1
position: 1038587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016080-1017910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765874.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906482,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017910,1038587..1038609))
location: region:902046-1038609:-1
so has part: feature:1038587-1038609:-1:exon
so has part: feature:1016080-1017910:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906482:-1:exon
so has part: feature:902046-904004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038587-1038609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016080-1017910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906210-906482:-1:exon

position:906482:-1
position: 906482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765873.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017910,1038587..1038609))
location: region:902046-1038609:-1
so has part: feature:1038587-1038609:-1:exon
so has part: feature:1016080-1017910:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038587-1038609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016080-1017910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765879.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,1016080..1016197))
location: region:902046-1016197:-1
so has part: feature:1016080-1016197:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

position:1016197:-1
position: 1016197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1016197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765877.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,918438..918455,932475..932554))
location: region:902046-932554:-1
so has part: feature:932475-932554:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

position:932554:-1
position: 932554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932475-932554:-1:exon

position:932475:-1
position: 932475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC8A3
product: solute carrier family 8 member A3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765878.1
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(902046..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927180,932475..932532))
location: region:902046-932532:-1
so has part: feature:932475-932532:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:902046-904004:-1:exon

position:932532:-1
position: 932532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932475-932532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902046-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X3
translation: MARSGLRPLASALLRCGLLTAALFSDGLWAEAGAPAAGARPGPANESCSGTSDCKEGVILPIWYPENPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASIEVITSQEREVTVRKPNGETGTATIRVWNETVSNLTLMALGSSAPEILLSLIEVCGHGFAAGDLGPSTIVGSAAFNMFVIVGICVYVIPEGEARRIKHLRVFFVTAAWSVFAYVWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWAADRRLLFPKYAPKRYRADKHRGIVIETEGGPPKGIEMDGKVANDAHFPGGSPGPIDGREADRSRREMIHILKDLKQKHPDKDLDQLVELANYHALSHQQKSRAFYRIQATRLMTGAGNVLKKHAAEQAKKASGLSEVRPEEPEDPKVSKVFFDPCSYQCLENCGAVLLTVVRRGGDPSETLYVDYKTEDGSANAGADYEFTEGTVVLKPGETRKEFSVGIIDDDIFEEDEHFFVRLSNVRLAEEPLGDGPPPAPRAALASPCMATVTILDDDHAGIFTFERDLVRVSESVGIMDVQVLRTSGARGTVLVPFRTLEGSAKGGGQDFEDTYGELEFKNDETVKTVRVKIVDEEEYERQENFFIALGEPKWMERGISDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,927077..927180,1016080..1017848))
location: region:903628-1017848:-1
so has part: feature:1016080-1017848:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621803.1
type: Protein
SIO_000068: ncbiprotein

position:903628:-1
position: 903628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017848:-1
position: 1017848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1017848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X2
translation: MARSGLRPLASALLRCGLLTAALFSDGLWAEAGAPAAGARPGPANESCSGTSDCKEGVILPIWYPENPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASIEVITSQEREVTVRKPNGETGTATIRVWNETVSNLTLMALGSSAPEILLSLIEVCGHGFAAGDLGPSTIVGSAAFNMFVIVGICVYVIPEGEARRIKHLRVFFVTAAWSVFAYVWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWAADRRLLFPKYAPKRYRADKHRGIVIETEGGPPKGIEMDGKVANDAHFPGGSPGPIDGREADRSRREMIHILKDLKQKHPDKDLDQLVELANYHALSHQQKSRAFYRIQATRLMTGAGNVLKKHAAEQAKKASGLSEVRPEEPEDPKVSKVFFDPCSYQCLENCGAVLLTVVRRGGDPSETLYVDYKTEDGSANAGADYEFTEGTVVLKPGETRKEFSVGIIDDDIFEEDEHFFVRLSNVRLAEEPLGDGPPPAPRAALASPCMATVTILDDDHAGIFTFERDLVRVSESVGIMDVQVLRTSGARGTVLVPFRTLEGSAKGGGQDFEDTYGELEFKNDETVKTVRVKIVDEEEYERQENFFIALGEPKWMERGISALLLSPDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906482,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017848))
location: region:903628-1017848:-1
so has part: feature:1016080-1017848:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906482:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1017848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906210-906482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X1
translation: MARSGLRPLASALLRCGLLTAALFSDGLWAEAGAPAAGARPGPANESCSGTSDCKEGVILPIWYPENPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASIEVITSQEREVTVRKPNGETGTATIRVWNETVSNLTLMALGSSAPEILLSLIEVCGHGFAAGDLGPSTIVGSAAFNMFVIVGICVYVIPEGEARRIKHLRVFFVTAAWSVFAYVWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWAADRRLLFPKYAPKRYRADKHRGIVIETEGGPPKGIEMDGKVANDAHFPGGSPGPIDGREADRSRREMIHILKDLKQKHPDKDLDQLVELANYHALSHQQKSRAFYRIQATRLMTGAGNVLKKHAAEQAKKASGLSEVRPEEPEDPKVSKVFFDPCSYQCLENCGAVLLTVVRRGGDPSETLYVDYKTEDGSANAGADYEFTEGTVVLKPGETRKEFSVGIIDDDIFEEDEHFFVRLSNVRLAEEPLGDGPPPAPRAALASPCMATVTILDDDHAGIFTFERDLVRVSESVGIMDVQVLRTSGARGTVLVPFRTLEGSAKGGGQDFEDTYGELEFKNDETVKTVRVKIVDEEEYERQENFFIALGEPKWMERGISALLLSPDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017848))
location: region:903628-1017848:-1
so has part: feature:1016080-1017848:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1017848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X1
translation: MARSGLRPLASALLRCGLLTAALFSDGLWAEAGAPAAGARPGPANESCSGTSDCKEGVILPIWYPENPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASIEVITSQEREVTVRKPNGETGTATIRVWNETVSNLTLMALGSSAPEILLSLIEVCGHGFAAGDLGPSTIVGSAAFNMFVIVGICVYVIPEGEARRIKHLRVFFVTAAWSVFAYVWLYMILAVFSPGVVQVWEGLLTLFFFPVCVLLAWAADRRLLFPKYAPKRYRADKHRGIVIETEGGPPKGIEMDGKVANDAHFPGGSPGPIDGREADRSRREMIHILKDLKQKHPDKDLDQLVELANYHALSHQQKSRAFYRIQATRLMTGAGNVLKKHAAEQAKKASGLSEVRPEEPEDPKVSKVFFDPCSYQCLENCGAVLLTVVRRGGDPSETLYVDYKTEDGSANAGADYEFTEGTVVLKPGETRKEFSVGIIDDDIFEEDEHFFVRLSNVRLAEEPLGDGPPPAPRAALASPCMATVTILDDDHAGIFTFERDLVRVSESVGIMDVQVLRTSGARGTVLVPFRTLEGSAKGGGQDFEDTYGELEFKNDETVKTVRVKIVDEEEYERQENFFIALGEPKWMERGISALLLSPDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927180,1016080..1017848))
location: region:903628-1017848:-1
so has part: feature:1016080-1017848:-1:exon
so has part: feature:927077-927180:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1017848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927077-927180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X6
translation: MESWSSRMMKPYMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,1016080..1016113))
location: region:903628-1016113:-1
so has part: feature:1016080-1016113:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621807.1
type: Protein
SIO_000068: ncbiprotein

position:1016113:-1
position: 1016113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016080-1016113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X4
translation: MGPRMVDMSLQKALLLSPDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,918438..918455,932475..932511))
location: region:903628-932511:-1
so has part: feature:932475-932511:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621805.1
type: Protein
SIO_000068: ncbiprotein

position:932511:-1
position: 932511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932475-932511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903628-904004:-1:exon

SLC8A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC8A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 3 isoform X5
translation: MERGISALLLSPDMADRKLTTEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAAIQDIYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALRGQEFRVSAGTLAFSVTLFTIFAFVCISVLLYRRRPQLGGELGGPRGCRLATTALFISLWLLYILFATLEAYCYIKGF
SIO_010081: SLC8A3
subclass of: SO_0000673
so part of: SLC8A3
location: complement(join(903628..904004,906210..906485,911839..911938,912646..912770,918438..918455,927077..927095))
location: region:903628-927095:-1
so has part: feature:927077-927095:-1:exon
so has part: feature:918438-918455:-1:exon
so has part: feature:912646-912770:-1:exon
so has part: feature:911839-911938:-1:exon
so has part: feature:906210-906485:-1:exon
so has part: feature:903628-904004:-1:exon

XP_038621806.1
type: Protein
SIO_000068: ncbiprotein

position:927095:-1
position: 927095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927077-927095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918438-918455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912646-912770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911839-911938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906210-906485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903628-904004:-1:exon

LOC119944515
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1158724..1213090)
location: region:1158724-1213090:-1
so has part: feature:1158724-1213090:-1:exon
subclass of: SO_0000010

119944515
type: Gene
SIO_000068: ncbigene

position:1158724:-1
position: 1158724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213090:-1
position: 1213090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158724-1213090:-1:exon

LOC119944515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944515
product: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765464.1
SIO_010081: LOC119944515
subclass of: SO_0000673
so part of: LOC119944515
location: complement(join(1158724..1159073,1173925..1173987,1204885..1204956,1212970..1213090))
location: region:1158724-1213090:-1
so has part: feature:1212970-1213090:-1:exon
so has part: feature:1204885-1204956:-1:exon
so has part: feature:1173925-1173987:-1:exon
so has part: feature:1158724-1159073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212970-1213090:-1:exon

position:1212970:-1
position: 1212970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204885-1204956:-1:exon

position:1204885:-1
position: 1204885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204956:-1
position: 1204956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1173925-1173987:-1:exon

position:1173925:-1
position: 1173925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173987:-1
position: 1173987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1158724-1159073:-1:exon

position:1159073:-1
position: 1159073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119944515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like
translation: MVPPAAVLRALRRNKTLRYGLPMMVLIVGGSFGLREFSQIRYDAVKCKIDPELEEKLKRNKVSLESEYEKIKDSSFDDWKNIRGPRPWEDPNLLQGRTAESLRAKPA
SIO_010081: LOC119944515
subclass of: SO_0000673
so part of: LOC119944515
location: complement(join(1158957..1159073,1173925..1173987,1204885..1204956,1212970..1213041))
location: region:1158957-1213041:-1
so has part: feature:1212970-1213041:-1:exon
so has part: feature:1204885-1204956:-1:exon
so has part: feature:1173925-1173987:-1:exon
so has part: feature:1158957-1159073:-1:exon

XP_038621392.1
type: Protein
SIO_000068: ncbiprotein

position:1158957:-1
position: 1158957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213041:-1
position: 1213041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212970-1213041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204885-1204956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173925-1173987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1158957-1159073:-1:exon

LOC119944513
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1227363..1307280)
location: region:1227363-1307280:-1
so has part: feature:1227363-1307280:-1:exon
subclass of: SO_0000010

119944513
type: Gene
SIO_000068: ncbigene

position:1227363:-1
position: 1227363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307280:-1
position: 1307280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227363-1307280:-1:exon

LOC119944513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944513
product: deubiquitinase DESI2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765462.1
SIO_010081: LOC119944513
subclass of: SO_0000673
so part of: LOC119944513
location: complement(join(1227363..1228473,1243309..1243450,1247755..1247848,1250224..1250296,1307156..1307280))
location: region:1227363-1307280:-1
so has part: feature:1307156-1307280:-1:exon
so has part: feature:1250224-1250296:-1:exon
so has part: feature:1247755-1247848:-1:exon
so has part: feature:1243309-1243450:-1:exon
so has part: feature:1227363-1228473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1307156-1307280:-1:exon

position:1307156:-1
position: 1307156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250224-1250296:-1:exon

position:1250224:-1
position: 1250224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250296:-1
position: 1250296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1247755-1247848:-1:exon

position:1247755:-1
position: 1247755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247848:-1
position: 1247848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1243309-1243450:-1:exon

position:1243309:-1
position: 1243309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243450:-1
position: 1243450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1227363-1228473:-1:exon

position:1228473:-1
position: 1228473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119944513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deubiquitinase DESI2-like
translation: MANQPVILNVYDMYWINEYTSTLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGSAVELGETFKFKEAIALGSTDFTEEDVDKIVEELGKEYKGNAYHLMHKNCNHFSDALAEILCGRETPRWVNRLAYFSSCIPFLQSCLPREWLTPAALQTHISLGLQKDPAAAMAAEQGEAAGHDTSTASGSSRPCRHTRV
SIO_010081: LOC119944513
subclass of: SO_0000673
so part of: LOC119944513
location: complement(join(1228228..1228473,1243309..1243450,1247755..1247848,1250224..1250296,1307156..1307194))
location: region:1228228-1307194:-1
so has part: feature:1307156-1307194:-1:exon
so has part: feature:1250224-1250296:-1:exon
so has part: feature:1247755-1247848:-1:exon
so has part: feature:1243309-1243450:-1:exon
so has part: feature:1228228-1228473:-1:exon

XP_038621390.1
type: Protein
SIO_000068: ncbiprotein

position:1228228:-1
position: 1228228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307194:-1
position: 1307194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307156-1307194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250224-1250296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1247755-1247848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243309-1243450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228228-1228473:-1:exon

LOC119944952
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944952
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1320559..1320696)
location: region:1320559-1320696:-1
so has part: feature:1320559-1320696:-1:exon
subclass of: SO_0000578

119944952
type: Gene
SIO_000068: ncbigene

position:1320559:-1
position: 1320559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320696:-1
position: 1320696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320559-1320696:-1:exon

LOC119944952
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944952
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456091.1
SIO_010081: LOC119944952
subclass of: SO_0000673
so part of: LOC119944952
location: complement(1320559..1320696)
location: region:1320559-1320696:-1
so has part: feature:1320559-1320696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1320559-1320696:-1:exon

LOC119944514
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1341747..1370743)
location: region:1341747-1370743:-1
so has part: feature:1341747-1370743:-1:exon
subclass of: SO_0000010

119944514
type: Gene
SIO_000068: ncbigene

position:1341747:-1
position: 1341747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370743:-1
position: 1370743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341747-1370743:-1:exon

LOC119944514
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944514
product: synaptojanin 2 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765463.1
SIO_010081: LOC119944514
subclass of: SO_0000673
so part of: LOC119944514
location: complement(join(1341747..1344732,1347157..1347252,1350707..1350843,1370593..1370743))
location: region:1341747-1370743:-1
so has part: feature:1370593-1370743:-1:exon
so has part: feature:1350707-1350843:-1:exon
so has part: feature:1347157-1347252:-1:exon
so has part: feature:1341747-1344732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370593-1370743:-1:exon

position:1370593:-1
position: 1370593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1350707-1350843:-1:exon

position:1350707:-1
position: 1350707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350843:-1
position: 1350843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1347157-1347252:-1:exon

position:1347157:-1
position: 1347157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347252:-1
position: 1347252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1341747-1344732:-1:exon

position:1344732:-1
position: 1344732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119944514
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-2-binding protein
translation: MNGRADYLLTEEEIHLTRGPAGLGFNIVGGTDQQFMPSDSGIFVSRIKENGAAALDGRLQEGDKVLAVNGKDLKNLLHQDAVDLFRNAGYAVSLKVQRKLQVQNGPVNHRGDGDPRGLPLAAVLVPALALAALATWAFIRSRQRL
SIO_010081: LOC119944514
subclass of: SO_0000673
so part of: LOC119944514
location: complement(join(1344592..1344732,1347157..1347252,1350707..1350843,1370593..1370656))
location: region:1344592-1370656:-1
so has part: feature:1370593-1370656:-1:exon
so has part: feature:1350707-1350843:-1:exon
so has part: feature:1347157-1347252:-1:exon
so has part: feature:1344592-1344732:-1:exon

XP_038621391.1
type: Protein
SIO_000068: ncbiprotein

position:1344592:-1
position: 1344592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370656:-1
position: 1370656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370593-1370656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1350707-1350843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1347157-1347252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1344592-1344732:-1:exon

LOC119944512
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1383988..1386598)
location: region:1383988-1386598:-1
so has part: feature:1383988-1386598:-1:exon
subclass of: SO_0000010

119944512
type: Gene
SIO_000068: ncbigene

position:1383988:-1
position: 1383988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386598:-1
position: 1386598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383988-1386598:-1:exon

LOC119944512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944512
product: disintegrin and metalloproteinase domain-containing protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765461.1
SIO_010081: LOC119944512
subclass of: SO_0000673
so part of: LOC119944512
location: complement(1383988..1386598)
location: region:1383988-1386598:-1
so has part: feature:1383988-1386598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383988-1386598:-1:exon

LOC119944512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 20-like
translation: MGGAGVPGRLLLRALLVLLGLRTLLPARSARPEAVVVVPRRVTPRGRAGEADVPGALSYVLPVDGQSRLLHLRPKKLLLAPRLPVFTYTDRGALTVDQPFVPDDCYYHGFVEGTPESLVALSTCTGGLRGMLQLGPLVYEIEPLPASAGFEHALSRTGAGEAGPETPGLWCGVTEEEIRRQASEMQGKAAPEPTESPDDDRRWTHSRFLELAVVVDNTRFVLSGKNQSRVLRQVLDVLNLVDTLYRLLDVRVYLVGLEIWTDGNRVDVTRSIGKVLADFNAWQRGHLLPRFSYDSAHLIVNQQYGITLGLAYVKTICNNHYASAVLSFFDYHLLKFAVVFAHEQGHIFGMTHDTAGCVCKRDKCIMSEFTADTDVFSNCSYREFFDATSRQGKCLTNVPGPAALVTVERCGNRVLEGGEECDCGTVGECREDPCCQSNCRLRPGATCSVGGCCERCRTLPAGQLCRPQAGDCDLPEYCDGVSARCPGDVYMLDGTPCQEDALCFDNVCHGHNRQCRSVFGPGARSASAGCFRTVNMEGDRFGNCGMGRDGYLKCAEDHVLCGRLQCENVREIPRLEEHTTVLQTLFNGTVCWGTDYHFGMNVVDVGHVRDGTMCGPRKMCLARKCVDISALRHDCNPATCHGRGVCNNHQHCHCMYGWEPPLCDVHGFGGSVDSGPAPAKLQNHLYILLIVLGICFLLLVSVILLCMKFGPRFVPGVIQRSRRKKRDPQAEPSQDKTVPSQASFEEEGGPSRP
SIO_010081: LOC119944512
subclass of: SO_0000673
so part of: LOC119944512
location: complement(1384337..1386598)
location: region:1384337-1386598:-1
so has part: feature:1384337-1386598:-1:exon

XP_038621389.1
type: Protein
SIO_000068: ncbiprotein

position:1384337:-1
position: 1384337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384337-1386598:-1:exon

LOC119944486
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1391585..1400616
location: region:1391585-1400616:1
so has part: feature:1391585-1400616:1:exon
subclass of: SO_0000010

119944486
type: Gene
SIO_000068: ncbigene

position:1391585:1
position: 1391585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400616:1
position: 1400616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391585-1400616:1:exon

LOC119944486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944486
product: disintegrin and metalloproteinase domain-containing protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765429.1
SIO_010081: LOC119944486
subclass of: SO_0000673
so part of: LOC119944486
location: join(1391585..1391660,1393181..1393222,1393989..1394023,1397274..1397470,1397571..1397584,1397721..1397978,1398066..1400616)
location: region:1391585-1400616:1
so has part: feature:1391585-1391660:1:exon
so has part: feature:1393181-1393222:1:exon
so has part: feature:1393989-1394023:1:exon
so has part: feature:1397274-1397470:1:exon
so has part: feature:1397571-1397584:1:exon
so has part: feature:1397721-1397978:1:exon
so has part: feature:1398066-1400616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1391585-1391660:1:exon

position:1391660:1
position: 1391660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393181-1393222:1:exon

position:1393181:1
position: 1393181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393222:1
position: 1393222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1393989-1394023:1:exon

position:1393989:1
position: 1393989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394023:1
position: 1394023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1397274-1397470:1:exon

position:1397274:1
position: 1397274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397470:1
position: 1397470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1397571-1397584:1:exon

position:1397571:1
position: 1397571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397584:1
position: 1397584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1397721-1397978:1:exon

position:1397721:1
position: 1397721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397978:1
position: 1397978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1398066-1400616:1:exon

position:1398066:1
position: 1398066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119944486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 20-like
translation: MPKHTVSSFALSHMDGRETCQGRYLEELNKISVEEIQLSGVVVRKMQGFQQRPPSLPPCLPPSPNPADDYCPLLPVLKAGGPVSSKRPHPTPPPFRSSPRPVGAAGPGSLRCPPSARSWRSGPAPVSGSPPCPPAPPSLCPVPPPRLRNRFPHPVRAPARAARATAAGAVLTGPAPRPGPGPWPRPALGPGPGPPDRRPRPAPPAGSGQGTRPPPPPALPPPRPPRPGWRLASSEVVVPRRVTPRGQGAHPPGALSYHLYLDGQSRLLHLRPKKLLLAPRLPVFTYTDRGALTVDQPFVPDDCYYHGFVEGTPGSLVALSTCAGGLRGMLQLGPLVYEIEPLPASAGFEHVVSRVEEEEEEEEDDEDRGEDGDGEREGAAGGTPRRRCGLSEEELALQAGGPAGPRARAGPADDWWTHSRHVEFVVVVDHLRFQHTQRNRSRVLHEVLQVVNMMDSLYRPLGAFVYLTGLEIWTDRNQLDVTTGIESLLLAFAEWKNRNLYERLPHDAAHLFVKHEYGQFLGKAFVGTICDRMLSAGIDAFFDDRLMEFAITVAHELGHNFGMLHDLPYCDCAQAKCIMDAFPATANAFSNCSYARYVDLTSQPQTRCVLGPPDERLVIAPQRCGNGLVEEDEDCDCGSAEECRRDPCCREGCRLRPEAECAYGPCCQDCRVASSGRLCRPPVDACDLPEYCNGTSHWCQEDVYMQDGTPCSETAFCFESFCRDRLARCRAVFGPEARDAPPDCYRDVNAVGDRFGNCGRGREAYRRCEEDHVLCGRLQCAEVRRIPPLEHDATVVQTAVNGTLCFGIDHHEGLERPDVGAVQNGSVCGPGRICFDRRCVNYSVLRYDCREEKCNFKGICNNKGHCHCLYGWSPPFCLEKGYGGSVDSGPSPQVFSLTDTLIALGVVLLCLLLLLLLLCVVCSKGLKRLAPLKKRARESRQALAPDWDPSPEAKPGPATRAPPPGTRAPPQETGAPLQETRAPPQETRAPPPETRSPPPETQSPPPETRAPPWDGTALRPPQGPCDAPRSRAP
SIO_010081: LOC119944486
subclass of: SO_0000673
so part of: LOC119944486
location: join(1391585..1391660,1393181..1393222,1393989..1394023,1397274..1397470,1397571..1397584,1397721..1397978,1398066..1400545)
location: region:1391585-1400545:1
so has part: feature:1391585-1391660:1:exon
so has part: feature:1393181-1393222:1:exon
so has part: feature:1393989-1394023:1:exon
so has part: feature:1397274-1397470:1:exon
so has part: feature:1397571-1397584:1:exon
so has part: feature:1397721-1397978:1:exon
so has part: feature:1398066-1400545:1:exon

XP_038621357.1
type: Protein
SIO_000068: ncbiprotein

position:1400545:1
position: 1400545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391585-1391660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393181-1393222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1393989-1394023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397274-1397470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397571-1397584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1397721-1397978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1398066-1400545:1:exon

LOC119944734
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1407422..1410094)
location: region:1407422-1410094:-1
so has part: feature:1407422-1410094:-1:exon
subclass of: SO_0000010

119944734
type: Gene
SIO_000068: ncbigene

position:1407422:-1
position: 1407422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410094:-1
position: 1410094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407422-1410094:-1:exon

LOC119944734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944734
product: disintegrin and metalloproteinase domain-containing protein 21-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765842.1
SIO_010081: LOC119944734
subclass of: SO_0000673
so part of: LOC119944734
location: complement(1407422..1410094)
location: region:1407422-1410094:-1
so has part: feature:1407422-1410094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407422-1410094:-1:exon

LOC119944734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 21-like
translation: MGGAGVPGRLLLRALLVLLGLRTPPPARSARPEAVVVVVPRKVTPRGRAGEADVPGALSYVLPVDGQSRLLHLRPKKLLLAPRLPVFTYTDRGALTVDQPFVPDDCYYHGFVEGTPESLVALSTCAGGLRGMLQLGPLVYEIEPLPASAGFEHVLSRTRAGEPSPMKCGLTDDRLRSLRFPGRRDGNVTPRQGPTDGWWTHSRFLELAVVVDHGRFVYSRRNVTKVQEDVVNVVNVVDSLYRLLNLKISLVGIEIWTQRNLVDTGASLYDVLTDFSLWKLDRLYDRLPHDCAHLLVGRRFSDLVGLAFVGGICDPRAGSAVEAFTRDQLLPLARTVAHELGHNLGMVHDAGSCSCRRKLCIMHAFLSDAGVFSNCSYREYFSTITQGGLCLLDAPPAKALFRLERCGNRAVERGEQCDCGTPTECKWDLCCRTDCRLKAGADCASGPCCSACKIAPAGKLCRPQASECDLPEWCDGTSAGCPEDVFKQDGTPCGRDARCYRRRCGDRDGQCRALFGPEARGGPRACYEEVNTRGDRFGHCGLQNWHYHKCRGDDVLCGRVQCQDVRRLPVLADHTTVVQTALDGVTCWGTDYHVGMGGADVGDVKDGSACGPGTICIGGRCVGLSALRYDCEAERCHSRGVCNSKRHCHCHFGWAPPRCATRGFGGSIDSGPAAPDRLLPTICLILYTLAVFALFFFGTVFHPSLRMPLGPRPGRGDRGREAGRPGWRSYLGRVVRL
SIO_010081: LOC119944734
subclass of: SO_0000673
so part of: LOC119944734
location: complement(1407881..1410094)
location: region:1407881-1410094:-1
so has part: feature:1407881-1410094:-1:exon

XP_038621770.1
type: Protein
SIO_000068: ncbiprotein

position:1407881:-1
position: 1407881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407881-1410094:-1:exon

MED6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1419773..1449986)
location: region:1419773-1449986:-1
so has part: feature:1419773-1449986:-1:exon
subclass of: SO_0000010

119944612
type: Gene
SIO_000068: ncbigene

position:1419773:-1
position: 1419773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449986:-1
position: 1449986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419773-1449986:-1:exon

MED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MED6
product: mediator complex subunit 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765633.1
SIO_010081: MED6
subclass of: SO_0000673
so part of: MED6
location: complement(join(1419773..1420133,1421313..1421340,1425067..1425175,1428669..1428751,1438938..1439029,1440921..1441080,1449935..1449986))
location: region:1419773-1449986:-1
so has part: feature:1449935-1449986:-1:exon
so has part: feature:1440921-1441080:-1:exon
so has part: feature:1438938-1439029:-1:exon
so has part: feature:1428669-1428751:-1:exon
so has part: feature:1425067-1425175:-1:exon
so has part: feature:1421313-1421340:-1:exon
so has part: feature:1419773-1420133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1449935-1449986:-1:exon

position:1449935:-1
position: 1449935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1440921-1441080:-1:exon

position:1440921:-1
position: 1440921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441080:-1
position: 1441080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438938-1439029:-1:exon

position:1438938:-1
position: 1438938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439029:-1
position: 1439029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428669-1428751:-1:exon

position:1428669:-1
position: 1428669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428751:-1
position: 1428751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1425067-1425175:-1:exon

position:1425067:-1
position: 1425067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425175:-1
position: 1425175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1421313-1421340:-1:exon

position:1421313:-1
position: 1421313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421340:-1
position: 1421340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1419773-1420133:-1:exon

position:1420133:-1
position: 1420133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MED6
product: mediator complex subunit 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765632.1
SIO_010081: MED6
subclass of: SO_0000673
so part of: MED6
location: complement(join(1419918..1420133,1421313..1421340,1422230..1422345,1425067..1425175,1428669..1428751,1438938..1439029,1440921..1441080,1449935..1449986))
location: region:1419918-1449986:-1
so has part: feature:1449935-1449986:-1:exon
so has part: feature:1440921-1441080:-1:exon
so has part: feature:1438938-1439029:-1:exon
so has part: feature:1428669-1428751:-1:exon
so has part: feature:1425067-1425175:-1:exon
so has part: feature:1422230-1422345:-1:exon
so has part: feature:1421313-1421340:-1:exon
so has part: feature:1419918-1420133:-1:exon

position:1419918:-1
position: 1419918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449935-1449986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440921-1441080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438938-1439029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428669-1428751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425067-1425175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1422230-1422345:-1:exon

position:1422230:-1
position: 1422230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422345:-1
position: 1422345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1421313-1421340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419918-1420133:-1:exon

MED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 6 isoform X2
translation: MAAVDIRDNLLGISWVDSSWIPILNSGSVLDYFSERSNPFYDRMCNNEVVKMQRLTLEHLNQMVGVEYILLHAQEPILFIIRKQQRQSSSQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSAFDEAMSYCRYHPSKGYWWHFRDQEEQAKVGRKARPSGTDQEGAGTRARNAESRGEGDPQKRPADGRPQRTPGEKAAAAVRPDGWIASPGGPAGGPETLHPSIMSP
SIO_010081: MED6
subclass of: SO_0000673
so part of: MED6
location: complement(join(1419923..1420133,1421313..1421340,1425067..1425175,1428669..1428751,1438938..1439029,1440921..1441080,1449935..1449956))
location: region:1419923-1449956:-1
so has part: feature:1449935-1449956:-1:exon
so has part: feature:1440921-1441080:-1:exon
so has part: feature:1438938-1439029:-1:exon
so has part: feature:1428669-1428751:-1:exon
so has part: feature:1425067-1425175:-1:exon
so has part: feature:1421313-1421340:-1:exon
so has part: feature:1419923-1420133:-1:exon

XP_038621561.1
type: Protein
SIO_000068: ncbiprotein

position:1419923:-1
position: 1419923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449956:-1
position: 1449956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449935-1449956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440921-1441080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438938-1439029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428669-1428751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425067-1425175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421313-1421340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1419923-1420133:-1:exon

MED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 6 isoform X1
translation: MAAVDIRDNLLGISWVDSSWIPILNSGSVLDYFSERSNPFYDRMCNNEVVKMQRLTLEHLNQMVGVEYILLHAQEPILFIIRKQQRQSSSQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSAFDEAMSYCRYHPSKGYWWHFRDQEEQDKAKPKAKRKEEPSSIFQRQRVDALLLDLRHKFPPRYVQQKLGEKPVPVEQTKKEPEPAPETLKAEEKETPKNAQQTAGPKGPPEKRLRLQ
SIO_010081: MED6
subclass of: SO_0000673
so part of: MED6
location: complement(join(1420003..1420133,1421313..1421340,1422230..1422345,1425067..1425175,1428669..1428751,1438938..1439029,1440921..1441080,1449935..1449956))
location: region:1420003-1449956:-1
so has part: feature:1449935-1449956:-1:exon
so has part: feature:1440921-1441080:-1:exon
so has part: feature:1438938-1439029:-1:exon
so has part: feature:1428669-1428751:-1:exon
so has part: feature:1425067-1425175:-1:exon
so has part: feature:1422230-1422345:-1:exon
so has part: feature:1421313-1421340:-1:exon
so has part: feature:1420003-1420133:-1:exon

XP_038621560.1
type: Protein
SIO_000068: ncbiprotein

position:1420003:-1
position: 1420003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449935-1449956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440921-1441080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438938-1439029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428669-1428751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425067-1425175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1422230-1422345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1421313-1421340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1420003-1420133:-1:exon

LOC119944958
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944958
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1502900..1503037
location: region:1502900-1503037:1
so has part: feature:1502900-1503037:1:exon
subclass of: SO_0000578

119944958
type: Gene
SIO_000068: ncbigene

position:1502900:1
position: 1502900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503037:1
position: 1503037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502900-1503037:1:exon

LOC119944958
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944958
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456096.1
SIO_010081: LOC119944958
subclass of: SO_0000673
so part of: LOC119944958
location: 1502900..1503037
location: region:1502900-1503037:1
so has part: feature:1502900-1503037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1502900-1503037:1:exon

TTC9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TTC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1508507..1547469
location: region:1508507-1547469:1
so has part: feature:1508507-1547469:1:exon
subclass of: SO_0000010

119944487
type: Gene
SIO_000068: ncbigene

position:1508507:1
position: 1508507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547469:1
position: 1547469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508507-1547469:1:exon

TTC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TTC9
product: tetratricopeptide repeat domain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765431.1
SIO_010081: TTC9
subclass of: SO_0000673
so part of: TTC9
location: join(1508507..1508723,1534920..1535102,1546546..1547469)
location: region:1508507-1547469:1
so has part: feature:1508507-1508723:1:exon
so has part: feature:1534920-1535102:1:exon
so has part: feature:1546546-1547469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1508507-1508723:1:exon

position:1508723:1
position: 1508723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1534920-1535102:1:exon

position:1534920:1
position: 1534920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535102:1
position: 1535102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546546-1547469:1:exon

position:1546546:1
position: 1546546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TTC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 9A
translation: MVIQRAQDFKSQGAQCYKDKKFREAIGKYHRALLELKGLPDHPRTPGTPATPAHRQAQIVEAIEVDCYNSLAACLLQAELVNYERVKDYCLKVLKKEGENFKALYRSGVAFYHLGDFDKALHYLKEARYRQPTDTNVIRYIQLTEMKLSRCSQREKEAS
SIO_010081: TTC9
subclass of: SO_0000673
so part of: TTC9
location: join(1508507..1508723,1534920..1535102,1546546..1546625)
location: region:1508507-1546625:1
so has part: feature:1508507-1508723:1:exon
so has part: feature:1534920-1535102:1:exon
so has part: feature:1546546-1546625:1:exon

XP_038621359.1
type: Protein
SIO_000068: ncbiprotein

position:1546625:1
position: 1546625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508507-1508723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534920-1535102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546546-1546625:1:exon

MAP3K9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MAP3K9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1591525..1664287)
location: region:1591525-1664287:-1
so has part: feature:1591525-1664287:-1:exon
subclass of: SO_0000010

119944610
type: Gene
SIO_000068: ncbigene

position:1591525:-1
position: 1591525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664287:-1
position: 1664287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591525-1664287:-1:exon

MAP3K9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAP3K9
product: mitogen-activated protein kinase kinase kinase 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765630.1
SIO_010081: MAP3K9
subclass of: SO_0000673
so part of: MAP3K9
location: complement(join(1591525..1592054,1593017..1593754,1598640..1598752,1600628..1600781,1604814..1604934,1611101..1611341,1615618..1615793,1617585..1617733,1624248..1624428,1647244..1647658,1663915..1664287))
location: region:1591525-1664287:-1
so has part: feature:1663915-1664287:-1:exon
so has part: feature:1647244-1647658:-1:exon
so has part: feature:1624248-1624428:-1:exon
so has part: feature:1617585-1617733:-1:exon
so has part: feature:1615618-1615793:-1:exon
so has part: feature:1611101-1611341:-1:exon
so has part: feature:1604814-1604934:-1:exon
so has part: feature:1600628-1600781:-1:exon
so has part: feature:1598640-1598752:-1:exon
so has part: feature:1593017-1593754:-1:exon
so has part: feature:1591525-1592054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1663915-1664287:-1:exon

position:1663915:-1
position: 1663915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647244-1647658:-1:exon

position:1647244:-1
position: 1647244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647658:-1
position: 1647658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1624248-1624428:-1:exon

position:1624248:-1
position: 1624248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624428:-1
position: 1624428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1617585-1617733:-1:exon

position:1617585:-1
position: 1617585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617733:-1
position: 1617733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1615618-1615793:-1:exon

position:1615618:-1
position: 1615618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615793:-1
position: 1615793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1611101-1611341:-1:exon

position:1611101:-1
position: 1611101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611341:-1
position: 1611341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1604814-1604934:-1:exon

position:1604814:-1
position: 1604814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604934:-1
position: 1604934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1600628-1600781:-1:exon

position:1600628:-1
position: 1600628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600781:-1
position: 1600781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1598640-1598752:-1:exon

position:1598640:-1
position: 1598640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598752:-1
position: 1598752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1593017-1593754:-1:exon

position:1593017:-1
position: 1593017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593754:-1
position: 1593754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1591525-1592054:-1:exon

position:1592054:-1
position: 1592054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP3K9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAP3K9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 9
translation: MEPSRALLGCQAGAAGPGPGPAGEEEEEEDDDEEEEEEDEEEEGEDGGEERALWTAVLEYEAAGGSALEALAQHPARGSGDQGWWTGPLPRRLPLFPTHYGTPAAAAAAAAAAAEGLAPHNDVHLLEIDFAELTLEEIIGIGGFGKVYRAFWVGEEVAVKAARHDPDEDLRQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGSLNRVLSGKRIPPNILVNWAVQIARGMNYLHEKAVVPIIHRDLKSSNILILEKVDSSHLGNKTLKITDFGLAREWHKTTKMSAAGTYAWMAPEVIRSSMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPQPFAQLMEDCWKADPHSRPSFTSILDRLTTIEESGFFEMPKDSFHCLQDDWKHEVQEMFDQLRAKEKELRTWEEELSEAALQQKLQEEELQRREQELAEREIHVLERELHVFIHQLAHHQPPVHKRKGHFAKSRLKLKDGNRISLPSDFQHKFTVQASPTLDKRKSLPDGSSXPPVSPTVLPRLRAIQLTPGESSKTWGQSSVVPKEDGKEEEKRGPKKKGRTWGPSTLCQKEITAANESPKSLVDGTKHWASSAPNLGKSPRMPPILPGFTSLTEMEDEAGEDRPYPSPSQAYLCLPSPRGEDGAAPPADGAPEEPTPVNSASSTPQLTPTNSLKRGGGPQWRRCGAAVVGCGAVLAAPGLGLDLLEAGRCQLPPTEEPSPLPREDRKKREGLFQRAARPRRLFGKEEAGGLAAGDPSPPLLSPASLSECNSTRSLLRSDSDDALAEEPAPAAPRAPRPAHPLVNVRVERFKRDPRQSLTPTHVTLSSPAPPRGHHRRTPSDGALKSPALANGSPSASGPGAGSAATPSPARDPSEVPRLPDPNLVFPPTPRRWTSPPDPTLERPKTLEFAPRPRPSAHRQRLDPWWSASPGPGPGLAHSTSPAPLSSTGTPGPGDPCLASSGGGSGGLPALLRLQPGGLVPPARTLLDLDAEGQSQDGTVPLCRAALDPHLPPPFELQREFWS
SIO_010081: MAP3K9
subclass of: SO_0000673
so part of: MAP3K9
location: complement(join(1591566..1592054,1593017..1593754,1598640..1598752,1600628..1600781,1604814..1604934,1611101..1611341,1615618..1615793,1617585..1617733,1624248..1624428,1647244..1647658,1663915..1664287))
location: region:1591566-1664287:-1
so has part: feature:1663915-1664287:-1:exon
so has part: feature:1647244-1647658:-1:exon
so has part: feature:1624248-1624428:-1:exon
so has part: feature:1617585-1617733:-1:exon
so has part: feature:1615618-1615793:-1:exon
so has part: feature:1611101-1611341:-1:exon
so has part: feature:1604814-1604934:-1:exon
so has part: feature:1600628-1600781:-1:exon
so has part: feature:1598640-1598752:-1:exon
so has part: feature:1593017-1593754:-1:exon
so has part: feature:1591566-1592054:-1:exon

XP_038621558.1
type: Protein
SIO_000068: ncbiprotein

position:1591566:-1
position: 1591566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663915-1664287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647244-1647658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1624248-1624428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617585-1617733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1615618-1615793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1611101-1611341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1604814-1604934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1600628-1600781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1598640-1598752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1593017-1593754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1591566-1592054:-1:exon

LOC119944989
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944989
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1665891..1666028)
location: region:1665891-1666028:-1
so has part: feature:1665891-1666028:-1:exon
subclass of: SO_0000578

119944989
type: Gene
SIO_000068: ncbigene

position:1665891:-1
position: 1665891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666028:-1
position: 1666028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1665891-1666028:-1:exon

LOC119944989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944989
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456125.1
SIO_010081: LOC119944989
subclass of: SO_0000673
so part of: LOC119944989
location: complement(1665891..1666028)
location: region:1665891-1666028:-1
so has part: feature:1665891-1666028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1665891-1666028:-1:exon

LOC119944943
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944943
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1702312..1702449)
location: region:1702312-1702449:-1
so has part: feature:1702312-1702449:-1:exon
subclass of: SO_0000578

119944943
type: Gene
SIO_000068: ncbigene

position:1702312:-1
position: 1702312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702449:-1
position: 1702449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702312-1702449:-1:exon

LOC119944943
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944943
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456082.1
SIO_010081: LOC119944943
subclass of: SO_0000673
so part of: LOC119944943
location: complement(1702312..1702449)
location: region:1702312-1702449:-1
so has part: feature:1702312-1702449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1702312-1702449:-1:exon

LOC119944986
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944986
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1722508..1722611)
location: region:1722508-1722611:-1
so has part: feature:1722508-1722611:-1:exon
subclass of: SO_0000623

119944986
type: Gene
SIO_000068: ncbigene

position:1722508:-1
position: 1722508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722611:-1
position: 1722611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1722508-1722611:-1:exon

LOC119944986
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snRNA
gene: LOC119944986
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456122.1
SIO_010081: LOC119944986
subclass of: SO_0000673
so part of: LOC119944986
location: complement(1722508..1722611)
location: region:1722508-1722611:-1
so has part: feature:1722508-1722611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1722508-1722611:-1:exon

PCNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PCNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1730424..1936063
location: region:1730424-1936063:1
so has part: feature:1730424-1936063:1:exon
subclass of: SO_0000010

119944813
type: Gene
SIO_000068: ncbigene

position:1730424:1
position: 1730424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936063:1
position: 1936063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730424-1936063:1:exon

PCNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCNX1
product: pecanex 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765983.1
SIO_010081: PCNX1
subclass of: SO_0000673
so part of: PCNX1
location: join(1730424..1730576,1771378..1771586,1778567..1778672,1794443..1794488,1796569..1796655,1803997..1805454,1819348..1819480,1855991..1856048,1858040..1858257,1860467..1860620,1861481..1861513,1863729..1863900,1867427..1867537,1871889..1871980,1873986..1874095,1880412..1880517,1883338..1883430,1887999..1888149,1892590..1892731,1895684..1895861,1897290..1897398,1898416..1898545,1900371..1900429,1902004..1902219,1906515..1906768,1908276..1908506,1909468..1909568,1910624..1910774,1916227..1916457,1920279..1920553,1923054..1923259,1925663..1926096,1929597..1929737,1933947..1936063)
location: region:1730424-1936063:1
so has part: feature:1730424-1730576:1:exon
so has part: feature:1771378-1771586:1:exon
so has part: feature:1778567-1778672:1:exon
so has part: feature:1794443-1794488:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1803997-1805454:1:exon
so has part: feature:1819348-1819480:1:exon
so has part: feature:1855991-1856048:1:exon
so has part: feature:1858040-1858257:1:exon
so has part: feature:1860467-1860620:1:exon
so has part: feature:1861481-1861513:1:exon
so has part: feature:1863729-1863900:1:exon
so has part: feature:1867427-1867537:1:exon
so has part: feature:1871889-1871980:1:exon
so has part: feature:1873986-1874095:1:exon
so has part: feature:1880412-1880517:1:exon
so has part: feature:1883338-1883430:1:exon
so has part: feature:1887999-1888149:1:exon
so has part: feature:1892590-1892731:1:exon
so has part: feature:1895684-1895861:1:exon
so has part: feature:1897290-1897398:1:exon
so has part: feature:1898416-1898545:1:exon
so has part: feature:1900371-1900429:1:exon
so has part: feature:1902004-1902219:1:exon
so has part: feature:1906515-1906768:1:exon
so has part: feature:1908276-1908506:1:exon
so has part: feature:1909468-1909568:1:exon
so has part: feature:1910624-1910774:1:exon
so has part: feature:1916227-1916457:1:exon
so has part: feature:1920279-1920553:1:exon
so has part: feature:1923054-1923259:1:exon
so has part: feature:1925663-1926096:1:exon
so has part: feature:1929597-1929737:1:exon
so has part: feature:1933947-1936063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730424-1730576:1:exon

position:1730576:1
position: 1730576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1771378-1771586:1:exon

position:1771378:1
position: 1771378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1771586:1
position: 1771586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1778567-1778672:1:exon

position:1778567:1
position: 1778567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778672:1
position: 1778672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1794443-1794488:1:exon

position:1794443:1
position: 1794443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794488:1
position: 1794488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1796569-1796655:1:exon

position:1796569:1
position: 1796569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796655:1
position: 1796655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1803997-1805454:1:exon

position:1803997:1
position: 1803997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805454:1
position: 1805454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1819348-1819480:1:exon

position:1819348:1
position: 1819348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819480:1
position: 1819480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1855991-1856048:1:exon

position:1855991:1
position: 1855991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1856048:1
position: 1856048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1858040-1858257:1:exon

position:1858040:1
position: 1858040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858257:1
position: 1858257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1860467-1860620:1:exon

position:1860467:1
position: 1860467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860620:1
position: 1860620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1861481-1861513:1:exon

position:1861481:1
position: 1861481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861513:1
position: 1861513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1863729-1863900:1:exon

position:1863729:1
position: 1863729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863900:1
position: 1863900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1867427-1867537:1:exon

position:1867427:1
position: 1867427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867537:1
position: 1867537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1871889-1871980:1:exon

position:1871889:1
position: 1871889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871980:1
position: 1871980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1873986-1874095:1:exon

position:1873986:1
position: 1873986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874095:1
position: 1874095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1880412-1880517:1:exon

position:1880412:1
position: 1880412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880517:1
position: 1880517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1883338-1883430:1:exon

position:1883338:1
position: 1883338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883430:1
position: 1883430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1887999-1888149:1:exon

position:1887999:1
position: 1887999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888149:1
position: 1888149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1892590-1892731:1:exon

position:1892590:1
position: 1892590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892731:1
position: 1892731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1895684-1895861:1:exon

position:1895684:1
position: 1895684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895861:1
position: 1895861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1897290-1897398:1:exon

position:1897290:1
position: 1897290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1897398:1
position: 1897398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1898416-1898545:1:exon

position:1898416:1
position: 1898416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1898545:1
position: 1898545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1900371-1900429:1:exon

position:1900371:1
position: 1900371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900429:1
position: 1900429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1902004-1902219:1:exon

position:1902004:1
position: 1902004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902219:1
position: 1902219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1906515-1906768:1:exon

position:1906515:1
position: 1906515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906768:1
position: 1906768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1908276-1908506:1:exon

position:1908276:1
position: 1908276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1908506:1
position: 1908506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1909468-1909568:1:exon

position:1909468:1
position: 1909468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1909568:1
position: 1909568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1910624-1910774:1:exon

position:1910624:1
position: 1910624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910774:1
position: 1910774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1916227-1916457:1:exon

position:1916227:1
position: 1916227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916457:1
position: 1916457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1920279-1920553:1:exon

position:1920279:1
position: 1920279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920553:1
position: 1920553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1923054-1923259:1:exon

position:1923054:1
position: 1923054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923259:1
position: 1923259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1925663-1926096:1:exon

position:1925663:1
position: 1925663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926096:1
position: 1926096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1929597-1929737:1:exon

position:1929597:1
position: 1929597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1929737:1
position: 1929737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1933947-1936063:1:exon

position:1933947:1
position: 1933947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCNX1
product: pecanex 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765984.1
SIO_010081: PCNX1
subclass of: SO_0000673
so part of: PCNX1
location: join(1730424..1730576,1771378..1771586,1778567..1778672,1794443..1794488,1796569..1796655,1803997..1805454,1853815..1853905,1855991..1856048,1858055..1858257,1860467..1860620,1861481..1861513,1863729..1863900,1867427..1867537,1871889..1871980,1873986..1874095,1880412..1880517,1883338..1883430,1887999..1888149,1892590..1892731,1895684..1895861,1897290..1897398,1898416..1898545,1900371..1900429,1902004..1902219,1906515..1906768,1908276..1908506,1909468..1909568,1910624..1910774,1916227..1916457,1920279..1920553,1923054..1923259,1925663..1926096,1929597..1929737,1933947..1936063)
location: region:1730424-1936063:1
so has part: feature:1730424-1730576:1:exon
so has part: feature:1771378-1771586:1:exon
so has part: feature:1778567-1778672:1:exon
so has part: feature:1794443-1794488:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1803997-1805454:1:exon
so has part: feature:1853815-1853905:1:exon
so has part: feature:1855991-1856048:1:exon
so has part: feature:1858055-1858257:1:exon
so has part: feature:1860467-1860620:1:exon
so has part: feature:1861481-1861513:1:exon
so has part: feature:1863729-1863900:1:exon
so has part: feature:1867427-1867537:1:exon
so has part: feature:1871889-1871980:1:exon
so has part: feature:1873986-1874095:1:exon
so has part: feature:1880412-1880517:1:exon
so has part: feature:1883338-1883430:1:exon
so has part: feature:1887999-1888149:1:exon
so has part: feature:1892590-1892731:1:exon
so has part: feature:1895684-1895861:1:exon
so has part: feature:1897290-1897398:1:exon
so has part: feature:1898416-1898545:1:exon
so has part: feature:1900371-1900429:1:exon
so has part: feature:1902004-1902219:1:exon
so has part: feature:1906515-1906768:1:exon
so has part: feature:1908276-1908506:1:exon
so has part: feature:1909468-1909568:1:exon
so has part: feature:1910624-1910774:1:exon
so has part: feature:1916227-1916457:1:exon
so has part: feature:1920279-1920553:1:exon
so has part: feature:1923054-1923259:1:exon
so has part: feature:1925663-1926096:1:exon
so has part: feature:1929597-1929737:1:exon
so has part: feature:1933947-1936063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730424-1730576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1771378-1771586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1778567-1778672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794443-1794488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1803997-1805454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853815-1853905:1:exon

position:1853815:1
position: 1853815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1853905:1
position: 1853905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1855991-1856048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1858055-1858257:1:exon

position:1858055:1
position: 1858055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1860467-1860620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861481-1861513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863729-1863900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1867427-1867537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1871889-1871980:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1873986-1874095:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1880412-1880517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1883338-1883430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1887999-1888149:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1892590-1892731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1895684-1895861:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1897290-1897398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1898416-1898545:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1900371-1900429:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1902004-1902219:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1906515-1906768:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1908276-1908506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1909468-1909568:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1910624-1910774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1916227-1916457:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1920279-1920553:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1923054-1923259:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1925663-1926096:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1929597-1929737:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1933947-1936063:1:exon

PCNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PCNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 1 isoform X1
translation: MGSQTVQILRQGVWAALSGGWYYDPHQGTFVNALHLYLWLFLLALPFALYMALPSSMIIVAIYCPVIAAVFIILKTVNYRLHRALDEGEIVERHASQFMEQGIKTDQGNCLPRGQDSSRPSDPGGGIEMSEFIREATPPVGCSSRNSYAGLDASNQIGSGSSRLGTAATVKGDTDTAKTSDISLSLGQSSSLCKEGSEDQDLAADQKLFRRVSDDSFISIRPSLSSGGPDLPRDLSDRASHSPAHQGDGSPSGACDAEGASLVPPHSHSSRKDPRPRGVPRTSSSAVAFPEPSLNDFPLYPQRRGLDPVSELEPPKPRSGSKDPPATQAPRPGGPPRADRSADSLTSLSTQSSGSPGSYCGGTEPDTHSTVSSYKSERTSSTHVESGPSEREELPSAGLEAGASPPGERLAPGGDADGGANRNPHANERAAAPEVAPEETVGERAAPRTPRDGGRRKEGDVRPKSSSLIHRPASAHRSGRRRPGKKRASSFDASRHRDYVSFRAAKPPRTASCHDDDSSDPSDLSRTSSLQSAHRFGSDTSSGSASHSRQSLEGRFGTPKARRLGRERGADSEPRPGAPLGPEGSGRRRPSRRISGPGGPKGRARVLSLDSGTVACLNDPTRLSAPEAAKPLTTSKSDLEAKEGEVLDELSLLGRASQLESVTRSRNSLPSQATFPEREEQNAASGAVQAGEEMVRFHRERSTFRRQAVRRRHNAGSDPPPHTLLIGSPLSDTDSHISSSTSVRFYPQDLLSLPQIRLNRMLTMDTDLLEQQDIDLSPDLQDHTQPQDAAAQKIKHYYRFWILPQIWIGINFDRLTLLALFDRNREILENVLAVILAILVAFLGSILLIQGFFRDIWVFQFCLVIASCQYSLLKSVQPDSSSPRHGHNRIIAYSRPAYFCLCCGLIWLLDYGSQNLPTTKFKFYGMVFSKPLLLISARDLVIVFTLCFPIVFFIGLLPQVNTFVMYLCEQVDIHVFGGNATTSLLAALYSFICSIVAVVLLYGLCYGALRDSWDGQHIPVLFSIFCGILVAVSYHLSRQSSDPSVLFSLIQSKVFPNAEEKNPEDPLSEVKDPLPEKLRNSVSERLQSDLIVCVVIGVLYFAIHVSTVFTVLQPALKYVLYTLVGSVGFLTHYMLPQVRKQLPWNCFSHPLLKTKEYYQFEVRNAAHVMWFEKLHAWLLFLEKNIIYPLIVLNELSSSAETLASPKKLDTELGALMITIAGLKLLRSSFSRPTCQYVTVIFTVLFFKFDYEALSETMLLDLFFMSILFNKLWELLYKLRFVYTYIAPWQITWGSAFHAFAQPFAVPHSAMLFVQAIVSAFFSTPLNPFLGSAIFITSYVRPIKFWERDYNTKRVDHSNTRLASQLDRNPGSDDNNLNSIFYEHLTRSLQHSLCGDLLLGRWGNYGTGDCFILASDYLNALVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAITEGVEEDEGFCCCEPGHAPHVLSFNAAFGQRWLAWEVLVTKYVLEGYSITDNSAASMLQVFDLRKILTTYYVKGIIYYVTTSSKLEEWLSNKTMQEGLRLCSDRNYVDVDPTFNPNIDEDYDHRLAGISRESFCVIYLNWIEYCSSRRAKPLDADKDSLLVTLCYGLCVLGRRALGTASHHMSSNLESFLYGLHALFKGDFRISSIRDEWIFADMELLRKVVVPGIRMSLKLHQDHFTSPDEYEDPSVLFEAIASHEQNLVMAHEGDPAWRSAILSNSPSLLALRHVMDDGTNEYKIIMLNKGFLSFRVIKVNKECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPIGYPIYVSPLTTSYSDSHEQLKIILGGPISLGNIRKFVVSTWHRLRKGCGAGCNSGGNIEDSDGGGGTTCPPNNPLPTTEAPSRTALGSRGSSRPGPASESHLPATPHPPMLGSSQSAQSVRSSLVRPCLARGSVDSQSSYYCSGRAPWTAAPGPCRRSSTSQLSLRHLPSSLQARLPALNPLDPASG…
SIO_010081: PCNX1
subclass of: SO_0000673
so part of: PCNX1
location: join(1730424..1730576,1771378..1771586,1778567..1778672,1794443..1794488,1796569..1796655,1803997..1805454,1819348..1819480,1855991..1856048,1858040..1858257,1860467..1860620,1861481..1861513,1863729..1863900,1867427..1867537,1871889..1871980,1873986..1874095,1880412..1880517,1883338..1883430,1887999..1888149,1892590..1892731,1895684..1895861,1897290..1897398,1898416..1898545,1900371..1900429,1902004..1902219,1906515..1906768,1908276..1908506,1909468..1909568,1910624..1910774,1916227..1916457,1920279..1920553,1923054..1923259,1925663..1926096,1929597..1929737,1933947..1934087)
location: region:1730424-1934087:1
so has part: feature:1730424-1730576:1:exon
so has part: feature:1771378-1771586:1:exon
so has part: feature:1778567-1778672:1:exon
so has part: feature:1794443-1794488:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1803997-1805454:1:exon
so has part: feature:1819348-1819480:1:exon
so has part: feature:1855991-1856048:1:exon
so has part: feature:1858040-1858257:1:exon
so has part: feature:1860467-1860620:1:exon
so has part: feature:1861481-1861513:1:exon
so has part: feature:1863729-1863900:1:exon
so has part: feature:1867427-1867537:1:exon
so has part: feature:1871889-1871980:1:exon
so has part: feature:1873986-1874095:1:exon
so has part: feature:1880412-1880517:1:exon
so has part: feature:1883338-1883430:1:exon
so has part: feature:1887999-1888149:1:exon
so has part: feature:1892590-1892731:1:exon
so has part: feature:1895684-1895861:1:exon
so has part: feature:1897290-1897398:1:exon
so has part: feature:1898416-1898545:1:exon
so has part: feature:1900371-1900429:1:exon
so has part: feature:1902004-1902219:1:exon
so has part: feature:1906515-1906768:1:exon
so has part: feature:1908276-1908506:1:exon
so has part: feature:1909468-1909568:1:exon
so has part: feature:1910624-1910774:1:exon
so has part: feature:1916227-1916457:1:exon
so has part: feature:1920279-1920553:1:exon
so has part: feature:1923054-1923259:1:exon
so has part: feature:1925663-1926096:1:exon
so has part: feature:1929597-1929737:1:exon
so has part: feature:1933947-1934087:1:exon

XP_038621911.1
type: Protein
SIO_000068: ncbiprotein

position:1934087:1
position: 1934087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730424-1730576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1771378-1771586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1778567-1778672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794443-1794488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1803997-1805454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1819348-1819480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1855991-1856048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1858040-1858257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1860467-1860620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861481-1861513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863729-1863900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1867427-1867537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1871889-1871980:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1873986-1874095:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1880412-1880517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1883338-1883430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1887999-1888149:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1892590-1892731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1895684-1895861:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1897290-1897398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1898416-1898545:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1900371-1900429:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1902004-1902219:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1906515-1906768:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1908276-1908506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1909468-1909568:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1910624-1910774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1916227-1916457:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1920279-1920553:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1923054-1923259:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1925663-1926096:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1929597-1929737:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1933947-1934087:1:exon

PCNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PCNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 1 isoform X2
translation: MGSQTVQILRQGVWAALSGGWYYDPHQGTFVNALHLYLWLFLLALPFALYMALPSSMIIVAIYCPVIAAVFIILKTVNYRLHRALDEGEIVERHASQFMEQGIKTDQGNCLPRGQDSSRPSDPGGGIEMSEFIREATPPVGCSSRNSYAGLDASNQIGSGSSRLGTAATVKGDTDTAKTSDISLSLGQSSSLCKEGSEDQDLAADQKLFRRVSDDSFISIRPSLSSGGPDLPRDLSDRASHSPAHQGDGSPSGACDAEGASLVPPHSHSSRKDPRPRGVPRTSSSAVAFPEPSLNDFPLYPQRRGLDPVSELEPPKPRSGSKDPPATQAPRPGGPPRADRSADSLTSLSTQSSGSPGSYCGGTEPDTHSTVSSYKSERTSSTHVESGPSEREELPSAGLEAGASPPGERLAPGGDADGGANRNPHANERAAAPEVAPEETVGERAAPRTPRDGGRRKEGDVRPKSSSLIHRPASAHRSGRRRPGKKRASSFDASRHRDYVSFRAAKPPRTASCHDDDSSDPSDLSRTSSLQSAHRFGSDTSSGSASHSRQSLEGRFGTPKARRLGRERGADSEPRPGAPLGPEGSGRRRPSRRISGPGGPKGRARVLSLDSGTVACLNDPTRLSAPEAAKPLTTSKSDLEAKEGEVLDELSLLGRASQLESVTRSRNSLPSQATFPEREEQNAASGGKFSSTLYETGGYDMSLVNFEPAARRASNICDTDSHISSSTSVRFYPQDLIRLNRMLTMDTDLLEQQDIDLSPDLQDHTQPQDAAAQKIKHYYRFWILPQIWIGINFDRLTLLALFDRNREILENVLAVILAILVAFLGSILLIQGFFRDIWVFQFCLVIASCQYSLLKSVQPDSSSPRHGHNRIIAYSRPAYFCLCCGLIWLLDYGSQNLPTTKFKFYGMVFSKPLLLISARDLVIVFTLCFPIVFFIGLLPQVNTFVMYLCEQVDIHVFGGNATTSLLAALYSFICSIVAVVLLYGLCYGALRDSWDGQHIPVLFSIFCGILVAVSYHLSRQSSDPSVLFSLIQSKVFPNAEEKNPEDPLSEVKDPLPEKLRNSVSERLQSDLIVCVVIGVLYFAIHVSTVFTVLQPALKYVLYTLVGSVGFLTHYMLPQVRKQLPWNCFSHPLLKTKEYYQFEVRNAAHVMWFEKLHAWLLFLEKNIIYPLIVLNELSSSAETLASPKKLDTELGALMITIAGLKLLRSSFSRPTCQYVTVIFTVLFFKFDYEALSETMLLDLFFMSILFNKLWELLYKLRFVYTYIAPWQITWGSAFHAFAQPFAVPHSAMLFVQAIVSAFFSTPLNPFLGSAIFITSYVRPIKFWERDYNTKRVDHSNTRLASQLDRNPGSDDNNLNSIFYEHLTRSLQHSLCGDLLLGRWGNYGTGDCFILASDYLNALVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAITEGVEEDEGFCCCEPGHAPHVLSFNAAFGQRWLAWEVLVTKYVLEGYSITDNSAASMLQVFDLRKILTTYYVKGIIYYVTTSSKLEEWLSNKTMQEGLRLCSDRNYVDVDPTFNPNIDEDYDHRLAGISRESFCVIYLNWIEYCSSRRAKPLDADKDSLLVTLCYGLCVLGRRALGTASHHMSSNLESFLYGLHALFKGDFRISSIRDEWIFADMELLRKVVVPGIRMSLKLHQDHFTSPDEYEDPSVLFEAIASHEQNLVMAHEGDPAWRSAILSNSPSLLALRHVMDDGTNEYKIIMLNKGFLSFRVIKVNKECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPIGYPIYVSPLTTSYSDSHEQLKIILGGPISLGNIRKFVVSTWHRLRKGCGAGCNSGGNIEDSDGGGGTTCPPNNPLPTTEAPSRTALGSRGSSRPGPASESHLPATPHPPMLGSSQSAQSVRSSLVRPCLARGSVDSQSSYYCSGRAPWTAAPGPCRRSSTSQLSLRHLPSSLQARLPALNPLDPASGLGLQRTLPTASCSSHNLPA…
SIO_010081: PCNX1
subclass of: SO_0000673
so part of: PCNX1
location: join(1730424..1730576,1771378..1771586,1778567..1778672,1794443..1794488,1796569..1796655,1803997..1805454,1853815..1853905,1855991..1856048,1858055..1858257,1860467..1860620,1861481..1861513,1863729..1863900,1867427..1867537,1871889..1871980,1873986..1874095,1880412..1880517,1883338..1883430,1887999..1888149,1892590..1892731,1895684..1895861,1897290..1897398,1898416..1898545,1900371..1900429,1902004..1902219,1906515..1906768,1908276..1908506,1909468..1909568,1910624..1910774,1916227..1916457,1920279..1920553,1923054..1923259,1925663..1926096,1929597..1929737,1933947..1934087)
location: region:1730424-1934087:1
so has part: feature:1730424-1730576:1:exon
so has part: feature:1771378-1771586:1:exon
so has part: feature:1778567-1778672:1:exon
so has part: feature:1794443-1794488:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1803997-1805454:1:exon
so has part: feature:1853815-1853905:1:exon
so has part: feature:1855991-1856048:1:exon
so has part: feature:1858055-1858257:1:exon
so has part: feature:1860467-1860620:1:exon
so has part: feature:1861481-1861513:1:exon
so has part: feature:1863729-1863900:1:exon
so has part: feature:1867427-1867537:1:exon
so has part: feature:1871889-1871980:1:exon
so has part: feature:1873986-1874095:1:exon
so has part: feature:1880412-1880517:1:exon
so has part: feature:1883338-1883430:1:exon
so has part: feature:1887999-1888149:1:exon
so has part: feature:1892590-1892731:1:exon
so has part: feature:1895684-1895861:1:exon
so has part: feature:1897290-1897398:1:exon
so has part: feature:1898416-1898545:1:exon
so has part: feature:1900371-1900429:1:exon
so has part: feature:1902004-1902219:1:exon
so has part: feature:1906515-1906768:1:exon
so has part: feature:1908276-1908506:1:exon
so has part: feature:1909468-1909568:1:exon
so has part: feature:1910624-1910774:1:exon
so has part: feature:1916227-1916457:1:exon
so has part: feature:1920279-1920553:1:exon
so has part: feature:1923054-1923259:1:exon
so has part: feature:1925663-1926096:1:exon
so has part: feature:1929597-1929737:1:exon
so has part: feature:1933947-1934087:1:exon

XP_038621912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1730424-1730576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1771378-1771586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1778567-1778672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794443-1794488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1803997-1805454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853815-1853905:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1855991-1856048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1858055-1858257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1860467-1860620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861481-1861513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1863729-1863900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1867427-1867537:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1871889-1871980:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1873986-1874095:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1880412-1880517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1883338-1883430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1887999-1888149:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1892590-1892731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1895684-1895861:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1897290-1897398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1898416-1898545:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1900371-1900429:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1902004-1902219:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1906515-1906768:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1908276-1908506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1909468-1909568:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1910624-1910774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1916227-1916457:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1920279-1920553:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1923054-1923259:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1925663-1926096:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1929597-1929737:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1933947-1934087:1:exon

LOC119944903
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944903
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2009801..2009938)
location: region:2009801-2009938:-1
so has part: feature:2009801-2009938:-1:exon
subclass of: SO_0000578

119944903
type: Gene
SIO_000068: ncbigene

position:2009801:-1
position: 2009801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009938:-1
position: 2009938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009801-2009938:-1:exon

LOC119944903
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944903
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456044.1
SIO_010081: LOC119944903
subclass of: SO_0000673
so part of: LOC119944903
location: complement(2009801..2009938)
location: region:2009801-2009938:-1
so has part: feature:2009801-2009938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2009801-2009938:-1:exon

SIPA1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SIPA1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2050266..2471525
location: region:2050266-2471525:1
so has part: feature:2050266-2471525:1:exon
subclass of: SO_0000010

119944527
type: Gene
SIO_000068: ncbigene

position:2050266:1
position: 2050266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471525:1
position: 2471525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050266-2471525:1:exon

SIPA1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SIPA1L1
product: signal induced proliferation associated 1 like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765485.1
SIO_010081: SIPA1L1
subclass of: SO_0000673
so part of: SIPA1L1
location: join(2050266..2050537,2094633..2094710,2164079..2164153,2211009..2211079,2248951..2249016,2290394..2292218,2314397..2314527,2324775..2324963,2352022..2352196,2368411..2368514,2374747..2374904,2379653..2380230,2384853..2385127,2390628..2390883,2403629..2403778,2411560..2411684,2416102..2416164,2416578..2416696,2421954..2422393,2438375..2438614,2439979..2440144,2450598..2450820,2456196..2456342,2463046..2463160,2469504..2469588,2470940..2471525)
location: region:2050266-2471525:1
so has part: feature:2050266-2050537:1:exon
so has part: feature:2094633-2094710:1:exon
so has part: feature:2164079-2164153:1:exon
so has part: feature:2211009-2211079:1:exon
so has part: feature:2248951-2249016:1:exon
so has part: feature:2290394-2292218:1:exon
so has part: feature:2314397-2314527:1:exon
so has part: feature:2324775-2324963:1:exon
so has part: feature:2352022-2352196:1:exon
so has part: feature:2368411-2368514:1:exon
so has part: feature:2374747-2374904:1:exon
so has part: feature:2379653-2380230:1:exon
so has part: feature:2384853-2385127:1:exon
so has part: feature:2390628-2390883:1:exon
so has part: feature:2403629-2403778:1:exon
so has part: feature:2411560-2411684:1:exon
so has part: feature:2416102-2416164:1:exon
so has part: feature:2416578-2416696:1:exon
so has part: feature:2421954-2422393:1:exon
so has part: feature:2438375-2438614:1:exon
so has part: feature:2439979-2440144:1:exon
so has part: feature:2450598-2450820:1:exon
so has part: feature:2456196-2456342:1:exon
so has part: feature:2463046-2463160:1:exon
so has part: feature:2469504-2469588:1:exon
so has part: feature:2470940-2471525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2050266-2050537:1:exon

position:2050537:1
position: 2050537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2094633-2094710:1:exon

position:2094633:1
position: 2094633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094710:1
position: 2094710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2164079-2164153:1:exon

position:2164079:1
position: 2164079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2164153:1
position: 2164153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2211009-2211079:1:exon

position:2211009:1
position: 2211009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211079:1
position: 2211079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2248951-2249016:1:exon

position:2248951:1
position: 2248951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249016:1
position: 2249016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2290394-2292218:1:exon

position:2290394:1
position: 2290394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292218:1
position: 2292218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2314397-2314527:1:exon

position:2314397:1
position: 2314397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314527:1
position: 2314527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2324775-2324963:1:exon

position:2324775:1
position: 2324775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2324963:1
position: 2324963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2352022-2352196:1:exon

position:2352022:1
position: 2352022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2352196:1
position: 2352196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2368411-2368514:1:exon

position:2368411:1
position: 2368411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2368514:1
position: 2368514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2374747-2374904:1:exon

position:2374747:1
position: 2374747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374904:1
position: 2374904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2379653-2380230:1:exon

position:2379653:1
position: 2379653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380230:1
position: 2380230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2384853-2385127:1:exon

position:2384853:1
position: 2384853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385127:1
position: 2385127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2390628-2390883:1:exon

position:2390628:1
position: 2390628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2390883:1
position: 2390883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2403629-2403778:1:exon

position:2403629:1
position: 2403629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403778:1
position: 2403778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2411560-2411684:1:exon

position:2411560:1
position: 2411560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411684:1
position: 2411684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2416102-2416164:1:exon

position:2416102:1
position: 2416102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416164:1
position: 2416164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2416578-2416696:1:exon

position:2416578:1
position: 2416578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416696:1
position: 2416696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2421954-2422393:1:exon

position:2421954:1
position: 2421954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422393:1
position: 2422393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2438375-2438614:1:exon

position:2438375:1
position: 2438375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438614:1
position: 2438614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2439979-2440144:1:exon

position:2439979:1
position: 2439979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440144:1
position: 2440144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2450598-2450820:1:exon

position:2450598:1
position: 2450598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450820:1
position: 2450820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2456196-2456342:1:exon

position:2456196:1
position: 2456196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456342:1
position: 2456342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2463046-2463160:1:exon

position:2463046:1
position: 2463046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463160:1
position: 2463160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2469504-2469588:1:exon

position:2469504:1
position: 2469504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469588:1
position: 2469588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2470940-2471525:1:exon

position:2470940:1
position: 2470940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119944831
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944831
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2214657..2214793)
location: region:2214657-2214793:-1
so has part: feature:2214657-2214793:-1:exon
subclass of: SO_0000578

119944831
type: Gene
SIO_000068: ncbigene

position:2214657:-1
position: 2214657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214793:-1
position: 2214793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214657-2214793:-1:exon

LOC119944831
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944831
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455979.1
SIO_010081: LOC119944831
subclass of: SO_0000673
so part of: LOC119944831
location: complement(2214657..2214793)
location: region:2214657-2214793:-1
so has part: feature:2214657-2214793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214657-2214793:-1:exon

SIPA1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SIPA1L1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 1
translation: MCFPLGSNPASRLRAMTSLKRSQTERPMATERVSMVGPEGASAKVHTDDFYMRRFRSQNGSLGPPVMAPVGLPRSESTHHVTSTPGVPKMGVRARIADWPPRKDNVKEPGRPGQEGETAGCPESLSSKSSPGSQGSSVSLNSSDAAMLKSLHNTLKSKTRPVERMDSRFLMPEAYPASPRKALRRIRQRSNSDITISELDADSFDECVSPTYKSGPSLHREYGSTSSIDKQGTSGESFFDLLKGFKGDCVEPRGGTPTQLGDLLMASGSKGSSFSLDVIDGPAVPRENIRLFKEREKPPKRRCKSETGDSSIFRKLRNAKGEGEPMGKAADPDDSRSEDGVRPWTCPRCFAHYDVQSVLFDLNEAVVNRHNVIKRRNTTTGASAAAVASLVSGPPSHSASFGSPTGSTEDLNSKGSLGVDQGDDKSNELVMSCPYFRNEMGGEGERKIGLSRSNSGAFGGGESAAFESTLSSHCTNAGVAVLEVPKDNLVLHLDRVKRYIVEHVDLGAYYYRKFFYQKEHWNYFGADENLGPVAVSIRREKPEEMKENGPPHNYRIIFRTSELLTLRGAVLEDAIPSTAKHCSARGLPLKEVLEHVIPELNVQCLRLAFNTPKVTEQLMKLDEQGLSYQLKVGIMYSKAGQSTEEEMYNNESAGPGFEEFLQLLGERVRLKGFEKYRAQLDTKTDSTGTYSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGSHPFSPKNIRSHFQHVFVIVRVHNPCTENVCYSVAVTRSRDVPSFGPPIPKGVTFPKSNVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEKNVTNTPIDPSGKFPFISLASKKKEKSKPYPGAELHSAGAIVWGVHAKDYHKGMEIDCLLAISNEFLVLIEQETKSVVFNCSCRDIIGWTSTDTSLKIFYERGECVFVESFQNNLEDIREIVRRLEFVTKGCESVEMTLRRNGLGQLGFHVNYEGIVADVEPYGYAWQAGLRQGSRLVEICTVAVATLSHEQMIDLLRTSVTVKVVIVPPHEDCTPRRSCSETYRLPVMEYKMNEGVPYEFKFPFRSNNKWQRPHAPPGPAPTHSPAMARGSAGKGDGKIPPPERAANIPRSISSDGRPLERRLSPGSDHYVTVSSMALGRSPQCRNSPSSLSSSSDTGSGGGTYRQKSMPEGFGMSRRSPASIDRQSTQTDIGGSGKSTPSWQRSQDSIGDHLAYSYRGLQDYNSFVLEQREYTEPTCHIPAVSKVLPSFRESPGGRLIRQGPVVHLPASKQGHSDSHYSSHSSSNTLSSNGSSAHSDEKWYESGERGDSEPSGYTFLQGTSADSGVDTTCYGPSHGSTSSLAATSSPRTAGKEKGASLWHSSSEVISIADRTLEKESHGMERKAESSLSLDLHSKSQPGSNPLTREGSTYSINDAASHASTMTSRHSANPVVFCSARSSPKEELHIATSPQLAPSFSSSSSSSSGPRTFYPRQGATSKYLIGWKKPEGTINSVGFMDTRKRHQSDGNEIGPSRLQTSVRELRSSPKQAAKSTIEEELKRLIDLESQTLESQKNFKPPFPTTPTTRRTLHRTLSDESIYSGQREKYFNSRTSLLDQALPNDVLFSSTYPSLPKSLPLRRPSYTLGMKSLHSEFSASDSSLPDVGENRSQPMQDPGLMPLPDSASDLDWSNLVDAAKAFEVQRASFFAANEENHRPLSAASNIDQLEDQSAASLKSYAGSKDSSPTLASKVDQLEGMLKMLQEDLKKEKEDKAHLQAEVQHLREDNLRLQEESQSASDKLKKFTEWVFNTIDMS
SIO_010081: SIPA1L1
subclass of: SO_0000673
so part of: SIPA1L1
location: join(2290664..2292218,2314397..2314527,2324775..2324963,2352022..2352196,2368411..2368514,2374747..2374904,2379653..2380230,2384853..2385127,2390628..2390883,2403629..2403778,2411560..2411684,2416102..2416164,2416578..2416696,2421954..2422393,2438375..2438614,2439979..2440144,2450598..2450820,2456196..2456342,2463046..2463160,2469504..2469588,2470940..2471083)
location: region:2290664-2471083:1
so has part: feature:2290664-2292218:1:exon
so has part: feature:2314397-2314527:1:exon
so has part: feature:2324775-2324963:1:exon
so has part: feature:2352022-2352196:1:exon
so has part: feature:2368411-2368514:1:exon
so has part: feature:2374747-2374904:1:exon
so has part: feature:2379653-2380230:1:exon
so has part: feature:2384853-2385127:1:exon
so has part: feature:2390628-2390883:1:exon
so has part: feature:2403629-2403778:1:exon
so has part: feature:2411560-2411684:1:exon
so has part: feature:2416102-2416164:1:exon
so has part: feature:2416578-2416696:1:exon
so has part: feature:2421954-2422393:1:exon
so has part: feature:2438375-2438614:1:exon
so has part: feature:2439979-2440144:1:exon
so has part: feature:2450598-2450820:1:exon
so has part: feature:2456196-2456342:1:exon
so has part: feature:2463046-2463160:1:exon
so has part: feature:2469504-2469588:1:exon
so has part: feature:2470940-2471083:1:exon

XP_038621413.1
type: Protein
SIO_000068: ncbiprotein

position:2290664:1
position: 2290664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471083:1
position: 2471083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290664-2292218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2314397-2314527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2324775-2324963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2352022-2352196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2368411-2368514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2374747-2374904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2379653-2380230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2384853-2385127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2390628-2390883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2403629-2403778:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2411560-2411684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2416102-2416164:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2416578-2416696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2421954-2422393:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2438375-2438614:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2439979-2440144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2450598-2450820:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2456196-2456342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2463046-2463160:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2469504-2469588:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2470940-2471083:1:exon

LOC119944949
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944949
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2294004..2294141)
location: region:2294004-2294141:-1
so has part: feature:2294004-2294141:-1:exon
subclass of: SO_0000578

119944949
type: Gene
SIO_000068: ncbigene

position:2294004:-1
position: 2294004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2294141:-1
position: 2294141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2294004-2294141:-1:exon

LOC119944949
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944949
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456088.1
SIO_010081: LOC119944949
subclass of: SO_0000673
so part of: LOC119944949
location: complement(2294004..2294141)
location: region:2294004-2294141:-1
so has part: feature:2294004-2294141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2294004-2294141:-1:exon

LOC119944974
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944974
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2357965..2358049
location: region:2357965-2358049:1
so has part: feature:2357965-2358049:1:exon

119944974
type: Gene
SIO_000068: ncbigene

position:2357965:1
position: 2357965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358049:1
position: 2358049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357965-2358049:1:exon

LOC119944974
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119944974
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119944974
subclass of: SO_0000673
so part of: LOC119944974
location: 2357965..2358049
location: region:2357965-2358049:1
so has part: feature:2357965-2358049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2357965-2358049:1:exon

LOC119944970
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944970
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2476081..2476218
location: region:2476081-2476218:1
so has part: feature:2476081-2476218:1:exon
subclass of: SO_0000578

119944970
type: Gene
SIO_000068: ncbigene

position:2476081:1
position: 2476081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476218:1
position: 2476218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2476081-2476218:1:exon

LOC119944970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944970
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456108.1
SIO_010081: LOC119944970
subclass of: SO_0000673
so part of: LOC119944970
location: 2476081..2476218
location: region:2476081-2476218:1
so has part: feature:2476081-2476218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476081-2476218:1:exon

LOC119944945
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944945
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2486206..2486343)
location: region:2486206-2486343:-1
so has part: feature:2486206-2486343:-1:exon
subclass of: SO_0000578

119944945
type: Gene
SIO_000068: ncbigene

position:2486206:-1
position: 2486206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486343:-1
position: 2486343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2486206-2486343:-1:exon

LOC119944945
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944945
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456084.1
SIO_010081: LOC119944945
subclass of: SO_0000673
so part of: LOC119944945
location: complement(2486206..2486343)
location: region:2486206-2486343:-1
so has part: feature:2486206-2486343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2486206-2486343:-1:exon

RGS6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RGS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2543514..2962537
location: region:2543514-2962537:1
so has part: feature:2543514-2962537:1:exon
subclass of: SO_0000010

119944528
type: Gene
SIO_000068: ncbigene

position:2543514:1
position: 2543514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962537:1
position: 2962537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2543514-2962537:1:exon

RGS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RGS6
product: regulator of G protein signaling 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765488.1
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2543514..2543759,2577193..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2948442..2948495,2951252..2951312,2960911..2962537)
location: region:2543514-2962537:1
so has part: feature:2543514-2543759:1:exon
so has part: feature:2577193-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2948442-2948495:1:exon
so has part: feature:2951252-2951312:1:exon
so has part: feature:2960911-2962537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2543514-2543759:1:exon

position:2543759:1
position: 2543759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2577193-2577298:1:exon

position:2577193:1
position: 2577193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2577298:1
position: 2577298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2854653-2854752:1:exon

position:2854653:1
position: 2854653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854752:1
position: 2854752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2881336-2881386:1:exon

position:2881336:1
position: 2881336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881386:1
position: 2881386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2884412-2884518:1:exon

position:2884412:1
position: 2884412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884518:1
position: 2884518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2885727-2885778:1:exon

position:2885727:1
position: 2885727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885778:1
position: 2885778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2888040-2888104:1:exon

position:2888040:1
position: 2888040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888104:1
position: 2888104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2894350-2894426:1:exon

position:2894350:1
position: 2894350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2894426:1
position: 2894426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2898425-2898506:1:exon

position:2898425:1
position: 2898425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898506:1
position: 2898506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2900043-2900117:1:exon

position:2900043:1
position: 2900043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900117:1
position: 2900117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2903982-2904080:1:exon

position:2903982:1
position: 2903982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904080:1
position: 2904080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2911865-2911926:1:exon

position:2911865:1
position: 2911865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911926:1
position: 2911926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2924835-2924945:1:exon

position:2924835:1
position: 2924835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924945:1
position: 2924945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2927899-2928024:1:exon

position:2927899:1
position: 2927899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2928024:1
position: 2928024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2934255-2934441:1:exon

position:2934255:1
position: 2934255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2934441:1
position: 2934441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2937828-2937917:1:exon

position:2937828:1
position: 2937828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937917:1
position: 2937917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2948442-2948495:1:exon

position:2948442:1
position: 2948442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948495:1
position: 2948495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2951252-2951312:1:exon

position:2951252:1
position: 2951252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951312:1
position: 2951312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2960911-2962537:1:exon

position:2960911:1
position: 2960911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RGS6
product: regulator of G protein signaling 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765486.1
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2543514..2543759,2577193..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2948442..2948495,2960911..2961039)
location: region:2543514-2961039:1
so has part: feature:2543514-2543759:1:exon
so has part: feature:2577193-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2948442-2948495:1:exon
so has part: feature:2960911-2961039:1:exon

position:2961039:1
position: 2961039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2543514-2543759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2577193-2577298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2854653-2854752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2881336-2881386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2884412-2884518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2885727-2885778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2888040-2888104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2894350-2894426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2898425-2898506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2900043-2900117:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2903982-2904080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2911865-2911926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924835-2924945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2927899-2928024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2934255-2934441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2937828-2937917:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948442-2948495:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2960911-2961039:1:exon

RGS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RGS6
product: regulator of G protein signaling 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765487.1
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2543514..2543759,2577193..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2960911..2961039)
location: region:2543514-2961039:1
so has part: feature:2543514-2543759:1:exon
so has part: feature:2577193-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2960911-2961039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2543514-2543759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2577193-2577298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2854653-2854752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2881336-2881386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2884412-2884518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2885727-2885778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2888040-2888104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2894350-2894426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2898425-2898506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2900043-2900117:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2903982-2904080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2911865-2911926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924835-2924945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2927899-2928024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2934255-2934441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2937828-2937917:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2960911-2961039:1:exon

RGS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RGS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 6 isoform X3
translation: MAQASTGQSTVGIADPEENSPNMIVYRKIEDIITKMQDDKIGGVPIRTVKSFLSKIPSVVTGTDVVQWLMKNLSIEDPAEAIHLGSLVAAQGYVFPISDHVLTLKDDSTFYRFQAPYFWPSNCWGPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQKVKKSLYGITEDSQSQSPIHTPAQPVRKTTKEDIRKQITFLNVQMDRHRLKMSKVAESLMAYTEQYVEYDPIITPADPSNPWISDDTTLWDIEMSKEPSQQRVKRWGFSMDEVLKDPVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVPTRVEEIWQEFLAPGAQSAINLDSHSYEKTSQNVKDPGRYTYEDAQEHIYKLMKSDSYARFLRSSAYQDLLQAKKKPENDQGRRTSLEKFTRSVCCWRRVRMTFHPRGGYLPGAGKVPGGQAPHRSDAVLMIPSPGPGAAYPAGNRSRPASSESMSFRGELVTVKEKE
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2577215..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2948442..2948495,2951252..2951312,2960911..2961074)
location: region:2577215-2961074:1
so has part: feature:2577215-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2948442-2948495:1:exon
so has part: feature:2951252-2951312:1:exon
so has part: feature:2960911-2961074:1:exon

XP_038621416.1
type: Protein
SIO_000068: ncbiprotein

position:2577215:1
position: 2577215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961074:1
position: 2961074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2577215-2577298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2854653-2854752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2881336-2881386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2884412-2884518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2885727-2885778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2888040-2888104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2894350-2894426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2898425-2898506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900043-2900117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2903982-2904080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2911865-2911926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924835-2924945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2927899-2928024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2934255-2934441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2937828-2937917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2948442-2948495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2951252-2951312:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2960911-2961074:1:exon

RGS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RGS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 6 isoform X1
translation: MAQASTGQSTVGIADPEENSPNMIVYRKIEDIITKMQDDKIGGVPIRTVKSFLSKIPSVVTGTDVVQWLMKNLSIEDPAEAIHLGSLVAAQGYVFPISDHVLTLKDDSTFYRFQAPYFWPSNCWGPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQKVKKSLYGITEDSQSQSPIHTPAQPVRKTTKEDIRKQITFLNVQMDRHRLKMSKVAESLMAYTEQYVEYDPIITPADPSNPWISDDTTLWDIEMSKEPSQQRVKRWGFSMDEVLKDPVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVPTRVEEIWQEFLAPGAQSAINLDSHSYEKTSQNVKDPGRYTYEDAQEHIYKLMKSDSYARFLRSSAYQDLLQAKKKPENDQGRRTSLEKFTRSVGKSLAGKRLTGLMQS
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2577215..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2948442..2948495,2960911..2960958)
location: region:2577215-2960958:1
so has part: feature:2577215-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2948442-2948495:1:exon
so has part: feature:2960911-2960958:1:exon

XP_038621414.1
type: Protein
SIO_000068: ncbiprotein

position:2960958:1
position: 2960958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2577215-2577298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2854653-2854752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2881336-2881386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2884412-2884518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2885727-2885778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2888040-2888104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2894350-2894426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2898425-2898506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900043-2900117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2903982-2904080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2911865-2911926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924835-2924945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2927899-2928024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2934255-2934441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2937828-2937917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2948442-2948495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2960911-2960958:1:exon

RGS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RGS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 6 isoform X2
translation: MAQASTGQSTVGIADPEENSPNMIVYRKIEDIITKMQDDKIGGVPIRTVKSFLSKIPSVVTGTDVVQWLMKNLSIEDPAEAIHLGSLVAAQGYVFPISDHVLTLKDDSTFYRFQAPYFWPSNCWGPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQKVKKSLYGITEDSQSQSPIHTPAQPVRKTTKEDIRKQITFLNVQMDRHRLKMSKVAESLMAYTEQYVEYDPIITPADPSNPWISDDTTLWDIEMSKEPSQQRVKRWGFSMDEVLKDPVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVPTRVEEIWQEFLAPGAQSAINLDSHSYEKTSQNVKDPGRYTYEDAQEHIYKLMKSDSYARFLRSSAYQDLLQAKKKGKSLAGKRLTGLMQS
SIO_010081: RGS6
subclass of: SO_0000673
so part of: RGS6
location: join(2577215..2577298,2854653..2854752,2881336..2881386,2884412..2884518,2885727..2885778,2888040..2888104,2894350..2894426,2898425..2898506,2900043..2900117,2903982..2904080,2911865..2911926,2924835..2924945,2927899..2928024,2934255..2934441,2937828..2937917,2960911..2960958)
location: region:2577215-2960958:1
so has part: feature:2577215-2577298:1:exon
so has part: feature:2854653-2854752:1:exon
so has part: feature:2881336-2881386:1:exon
so has part: feature:2884412-2884518:1:exon
so has part: feature:2885727-2885778:1:exon
so has part: feature:2888040-2888104:1:exon
so has part: feature:2894350-2894426:1:exon
so has part: feature:2898425-2898506:1:exon
so has part: feature:2900043-2900117:1:exon
so has part: feature:2903982-2904080:1:exon
so has part: feature:2911865-2911926:1:exon
so has part: feature:2924835-2924945:1:exon
so has part: feature:2927899-2928024:1:exon
so has part: feature:2934255-2934441:1:exon
so has part: feature:2937828-2937917:1:exon
so has part: feature:2960911-2960958:1:exon

XP_038621415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2577215-2577298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2854653-2854752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2881336-2881386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2884412-2884518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2885727-2885778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2888040-2888104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2894350-2894426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2898425-2898506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900043-2900117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2903982-2904080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2911865-2911926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924835-2924945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2927899-2928024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2934255-2934441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2937828-2937917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2960911-2960958:1:exon

LOC119944978
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944978
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2893805..2893942)
location: region:2893805-2893942:-1
so has part: feature:2893805-2893942:-1:exon
subclass of: SO_0000578

119944978
type: Gene
SIO_000068: ncbigene

position:2893805:-1
position: 2893805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893942:-1
position: 2893942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893805-2893942:-1:exon

LOC119944978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944978
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456115.1
SIO_010081: LOC119944978
subclass of: SO_0000673
so part of: LOC119944978
location: complement(2893805..2893942)
location: region:2893805-2893942:-1
so has part: feature:2893805-2893942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893805-2893942:-1:exon

LOC119944999
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944999
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2978775..2978911
location: region:2978775-2978911:1
so has part: feature:2978775-2978911:1:exon
subclass of: SO_0000578

119944999
type: Gene
SIO_000068: ncbigene

position:2978775:1
position: 2978775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2978911:1
position: 2978911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2978775-2978911:1:exon

LOC119944999
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944999
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456135.1
SIO_010081: LOC119944999
subclass of: SO_0000673
so part of: LOC119944999
location: 2978775..2978911
location: region:2978775-2978911:1
so has part: feature:2978775-2978911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2978775-2978911:1:exon

FUT8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3329245..3721995)
location: region:3329245-3721995:-1
so has part: feature:3329245-3721995:-1:exon
subclass of: SO_0000010

119944640
type: Gene
SIO_000068: ncbigene

position:3329245:-1
position: 3329245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721995:-1
position: 3721995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3329245-3721995:-1:exon

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765688.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509981,3521091..3521154,3721894..3721995))
location: region:3329245-3721995:-1
so has part: feature:3721894-3721995:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3721894-3721995:-1:exon

position:3721894:-1
position: 3721894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3521091-3521154:-1:exon

position:3521091:-1
position: 3521091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521154:-1
position: 3521154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3509569-3509981:-1:exon

position:3509569:-1
position: 3509569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509981:-1
position: 3509981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3442630-3442745:-1:exon

position:3442630:-1
position: 3442630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442745:-1
position: 3442745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3442364-3442529:-1:exon

position:3442364:-1
position: 3442364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442529:-1
position: 3442529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3406335-3406449:-1:exon

position:3406335:-1
position: 3406335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3406449:-1
position: 3406449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3390018-3390255:-1:exon

position:3390018:-1
position: 3390018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3390255:-1
position: 3390255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3359953-3360199:-1:exon

position:3359953:-1
position: 3359953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360199:-1
position: 3360199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3355324-3355500:-1:exon

position:3355324:-1
position: 3355324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3355500:-1
position: 3355500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3338289-3338439:-1:exon

position:3338289:-1
position: 3338289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338439:-1
position: 3338439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3329245-3330349:-1:exon

position:3330349:-1
position: 3330349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765691.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442526,3442630..3442745,3509569..3509981,3521091..3521154,3606201..3606292,3721894..3721995))
location: region:3329245-3721995:-1
so has part: feature:3721894-3721995:-1:exon
so has part: feature:3606201-3606292:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442526:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3721894-3721995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3606201-3606292:-1:exon

position:3606201:-1
position: 3606201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3606292:-1
position: 3606292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3521091-3521154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3509569-3509981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3442364-3442526:-1:exon

position:3442526:-1
position: 3442526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3329245-3330349:-1:exon

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765685.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509981,3521091..3521154,3606201..3606292,3721894..3721995))
location: region:3329245-3721995:-1
so has part: feature:3721894-3721995:-1:exon
so has part: feature:3606201-3606292:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3721894-3721995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3606201-3606292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3521091-3521154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3509569-3509981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3329245-3330349:-1:exon

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765686.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509981,3521091..3521154,3606201..3606292,3695148..3695191))
location: region:3329245-3695191:-1
so has part: feature:3695148-3695191:-1:exon
so has part: feature:3606201-3606292:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

position:3695191:-1
position: 3695191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3695148-3695191:-1:exon

position:3695148:-1
position: 3695148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3606201-3606292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3521091-3521154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3509569-3509981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3329245-3330349:-1:exon

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038765687.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509981,3521091..3521154,3572656..3572681))
location: region:3329245-3572681:-1
so has part: feature:3572656-3572681:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

position:3572681:-1
position: 3572681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3572656-3572681:-1:exon

position:3572656:-1
position: 3572656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3521091-3521154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3509569-3509981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329245-3330349:-1:exon

FUT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FUT8
product: fucosyltransferase 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765690.1
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3329245..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509981,3521091..3521154,3553462..3553478))
location: region:3329245-3553478:-1
so has part: feature:3553462-3553478:-1:exon
so has part: feature:3521091-3521154:-1:exon
so has part: feature:3509569-3509981:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3329245-3330349:-1:exon

position:3553478:-1
position: 3553478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3553462-3553478:-1:exon

position:3553462:-1
position: 3553462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3521091-3521154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3509569-3509981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329245-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X2
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442526,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442526:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621619.1
type: Protein
SIO_000068: ncbiprotein

position:3330032:-1
position: 3330032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509771:-1
position: 3509771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X1
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDAGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X1
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDAGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X1
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDAGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X1
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDAGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

FUT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FUT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-(1,6)-fucosyltransferase isoform X1
translation: MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIDQIPAAGRIRVLEEQLIKAKEQIENYKKPTGDAGLGKDHEVLRRKIENGAKELWFFLQSELKKIKNLEGSELQRHADEFLSDLGHQERSIMTDLYYLSQTDGAGDWREKESRDLTELVQRRILYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFKPVSDTCTDRTGTSTGHWSGETNDKDVQVVELPIVDSLHPRPPYLPLAVPEDLADRLIRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATRKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMPVDKKRVYLATDDPSLLQEAKVKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASASFHSLDDIYYFGGQNAHNQVAIYPHHPQTADEIPMEPGDVIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYPEAEK
SIO_010081: FUT8
subclass of: SO_0000673
so part of: FUT8
location: complement(join(3330032..3330349,3338289..3338439,3355324..3355500,3359953..3360199,3390018..3390255,3406335..3406449,3442364..3442529,3442630..3442745,3509569..3509771))
location: region:3330032-3509771:-1
so has part: feature:3509569-3509771:-1:exon
so has part: feature:3442630-3442745:-1:exon
so has part: feature:3442364-3442529:-1:exon
so has part: feature:3406335-3406449:-1:exon
so has part: feature:3390018-3390255:-1:exon
so has part: feature:3359953-3360199:-1:exon
so has part: feature:3355324-3355500:-1:exon
so has part: feature:3338289-3338439:-1:exon
so has part: feature:3330032-3330349:-1:exon

XP_038621618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3509569-3509771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442630-3442745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442364-3442529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3406335-3406449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3390018-3390255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359953-3360199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355324-3355500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338289-3338439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330032-3330349:-1:exon

LOC119944864
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944864
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3545714..3545851)
location: region:3545714-3545851:-1
so has part: feature:3545714-3545851:-1:exon
subclass of: SO_0000578

119944864
type: Gene
SIO_000068: ncbigene

position:3545714:-1
position: 3545714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545851:-1
position: 3545851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3545714-3545851:-1:exon

LOC119944864
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944864
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456009.1
SIO_010081: LOC119944864
subclass of: SO_0000673
so part of: LOC119944864
location: complement(3545714..3545851)
location: region:3545714-3545851:-1
so has part: feature:3545714-3545851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3545714-3545851:-1:exon

LOC119944919
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944919
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3624022..3624158
location: region:3624022-3624158:1
so has part: feature:3624022-3624158:1:exon
subclass of: SO_0000578

119944919
type: Gene
SIO_000068: ncbigene

position:3624022:1
position: 3624022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3624158:1
position: 3624158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624022-3624158:1:exon

LOC119944919
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944919
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456060.1
SIO_010081: LOC119944919
subclass of: SO_0000673
so part of: LOC119944919
location: 3624022..3624158
location: region:3624022-3624158:1
so has part: feature:3624022-3624158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3624022-3624158:1:exon

MAX
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3834123..3861263
location: region:3834123-3861263:1
so has part: feature:3834123-3861263:1:exon
subclass of: SO_0000010

119944682
type: Gene
SIO_000068: ncbigene

position:3834123:1
position: 3834123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3861263:1
position: 3861263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834123-3861263:1:exon

MAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAX
product: MYC associated factor X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765751.1
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834123..3834321,3834561..3834587,3847066..3847173,3858270..3858399,3858912..3858995,3859652..3861263)
location: region:3834123-3861263:1
so has part: feature:3834123-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3861263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3834123-3834321:1:exon

position:3834321:1
position: 3834321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

position:3834561:1
position: 3834561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3834587:1
position: 3834587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

position:3847066:1
position: 3847066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3847173:1
position: 3847173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3858270-3858399:1:exon

position:3858270:1
position: 3858270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858399:1
position: 3858399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3858912-3858995:1:exon

position:3858912:1
position: 3858912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858995:1
position: 3858995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3859652-3861263:1:exon

position:3859652:1
position: 3859652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAX
product: MYC associated factor X, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765753.1
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834123..3834321,3847066..3847173,3858270..3858399,3858912..3858995,3859652..3861263)
location: region:3834123-3861263:1
so has part: feature:3834123-3834321:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3861263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3834123-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3858270-3858399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858912-3858995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3861263:1:exon

MAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAX
product: MYC associated factor X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765752.1
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834139..3834321,3834561..3834587,3847066..3847173,3858276..3858399,3858912..3858995,3859652..3861263)
location: region:3834139-3861263:1
so has part: feature:3834139-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858276-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3861263:1:exon

position:3834139:1
position: 3834139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834139-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858276-3858399:1:exon

position:3858276:1
position: 3858276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3858912-3858995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859652-3861263:1:exon

MAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAX
product: MYC associated factor X, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765755.1
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834147..3834321,3834561..3834587,3847066..3847173,3858270..3858399,3859652..3861263)
location: region:3834147-3861263:1
so has part: feature:3834147-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3859652-3861263:1:exon

position:3834147:1
position: 3834147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834147-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858270-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3861263:1:exon

MAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAX
product: MYC associated factor X, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765756.1
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834158..3834321,3834561..3834587,3847066..3847173,3858276..3858399,3859652..3861263)
location: region:3834158-3861263:1
so has part: feature:3834158-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858276-3858399:1:exon
so has part: feature:3859652-3861263:1:exon

position:3834158:1
position: 3834158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834158-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858276-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3861263:1:exon

MAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein max isoform X1
translation: MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKQQASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQGQSESRSRSLFRGVHFSSSLMEDASRRKFRALEKARSSAQLQANYSSSDSSLYTNPKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834286..3834321,3834561..3834587,3847066..3847173,3858270..3858399,3858912..3858995,3859652..3859839)
location: region:3834286-3859839:1
so has part: feature:3834286-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3859839:1:exon

XP_038621679.1
type: Protein
SIO_000068: ncbiprotein

position:3834286:1
position: 3834286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859839:1
position: 3859839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834286-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858270-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3858912-3858995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859652-3859839:1:exon

MAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein max isoform X4
translation: MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKQQASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALEKARSSAQLQANYSSSDSSLYTNPKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834286..3834321,3834561..3834587,3847066..3847173,3858270..3858399,3859652..3859839)
location: region:3834286-3859839:1
so has part: feature:3834286-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3859652-3859839:1:exon

XP_038621683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3834286-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858270-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3859839:1:exon

MAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein max isoform X2
translation: MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQGQSESRSRSLFRGVHFSSSLMEDASRRKFRALEKARSSAQLQANYSSSDSSLYTNPKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834286..3834321,3834561..3834587,3847066..3847173,3858276..3858399,3858912..3858995,3859652..3859839)
location: region:3834286-3859839:1
so has part: feature:3834286-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858276-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3859839:1:exon

XP_038621680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3834286-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858276-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3858912-3858995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859652-3859839:1:exon

MAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein max isoform X5
translation: MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALEKARSSAQLQANYSSSDSSLYTNPKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834286..3834321,3834561..3834587,3847066..3847173,3858276..3858399,3859652..3859839)
location: region:3834286-3859839:1
so has part: feature:3834286-3834321:1:exon
so has part: feature:3834561-3834587:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858276-3858399:1:exon
so has part: feature:3859652-3859839:1:exon

XP_038621684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3834286-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3834561-3834587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858276-3858399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3859839:1:exon

MAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein max isoform X3
translation: MSDNDDIEVESDADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKQQASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQGQSESRSRSLFRGVHFSSSLMEDASRRKFRALEKARSSAQLQANYSSSDSSLYTNPKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS
SIO_010081: MAX
subclass of: SO_0000673
so part of: MAX
location: join(3834286..3834321,3847066..3847173,3858270..3858399,3858912..3858995,3859652..3859839)
location: region:3834286-3859839:1
so has part: feature:3834286-3834321:1:exon
so has part: feature:3847066-3847173:1:exon
so has part: feature:3858270-3858399:1:exon
so has part: feature:3858912-3858995:1:exon
so has part: feature:3859652-3859839:1:exon

XP_038621681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3834286-3834321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847066-3847173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3858270-3858399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3858912-3858995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3859652-3859839:1:exon

FNTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FNTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3884105..4001795)
location: region:3884105-4001795:-1
so has part: feature:3884105-4001795:-1:exon
subclass of: SO_0000010

119944488
type: Gene
SIO_000068: ncbigene

position:3884105:-1
position: 3884105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001795:-1
position: 4001795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3884105-4001795:-1:exon

FNTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FNTB
product: farnesyltransferase, CAAX box, beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765432.1
SIO_010081: FNTB
subclass of: SO_0000673
so part of: FNTB
location: complement(join(3884105..3885528,3888527..3888641,3891556..3891667,3899550..3899682,3906214..3906343,3906860..3906946,3923897..3923980,3924146..3924292,3942305..3942396,3943618..3943690,3956568..3956632,3970189..3970417,3984911..3984993,3994652..3994731,4001477..4001795))
location: region:3884105-4001795:-1
so has part: feature:4001477-4001795:-1:exon
so has part: feature:3994652-3994731:-1:exon
so has part: feature:3984911-3984993:-1:exon
so has part: feature:3970189-3970417:-1:exon
so has part: feature:3956568-3956632:-1:exon
so has part: feature:3943618-3943690:-1:exon
so has part: feature:3942305-3942396:-1:exon
so has part: feature:3924146-3924292:-1:exon
so has part: feature:3923897-3923980:-1:exon
so has part: feature:3906860-3906946:-1:exon
so has part: feature:3906214-3906343:-1:exon
so has part: feature:3899550-3899682:-1:exon
so has part: feature:3891556-3891667:-1:exon
so has part: feature:3888527-3888641:-1:exon
so has part: feature:3884105-3885528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4001477-4001795:-1:exon

position:4001477:-1
position: 4001477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3994652-3994731:-1:exon

position:3994652:-1
position: 3994652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3994731:-1
position: 3994731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3984911-3984993:-1:exon

position:3984911:-1
position: 3984911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3984993:-1
position: 3984993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3970189-3970417:-1:exon

position:3970189:-1
position: 3970189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3970417:-1
position: 3970417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3956568-3956632:-1:exon

position:3956568:-1
position: 3956568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3956632:-1
position: 3956632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3943618-3943690:-1:exon

position:3943618:-1
position: 3943618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3943690:-1
position: 3943690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3942305-3942396:-1:exon

position:3942305:-1
position: 3942305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3942396:-1
position: 3942396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3924146-3924292:-1:exon

position:3924146:-1
position: 3924146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3924292:-1
position: 3924292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3923897-3923980:-1:exon

position:3923897:-1
position: 3923897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923980:-1
position: 3923980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3906860-3906946:-1:exon

position:3906860:-1
position: 3906860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3906946:-1
position: 3906946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3906214-3906343:-1:exon

position:3906214:-1
position: 3906214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3906343:-1
position: 3906343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3899550-3899682:-1:exon

position:3899550:-1
position: 3899550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899682:-1
position: 3899682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3891556-3891667:-1:exon

position:3891556:-1
position: 3891556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3891667:-1
position: 3891667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3888527-3888641:-1:exon

position:3888527:-1
position: 3888527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3888641:-1
position: 3888641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3884105-3885528:-1:exon

position:3885528:-1
position: 3885528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FNTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FNTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein farnesyltransferase subunit beta
translation: MAGRPGPVLPPARPGPALPLSAPALSGLSPAPLPPQPSRPRALPSGWPRLAPAGPGPCPAAGPAPYPVPVLRPPSRLDPPAGRGAAGQGPGPKDGGRASEGRGRAAGADIETGETYGQEEEGRVSMSYCLIAHIICRDRKTRSQSENSTKSWKRQHDGTASAPSARPFPQAGAGAVRPPVPPPVMAAAAAAAAASSSSASPFPSSFPPPEPPYCLGPDHARERLRDDAVETVTSAEQTRVEDKIQEVFSAYGINHHVPRLILQREKHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPLPESVASDVCQFLDRCQSPSGGFGGGPGQQPHLAPTYAAVSALCIIGTEEAFNIINREKLLRYLYSLKQQDGSFIMHIGGEVDVRSAYCAASVASLTNIITPTLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKECSLNLKCLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMNRWMFHQQALQEYILLCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGDILRDVVLGVPENRLHPTHPVYNISPDKVVHAVMHFLKKPVPHLEEEEATAAAKGVTATN
SIO_010081: FNTB
subclass of: SO_0000673
so part of: FNTB
location: complement(join(3885391..3885528,3888527..3888641,3891556..3891667,3899550..3899682,3906214..3906343,3906860..3906946,3923897..3923980,3924146..3924292,3942305..3942396,3943618..3943690,3956568..3956632,3970189..3970417,3984911..3984993,3994652..3994731,4001477..4001795))
location: region:3885391-4001795:-1
so has part: feature:4001477-4001795:-1:exon
so has part: feature:3994652-3994731:-1:exon
so has part: feature:3984911-3984993:-1:exon
so has part: feature:3970189-3970417:-1:exon
so has part: feature:3956568-3956632:-1:exon
so has part: feature:3943618-3943690:-1:exon
so has part: feature:3942305-3942396:-1:exon
so has part: feature:3924146-3924292:-1:exon
so has part: feature:3923897-3923980:-1:exon
so has part: feature:3906860-3906946:-1:exon
so has part: feature:3906214-3906343:-1:exon
so has part: feature:3899550-3899682:-1:exon
so has part: feature:3891556-3891667:-1:exon
so has part: feature:3888527-3888641:-1:exon
so has part: feature:3885391-3885528:-1:exon

XP_038621360.1
type: Protein
SIO_000068: ncbiprotein

position:3885391:-1
position: 3885391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001477-4001795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3994652-3994731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3984911-3984993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3970189-3970417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3956568-3956632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3943618-3943690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3942305-3942396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3924146-3924292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3923897-3923980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3906860-3906946:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3906214-3906343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3899550-3899682:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3891556-3891667:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3888527-3888641:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3885391-3885528:-1:exon

RAB15
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RAB15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4001615..4028511
location: region:4001615-4028511:1
so has part: feature:4001615-4028511:1:exon
subclass of: SO_0000010

119944502
type: Gene
SIO_000068: ncbigene

position:4001615:1
position: 4001615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028511:1
position: 4028511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001615-4028511:1:exon

RAB15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RAB15
product: RAB15, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765449.1
SIO_010081: RAB15
subclass of: SO_0000673
so part of: RAB15
location: join(4001615..4001917,4024348..4024408,4025562..4025622,4026344..4026421,4026951..4027040,4028039..4028104,4028294..4028511)
location: region:4001615-4028511:1
so has part: feature:4001615-4001917:1:exon
so has part: feature:4024348-4024408:1:exon
so has part: feature:4025562-4025622:1:exon
so has part: feature:4026344-4026421:1:exon
so has part: feature:4026951-4027040:1:exon
so has part: feature:4028039-4028104:1:exon
so has part: feature:4028294-4028511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4001615-4001917:1:exon

position:4001917:1
position: 4001917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4024348-4024408:1:exon

position:4024348:1
position: 4024348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4024408:1
position: 4024408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4025562-4025622:1:exon

position:4025562:1
position: 4025562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4025622:1
position: 4025622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4026344-4026421:1:exon

position:4026344:1
position: 4026344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4026421:1
position: 4026421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4026951-4027040:1:exon

position:4026951:1
position: 4026951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027040:1
position: 4027040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4028039-4028104:1:exon

position:4028039:1
position: 4028039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028104:1
position: 4028104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4028294-4028511:1:exon

position:4028294:1
position: 4028294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RAB15
product: RAB15, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038765448.1
SIO_010081: RAB15
subclass of: SO_0000673
so part of: RAB15
location: join(4001621..4001917,4024348..4024408,4025562..4025622,4026344..4026421,4026951..4027040,4028039..4028104,4028261..4028511)
location: region:4001621-4028511:1
so has part: feature:4001621-4001917:1:exon
so has part: feature:4024348-4024408:1:exon
so has part: feature:4025562-4025622:1:exon
so has part: feature:4026344-4026421:1:exon
so has part: feature:4026951-4027040:1:exon
so has part: feature:4028039-4028104:1:exon
so has part: feature:4028261-4028511:1:exon

position:4001621:1
position: 4001621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001621-4001917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4024348-4024408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4025562-4025622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026344-4026421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4026951-4027040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028039-4028104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028261-4028511:1:exon

position:4028261:1
position: 4028261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RAB15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-15 isoform X1
translation: MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPDGVQKILIGNKADEEQKRQVGRDQGQQLAKEYGMDFYETSACTNFNIKESFTRLTELVLQAHKKELDSLRTFASEELPLAELEEDEGRPEGTGHSPKTCWC
SIO_010081: RAB15
subclass of: SO_0000673
so part of: RAB15
location: join(4001794..4001917,4024348..4024408,4025562..4025622,4026344..4026421,4026951..4027040,4028039..4028104,4028261..4028419)
location: region:4001794-4028419:1
so has part: feature:4001794-4001917:1:exon
so has part: feature:4024348-4024408:1:exon
so has part: feature:4025562-4025622:1:exon
so has part: feature:4026344-4026421:1:exon
so has part: feature:4026951-4027040:1:exon
so has part: feature:4028039-4028104:1:exon
so has part: feature:4028261-4028419:1:exon

XP_038621376.1
type: Protein
SIO_000068: ncbiprotein

position:4001794:1
position: 4001794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028419:1
position: 4028419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001794-4001917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4024348-4024408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4025562-4025622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026344-4026421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4026951-4027040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028039-4028104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028261-4028419:1:exon

RAB15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RAB15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-15 isoform X2
translation: MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPDGVQKILIGNKADEEQKRQVGRDQGQQLAKEYGMDFYETSACTNFNIKEAHKKELDSLRTFASEELPLAELEEDEGRPEGTGHSPKTCWC
SIO_010081: RAB15
subclass of: SO_0000673
so part of: RAB15
location: join(4001794..4001917,4024348..4024408,4025562..4025622,4026344..4026421,4026951..4027040,4028039..4028104,4028294..4028419)
location: region:4001794-4028419:1
so has part: feature:4001794-4001917:1:exon
so has part: feature:4024348-4024408:1:exon
so has part: feature:4025562-4025622:1:exon
so has part: feature:4026344-4026421:1:exon
so has part: feature:4026951-4027040:1:exon
so has part: feature:4028039-4028104:1:exon
so has part: feature:4028294-4028419:1:exon

XP_038621377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4001794-4001917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4024348-4024408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4025562-4025622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026344-4026421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4026951-4027040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4028039-4028104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4028294-4028419:1:exon

GPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4038105..4043933
location: region:4038105-4043933:1
so has part: feature:4038105-4043933:1:exon
subclass of: SO_0000010

119944504
type: Gene
SIO_000068: ncbigene

position:4038105:1
position: 4038105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043933:1
position: 4043933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038105-4043933:1:exon

GPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPX2
product: glutathione peroxidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765450.1
SIO_010081: GPX2
subclass of: SO_0000673
so part of: GPX2
location: join(4038105..4038341,4043346..4043933)
location: region:4038105-4043933:1
so has part: feature:4038105-4038341:1:exon
so has part: feature:4043346-4043933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4038105-4038341:1:exon

position:4038341:1
position: 4038341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4043346-4043933:1:exon

position:4043346:1
position: 4043346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:4038237..4038239,aa:Sec)
product: glutathione peroxidase 2
translation: MAHIAKSFYDLSATSLSGEKVDFNTFRGRAVLIENVASLUGTTTRDYTQLNELQRLFPRRLVILGFPCNQFGHQENCQNDEILNSLKYVRPGNGFEPHFVLTQKCEVNGQNEHPVFSYLKAKLPYPEDDPSALMTDPKLIIWSPVRRSDVAWNFEKFLVGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI
SIO_010081: GPX2
subclass of: SO_0000673
so part of: GPX2
location: join(4038120..4038341,4043346..4043696)
location: region:4038120-4043696:1
so has part: feature:4038120-4038341:1:exon
so has part: feature:4043346-4043696:1:exon

XP_038621378.1
type: Protein
SIO_000068: ncbiprotein

position:4038120:1
position: 4038120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043696:1
position: 4043696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4038120-4038341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4043346-4043696:1:exon

CHURC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CHURC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4049804..4060711)
location: region:4049804-4060711:-1
so has part: feature:4049804-4060711:-1:exon
subclass of: SO_0000010

119944505
type: Gene
SIO_000068: ncbigene

position:4049804:-1
position: 4049804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4060711:-1
position: 4060711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049804-4060711:-1:exon

CHURC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHURC1
product: churchill domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765452.1
SIO_010081: CHURC1
subclass of: SO_0000673
so part of: CHURC1
location: complement(join(4049804..4050041,4052652..4052787,4060647..4060711))
location: region:4049804-4060711:-1
so has part: feature:4060647-4060711:-1:exon
so has part: feature:4052652-4052787:-1:exon
so has part: feature:4049804-4050041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4060647-4060711:-1:exon

position:4060647:-1
position: 4060647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4052652-4052787:-1:exon

position:4052652:-1
position: 4052652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052787:-1
position: 4052787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4049804-4050041:-1:exon

position:4050041:-1
position: 4050041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHURC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHURC1
product: churchill domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038765451.1
SIO_010081: CHURC1
subclass of: SO_0000673
so part of: CHURC1
location: complement(join(4049804..4050041,4051853..4051923,4052652..4052787,4060647..4060711))
location: region:4049804-4060711:-1
so has part: feature:4060647-4060711:-1:exon
so has part: feature:4052652-4052787:-1:exon
so has part: feature:4051853-4051923:-1:exon
so has part: feature:4049804-4050041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4060647-4060711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4052652-4052787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4051853-4051923:-1:exon

position:4051853:-1
position: 4051853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4051923:-1
position: 4051923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4049804-4050041:-1:exon

CHURC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHURC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Churchill isoform X1
translation: MCGACVEKEYPDRGNTCLENGSFLLNYIGCAMCSKRDFVLVTNKATKEEDGEEIVTYDHVCKNCHHMVARHEYTFSVMDEYQEYTMLCLLCGKGEDSISVLPDDPRQMAPLF
SIO_010081: CHURC1
subclass of: SO_0000673
so part of: CHURC1
location: complement(join(4049949..4050041,4051853..4051923,4052652..4052787,4060647..4060685))
location: region:4049949-4060685:-1
so has part: feature:4060647-4060685:-1:exon
so has part: feature:4052652-4052787:-1:exon
so has part: feature:4051853-4051923:-1:exon
so has part: feature:4049949-4050041:-1:exon

XP_038621379.1
type: Protein
SIO_000068: ncbiprotein

position:4049949:-1
position: 4049949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4060685:-1
position: 4060685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060647-4060685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4052652-4052787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4051853-4051923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4049949-4050041:-1:exon

CHURC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHURC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Churchill isoform X2
translation: MCGACVEKEYPDRGNTCLENGSFLLNYIGCAMCSKRDFVLVTNKATKEEDGEEIVTYDRVYHAVSVMWQRGRFYQRPPR
SIO_010081: CHURC1
subclass of: SO_0000673
so part of: CHURC1
location: complement(join(4049977..4050041,4052652..4052787,4060647..4060685))
location: region:4049977-4060685:-1
so has part: feature:4060647-4060685:-1:exon
so has part: feature:4052652-4052787:-1:exon
so has part: feature:4049977-4050041:-1:exon

XP_038621380.1
type: Protein
SIO_000068: ncbiprotein

position:4049977:-1
position: 4049977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060647-4060685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4052652-4052787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4049977-4050041:-1:exon

LOC119944860
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944860
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4067171..4067308)
location: region:4067171-4067308:-1
so has part: feature:4067171-4067308:-1:exon
subclass of: SO_0000578

119944860
type: Gene
SIO_000068: ncbigene

position:4067171:-1
position: 4067171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4067308:-1
position: 4067308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4067171-4067308:-1:exon

LOC119944860
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944860
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456006.1
SIO_010081: LOC119944860
subclass of: SO_0000673
so part of: LOC119944860
location: complement(4067171..4067308)
location: region:4067171-4067308:-1
so has part: feature:4067171-4067308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4067171-4067308:-1:exon

LOC119944825
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944825
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4174659..4174796)
location: region:4174659-4174796:-1
so has part: feature:4174659-4174796:-1:exon
subclass of: SO_0000578

119944825
type: Gene
SIO_000068: ncbigene

position:4174659:-1
position: 4174659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4174796:-1
position: 4174796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4174659-4174796:-1:exon

LOC119944825
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944825
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455973.1
SIO_010081: LOC119944825
subclass of: SO_0000673
so part of: LOC119944825
location: complement(4174659..4174796)
location: region:4174659-4174796:-1
so has part: feature:4174659-4174796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4174659-4174796:-1:exon

SPTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SPTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4188253..4301064
location: region:4188253-4301064:1
so has part: feature:4188253-4301064:1:exon
subclass of: SO_0000010

119944489
type: Gene
SIO_000068: ncbigene

position:4188253:1
position: 4188253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4301064:1
position: 4301064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4188253-4301064:1:exon

SPTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SPTB
product: spectrin beta, erythrocytic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765433.1
SIO_010081: SPTB
subclass of: SO_0000673
so part of: SPTB
location: join(4188253..4188442,4199415..4199566,4201598..4201771,4202989..4203080,4203949..4204029,4205087..4205202,4205965..4206077,4206528..4206715,4212075..4212192,4212940..4213098,4221861..4222163,4223113..4223263,4228112..4228982,4230592..4230729,4250372..4251128,4254279..4254481,4254977..4255067,4256434..4256580,4257355..4257618,4257889..4258095,4258241..4258330,4259406..4259684,4264542..4264672,4265801..4266005,4267091..4267465,4269764..4270008,4271344..4271482,4271705..4271789,4272602..4272798,4273332..4273384,4274152..4274230,4293054..4293289,4294465..4294638,4296285..4296327,4297078..4301064)
location: region:4188253-4301064:1
so has part: feature:4188253-4188442:1:exon
so has part: feature:4199415-4199566:1:exon
so has part: feature:4201598-4201771:1:exon
so has part: feature:4202989-4203080:1:exon
so has part: feature:4203949-4204029:1:exon
so has part: feature:4205087-4205202:1:exon
so has part: feature:4205965-4206077:1:exon
so has part: feature:4206528-4206715:1:exon
so has part: feature:4212075-4212192:1:exon
so has part: feature:4212940-4213098:1:exon
so has part: feature:4221861-4222163:1:exon
so has part: feature:4223113-4223263:1:exon
so has part: feature:4228112-4228982:1:exon
so has part: feature:4230592-4230729:1:exon
so has part: feature:4250372-4251128:1:exon
so has part: feature:4254279-4254481:1:exon
so has part: feature:4254977-4255067:1:exon
so has part: feature:4256434-4256580:1:exon
so has part: feature:4257355-4257618:1:exon
so has part: feature:4257889-4258095:1:exon
so has part: feature:4258241-4258330:1:exon
so has part: feature:4259406-4259684:1:exon
so has part: feature:4264542-4264672:1:exon
so has part: feature:4265801-4266005:1:exon
so has part: feature:4267091-4267465:1:exon
so has part: feature:4269764-4270008:1:exon
so has part: feature:4271344-4271482:1:exon
so has part: feature:4271705-4271789:1:exon
so has part: feature:4272602-4272798:1:exon
so has part: feature:4273332-4273384:1:exon
so has part: feature:4274152-4274230:1:exon
so has part: feature:4293054-4293289:1:exon
so has part: feature:4294465-4294638:1:exon
so has part: feature:4296285-4296327:1:exon
so has part: feature:4297078-4301064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4188253-4188442:1:exon

position:4188442:1
position: 4188442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4199415-4199566:1:exon

position:4199415:1
position: 4199415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199566:1
position: 4199566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4201598-4201771:1:exon

position:4201598:1
position: 4201598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4201771:1
position: 4201771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4202989-4203080:1:exon

position:4202989:1
position: 4202989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4203080:1
position: 4203080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4203949-4204029:1:exon

position:4203949:1
position: 4203949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4204029:1
position: 4204029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4205087-4205202:1:exon

position:4205087:1
position: 4205087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4205202:1
position: 4205202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4205965-4206077:1:exon

position:4205965:1
position: 4205965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206077:1
position: 4206077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4206528-4206715:1:exon

position:4206528:1
position: 4206528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206715:1
position: 4206715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4212075-4212192:1:exon

position:4212075:1
position: 4212075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212192:1
position: 4212192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4212940-4213098:1:exon

position:4212940:1
position: 4212940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213098:1
position: 4213098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4221861-4222163:1:exon

position:4221861:1
position: 4221861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4222163:1
position: 4222163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4223113-4223263:1:exon

position:4223113:1
position: 4223113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4223263:1
position: 4223263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4228112-4228982:1:exon

position:4228112:1
position: 4228112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4228982:1
position: 4228982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4230592-4230729:1:exon

position:4230592:1
position: 4230592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230729:1
position: 4230729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4250372-4251128:1:exon

position:4250372:1
position: 4250372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251128:1
position: 4251128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4254279-4254481:1:exon

position:4254279:1
position: 4254279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254481:1
position: 4254481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4254977-4255067:1:exon

position:4254977:1
position: 4254977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4255067:1
position: 4255067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4256434-4256580:1:exon

position:4256434:1
position: 4256434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4256580:1
position: 4256580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4257355-4257618:1:exon

position:4257355:1
position: 4257355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4257618:1
position: 4257618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4257889-4258095:1:exon

position:4257889:1
position: 4257889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4258095:1
position: 4258095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4258241-4258330:1:exon

position:4258241:1
position: 4258241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4258330:1
position: 4258330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4259406-4259684:1:exon

position:4259406:1
position: 4259406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4259684:1
position: 4259684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4264542-4264672:1:exon

position:4264542:1
position: 4264542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4264672:1
position: 4264672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4265801-4266005:1:exon

position:4265801:1
position: 4265801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4266005:1
position: 4266005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4267091-4267465:1:exon

position:4267091:1
position: 4267091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4267465:1
position: 4267465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4269764-4270008:1:exon

position:4269764:1
position: 4269764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4270008:1
position: 4270008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4271344-4271482:1:exon

position:4271344:1
position: 4271344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4271482:1
position: 4271482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4271705-4271789:1:exon

position:4271705:1
position: 4271705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4271789:1
position: 4271789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4272602-4272798:1:exon

position:4272602:1
position: 4272602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4272798:1
position: 4272798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4273332-4273384:1:exon

position:4273332:1
position: 4273332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273384:1
position: 4273384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4274152-4274230:1:exon

position:4274152:1
position: 4274152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274230:1
position: 4274230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4293054-4293289:1:exon

position:4293054:1
position: 4293054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4293289:1
position: 4293289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4294465-4294638:1:exon

position:4294465:1
position: 4294465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4294638:1
position: 4294638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4296285-4296327:1:exon

position:4296285:1
position: 4296285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296327:1
position: 4296327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4297078-4301064:1:exon

position:4297078:1
position: 4297078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SPTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spectrin beta chain, erythrocytic
translation: MTSAAELGSPAGPGPHGSGSGSGSGIIPQSGRIHARWDEPPAELDNDNSSARLFERSRIKALADEREVVQKKTFTKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPNVSVSNFTSSWKDGLAFNALIHKHRPDLIDFEKLKHSNARHNLEHAFNVAERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAMETEKMIDKYSGLASDLLTWIEQTIAVLNSRKFANSLDGVQRQLQTFSSYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPHEGKLVSDINRAWESLEEAEYRRELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVAQDNFGCDLAAVEAAKKKHEAIETDTAAYEERVKALEKLAQELEQENYHDMKHIKAHKDNILRMWAYLLELLQARRHRLEMTLALQKLFQDMLHSIDWMDELKIHLLSSEYGKHLLEVEDLLQKHKLLEADISIQADKVRSIGEAALQFASGKDYQPCDPKVIEDRVKHLELCFSELSSMAAGRKARLEQSKRLWKFIWDMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLEAHLEQTIHEAEGMVVRKQFGHPQIEARIQAVSVLWSQLQELAAFRKKNLQDAENFFQFQGDADELQAWLRDALRLLSGEDVGQDEGATRALGKKHKDFLEELEESREVLEHLEQQAQGFPQEFRDAPEVGNRLAAIRDLYQQVLAQADLRRQRLQDALGLYTVFGETDACELWMSEKEKWLEQMDLPDTLEDLEVVQHRFDILDQEMKTLMVQIDGVNQAANSLVNSGHPRSREVKKCQDHLNARWQKFQALVLERRKAVDSALSVHNYCVDCEETGKWILDKTKVVESTQDLGRDLAGVIAIQRKLYGLNRDVTAIQGRMGALTQESQRLVQEHPELEEDITKRQDYIEDLWQGLQRALKGQEASLGEASQLQQFLQDLDDFQAWLFTAQKVVASEEAPESLPEAEHLLQQHAAIKDEIDGHLADYQKVKAAGERVTQGQSDPEYQLLGQRLEGVDAGWAALGKMWENRGRFLKQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLATMKSNNTKVLGVVDSGNELLAEGNIYSDKIGEKVQQIEERHKRNNERSQEVELLLKDNLDLQNFLQNCQELTLWINDKLLTSQDVSYDDSQNLHNKWLKHQAFMAELASNQAWLEKVDEEGKQLIEQKPQFAAVVTPRLDVLHRLWDELQTTSQEKAQRLFDANRSDLHAQTYADLNKWISEMEEQLRSDDQGKDLTTVNRMLAKLKRVEDQVNVRKKELGELLSLGSALGEEEEREEPSIERRFLDLLEPLEKRRKELQSSKAKLQINRDLEDETLWVDERLPLAQSTDYGTNLQTVQLLMKKNQTLQNELTGHAPRIEDVLQRGKEMVASADVDCRDIEEWLGSLQGSWDSLQHATAQRLQRLQDASEAQQYYLDAGEAEAWISEQELYVISDETPQDEESAIVMLKRHLRQQQAVEEYGKNIKQLAGRAQRLLSAGHPEGEQIIRLQGQVDKQYAGLKEMAEERKRKLENMYHLFQLKREADDLEQWIAEREVVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDHVNAVIERLIDNGHGEAATIAEWKDGLNESWADLLELIDTRMQLLAASYDLHRYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDWATRLQTAYAGEKADAIQNKEQEVSSAWQALLDACAGRRTQLVDTADKFRFFSMVRDLLSWMESIIRQIETQEKPRDVSSVELLMKYHQGIMAEIETRTKNFSTCLELGNGLLQRQHQASEEIKVKLTQ…
SIO_010081: SPTB
subclass of: SO_0000673
so part of: SPTB
location: join(4188253..4188442,4199415..4199566,4201598..4201771,4202989..4203080,4203949..4204029,4205087..4205202,4205965..4206077,4206528..4206715,4212075..4212192,4212940..4213098,4221861..4222163,4223113..4223263,4228112..4228982,4230592..4230729,4250372..4251128,4254279..4254481,4254977..4255067,4256434..4256580,4257355..4257618,4257889..4258095,4258241..4258330,4259406..4259684,4264542..4264672,4265801..4266005,4267091..4267465,4269764..4270008,4271344..4271482,4271705..4271789,4272602..4272798,4273332..4273384,4274152..4274230,4293054..4293289,4294465..4294638,4296285..4296327,4297078..4297245)
location: region:4188253-4297245:1
so has part: feature:4188253-4188442:1:exon
so has part: feature:4199415-4199566:1:exon
so has part: feature:4201598-4201771:1:exon
so has part: feature:4202989-4203080:1:exon
so has part: feature:4203949-4204029:1:exon
so has part: feature:4205087-4205202:1:exon
so has part: feature:4205965-4206077:1:exon
so has part: feature:4206528-4206715:1:exon
so has part: feature:4212075-4212192:1:exon
so has part: feature:4212940-4213098:1:exon
so has part: feature:4221861-4222163:1:exon
so has part: feature:4223113-4223263:1:exon
so has part: feature:4228112-4228982:1:exon
so has part: feature:4230592-4230729:1:exon
so has part: feature:4250372-4251128:1:exon
so has part: feature:4254279-4254481:1:exon
so has part: feature:4254977-4255067:1:exon
so has part: feature:4256434-4256580:1:exon
so has part: feature:4257355-4257618:1:exon
so has part: feature:4257889-4258095:1:exon
so has part: feature:4258241-4258330:1:exon
so has part: feature:4259406-4259684:1:exon
so has part: feature:4264542-4264672:1:exon
so has part: feature:4265801-4266005:1:exon
so has part: feature:4267091-4267465:1:exon
so has part: feature:4269764-4270008:1:exon
so has part: feature:4271344-4271482:1:exon
so has part: feature:4271705-4271789:1:exon
so has part: feature:4272602-4272798:1:exon
so has part: feature:4273332-4273384:1:exon
so has part: feature:4274152-4274230:1:exon
so has part: feature:4293054-4293289:1:exon
so has part: feature:4294465-4294638:1:exon
so has part: feature:4296285-4296327:1:exon
so has part: feature:4297078-4297245:1:exon

XP_038621361.1
type: Protein
SIO_000068: ncbiprotein

position:4297245:1
position: 4297245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4188253-4188442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4199415-4199566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4201598-4201771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4202989-4203080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4203949-4204029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4205087-4205202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4205965-4206077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4206528-4206715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4212075-4212192:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4212940-4213098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221861-4222163:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4223113-4223263:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4228112-4228982:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4230592-4230729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4250372-4251128:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4254279-4254481:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4254977-4255067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4256434-4256580:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4257355-4257618:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4257889-4258095:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4258241-4258330:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4259406-4259684:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4264542-4264672:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4265801-4266005:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4267091-4267465:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4269764-4270008:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4271344-4271482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4271705-4271789:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4272602-4272798:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4273332-4273384:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4274152-4274230:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4293054-4293289:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4294465-4294638:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4296285-4296327:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4297078-4297245:1:exon

PLEKHG3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PLEKHG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4301356..4341015)
location: region:4301356-4341015:-1
so has part: feature:4301356-4341015:-1:exon
subclass of: SO_0000010

119944648
type: Gene
SIO_000068: ncbigene

position:4301356:-1
position: 4301356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4341015:-1
position: 4341015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4301356-4341015:-1:exon

PLEKHG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PLEKHG3
product: pleckstrin homology and RhoGEF domain containing G3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765699.1
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301356..4302392,4303216..4304620,4306117..4306230,4306729..4307115,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316350,4340980..4341015))
location: region:4301356-4341015:-1
so has part: feature:4340980-4341015:-1:exon
so has part: feature:4315964-4316350:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306729-4307115:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301356-4302392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4340980-4341015:-1:exon

position:4340980:-1
position: 4340980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4315964-4316350:-1:exon

position:4315964:-1
position: 4315964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316350:-1
position: 4316350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4314696-4314793:-1:exon

position:4314696:-1
position: 4314696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314793:-1
position: 4314793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4312632-4312701:-1:exon

position:4312632:-1
position: 4312632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4312701:-1
position: 4312701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4312229-4312275:-1:exon

position:4312229:-1
position: 4312229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4312275:-1
position: 4312275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4311970-4312120:-1:exon

position:4311970:-1
position: 4311970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4312120:-1
position: 4312120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4311734-4311862:-1:exon

position:4311734:-1
position: 4311734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4311862:-1
position: 4311862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4311265-4311447:-1:exon

position:4311265:-1
position: 4311265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4311447:-1
position: 4311447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4310950-4311042:-1:exon

position:4310950:-1
position: 4310950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4311042:-1
position: 4311042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4310341-4310427:-1:exon

position:4310341:-1
position: 4310341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4310427:-1
position: 4310427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4309952-4309985:-1:exon

position:4309952:-1
position: 4309952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309985:-1
position: 4309985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4309557-4309646:-1:exon

position:4309557:-1
position: 4309557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309646:-1
position: 4309646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4308241-4308279:-1:exon

position:4308241:-1
position: 4308241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4308279:-1
position: 4308279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4307534-4307553:-1:exon

position:4307534:-1
position: 4307534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307553:-1
position: 4307553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4306729-4307115:-1:exon

position:4306729:-1
position: 4306729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307115:-1
position: 4307115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4306117-4306230:-1:exon

position:4306117:-1
position: 4306117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306230:-1
position: 4306230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4303216-4304620:-1:exon

position:4303216:-1
position: 4303216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4304620:-1
position: 4304620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4301356-4302392:-1:exon

position:4302392:-1
position: 4302392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PLEKHG3
product: pleckstrin homology and RhoGEF domain containing G3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765700.1
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301356..4302392,4303216..4304620,4306117..4306230,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316350,4330663..4330766))
location: region:4301356-4330766:-1
so has part: feature:4330663-4330766:-1:exon
so has part: feature:4315964-4316350:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301356-4302392:-1:exon

position:4330766:-1
position: 4330766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4330663-4330766:-1:exon

position:4330663:-1
position: 4330663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4315964-4316350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4314696-4314793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312632-4312701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4312229-4312275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4311970-4312120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311734-4311862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4311265-4311447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310950-4311042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4310341-4310427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4309952-4309985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4309557-4309646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4308241-4308279:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4307534-4307553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4306117-4306230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4303216-4304620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4301356-4302392:-1:exon

PLEKHG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PLEKHG3
product: pleckstrin homology and RhoGEF domain containing G3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765698.1
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301356..4302392,4303216..4304620,4306117..4306230,4306729..4307115,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316350,4330663..4330766))
location: region:4301356-4330766:-1
so has part: feature:4330663-4330766:-1:exon
so has part: feature:4315964-4316350:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306729-4307115:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301356-4302392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4330663-4330766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4315964-4316350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4314696-4314793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312632-4312701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4312229-4312275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4311970-4312120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311734-4311862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4311265-4311447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310950-4311042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4310341-4310427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4309952-4309985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4309557-4309646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4308241-4308279:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4307534-4307553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4306729-4307115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4306117-4306230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4303216-4304620:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4301356-4302392:-1:exon

PLEKHG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PLEKHG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 3 isoform X2
translation: MPVSASLHPDSTQERPASLTSTASSSGSSRDSRAMEEPGGGEPGPEGGEGAPRSLPHLNSNNSAGSWLNGQGGPSFSPLAFRAPAGDNQHSYLGRVVREIVETERMYVQDLRSIVEDYLLKIIDTPGLLKPEQVSALFGNIENIYELNSQLLKDLDGCNGDPVAVAYCFVDRSEEFDIYTQYCTNYPNSVAALTECMREKHQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFGKEEGFEVVEFAIYTMTCVAWYINDMKRKHEQAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRNERTFFLFDKALLITKKRGDHFVYKTHIPCSSLMLIESTRESLCFTVTHYKHNKQQYTIQAKSADEKRGWTHHIKRLILENHHTTIPQKVKEAILEMDSYYPTRYQYSPDRLKKAMDEAPLKGCQGRRRSEPTKQLLKQLNQKARPAGLKDSGHREHEVAKGCKRPSGQSSSSPQKCVNLAPDSSGSEAWLDRDPEEVLGPAPLPLDHSPERPSDLESSPRTPERLLNLPAEVLATDLPAPEVEPALPESQEDLKTLSSEEEEEEEGAAPESGSILPPSVLDQASVIAEKFISSFSRRSSLALEDGWAGGFGTVHLASQSGSLLSLEGGEKGLYPRSPDDSPDCFPAPEVAPGARAAREPRSPLDRTVPPSPGGPGEAERSPCKKKESLLSTQDRLLLDKIKNYYDHAEHHDASFSLRRRESFSYIPKGLVRNSVTKFNSFPRPEPRAPAERKRLAGLRPASETRSDLPTPGWGDPGDPAPIQDSEFRPSSELVKIWDGMDRSSGARRGLAGKGGREPASGQENGFDLQEPLFILEEHELGAIAEEVPGASSRSPQTHPARLARELKELAKELGSGEPELPATLHPRIVQFSPVMDADLGQRVTNKVYQLARQYSLRIKRRKPVGPNRSEGEPDGGGPGPRLPLVLEEVPRPATSQGKKPALSLPRSEGDNQPRHSSSARSRTPPCCSFGPPSSSRWVPSSLGEQRPPARSPLSPTEGETFHWPDVRQLCSKYACGAGAPQARLGPRRGGPVSRSRSVPDGMTEPAQPEHVNRCFSLEAPRGREDEALFVAADVILDDNRRVIVLEKGPRPEPPTTAEEGEQDSCGQCQSPTSHMAVVEHHKAYQELEEPRGRQEGLAPDSLLPSSRVTAGQQGLVRTLRAKFQTLNSNG
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301689..4302392,4303216..4304620,4306117..4306230,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316311))
location: region:4301689-4316311:-1
so has part: feature:4315964-4316311:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301689-4302392:-1:exon

XP_038621628.1
type: Protein
SIO_000068: ncbiprotein

position:4301689:-1
position: 4301689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316311:-1
position: 4316311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4315964-4316311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4314696-4314793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4312632-4312701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312229-4312275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4311970-4312120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4311734-4311862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311265-4311447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4310950-4311042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310341-4310427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4309952-4309985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4309557-4309646:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4308241-4308279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4307534-4307553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4306117-4306230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4303216-4304620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4301689-4302392:-1:exon

PLEKHG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PLEKHG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 3 isoform X1
translation: MPVSASLHPDSTQERPASLTSTASSSGSSRDSRAMEEPGGGEPGPEGGEGAPRSLPHLNSNNSAGSWLNGQGGPSFSPLAFRAPAGDNQHSYLGRVVREIVETERMYVQDLRSIVEDYLLKIIDTPGLLKPEQVSALFGNIENIYELNSQLLKDLDGCNGDPVAVAYCFVDRSEEFDIYTQYCTNYPNSVAALTECMREKHQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFGKEEGFEVVEFAIYTMTCVAWYINDMKRKHEQAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRNERTFFLFDKALLITKKRGDHFVYKTHIPCSSLMLIESTRESLCFTVTHYKHNKQQYTIQAKSADEKRGWTHHIKRLILENHHTTIPQKVKEAILEMDSYYPTRYQYSPDRLKKAMDEAPLKGCQGRRRSEPTKQLLKQLNQKARPAGLKHSDSAEALLDSREFRQPLFPWGQQSEFERAAQERDEKEEEEEQAFQHKTSPEDLPLSNGSEKRAGAEPQGSEEEEEEEKEEEEKEEEEEEEEESLEIAEQVADFASSLLAALHCWHYRANALLFSRGATDSGHREHEVAKGCKRPSGQSSSSPQKCVNLAPDSSGSEAWLDRDPEEVLGPAPLPLDHSPERPSDLESSPRTPERLLNLPAEVLATDLPAPEVEPALPESQEDLKTLSSEEEEEEEGAAPESGSILPPSVLDQASVIAEKFISSFSRRSSLALEDGWAGGFGTVHLASQSGSLLSLEGGEKGLYPRSPDDSPDCFPAPEVAPGARAAREPRSPLDRTVPPSPGGPGEAERSPCKKKESLLSTQDRLLLDKIKNYYDHAEHHDASFSLRRRESFSYIPKGLVRNSVTKFNSFPRPEPRAPAERKRLAGLRPASETRSDLPTPGWGDPGDPAPIQDSEFRPSSELVKIWDGMDRSSGARRGLAGKGGREPASGQENGFDLQEPLFILEEHELGAIAEEVPGASSRSPQTHPARLARELKELAKELGSGEPELPATLHPRIVQFSPVMDADLGQRVTNKVYQLARQYSLRIKRRKPVGPNRSEGEPDGGGPGPRLPLVLEEVPRPATSQGKKPALSLPRSEGDNQPRHSSSARSRTPPCCSFGPPSSSRWVPSSLGEQRPPARSPLSPTEGETFHWPDVRQLCSKYACGAGAPQARLGPRRGGPVSRSRSVPDGMTEPAQPEHVNRCFSLEAPRGREDEALFVAADVILDDNRRVIVLEKGPRPEPPTTAEEGEQDSCGQCQSPTSHMAVVEHHKAYQELEEPRGRQEGLAPDSLLPSSRVTAGQQGLVRTLRAKFQTLNSNG
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301689..4302392,4303216..4304620,4306117..4306230,4306729..4307115,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316311))
location: region:4301689-4316311:-1
so has part: feature:4315964-4316311:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306729-4307115:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301689-4302392:-1:exon

XP_038621626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4315964-4316311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4314696-4314793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4312632-4312701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312229-4312275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4311970-4312120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4311734-4311862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311265-4311447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4310950-4311042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310341-4310427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4309952-4309985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4309557-4309646:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4308241-4308279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4307534-4307553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4306729-4307115:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4306117-4306230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4303216-4304620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4301689-4302392:-1:exon

PLEKHG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PLEKHG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 3 isoform X1
translation: MPVSASLHPDSTQERPASLTSTASSSGSSRDSRAMEEPGGGEPGPEGGEGAPRSLPHLNSNNSAGSWLNGQGGPSFSPLAFRAPAGDNQHSYLGRVVREIVETERMYVQDLRSIVEDYLLKIIDTPGLLKPEQVSALFGNIENIYELNSQLLKDLDGCNGDPVAVAYCFVDRSEEFDIYTQYCTNYPNSVAALTECMREKHQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFGKEEGFEVVEFAIYTMTCVAWYINDMKRKHEQAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRNERTFFLFDKALLITKKRGDHFVYKTHIPCSSLMLIESTRESLCFTVTHYKHNKQQYTIQAKSADEKRGWTHHIKRLILENHHTTIPQKVKEAILEMDSYYPTRYQYSPDRLKKAMDEAPLKGCQGRRRSEPTKQLLKQLNQKARPAGLKHSDSAEALLDSREFRQPLFPWGQQSEFERAAQERDEKEEEEEQAFQHKTSPEDLPLSNGSEKRAGAEPQGSEEEEEEEKEEEEKEEEEEEEEESLEIAEQVADFASSLLAALHCWHYRANALLFSRGATDSGHREHEVAKGCKRPSGQSSSSPQKCVNLAPDSSGSEAWLDRDPEEVLGPAPLPLDHSPERPSDLESSPRTPERLLNLPAEVLATDLPAPEVEPALPESQEDLKTLSSEEEEEEEGAAPESGSILPPSVLDQASVIAEKFISSFSRRSSLALEDGWAGGFGTVHLASQSGSLLSLEGGEKGLYPRSPDDSPDCFPAPEVAPGARAAREPRSPLDRTVPPSPGGPGEAERSPCKKKESLLSTQDRLLLDKIKNYYDHAEHHDASFSLRRRESFSYIPKGLVRNSVTKFNSFPRPEPRAPAERKRLAGLRPASETRSDLPTPGWGDPGDPAPIQDSEFRPSSELVKIWDGMDRSSGARRGLAGKGGREPASGQENGFDLQEPLFILEEHELGAIAEEVPGASSRSPQTHPARLARELKELAKELGSGEPELPATLHPRIVQFSPVMDADLGQRVTNKVYQLARQYSLRIKRRKPVGPNRSEGEPDGGGPGPRLPLVLEEVPRPATSQGKKPALSLPRSEGDNQPRHSSSARSRTPPCCSFGPPSSSRWVPSSLGEQRPPARSPLSPTEGETFHWPDVRQLCSKYACGAGAPQARLGPRRGGPVSRSRSVPDGMTEPAQPEHVNRCFSLEAPRGREDEALFVAADVILDDNRRVIVLEKGPRPEPPTTAEEGEQDSCGQCQSPTSHMAVVEHHKAYQELEEPRGRQEGLAPDSLLPSSRVTAGQQGLVRTLRAKFQTLNSNG
SIO_010081: PLEKHG3
subclass of: SO_0000673
so part of: PLEKHG3
location: complement(join(4301689..4302392,4303216..4304620,4306117..4306230,4306729..4307115,4307534..4307553,4308241..4308279,4309557..4309646,4309952..4309985,4310341..4310427,4310950..4311042,4311265..4311447,4311734..4311862,4311970..4312120,4312229..4312275,4312632..4312701,4314696..4314793,4315964..4316311))
location: region:4301689-4316311:-1
so has part: feature:4315964-4316311:-1:exon
so has part: feature:4314696-4314793:-1:exon
so has part: feature:4312632-4312701:-1:exon
so has part: feature:4312229-4312275:-1:exon
so has part: feature:4311970-4312120:-1:exon
so has part: feature:4311734-4311862:-1:exon
so has part: feature:4311265-4311447:-1:exon
so has part: feature:4310950-4311042:-1:exon
so has part: feature:4310341-4310427:-1:exon
so has part: feature:4309952-4309985:-1:exon
so has part: feature:4309557-4309646:-1:exon
so has part: feature:4308241-4308279:-1:exon
so has part: feature:4307534-4307553:-1:exon
so has part: feature:4306729-4307115:-1:exon
so has part: feature:4306117-4306230:-1:exon
so has part: feature:4303216-4304620:-1:exon
so has part: feature:4301689-4302392:-1:exon

XP_038621627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4315964-4316311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4314696-4314793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4312632-4312701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312229-4312275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4311970-4312120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4311734-4311862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311265-4311447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4310950-4311042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4310341-4310427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4309952-4309985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4309557-4309646:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4308241-4308279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4307534-4307553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4306729-4307115:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4306117-4306230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4303216-4304620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4301689-4302392:-1:exon

LOC119944854
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944854
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4420642..4420779)
location: region:4420642-4420779:-1
so has part: feature:4420642-4420779:-1:exon
subclass of: SO_0000578

119944854
type: Gene
SIO_000068: ncbigene

position:4420642:-1
position: 4420642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4420779:-1
position: 4420779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4420642-4420779:-1:exon

LOC119944854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944854
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456000.1
SIO_010081: LOC119944854
subclass of: SO_0000673
so part of: LOC119944854
location: complement(4420642..4420779)
location: region:4420642-4420779:-1
so has part: feature:4420642-4420779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4420642-4420779:-1:exon

HSPA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: HSPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4461000..4464404)
location: region:4461000-4464404:-1
so has part: feature:4461000-4464404:-1:exon
subclass of: SO_0000010

119944554
type: Gene
SIO_000068: ncbigene

position:4461000:-1
position: 4461000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4464404:-1
position: 4464404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4461000-4464404:-1:exon

HSPA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HSPA2
product: heat shock protein family A (Hsp70) member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765548.1
SIO_010081: HSPA2
subclass of: SO_0000673
so part of: HSPA2
location: complement(4461000..4464404)
location: region:4461000-4464404:-1
so has part: feature:4461000-4464404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4461000-4464404:-1:exon

HSPA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: HSPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock-related 70 kDa protein 2
translation: MAARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKNIGANKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTASDKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYAYSIKQTVEDEKLRGKIGEQDKKKITDKCQEVINWLDRNQMAEKEEFEHKQKELERVCNPIISNLYQGGPGGGGSAASGGPTIEEVD
SIO_010081: HSPA2
subclass of: SO_0000673
so part of: HSPA2
location: complement(4462237..4464144)
location: region:4462237-4464144:-1
so has part: feature:4462237-4464144:-1:exon

XP_038621476.1
type: Protein
SIO_000068: ncbiprotein

position:4462237:-1
position: 4462237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4464144:-1
position: 4464144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4462237-4464144:-1:exon

ZBTB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZBTB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4480111..4539938)
location: region:4480111-4539938:-1
so has part: feature:4480111-4539938:-1:exon
subclass of: SO_0000010

119944532
type: Gene
SIO_000068: ncbigene

position:4480111:-1
position: 4480111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4539938:-1
position: 4539938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4480111-4539938:-1:exon

ZBTB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZBTB1
product: zinc finger and BTB domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765495.1
SIO_010081: ZBTB1
subclass of: SO_0000673
so part of: ZBTB1
location: complement(join(4480111..4480526,4489297..4491222,4539864..4539938))
location: region:4480111-4539938:-1
so has part: feature:4539864-4539938:-1:exon
so has part: feature:4489297-4491222:-1:exon
so has part: feature:4480111-4480526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4539864-4539938:-1:exon

position:4539864:-1
position: 4539864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4489297-4491222:-1:exon

position:4489297:-1
position: 4489297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491222:-1
position: 4491222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4480111-4480526:-1:exon

position:4480526:-1
position: 4480526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZBTB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 1 isoform X2
translation: MARPSHSSYVLQQLNNQREWGFLCDCCISIDDIYFQAHKAVLAACSSYFRMFFMNHQHSTAQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDADCSSSKCSSSAASNHNNKMIFGVRMYEDTVTRNGSEANRWCAEPSSTVNTPQNREPDEETLPLGTFPDQLFDVCKKSSVSKLSNSKDRVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTNRHSYQNARSFHRVLDARDGKDGNPKTDSSDKDASKAFSGQADKYRGDSSQAADDSSSAVGSRKNSTVESERAGEERSRASERKRIIVKMEPEDNPADELKDFNIIKVTDKDCNESSDNDELEDEPEEPFYRYYVDEEVGVKKNPRKSLKPRMSVNENERSGFEHSRHLNSKASPVHEDAENASCELCGLTITEEDLSSHYLSKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTVNGLGSSEEKMDLEENPDEQSEIREMMFAEMFDDLRDSHFQINSLQKKQLYKHSACPFRCPNCGQRFETENLVVEHMSSCLEQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVHTKEKQFVCQTCGKQFLRERQLRLHNDMHKGMASGEIGTSKPLEN
SIO_010081: ZBTB1
subclass of: SO_0000673
so part of: ZBTB1
location: complement(join(4480490..4480526,4489297..4491200))
location: region:4480490-4491200:-1
so has part: feature:4489297-4491200:-1:exon
so has part: feature:4480490-4480526:-1:exon

XP_038621423.1
type: Protein
SIO_000068: ncbiprotein

position:4480490:-1
position: 4480490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491200:-1
position: 4491200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4489297-4491200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4480490-4480526:-1:exon

ZBTB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZBTB1
product: zinc finger and BTB domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765494.1
SIO_010081: ZBTB1
subclass of: SO_0000673
so part of: ZBTB1
location: complement(join(4487682..4491222,4539864..4539938))
location: region:4487682-4539938:-1
so has part: feature:4539864-4539938:-1:exon
so has part: feature:4487682-4491222:-1:exon

position:4487682:-1
position: 4487682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4539864-4539938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4487682-4491222:-1:exon

ZBTB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZBTB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 1 isoform X1
translation: MARPSHSSYVLQQLNNQREWGFLCDCCISIDDIYFQAHKAVLAACSSYFRMFFMNHQHSTAQLNLSNMKISAECFDLILQFMYLGKIMTAPSSFEQFKVAMNYLQLYNVPDCLEDIQDADCSSSKCSSSAASNHNNKMIFGVRMYEDTVTRNGSEANRWCAEPSSTVNTPQNREPDEETLPLGTFPDQLFDVCKKSSVSKLSNSKDRVSRRFGRSFTCDSCGFGFSCEKLLDEHVLTCTNRHSYQNARSFHRVLDARDGKDGNPKTDSSDKDASKAFSGQADKYRGDSSQAADDSSSAVGSRKNSTVESERAGEERSRASERKRIIVKMEPEDNPADELKDFNIIKVTDKDCNESSDNDELEDEPEEPFYRYYVDEEVGVKKNPRKSLKPRMSVNENERSGFEHSRHLNSKASPVHEDAENASCELCGLTITEEDLSSHYLSKHIENICACGKCGQILVKGRQLQEHAQRCGEPQDLTVNGLGSSEEKMDLEENPDEQSEIREMMFAEMFDDLRDSHFQINSLQKKQLYKHSACPFRCPNCGQRFETENLVVEHMSSCLEQDMFKSAIMEENERDHRRKHFCNLCGKGFYQRCHLREHYTVHTKEKQFVCQTCGKQFLRERQLRLHNDMHKGMARYVCSICDQGNFRKHDHVRHMISHLSAGETICQVCFQIFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKHLKRT
SIO_010081: ZBTB1
subclass of: SO_0000673
so part of: ZBTB1
location: complement(4489053..4491200)
location: region:4489053-4491200:-1
so has part: feature:4489053-4491200:-1:exon

XP_038621422.1
type: Protein
SIO_000068: ncbiprotein

position:4489053:-1
position: 4489053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4489053-4491200:-1:exon

ZBTB25
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZBTB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4574806..4581553
location: region:4574806-4581553:1
so has part: feature:4574806-4581553:1:exon
subclass of: SO_0000010

119944592
type: Gene
SIO_000068: ncbigene

position:4574806:1
position: 4574806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4581553:1
position: 4581553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4574806-4581553:1:exon

ZBTB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZBTB25
product: zinc finger and BTB domain containing 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765590.1
SIO_010081: ZBTB25
subclass of: SO_0000673
so part of: ZBTB25
location: join(4574806..4574993,4580147..4581553)
location: region:4574806-4581553:1
so has part: feature:4574806-4574993:1:exon
so has part: feature:4580147-4581553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4574806-4574993:1:exon

position:4574993:1
position: 4574993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4580147-4581553:1:exon

position:4580147:1
position: 4580147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZBTB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 25 isoform X1
translation: MDTSSHSLVLLQQLNMQREFGFLCDCTVAIGDVYFKAHRAVLAAFSNYFKMIFIHQTSECIKIQPTDIQPDIFSYLLHIMYTGRGPKQSVDHGRLEEGIKFLHADYLSHLATEVNQALSPETVQSSNLYGIQISTAQKATVKEGLEAKENPSGKSAPRTAAPGDHHQLQLSLAIGLDDGTPGQPIPRPAAPPPEELPITSVSVKQERCDAESVVSPNHPSSSSEMTGPASAESSARRPLCQYCGEHFDSRNRLREHLHTHVSGSLPFGVPASILESNDLGDAHRPGADSGEALEGRRLGTFILKENERGPAQPGGCDNSLEPLQIGQLSLISKDTEPVELNCNFSFSRKRKISCGVCGHAFLRKSQLLEHMYAHKGQPYKYSRCPRFGNALAQRSQPYRDSWADGPHKSFGLPQDHLDSPCALESDLTQENVDTILVE
SIO_010081: ZBTB25
subclass of: SO_0000673
so part of: ZBTB25
location: join(4574821..4574993,4580147..4581290)
location: region:4574821-4581290:1
so has part: feature:4574821-4574993:1:exon
so has part: feature:4580147-4581290:1:exon

XP_038621518.1
type: Protein
SIO_000068: ncbiprotein

position:4574821:1
position: 4574821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4581290:1
position: 4581290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4574821-4574993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4580147-4581290:1:exon

ZBTB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZBTB25
product: zinc finger and BTB domain containing 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765591.1
SIO_010081: ZBTB25
subclass of: SO_0000673
so part of: ZBTB25
location: join(4574942..4574993,4580173..4581553)
location: region:4574942-4581553:1
so has part: feature:4574942-4574993:1:exon
so has part: feature:4580173-4581553:1:exon

position:4574942:1
position: 4574942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4574942-4574993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4580173-4581553:1:exon

position:4580173:1
position: 4580173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZBTB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 25 isoform X2
translation: MYTGRGPKQSVDHGRLEEGIKFLHADYLSHLATEVNQALSPETVQSSNLYGIQISTAQKATVKEGLEAKENPSGKSAPRTAAPGDHHQLQLSLAIGLDDGTPGQPIPRPAAPPPEELPITSVSVKQERCDAESVVSPNHPSSSSEMTGPASAESSARRPLCQYCGEHFDSRNRLREHLHTHVSGSLPFGVPASILESNDLGDAHRPGADSGEALEGRRLGTFILKENERGPAQPGGCDNSLEPLQIGQLSLISKDTEPVELNCNFSFSRKRKISCGVCGHAFLRKSQLLEHMYAHKGQPYKYSRCPRFGNALAQRSQPYRDSWADGPHKSFGLPQDHLDSPCALESDLTQENVDTILVE
SIO_010081: ZBTB25
subclass of: SO_0000673
so part of: ZBTB25
location: 4580211..4581290
location: region:4580211-4581290:1
so has part: feature:4580211-4581290:1:exon

XP_038621519.1
type: Protein
SIO_000068: ncbiprotein

position:4580211:1
position: 4580211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4580211-4581290:1:exon

AKAP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AKAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4607313..4616197)
location: region:4607313-4616197:-1
so has part: feature:4607313-4616197:-1:exon
subclass of: SO_0000010

119944593
type: Gene
SIO_000068: ncbigene

position:4607313:-1
position: 4607313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4616197:-1
position: 4616197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4607313-4616197:-1:exon

AKAP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AKAP5
product: A-kinase anchoring protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038765592.1
SIO_010081: AKAP5
subclass of: SO_0000673
so part of: AKAP5
location: complement(join(4607313..4609986,4616103..4616197))
location: region:4607313-4616197:-1
so has part: feature:4616103-4616197:-1:exon
so has part: feature:4607313-4609986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4616103-4616197:-1:exon

position:4616103:-1
position: 4616103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4607313-4609986:-1:exon

position:4609986:-1
position: 4609986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AKAP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AKAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 5
translation: MEAALPEIQVESKDHSQIQSSNELKTEANPPNEEQVEKSSFLCFKRRKKVAKALKFPKDDSEADFAALKYQSQCSNMDHTKADVSDQSPLPQGAWAAIKHLVPHRKRSSSSSKKQRCSEATEQLGKKSDDTHVTKKKTRSTYKFPCIKFSRDKKKRAVSEMTEESECVVKVKEVAGSSDMKTPTHQDDLTVKGKLTAEFSGSVPQGGGDFVSPNVSEIIISAQENVVSEEPKIDTGQKNQVVQAETTTVENDSGDLEKNHAVQLQQESVIDTLEEADQLPYTTDPTSSVVSEKSPLNSPEVPTKPIMEETKSALEKGPKWEDGDRDLTPSEKNESKVSSGESDFTETVVSVKPLKLEEYKKMEPIAIIITDTEICEYDVTKSRNVPKQLLISEQYEKLLIETASSLVKKAIQLSVEQLVNEMASDNNKISNFLQ
SIO_010081: AKAP5
subclass of: SO_0000673
so part of: AKAP5
location: complement(4608144..4609448)
location: region:4608144-4609448:-1
so has part: feature:4608144-4609448:-1:exon

XP_038621520.1
type: Protein
SIO_000068: ncbiprotein

position:4608144:-1
position: 4608144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4609448:-1
position: 4609448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4608144-4609448:-1:exon

MTHFD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MTHFD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4634230..4715057)
location: region:4634230-4715057:-1
so has part: feature:4634230-4715057:-1:exon
subclass of: SO_0000010

119944519
type: Gene
SIO_000068: ncbigene

position:4634230:-1
position: 4634230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715057:-1
position: 4715057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4634230-4715057:-1:exon

MTHFD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTHFD1
product: methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038765475.1
SIO_010081: MTHFD1
subclass of: SO_0000673
so part of: MTHFD1
location: complement(join(4634230..4634387,4634567..4634660,4639763..4639915,4640776..4640883,4642929..4643106,4646717..4646817,4648389..4648430,4650253..4650392,4650542..4650653,4650902..4650970,4653055..4653195,4653885..4653961,4657755..4657857,4658268..4658342,4659668..4659775,4660415..4660461,4663636..4663772,4666394..4666567,4667609..4667706,4669230..4669357,4672710..4672821,4674751..4674887,4682608..4682708,4685380..4685516,4689864..4689917,4692062..4692121,4694300..4694384,4714861..4715057))
location: region:4634230-4715057:-1
so has part: feature:4714861-4715057:-1:exon
so has part: feature:4694300-4694384:-1:exon
so has part: feature:4692062-4692121:-1:exon
so has part: feature:4689864-4689917:-1:exon
so has part: feature:4685380-4685516:-1:exon
so has part: feature:4682608-4682708:-1:exon
so has part: feature:4674751-4674887:-1:exon
so has part: feature:4672710-4672821:-1:exon
so has part: feature:4669230-4669357:-1:exon
so has part: feature:4667609-4667706:-1:exon
so has part: feature:4666394-4666567:-1:exon
so has part: feature:4663636-4663772:-1:exon
so has part: feature:4660415-4660461:-1:exon
so has part: feature:4659668-4659775:-1:exon
so has part: feature:4658268-4658342:-1:exon
so has part: feature:4657755-4657857:-1:exon
so has part: feature:4653885-4653961:-1:exon
so has part: feature:4653055-4653195:-1:exon
so has part: feature:4650902-4650970:-1:exon
so has part: feature:4650542-4650653:-1:exon
so has part: feature:4650253-4650392:-1:exon
so has part: feature:4648389-4648430:-1:exon
so has part: feature:4646717-4646817:-1:exon
so has part: feature:4642929-4643106:-1:exon
so has part: feature:4640776-4640883:-1:exon
so has part: feature:4639763-4639915:-1:exon
so has part: feature:4634567-4634660:-1:exon
so has part: feature:4634230-4634387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4714861-4715057:-1:exon

position:4714861:-1
position: 4714861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4694300-4694384:-1:exon

position:4694300:-1
position: 4694300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4694384:-1
position: 4694384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4692062-4692121:-1:exon

position:4692062:-1
position: 4692062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692121:-1
position: 4692121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4689864-4689917:-1:exon

position:4689864:-1
position: 4689864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4689917:-1
position: 4689917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4685380-4685516:-1:exon

position:4685380:-1
position: 4685380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685516:-1
position: 4685516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4682608-4682708:-1:exon

position:4682608:-1
position: 4682608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682708:-1
position: 4682708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4674751-4674887:-1:exon

position:4674751:-1
position: 4674751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674887:-1
position: 4674887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4672710-4672821:-1:exon

position:4672710:-1
position: 4672710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4672821:-1
position: 4672821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4669230-4669357:-1:exon

position:4669230:-1
position: 4669230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669357:-1
position: 4669357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4667609-4667706:-1:exon

position:4667609:-1
position: 4667609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667706:-1
position: 4667706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4666394-4666567:-1:exon

position:4666394:-1
position: 4666394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666567:-1
position: 4666567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4663636-4663772:-1:exon

position:4663636:-1
position: 4663636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663772:-1
position: 4663772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4660415-4660461:-1:exon

position:4660415:-1
position: 4660415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4660461:-1
position: 4660461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4659668-4659775:-1:exon

position:4659668:-1
position: 4659668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659775:-1
position: 4659775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4658268-4658342:-1:exon

position:4658268:-1
position: 4658268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658342:-1
position: 4658342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4657755-4657857:-1:exon

position:4657755:-1
position: 4657755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657857:-1
position: 4657857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4653885-4653961:-1:exon

position:4653885:-1
position: 4653885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4653961:-1
position: 4653961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4653055-4653195:-1:exon

position:4653055:-1
position: 4653055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4653195:-1
position: 4653195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4650902-4650970:-1:exon

position:4650902:-1
position: 4650902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650970:-1
position: 4650970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4650542-4650653:-1:exon

position:4650542:-1
position: 4650542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650653:-1
position: 4650653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4650253-4650392:-1:exon

position:4650253:-1
position: 4650253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650392:-1
position: 4650392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4648389-4648430:-1:exon

position:4648389:-1
position: 4648389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4648430:-1
position: 4648430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4646717-4646817:-1:exon

position:4646717:-1
position: 4646717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646817:-1
position: 4646817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4642929-4643106:-1:exon

position:4642929:-1
position: 4642929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643106:-1
position: 4643106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4640776-4640883:-1:exon

position:4640776:-1
position: 4640776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640883:-1
position: 4640883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4639763-4639915:-1:exon

position:4639763:-1
position: 4639763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4639915:-1
position: 4639915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4634567-4634660:-1:exon

position:4634567:-1
position: 4634567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4634660:-1
position: 4634660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4634230-4634387:-1:exon

position:4634387:-1
position: 4634387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTHFD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTHFD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-1-tetrahydrofolate synthase, cytoplasmic
translation: MAPAEVLSGKAVSAQIREKLKRQVAQMREQVPNFRPGLAILQVGNREDSHLYINMKLKAAEEIGIKATHIKLSDTATETEVLRCVTSLNEDPSVHGLVVQLPLDSEKTINVEAVTNAVAPEKDIDGLTSINAGKLARGDLGDCFIPCTPKGCLELIRETGVQIAGRHAVVIGRSKIVGAPMHDLLLWNNATVTTCHSKTAKLAEEISKADILVVATGKPEMVKGEWIKPSAVVIDCGINYVPDNSKPNGKRVVGDVAYAEAKERASYITPVPGGVGPMTVAMLMQSTIESARRFLDKFKPGKWNIQYNQLRILNPVPSDIEISRSCIPKPIGHLAREIGLLSEEVELYGQTKAKILLSAIERLKDQPDGKYVVVTGITPTPLGEGKSTTTIGLVQALGAHLQRNAFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLVAAAIDARMFHEMTQTDKALFNRLVPSVGGARKFSEIQIRRLQRLGIEKNNPGTLTEEEINRFVRLDIDPETITWQRVLDTNDRFLRKITIGQSPTEKGFTRTTQFDISVASEIMAVLALTNSLEDMRTRLGKMVVASSKKGDPISTEDLGVSGALTVLMKDAIKPNLMQTLEGTPVFVHAGPFANIAHGNSSILADKVALKLVGPEGFVVTEAGFGADIGMEKFFNIKCRYSGLRPHVVVLVATVRALKMHGGGPTVAAGVPLPKEYTEENLDLLEKGFKNLGKQIQNAWQFGVPVVVAVNAFKTDTEAELELVRSLSKEAGAFDAVKCTHWAEGGKGAVALAQAVERASRSPSDFRLLYDVELPVVEKIRIIAQKIYGANDIELLPEAQRKVEVYTKQGFGNLPICMAKTHLSLSHDPEKKGVPTDFVLPIRDIRASVGAGFLYPLVGTMSTMPGLPTRPCFYDIDLDPVSEQVSGLF
SIO_010081: MTHFD1
subclass of: SO_0000673
so part of: MTHFD1
location: complement(join(4634571..4634660,4639763..4639915,4640776..4640883,4642929..4643106,4646717..4646817,4648389..4648430,4650253..4650392,4650542..4650653,4650902..4650970,4653055..4653195,4653885..4653961,4657755..4657857,4658268..4658342,4659668..4659775,4660415..4660461,4663636..4663772,4666394..4666567,4667609..4667706,4669230..4669357,4672710..4672821,4674751..4674887,4682608..4682708,4685380..4685516,4689864..4689917,4692062..4692121,4694300..4694384,4714861..4714901))
location: region:4634571-4714901:-1
so has part: feature:4714861-4714901:-1:exon
so has part: feature:4694300-4694384:-1:exon
so has part: feature:4692062-4692121:-1:exon
so has part: feature:4689864-4689917:-1:exon
so has part: feature:4685380-4685516:-1:exon
so has part: feature:4682608-4682708:-1:exon
so has part: feature:4674751-4674887:-1:exon
so has part: feature:4672710-4672821:-1:exon
so has part: feature:4669230-4669357:-1:exon
so has part: feature:4667609-4667706:-1:exon
so has part: feature:4666394-4666567:-1:exon
so has part: feature:4663636-4663772:-1:exon
so has part: feature:4660415-4660461:-1:exon
so has part: feature:4659668-4659775:-1:exon
so has part: feature:4658268-4658342:-1:exon
so has part: feature:4657755-4657857:-1:exon
so has part: feature:4653885-4653961:-1:exon
so has part: feature:4653055-4653195:-1:exon
so has part: feature:4650902-4650970:-1:exon
so has part: feature:4650542-4650653:-1:exon
so has part: feature:4650253-4650392:-1:exon
so has part: feature:4648389-4648430:-1:exon
so has part: feature:4646717-4646817:-1:exon
so has part: feature:4642929-4643106:-1:exon
so has part: feature:4640776-4640883:-1:exon
so has part: feature:4639763-4639915:-1:exon
so has part: feature:4634571-4634660:-1:exon

XP_038621403.1
type: Protein
SIO_000068: ncbiprotein

position:4634571:-1
position: 4634571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4714901:-1
position: 4714901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4714861-4714901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4694300-4694384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4692062-4692121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4689864-4689917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685380-4685516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4682608-4682708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4674751-4674887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4672710-4672821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4669230-4669357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667609-4667706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4666394-4666567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663636-4663772:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4660415-4660461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4659668-4659775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4658268-4658342:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4657755-4657857:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4653885-4653961:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4653055-4653195:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4650902-4650970:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4650542-4650653:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4650253-4650392:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4648389-4648430:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4646717-4646817:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4642929-4643106:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4640776-4640883:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4639763-4639915:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4634571-4634660:-1:exon

TMEM229B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TMEM229B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4752230..4816863
location: region:4752230-4816863:1
so has part: feature:4752230-4816863:1:exon
subclass of: SO_0000010

119944787
type: Gene
SIO_000068: ncbigene

position:4752230:1
position: 4752230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4816863:1
position: 4816863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4752230-4816863:1:exon

TMEM229B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TMEM229B
product: transmembrane protein 229B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038765932.1
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: join(4752230..4752373,4804873..4805077,4806393..4806457,4816254..4816863)
location: region:4752230-4816863:1
so has part: feature:4752230-4752373:1:exon
so has part: feature:4804873-4805077:1:exon
so has part: feature:4806393-4806457:1:exon
so has part: feature:4816254-4816863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4752230-4752373:1:exon

position:4752373:1
position: 4752373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4804873-4805077:1:exon

position:4804873:1
position: 4804873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4805077:1
position: 4805077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4806393-4806457:1:exon

position:4806393:1
position: 4806393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4806457:1
position: 4806457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4816254-4816863:1:exon

position:4816254:1
position: 4816254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM229B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TMEM229B
product: transmembrane protein 229B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765933.1
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: join(4752230..4752373,4804873..4805077,4806399..4806457,4816254..4816863)
location: region:4752230-4816863:1
so has part: feature:4752230-4752373:1:exon
so has part: feature:4804873-4805077:1:exon
so has part: feature:4806399-4806457:1:exon
so has part: feature:4816254-4816863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4752230-4752373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4804873-4805077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4806399-4806457:1:exon

position:4806399:1
position: 4806399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4816254-4816863:1:exon

TMEM229B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TMEM229B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 229B isoform X1
translation: MPTRRREDGSGPRHCARKEAGLGLFWTSSLMSELRRASTGVTSAVDFISSRGPTDVRRDPTPAQGPGRGPGVGMASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNCNWKFPGVTSVWALFIYGTSILIVEKMYLRLRSRCPLLVRCLIYTLWTYLWEFTTGYILRQFNACPWDYSQFDFDFMGLITLEYAVPWFCGALIMERFIIRNTLRLRFDQRAEPGGPGAPLALANGHVKTD
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: join(4804951..4805077,4806393..4806457,4816254..4816784)
location: region:4804951-4816784:1
so has part: feature:4804951-4805077:1:exon
so has part: feature:4806393-4806457:1:exon
so has part: feature:4816254-4816784:1:exon

XP_038621860.1
type: Protein
SIO_000068: ncbiprotein

position:4804951:1
position: 4804951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4816784:1
position: 4816784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4804951-4805077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4806393-4806457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4816254-4816784:1:exon

TMEM229B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TMEM229B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 229B isoform X2
translation: MPTRRREDGSGPRHCARKEAGLGLFWTSSLMSELRRASTGVTMDFISSRGPTDVRRDPTPAQGPGRGPGVGMASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNCNWKFPGVTSVWALFIYGTSILIVEKMYLRLRSRCPLLVRCLIYTLWTYLWEFTTGYILRQFNACPWDYSQFDFDFMGLITLEYAVPWFCGALIMERFIIRNTLRLRFDQRAEPGGPGAPLALANGHVKTD
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: join(4804951..4805077,4806399..4806457,4816254..4816784)
location: region:4804951-4816784:1
so has part: feature:4804951-4805077:1:exon
so has part: feature:4806399-4806457:1:exon
so has part: feature:4816254-4816784:1:exon

XP_038621861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4804951-4805077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4806399-4806457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4816254-4816784:1:exon

TMEM229B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TMEM229B
product: transmembrane protein 229B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765934.1
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: join(4805000..4805077,4816254..4816863)
location: region:4805000-4816863:1
so has part: feature:4805000-4805077:1:exon
so has part: feature:4816254-4816863:1:exon

position:4805000:1
position: 4805000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4805000-4805077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4816254-4816863:1:exon

TMEM229B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TMEM229B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 229B isoform X3
translation: MASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNCNWKFPGVTSVWALFIYGTSILIVEKMYLRLRSRCPLLVRCLIYTLWTYLWEFTTGYILRQFNACPWDYSQFDFDFMGLITLEYAVPWFCGALIMERFIIRNTLRLRFDQRAEPGGPGAPLALANGHVKTD
SIO_010081: TMEM229B
subclass of: SO_0000673
so part of: TMEM229B
location: 4816281..4816784
location: region:4816281-4816784:1
so has part: feature:4816281-4816784:1:exon

XP_038621862.1
type: Protein
SIO_000068: ncbiprotein

position:4816281:1
position: 4816281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4816281-4816784:1:exon

PLEK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PLEK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4875390..4911628
location: region:4875390-4911628:1
so has part: feature:4875390-4911628:1:exon
subclass of: SO_0000010

119944786
type: Gene
SIO_000068: ncbigene

position:4875390:1
position: 4875390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4911628:1
position: 4911628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4875390-4911628:1:exon

PLEK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PLEK2
product: pleckstrin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765930.1
SIO_010081: PLEK2
subclass of: SO_0000673
so part of: PLEK2
location: join(4875390..4875484,4888557..4888721,4890979..4891160,4892777..4892868,4896783..4896970,4898930..4899034,4902321..4902404,4905877..4905955,4911104..4911628)
location: region:4875390-4911628:1
so has part: feature:4875390-4875484:1:exon
so has part: feature:4888557-4888721:1:exon
so has part: feature:4890979-4891160:1:exon
so has part: feature:4892777-4892868:1:exon
so has part: feature:4896783-4896970:1:exon
so has part: feature:4898930-4899034:1:exon
so has part: feature:4902321-4902404:1:exon
so has part: feature:4905877-4905955:1:exon
so has part: feature:4911104-4911628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4875390-4875484:1:exon

position:4875484:1
position: 4875484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4888557-4888721:1:exon

position:4888557:1
position: 4888557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4888721:1
position: 4888721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4890979-4891160:1:exon

position:4890979:1
position: 4890979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891160:1
position: 4891160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4892777-4892868:1:exon

position:4892777:1
position: 4892777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4892868:1
position: 4892868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4896783-4896970:1:exon

position:4896783:1
position: 4896783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4896970:1
position: 4896970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4898930-4899034:1:exon

position:4898930:1
position: 4898930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4899034:1
position: 4899034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4902321-4902404:1:exon

position:4902321:1
position: 4902321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4902404:1
position: 4902404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4905877-4905955:1:exon

position:4905877:1
position: 4905877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4905955:1
position: 4905955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4911104-4911628:1:exon

position:4911104:1
position: 4911104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PLEK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin-2
translation: MEGEGGVLKEGFLVKRGHLVHNWKVRWFVLKQNSLLYYKLEGGRKEVLLKGQILLDGCTITCPCLDYENRPLVIKLRTKTSTDYFLEACSREERDAWAFEITGAIHAGQPGKIRQLHVLKNSFKLPANISLNLIAKQMHDGNSRIRPAPNMEQGSTYKKTFTGSALVDWLISGQFVASRLEAVTLASMLMSENFVQPVGARSSEAVRSGDLADQFLDDSTALYTFAESYKKKMISPKEDVDLNTVELSGTIIKQGYLAKQGHKRKNWKVRRFVLRSEPAFLHYYNPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKNDVHYYIQASSKAERTEWIEAIKRLT
SIO_010081: PLEK2
subclass of: SO_0000673
so part of: PLEK2
location: join(4875437..4875484,4888557..4888721,4890979..4891160,4892777..4892868,4896783..4896970,4898930..4899034,4902321..4902404,4905877..4905955,4911104..4911231)
location: region:4875437-4911231:1
so has part: feature:4875437-4875484:1:exon
so has part: feature:4888557-4888721:1:exon
so has part: feature:4890979-4891160:1:exon
so has part: feature:4892777-4892868:1:exon
so has part: feature:4896783-4896970:1:exon
so has part: feature:4898930-4899034:1:exon
so has part: feature:4902321-4902404:1:exon
so has part: feature:4905877-4905955:1:exon
so has part: feature:4911104-4911231:1:exon

XP_038621858.1
type: Protein
SIO_000068: ncbiprotein

position:4875437:1
position: 4875437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4911231:1
position: 4911231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4875437-4875484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4888557-4888721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4890979-4891160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4892777-4892868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4896783-4896970:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4898930-4899034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4902321-4902404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4905877-4905955:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4911104-4911231:1:exon

EIF2S1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EIF2S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4917299..4935769)
location: region:4917299-4935769:-1
so has part: feature:4917299-4935769:-1:exon
subclass of: SO_0000010

119944715
type: Gene
SIO_000068: ncbigene

position:4917299:-1
position: 4917299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4935769:-1
position: 4935769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4917299-4935769:-1:exon

EIF2S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EIF2S1
product: eukaryotic translation initiation factor 2 subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038765811.1
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917299..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924245,4925988..4926136,4935673..4935769))
location: region:4917299-4935769:-1
so has part: feature:4935673-4935769:-1:exon
so has part: feature:4925988-4926136:-1:exon
so has part: feature:4924004-4924245:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917299-4917852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4935673-4935769:-1:exon

position:4935673:-1
position: 4935673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4925988-4926136:-1:exon

position:4925988:-1
position: 4925988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4926136:-1
position: 4926136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4924004-4924245:-1:exon

position:4924004:-1
position: 4924004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4924245:-1
position: 4924245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4922621-4922700:-1:exon

position:4922621:-1
position: 4922621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4922700:-1
position: 4922700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4920916-4921067:-1:exon

position:4920916:-1
position: 4920916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4921067:-1
position: 4921067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4920294-4920400:-1:exon

position:4920294:-1
position: 4920294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4920400:-1
position: 4920400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4919413-4919510:-1:exon

position:4919413:-1
position: 4919413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4919510:-1
position: 4919510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4918446-4918589:-1:exon

position:4918446:-1
position: 4918446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4918589:-1
position: 4918589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4917299-4917852:-1:exon

position:4917852:-1
position: 4917852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF2S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EIF2S1
product: eukaryotic translation initiation factor 2 subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038765809.1
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917299..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924251,4925988..4926136,4935673..4935769))
location: region:4917299-4935769:-1
so has part: feature:4935673-4935769:-1:exon
so has part: feature:4925988-4926136:-1:exon
so has part: feature:4924004-4924251:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917299-4917852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4935673-4935769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4925988-4926136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4924004-4924251:-1:exon

position:4924251:-1
position: 4924251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4917299-4917852:-1:exon

EIF2S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EIF2S1
product: eukaryotic translation initiation factor 2 subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765810.1
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917299..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924251,4925988..4926136,4934572..4934636))
location: region:4917299-4934636:-1
so has part: feature:4934572-4934636:-1:exon
so has part: feature:4925988-4926136:-1:exon
so has part: feature:4924004-4924251:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917299-4917852:-1:exon

position:4934636:-1
position: 4934636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4934572-4934636:-1:exon

position:4934572:-1
position: 4934572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4925988-4926136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4924004-4924251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4917299-4917852:-1:exon

EIF2S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EIF2S1
product: eukaryotic translation initiation factor 2 subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038765812.1
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917299..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924251,4925350..4925459))
location: region:4917299-4925459:-1
so has part: feature:4925350-4925459:-1:exon
so has part: feature:4924004-4924251:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917299-4917852:-1:exon

position:4925459:-1
position: 4925459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4925350-4925459:-1:exon

position:4925350:-1
position: 4925350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4924004-4924251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4917299-4917852:-1:exon

EIF2S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EIF2S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 1
translation: MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKKPGYGAYDAFKLAVSDPSILDGLDLNEDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMTVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKAED
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917727..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924244))
location: region:4917727-4924244:-1
so has part: feature:4924004-4924244:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917727-4917852:-1:exon

XP_038621737.1
type: Protein
SIO_000068: ncbiprotein

position:4917727:-1
position: 4917727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4924244:-1
position: 4924244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4924004-4924244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4917727-4917852:-1:exon

EIF2S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EIF2S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 1
translation: MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKKPGYGAYDAFKLAVSDPSILDGLDLNEDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMTVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKAED
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917727..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924244))
location: region:4917727-4924244:-1
so has part: feature:4924004-4924244:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917727-4917852:-1:exon

XP_038621738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4924004-4924244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4917727-4917852:-1:exon

EIF2S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EIF2S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 1
translation: MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKKPGYGAYDAFKLAVSDPSILDGLDLNEDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMTVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKAED
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917727..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924244))
location: region:4917727-4924244:-1
so has part: feature:4924004-4924244:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917727-4917852:-1:exon

XP_038621739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4924004-4924244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4917727-4917852:-1:exon

EIF2S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EIF2S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 1
translation: MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKKPGYGAYDAFKLAVSDPSILDGLDLNEDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMTVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKAED
SIO_010081: EIF2S1
subclass of: SO_0000673
so part of: EIF2S1
location: complement(join(4917727..4917852,4918446..4918589,4919413..4919510,4920294..4920400,4920916..4921067,4922621..4922700,4924004..4924244))
location: region:4917727-4924244:-1
so has part: feature:4924004-4924244:-1:exon
so has part: feature:4922621-4922700:-1:exon
so has part: feature:4920916-4921067:-1:exon
so has part: feature:4920294-4920400:-1:exon
so has part: feature:4919413-4919510:-1:exon
so has part: feature:4918446-4918589:-1:exon
so has part: feature:4917727-4917852:-1:exon

XP_038621740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4924004-4924244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4922621-4922700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4920916-4921067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920294-4920400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4919413-4919510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4918446-4918589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4917727-4917852:-1:exon

MPP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MPP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4943417..5092489)
location: region:4943417-5092489:-1
so has part: feature:4943417-5092489:-1:exon
subclass of: SO_0000010

119944491
type: Gene
SIO_000068: ncbigene

position:4943417:-1
position: 4943417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5092489:-1
position: 5092489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4943417-5092489:-1:exon

MPP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MPP5
product: membrane palmitoylated protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765434.1
SIO_010081: MPP5
subclass of: SO_0000673
so part of: MPP5
location: complement(join(4943417..4943481,4943713..4943810,4944668..4944684,4945379..4945489,4947947..4948149,4949512..4949679,4952803..4952874,4953227..4953298,4964156..4964339,4975126..4975203,4978690..4978851,4994629..4994775,5000511..5000588,5026489..5026697,5041973..5042487,5052346..5052428,5092412..5092489))
location: region:4943417-5092489:-1
so has part: feature:5092412-5092489:-1:exon
so has part: feature:5052346-5052428:-1:exon
so has part: feature:5041973-5042487:-1:exon
so has part: feature:5026489-5026697:-1:exon
so has part: feature:5000511-5000588:-1:exon
so has part: feature:4994629-4994775:-1:exon
so has part: feature:4978690-4978851:-1:exon
so has part: feature:4975126-4975203:-1:exon
so has part: feature:4964156-4964339:-1:exon
so has part: feature:4953227-4953298:-1:exon
so has part: feature:4952803-4952874:-1:exon
so has part: feature:4949512-4949679:-1:exon
so has part: feature:4947947-4948149:-1:exon
so has part: feature:4945379-4945489:-1:exon
so has part: feature:4944668-4944684:-1:exon
so has part: feature:4943713-4943810:-1:exon
so has part: feature:4943417-4943481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5092412-5092489:-1:exon

position:5092412:-1
position: 5092412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5052346-5052428:-1:exon

position:5052346:-1
position: 5052346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5052428:-1
position: 5052428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5041973-5042487:-1:exon

position:5041973:-1
position: 5041973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042487:-1
position: 5042487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5026489-5026697:-1:exon

position:5026489:-1
position: 5026489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5026697:-1
position: 5026697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5000511-5000588:-1:exon

position:5000511:-1
position: 5000511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5000588:-1
position: 5000588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4994629-4994775:-1:exon

position:4994629:-1
position: 4994629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4994775:-1
position: 4994775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4978690-4978851:-1:exon

position:4978690:-1
position: 4978690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4978851:-1
position: 4978851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4975126-4975203:-1:exon

position:4975126:-1
position: 4975126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4975203:-1
position: 4975203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4964156-4964339:-1:exon

position:4964156:-1
position: 4964156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4964339:-1
position: 4964339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4953227-4953298:-1:exon

position:4953227:-1
position: 4953227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4953298:-1
position: 4953298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4952803-4952874:-1:exon

position:4952803:-1
position: 4952803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4952874:-1
position: 4952874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4949512-4949679:-1:exon

position:4949512:-1
position: 4949512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4949679:-1
position: 4949679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4947947-4948149:-1:exon

position:4947947:-1
position: 4947947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4948149:-1
position: 4948149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4945379-4945489:-1:exon

position:4945379:-1
position: 4945379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4945489:-1
position: 4945489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4944668-4944684:-1:exon

position:4944668:-1
position: 4944668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944684:-1
position: 4944684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4943713-4943810:-1:exon

position:4943713:-1
position: 4943713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4943810:-1
position: 4943810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4943417-4943481:-1:exon

position:4943481:-1
position: 4943481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MPP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 5
translation: MTTSHMNGHVAEDSDSEVKNADLASPEEPPKHREMAVDCPGDLGSRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKIGIDNPIFDTEEGVILESPHCAVKVLEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNTDFLNAFKIHNAVTVHMNKASPPFPLLANAKELAQEVQTVLKPSHQKEGQELNSLLNAPHIQALLLAHDKVAEQEMQPESLTEERVYESVGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQHNKSPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKNFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNNETDRFASAVPHTTRTRRDNEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSVDSVRQVINSGKICLLTLHTQSLKSLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKFMDESRSLQFRGGHEKAYGSKKRREKSGYIQEEVFQQLESQNAPTDNDLTFYYLGLSRC
SIO_010081: MPP5
subclass of: SO_0000673
so part of: MPP5
location: complement(join(4943417..4943481,4943713..4943810,4944668..4944684,4945379..4945489,4947947..4948149,4949512..4949679,4952803..4952874,4953227..4953298,4964156..4964339,4975126..4975203,4978690..4978851,4994629..4994775,5000511..5000588,5026489..5026697,5041973..5042339))
location: region:4943417-5042339:-1
so has part: feature:5041973-5042339:-1:exon
so has part: feature:5026489-5026697:-1:exon
so has part: feature:5000511-5000588:-1:exon
so has part: feature:4994629-4994775:-1:exon
so has part: feature:4978690-4978851:-1:exon
so has part: feature:4975126-4975203:-1:exon
so has part: feature:4964156-4964339:-1:exon
so has part: feature:4953227-4953298:-1:exon
so has part: feature:4952803-4952874:-1:exon
so has part: feature:4949512-4949679:-1:exon
so has part: feature:4947947-4948149:-1:exon
so has part: feature:4945379-4945489:-1:exon
so has part: feature:4944668-4944684:-1:exon
so has part: feature:4943713-4943810:-1:exon
so has part: feature:4943417-4943481:-1:exon

XP_038621362.1
type: Protein
SIO_000068: ncbiprotein

position:5042339:-1
position: 5042339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5041973-5042339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5026489-5026697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5000511-5000588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4994629-4994775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4978690-4978851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4975126-4975203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4964156-4964339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4953227-4953298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4952803-4952874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4949512-4949679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4947947-4948149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4945379-4945489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4944668-4944684:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4943713-4943810:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4943417-4943481:-1:exon

LOC119944942
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944942
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5067508..5067645
location: region:5067508-5067645:1
so has part: feature:5067508-5067645:1:exon
subclass of: SO_0000578

119944942
type: Gene
SIO_000068: ncbigene

position:5067508:1
position: 5067508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5067645:1
position: 5067645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5067508-5067645:1:exon

LOC119944942
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944942
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456081.1
SIO_010081: LOC119944942
subclass of: SO_0000673
so part of: LOC119944942
location: 5067508..5067645
location: region:5067508-5067645:1
so has part: feature:5067508-5067645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5067508-5067645:1:exon

FAM71D
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FAM71D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5131080..5174711)
location: region:5131080-5174711:-1
so has part: feature:5131080-5174711:-1:exon
subclass of: SO_0000010

119944768
type: Gene
SIO_000068: ncbigene

position:5131080:-1
position: 5131080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5174711:-1
position: 5174711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5131080-5174711:-1:exon

FAM71D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FAM71D
product: family with sequence similarity 71 member D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765908.1
SIO_010081: FAM71D
subclass of: SO_0000673
so part of: FAM71D
location: complement(join(5131080..5131204,5132805..5132833,5136885..5137162,5144847..5145096,5147828..5148027,5156163..5156339,5174657..5174711))
location: region:5131080-5174711:-1
so has part: feature:5174657-5174711:-1:exon
so has part: feature:5156163-5156339:-1:exon
so has part: feature:5147828-5148027:-1:exon
so has part: feature:5144847-5145096:-1:exon
so has part: feature:5136885-5137162:-1:exon
so has part: feature:5132805-5132833:-1:exon
so has part: feature:5131080-5131204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5174657-5174711:-1:exon

position:5174657:-1
position: 5174657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5156163-5156339:-1:exon

position:5156163:-1
position: 5156163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5156339:-1
position: 5156339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5147828-5148027:-1:exon

position:5147828:-1
position: 5147828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5148027:-1
position: 5148027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5144847-5145096:-1:exon

position:5144847:-1
position: 5144847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5145096:-1
position: 5145096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5136885-5137162:-1:exon

position:5136885:-1
position: 5136885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5137162:-1
position: 5137162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5132805-5132833:-1:exon

position:5132805:-1
position: 5132805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5132833:-1
position: 5132833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5131080-5131204:-1:exon

position:5131204:-1
position: 5131204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM71D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FAM71D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM71D
translation: MKKTGPALWKAITNSRERNSVMGELQCVLNGGEYTPFTSTPMLESNFIQVSKKGESVYLHNRANWVTVGICASSPTLPLPNVMLLAHLMPTSPKEAQPKLWSFSRPTSQYKLVLTRFIPLQFATISVYDARKLCLKIKLVSGRSYYLQLCAPSSKQDVIFRQWVQLTYLLQPPTKYRGDTERTAPREDADLARASGDGEEESQAKNGNNRHREEPRRERDTRKPSVTVVPVEECYNYIEIGTDGFKTPEQGTTGAELIKGDYDREKKSHETTEMEGEAKEEAEEEITRKESRNSRSDSGAAGLYSFSVFPLISISFPMFTI
SIO_010081: FAM71D
subclass of: SO_0000673
so part of: FAM71D
location: complement(join(5131143..5131204,5132805..5132833,5136885..5137162,5144847..5145096,5147828..5148027,5156163..5156309))
location: region:5131143-5156309:-1
so has part: feature:5156163-5156309:-1:exon
so has part: feature:5147828-5148027:-1:exon
so has part: feature:5144847-5145096:-1:exon
so has part: feature:5136885-5137162:-1:exon
so has part: feature:5132805-5132833:-1:exon
so has part: feature:5131143-5131204:-1:exon

XP_038621836.1
type: Protein
SIO_000068: ncbiprotein

position:5131143:-1
position: 5131143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5156309:-1
position: 5156309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5156163-5156309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5147828-5148027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5144847-5145096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5136885-5137162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5132805-5132833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5131143-5131204:-1:exon

LOC119944984
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944984
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5190375..5190512)
location: region:5190375-5190512:-1
so has part: feature:5190375-5190512:-1:exon
subclass of: SO_0000578

119944984
type: Gene
SIO_000068: ncbigene

position:5190375:-1
position: 5190375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5190512:-1
position: 5190512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190375-5190512:-1:exon

LOC119944984
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944984
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456120.1
SIO_010081: LOC119944984
subclass of: SO_0000673
so part of: LOC119944984
location: complement(5190375..5190512)
location: region:5190375-5190512:-1
so has part: feature:5190375-5190512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5190375-5190512:-1:exon

GPHN
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5190903..5911036)
location: region:5190903-5911036:-1
so has part: feature:5190903-5911036:-1:exon
subclass of: SO_0000010

119944608
type: Gene
SIO_000068: ncbigene

position:5190903:-1
position: 5190903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911036:-1
position: 5911036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190903-5911036:-1:exon

GPHN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPHN
product: gephyrin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765627.1
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5190903..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5338522..5338584,5390972..5391028,5414320..5414454,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5911036))
location: region:5190903-5911036:-1
so has part: feature:5910911-5911036:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5390972-5391028:-1:exon
so has part: feature:5338522-5338584:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5190903-5191890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5911036:-1:exon

position:5910911:-1
position: 5910911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

position:5689394:-1
position: 5689394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5689472:-1
position: 5689472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

position:5577288:-1
position: 5577288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5577345:-1
position: 5577345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

position:5522238:-1
position: 5522238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5522330:-1
position: 5522330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

position:5476249:-1
position: 5476249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5476343:-1
position: 5476343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

position:5453269:-1
position: 5453269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5453335:-1
position: 5453335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

position:5443167:-1
position: 5443167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5443439:-1
position: 5443439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5414320-5414454:-1:exon

position:5414320:-1
position: 5414320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414454:-1
position: 5414454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5390972-5391028:-1:exon

position:5390972:-1
position: 5390972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5391028:-1
position: 5391028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5338522-5338584:-1:exon

position:5338522:-1
position: 5338522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338584:-1
position: 5338584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5336662-5336704:-1:exon

position:5336662:-1
position: 5336662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336704:-1
position: 5336704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5322937-5323074:-1:exon

position:5322937:-1
position: 5322937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5323074:-1
position: 5323074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5291234-5291326:-1:exon

position:5291234:-1
position: 5291234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5291326:-1
position: 5291326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5277959-5278014:-1:exon

position:5277959:-1
position: 5277959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5278014:-1
position: 5278014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5274677-5274796:-1:exon

position:5274677:-1
position: 5274677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5274796:-1
position: 5274796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5272088-5272146:-1:exon

position:5272088:-1
position: 5272088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5272146:-1
position: 5272146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5269784-5269937:-1:exon

position:5269784:-1
position: 5269784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5269937:-1
position: 5269937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5259502-5259623:-1:exon

position:5259502:-1
position: 5259502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5259623:-1
position: 5259623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5226679-5226766:-1:exon

position:5226679:-1
position: 5226679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5226766:-1
position: 5226766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5215239-5215312:-1:exon

position:5215239:-1
position: 5215239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5215312:-1
position: 5215312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5210575-5210639:-1:exon

position:5210575:-1
position: 5210575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5210639:-1
position: 5210639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5200770-5200873:-1:exon

position:5200770:-1
position: 5200770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5200873:-1
position: 5200873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5193770-5193866:-1:exon

position:5193770:-1
position: 5193770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5193866:-1
position: 5193866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5190903-5191890:-1:exon

position:5191890:-1
position: 5191890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPHN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPHN
product: gephyrin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038765623.1
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5190904..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5414320..5414454,5440891..5440998,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5911036))
location: region:5190904-5911036:-1
so has part: feature:5910911-5911036:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5440891-5440998:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5190904-5191890:-1:exon

position:5190904:-1
position: 5190904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5911036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5440891-5440998:-1:exon

position:5440891:-1
position: 5440891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5440998:-1
position: 5440998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5414320-5414454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5190904-5191890:-1:exon

GPHN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPHN
product: gephyrin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038765626.1
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5911036))
location: region:5191757-5911036:-1
so has part: feature:5910911-5911036:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

position:5191757:-1
position: 5191757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5911036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPHN
product: gephyrin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038765624.1
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5414320..5414454,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5911036))
location: region:5191757-5911036:-1
so has part: feature:5910911-5911036:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5911036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5414320-5414454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPHN
product: gephyrin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765625.1
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5440891..5440998,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5911036))
location: region:5191757-5911036:-1
so has part: feature:5910911-5911036:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5440891-5440998:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5911036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5440891-5440998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X4
translation: MAATEGLLLTNHDHQIRVGVLTVSDSCFRNLAEDRSGLNLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQVRPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5910977))
location: region:5191757-5910977:-1
so has part: feature:5910911-5910977:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

XP_038621554.1
type: Protein
SIO_000068: ncbiprotein

position:5910977:-1
position: 5910977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5910977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X2
translation: MAATEGLLLTNHDHQIRVGVLTVSDSCFRNLAEDRSGLNLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQVRPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5414320..5414454,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5910977))
location: region:5191757-5910977:-1
so has part: feature:5910911-5910977:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

XP_038621552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5910977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5414320-5414454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X5
translation: MAATEGLLLTNHDHQIRVGVLTVSDSCFRNLAEDRSGLNLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKQIRRPDESKGVASRVGSLKLHFRLEGLKDELGRIRGYDLRVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQVRPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5338522..5338584,5390972..5391028,5414320..5414454,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5910977))
location: region:5191757-5910977:-1
so has part: feature:5910911-5910977:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5390972-5391028:-1:exon
so has part: feature:5338522-5338584:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

XP_038621555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5910977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5414320-5414454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5390972-5391028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5338522-5338584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X3
translation: MAATEGLLLTNHDHQIRVGVLTVSDSCFRNLAEDRSGLNLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPSYSSTAVIMAYGASPIPGLISYSHHATDSAGGRVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQVRPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5440891..5440998,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5910977))
location: region:5191757-5910977:-1
so has part: feature:5910911-5910977:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5440891-5440998:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

XP_038621553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5910977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5440891-5440998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5191757-5191890:-1:exon

GPHN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPHN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gephyrin isoform X1
translation: MAATEGLLLTNHDHQIRVGVLTVSDSCFRNLAEDRSGLNLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPSYSSTAVIMAYGASPIPGLISYSHHATDSAGGRIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQVRPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
SIO_010081: GPHN
subclass of: SO_0000673
so part of: GPHN
location: complement(join(5191757..5191890,5193770..5193866,5200770..5200873,5210575..5210639,5215239..5215312,5226679..5226766,5259502..5259623,5269784..5269937,5272088..5272146,5274677..5274796,5277959..5278014,5291234..5291326,5322937..5323074,5336662..5336704,5414320..5414454,5440891..5440998,5443167..5443439,5453269..5453335,5476249..5476343,5522238..5522330,5577288..5577345,5689394..5689472,5910911..5910977))
location: region:5191757-5910977:-1
so has part: feature:5910911-5910977:-1:exon
so has part: feature:5689394-5689472:-1:exon
so has part: feature:5577288-5577345:-1:exon
so has part: feature:5522238-5522330:-1:exon
so has part: feature:5476249-5476343:-1:exon
so has part: feature:5453269-5453335:-1:exon
so has part: feature:5443167-5443439:-1:exon
so has part: feature:5440891-5440998:-1:exon
so has part: feature:5414320-5414454:-1:exon
so has part: feature:5336662-5336704:-1:exon
so has part: feature:5322937-5323074:-1:exon
so has part: feature:5291234-5291326:-1:exon
so has part: feature:5277959-5278014:-1:exon
so has part: feature:5274677-5274796:-1:exon
so has part: feature:5272088-5272146:-1:exon
so has part: feature:5269784-5269937:-1:exon
so has part: feature:5259502-5259623:-1:exon
so has part: feature:5226679-5226766:-1:exon
so has part: feature:5215239-5215312:-1:exon
so has part: feature:5210575-5210639:-1:exon
so has part: feature:5200770-5200873:-1:exon
so has part: feature:5193770-5193866:-1:exon
so has part: feature:5191757-5191890:-1:exon

XP_038621551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5910911-5910977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5689394-5689472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5577288-5577345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5522238-5522330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5476249-5476343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5453269-5453335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5443167-5443439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5440891-5440998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5414320-5414454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5336662-5336704:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5322937-5323074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5291234-5291326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277959-5278014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5274677-5274796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5272088-5272146:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5269784-5269937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5259502-5259623:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5226679-5226766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5215239-5215312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5210575-5210639:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5200770-5200873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5193770-5193866:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5191757-5191890:-1:exon

LOC119944946
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944946
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5258857..5258994
location: region:5258857-5258994:1
so has part: feature:5258857-5258994:1:exon
subclass of: SO_0000578

119944946
type: Gene
SIO_000068: ncbigene

position:5258857:1
position: 5258857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5258994:1
position: 5258994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5258857-5258994:1:exon

LOC119944946
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944946
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456085.1
SIO_010081: LOC119944946
subclass of: SO_0000673
so part of: LOC119944946
location: 5258857..5258994
location: region:5258857-5258994:1
so has part: feature:5258857-5258994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5258857-5258994:1:exon

LOC119944841
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944841
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5261559..5261696)
location: region:5261559-5261696:-1
so has part: feature:5261559-5261696:-1:exon
subclass of: SO_0000578

119944841
type: Gene
SIO_000068: ncbigene

position:5261559:-1
position: 5261559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261696:-1
position: 5261696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5261559-5261696:-1:exon

LOC119944841
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944841
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455989.1
SIO_010081: LOC119944841
subclass of: SO_0000673
so part of: LOC119944841
location: complement(5261559..5261696)
location: region:5261559-5261696:-1
so has part: feature:5261559-5261696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5261559-5261696:-1:exon

LOC119944857
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944857
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5417359..5417496
location: region:5417359-5417496:1
so has part: feature:5417359-5417496:1:exon
subclass of: SO_0000578

119944857
type: Gene
SIO_000068: ncbigene

position:5417359:1
position: 5417359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5417496:1
position: 5417496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5417359-5417496:1:exon

LOC119944857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944857
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456003.1
SIO_010081: LOC119944857
subclass of: SO_0000673
so part of: LOC119944857
location: 5417359..5417496
location: region:5417359-5417496:1
so has part: feature:5417359-5417496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5417359-5417496:1:exon

LOC119944994
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944994
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5560268..5560405
location: region:5560268-5560405:1
so has part: feature:5560268-5560405:1:exon
subclass of: SO_0000578

119944994
type: Gene
SIO_000068: ncbigene

position:5560268:1
position: 5560268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5560405:1
position: 5560405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5560268-5560405:1:exon

LOC119944994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944994
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456130.1
SIO_010081: LOC119944994
subclass of: SO_0000673
so part of: LOC119944994
location: 5560268..5560405
location: region:5560268-5560405:1
so has part: feature:5560268-5560405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5560268-5560405:1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5690849..5690941)
location: region:5690849-5690941:-1
so has part: feature:5690849-5690941:-1:exon
subclass of: SO_0000663

119945011
type: Gene
SIO_000068: ncbigene

position:5690849:-1
position: 5690849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5690941:-1
position: 5690941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5690849-5690941:-1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9261
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5690906..5690908),aa:Tyr, seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: complement(join(5690849..5690884,5690905..5690941))
location: region:5690849-5690941:-1
so has part: feature:5690905-5690941:-1:exon
so has part: feature:5690849-5690884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5690905-5690941:-1:exon

position:5690905:-1
position: 5690905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5690849-5690884:-1:exon

position:5690884:-1
position: 5690884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC196
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CCDC196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5957412..5969629)
location: region:5957412-5969629:-1
so has part: feature:5957412-5969629:-1:exon
subclass of: SO_0000010

119944785
type: Gene
SIO_000068: ncbigene

position:5957412:-1
position: 5957412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969629:-1
position: 5969629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5957412-5969629:-1:exon

CCDC196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CCDC196
product: coiled-coil domain containing 196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765929.1
SIO_010081: CCDC196
subclass of: SO_0000673
so part of: CCDC196
location: complement(join(5957412..5957545,5964395..5964484,5965897..5965947,5967278..5967386,5969306..5969452,5969543..5969629))
location: region:5957412-5969629:-1
so has part: feature:5969543-5969629:-1:exon
so has part: feature:5969306-5969452:-1:exon
so has part: feature:5967278-5967386:-1:exon
so has part: feature:5965897-5965947:-1:exon
so has part: feature:5964395-5964484:-1:exon
so has part: feature:5957412-5957545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5969543-5969629:-1:exon

position:5969543:-1
position: 5969543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5969306-5969452:-1:exon

position:5969306:-1
position: 5969306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969452:-1
position: 5969452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5967278-5967386:-1:exon

position:5967278:-1
position: 5967278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5967386:-1
position: 5967386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5965897-5965947:-1:exon

position:5965897:-1
position: 5965897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5965947:-1
position: 5965947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5964395-5964484:-1:exon

position:5964395:-1
position: 5964395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5964484:-1
position: 5964484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5957412-5957545:-1:exon

position:5957545:-1
position: 5957545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CCDC196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative coiled-coil domain-containing protein 196
translation: MSNTRSPGDLHDVLSVSETRYSRAVLQLKELNDDLKKKKQELKEMLSPLEGENGILFQKLMINLEEKQRSLQIMARIVAGKEDDSDDPLIHSLEMIEEAELLKQNLEKRNEMLRKEMEMLWSKDHQQDEYSDLLKQLLHKNKDEIQVLRALAQMETRSA
SIO_010081: CCDC196
subclass of: SO_0000673
so part of: CCDC196
location: complement(join(5957525..5957545,5964395..5964484,5965897..5965947,5967278..5967386,5969306..5969452,5969543..5969604))
location: region:5957525-5969604:-1
so has part: feature:5969543-5969604:-1:exon
so has part: feature:5969306-5969452:-1:exon
so has part: feature:5967278-5967386:-1:exon
so has part: feature:5965897-5965947:-1:exon
so has part: feature:5964395-5964484:-1:exon
so has part: feature:5957525-5957545:-1:exon

XP_038621857.1
type: Protein
SIO_000068: ncbiprotein

position:5957525:-1
position: 5957525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969604:-1
position: 5969604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5969543-5969604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5969306-5969452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5967278-5967386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5965897-5965947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5964395-5964484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5957525-5957545:-1:exon

LOC119944902
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944902
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5972748..5972885)
location: region:5972748-5972885:-1
so has part: feature:5972748-5972885:-1:exon
subclass of: SO_0000578

119944902
type: Gene
SIO_000068: ncbigene

position:5972748:-1
position: 5972748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5972885:-1
position: 5972885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5972748-5972885:-1:exon

LOC119944902
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119944902
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005456043.1
SIO_010081: LOC119944902
subclass of: SO_0000673
so part of: LOC119944902
location: complement(5972748..5972885)
location: region:5972748-5972885:-1
so has part: feature:5972748-5972885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5972748-5972885:-1:exon

PIGH
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PIGH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6014673..6023376)
location: region:6014673-6023376:-1
so has part: feature:6014673-6023376:-1:exon
subclass of: SO_0000010

119944492
type: Gene
SIO_000068: ncbigene

position:6014673:-1
position: 6014673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6023376:-1
position: 6023376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6014673-6023376:-1:exon

PIGH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PIGH
product: phosphatidylinositol glycan anchor biosynthesis class H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765435.1
SIO_010081: PIGH
subclass of: SO_0000673
so part of: PIGH
location: complement(join(6014673..6015130,6017758..6017841,6020769..6020978,6023194..6023376))
location: region:6014673-6023376:-1
so has part: feature:6023194-6023376:-1:exon
so has part: feature:6020769-6020978:-1:exon
so has part: feature:6017758-6017841:-1:exon
so has part: feature:6014673-6015130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6023194-6023376:-1:exon

position:6023194:-1
position: 6023194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6020769-6020978:-1:exon

position:6020769:-1
position: 6020769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6020978:-1
position: 6020978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6017758-6017841:-1:exon

position:6017758:-1
position: 6017758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6017841:-1
position: 6017841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6014673-6015130:-1:exon

position:6015130:-1
position: 6015130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PIGH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol N-acetylglucosaminyltransferase subunit H
translation: MAEAGRWFCAVGGGALALRRRSYSPTCREFCLDCPRLSLRALSAATCTVWLAAYGLFALCQNSIVLSAAIVLTLVGLLGYLHFVKIDQESLLVIGSLGIQMTASYASGKESTTFIEMGLVKDVVINEAIYMHKVIYYLCILLQDPGDQQGVSQVVPVFQSAKPRLDCLIEVYRSCQEILAHRQAPSPLP
SIO_010081: PIGH
subclass of: SO_0000673
so part of: PIGH
location: complement(join(6015038..6015130,6017758..6017841,6020769..6020978,6023194..6023376))
location: region:6015038-6023376:-1
so has part: feature:6023194-6023376:-1:exon
so has part: feature:6020769-6020978:-1:exon
so has part: feature:6017758-6017841:-1:exon
so has part: feature:6015038-6015130:-1:exon

XP_038621363.1
type: Protein
SIO_000068: ncbiprotein

position:6015038:-1
position: 6015038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6023194-6023376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6020769-6020978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6017758-6017841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6015038-6015130:-1:exon

ARG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ARG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6029162..6066039
location: region:6029162-6066039:1
so has part: feature:6029162-6066039:1:exon
subclass of: SO_0000010

119944493
type: Gene
SIO_000068: ncbigene

position:6029162:1
position: 6029162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6066039:1
position: 6066039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6029162-6066039:1:exon

ARG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARG2
product: arginase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765436.1
SIO_010081: ARG2
subclass of: SO_0000673
so part of: ARG2
location: join(6029162..6029222,6029407..6029579,6029705..6029777,6051056..6051233,6056201..6056360,6060936..6061030,6061200..6061304,6064027..6064163,6065834..6066039)
location: region:6029162-6066039:1
so has part: feature:6029162-6029222:1:exon
so has part: feature:6029407-6029579:1:exon
so has part: feature:6029705-6029777:1:exon
so has part: feature:6051056-6051233:1:exon
so has part: feature:6056201-6056360:1:exon
so has part: feature:6060936-6061030:1:exon
so has part: feature:6061200-6061304:1:exon
so has part: feature:6064027-6064163:1:exon
so has part: feature:6065834-6066039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6029162-6029222:1:exon

position:6029222:1
position: 6029222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6029407-6029579:1:exon

position:6029407:1
position: 6029407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6029579:1
position: 6029579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6029705-6029777:1:exon

position:6029705:1
position: 6029705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6029777:1
position: 6029777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6051056-6051233:1:exon

position:6051056:1
position: 6051056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6051233:1
position: 6051233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6056201-6056360:1:exon

position:6056201:1
position: 6056201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6056360:1
position: 6056360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6060936-6061030:1:exon

position:6060936:1
position: 6060936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6061030:1
position: 6061030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6061200-6061304:1:exon

position:6061200:1
position: 6061200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6061304:1
position: 6061304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6064027-6064163:1:exon

position:6064027:1
position: 6064027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6064163:1
position: 6064163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6065834-6066039:1:exon

position:6065834:1
position: 6065834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginase-2, mitochondrial
translation: MGREPFVGVVCAPRVRWAGPASVAGGRADGRTAGLSVRRRRAGMWVWRRLGVRWGPGVRPCRWAHSVAVVGAPFARGQRRRGVELGPGAVKEAGLLARLANLGYRVHDFGDLSFTSVPDDELYNNRILNPRSVGRANQELADVVNRAVSDGHSCITVGGDHSLAIGSISGHARKCSDLCVLWVDAHADINTPLTTSSGNLHGQPVSFLLRELQDKVPLLPGFSWVKPCLSGPDLVYLGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTLEQLVGKRQRPIHFSFDIDAFDPTLAPATGTPVMGGLSYREGMYISEEIHNTGLLSAVDLVEVNPLLAPSEEVKATARLAVDVIASCFGQTREGAHVAYDRLPGPGSPDESDGGQERLRI
SIO_010081: ARG2
subclass of: SO_0000673
so part of: ARG2
location: join(6029162..6029222,6029407..6029579,6029705..6029777,6051056..6051233,6056201..6056360,6060936..6061030,6061200..6061304,6064027..6064163,6065834..6066039)
location: region:6029162-6066039:1
so has part: feature:6029162-6029222:1:exon
so has part: feature:6029407-6029579:1:exon
so has part: feature:6029705-6029777:1:exon
so has part: feature:6051056-6051233:1:exon
so has part: feature:6056201-6056360:1:exon
so has part: feature:6060936-6061030:1:exon
so has part: feature:6061200-6061304:1:exon
so has part: feature:6064027-6064163:1:exon
so has part: feature:6065834-6066039:1:exon

XP_038621364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6029162-6029222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6029407-6029579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6029705-6029777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6051056-6051233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6056201-6056360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6060936-6061030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6061200-6061304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6064027-6064163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6065834-6066039:1:exon

VTI1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: VTI1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6066182..6087621)
location: region:6066182-6087621:-1
so has part: feature:6066182-6087621:-1:exon
subclass of: SO_0000010

119944499
type: Gene
SIO_000068: ncbigene

position:6066182:-1
position: 6066182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6087621:-1
position: 6087621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6066182-6087621:-1:exon

VTI1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VTI1B
product: vesicle transport through interaction with t-SNAREs 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038765446.1
SIO_010081: VTI1B
subclass of: SO_0000673
so part of: VTI1B
location: complement(join(6066182..6066559,6067687..6067748,6071242..6071403,6077168..6077359,6078259..6078317,6086933..6087621))
location: region:6066182-6087621:-1
so has part: feature:6086933-6087621:-1:exon
so has part: feature:6078259-6078317:-1:exon
so has part: feature:6077168-6077359:-1:exon
so has part: feature:6071242-6071403:-1:exon
so has part: feature:6067687-6067748:-1:exon
so has part: feature:6066182-6066559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6086933-6087621:-1:exon

position:6086933:-1
position: 6086933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6078259-6078317:-1:exon

position:6078259:-1
position: 6078259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6078317:-1
position: 6078317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6077168-6077359:-1:exon

position:6077168:-1
position: 6077168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6077359:-1
position: 6077359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6071242-6071403:-1:exon

position:6071242:-1
position: 6071242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6071403:-1
position: 6071403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6067687-6067748:-1:exon

position:6067687:-1
position: 6067687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6067748:-1
position: 6067748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6066182-6066559:-1:exon

position:6066559:-1
position: 6066559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VTI1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: VTI1B
product: vesicle transport through interaction with t-SNAREs 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038765445.1
SIO_010081: VTI1B
subclass of: SO_0000673
so part of: VTI1B
location: complement(join(6066182..6066559,6067687..6067748,6071242..6071415,6077168..6077359,6078259..6078317,6086933..6087619))
location: region:6066182-6087619:-1
so has part: feature:6086933-6087619:-1:exon
so has part: feature:6078259-6078317:-1:exon
so has part: feature:6077168-6077359:-1:exon
so has part: feature:6071242-6071415:-1:exon
so has part: feature:6067687-6067748:-1:exon
so has part: feature:6066182-6066559:-1:exon

position:6087619:-1
position: 6087619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6086933-6087619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078259-6078317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6077168-6077359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6071242-6071415:-1:exon

position:6071415:-1
position: 6071415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6067687-6067748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6066182-6066559:-1:exon

VTI1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VTI1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport through interaction with t-SNAREs homolog 1B isoform X2
translation: MSSEPVEKLHDIFRGLHDELRRAPARMLACAGGEERKKLIRDFDEKQQEANETLAEMEEELRGAPLAFRNSMMTKLRAYKKDLAKLQREMRSAPPVSGPGARRDAKYGDYALENEQAAQRALLLQGTDSLNRASQSIERSHRIAAETDQVGSDIIEELGDQRDQLERTKSRLVNTSENLSRSRKILRSMSRRVTTNKLLLSMVILLELAILGGLVYYKFIRKH
SIO_010081: VTI1B
subclass of: SO_0000673
so part of: VTI1B
location: complement(join(6066463..6066559,6067687..6067748,6071242..6071403,6077168..6077359,6078259..6078317,6086933..6087032))
location: region:6066463-6087032:-1
so has part: feature:6086933-6087032:-1:exon
so has part: feature:6078259-6078317:-1:exon
so has part: feature:6077168-6077359:-1:exon
so has part: feature:6071242-6071403:-1:exon
so has part: feature:6067687-6067748:-1:exon
so has part: feature:6066463-6066559:-1:exon

XP_038621374.1
type: Protein
SIO_000068: ncbiprotein

position:6066463:-1
position: 6066463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6087032:-1
position: 6087032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6086933-6087032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078259-6078317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6077168-6077359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6071242-6071403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067687-6067748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6066463-6066559:-1:exon

VTI1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: VTI1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport through interaction with t-SNAREs homolog 1B isoform X1
translation: MSSEPVEKLHDIFRGLHDELRRAPARMLACAGGEERKKLIRDFDEKQQEANETLAEMEEELRGAPLAFRNSMMTKLRAYKKDLAKLQREMRSAPPVSGPGARRDAKYGDYALENEQATRLQAQRALLLQGTDSLNRASQSIERSHRIAAETDQVGSDIIEELGDQRDQLERTKSRLVNTSENLSRSRKILRSMSRRVTTNKLLLSMVILLELAILGGLVYYKFIRKH
SIO_010081: VTI1B
subclass of: SO_0000673
so part of: VTI1B
location: complement(join(6066463..6066559,6067687..6067748,6071242..6071415,6077168..6077359,6078259..6078317,6086933..6087032))
location: region:6066463-6087032:-1
so has part: feature:6086933-6087032:-1:exon
so has part: feature:6078259-6078317:-1:exon
so has part: feature:6077168-6077359:-1:exon
so has part: feature:6071242-6071415:-1:exon
so has part: feature:6067687-6067748:-1:exon
so has part: feature:6066463-6066559:-1:exon

XP_038621373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6086933-6087032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078259-6078317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6077168-6077359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6071242-6071415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6067687-6067748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6066463-6066559:-1:exon

LOC119944623
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6091526..6104671)
location: region:6091526-6104671:-1
so has part: feature:6091526-6104671:-1:exon
subclass of: SO_0000010

119944623
type: Gene
SIO_000068: ncbigene

position:6091526:-1
position: 6091526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6104671:-1
position: 6104671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6091526-6104671:-1:exon

LOC119944623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944623
product: retinol dehydrogenase 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038765651.1
SIO_010081: LOC119944623
subclass of: SO_0000673
so part of: LOC119944623
location: complement(join(6091526..6091961,6092915..6093104,6096661..6096870,6097347..6097451,6099788..6099943,6100766..6100884,6104561..6104671))
location: region:6091526-6104671:-1
so has part: feature:6104561-6104671:-1:exon
so has part: feature:6100766-6100884:-1:exon
so has part: feature:6099788-6099943:-1:exon
so has part: feature:6097347-6097451:-1:exon
so has part: feature:6096661-6096870:-1:exon
so has part: feature:6092915-6093104:-1:exon
so has part: feature:6091526-6091961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104561-6104671:-1:exon

position:6104561:-1
position: 6104561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6100766-6100884:-1:exon

position:6100766:-1
position: 6100766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6100884:-1
position: 6100884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6099788-6099943:-1:exon

position:6099788:-1
position: 6099788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6099943:-1
position: 6099943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6097347-6097451:-1:exon

position:6097347:-1
position: 6097347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6097451:-1
position: 6097451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6096661-6096870:-1:exon

position:6096661:-1
position: 6096661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6096870:-1
position: 6096870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6092915-6093104:-1:exon

position:6092915:-1
position: 6092915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6093104:-1
position: 6093104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6091526-6091961:-1:exon

position:6091961:-1
position: 6091961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119944623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 11-like
translation: MGPGLLLLAVSALLVAVPFVRKYFSNGVCRSTVRLHGKVAVITGANTGIGKETAKDLARRGARVIIACRDVQKGESAASEIRAETGNQQVLVRRLDLADTKSIRAFADRFLAEEKQLHILINNAGVMMCPYSKTADGFEMQLGVNHLGHFLLTHLLLGRLKESAPARVVNVSSLAHIIGKIHFHDLQGEKYYNHGLAYCHSKLANILFTRELARRLQGSGVTTYSVHPGTVRTELSRHSPLMKLSWWLFSFFTRSPREGAQTSLHCALAEGLESLNGEHFSECSLAWVSAQGRNETTARRLWNVSCELLGIQWE
SIO_010081: LOC119944623
subclass of: SO_0000673
so part of: LOC119944623
location: complement(join(6091859..6091961,6092915..6093104,6096661..6096870,6097347..6097451,6099788..6099943,6100766..6100884,6104561..6104622))
location: region:6091859-6104622:-1
so has part: feature:6104561-6104622:-1:exon
so has part: feature:6100766-6100884:-1:exon
so has part: feature:6099788-6099943:-1:exon
so has part: feature:6097347-6097451:-1:exon
so has part: feature:6096661-6096870:-1:exon
so has part: feature:6092915-6093104:-1:exon
so has part: feature:6091859-6091961:-1:exon

XP_038621579.1
type: Protein
SIO_000068: ncbiprotein

position:6091859:-1
position: 6091859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6104622:-1
position: 6104622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6104561-6104622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6100766-6100884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6099788-6099943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6097347-6097451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6096661-6096870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6092915-6093104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6091859-6091961:-1:exon

LOC119944797
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6109167..6130359
location: region:6109167-6130359:1
so has part: feature:6109167-6130359:1:exon
subclass of: SO_0000010

119944797
type: Gene
SIO_000068: ncbigene

position:6109167:1
position: 6109167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6130359:1
position: 6130359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6109167-6130359:1:exon

LOC119944797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119944797
product: retinol dehydrogenase 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038765945.1
SIO_010081: LOC119944797
subclass of: SO_0000673
so part of: LOC119944797
location: join(6109167..6109399,6110884..6111117,6117088..6117206,6119441..6119596,6122955..6123059,6123538..6123747,6123864..6124053,6129658..6130359)
location: region:6109167-6130359:1
so has part: feature:6109167-6109399:1:exon
so has part: feature:6110884-6111117:1:exon
so has part: feature:6117088-6117206:1:exon
so has part: feature:6119441-6119596:1:exon
so has part: feature:6122955-6123059:1:exon
so has part: feature:6123538-6123747:1:exon
so has part: feature:6123864-6124053:1:exon
so has part: feature:6129658-6130359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6109167-6109399:1:exon

position:6109399:1
position: 6109399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6110884-6111117:1:exon

position:6110884:1
position: 6110884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6111117:1
position: 6111117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6117088-6117206:1:exon

position:6117088:1
position: 6117088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117206:1
position: 6117206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6119441-6119596:1:exon

position:6119441:1
position: 6119441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6119596:1
position: 6119596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6122955-6123059:1:exon

position:6122955:1
position: 6122955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123059:1
position: 6123059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6123538-6123747:1:exon

position:6123538:1
position: 6123538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123747:1
position: 6123747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6123864-6124053:1:exon

position:6123864:1
position: 6123864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6124053:1
position: 6124053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6129658-6130359:1:exon

position:6129658:1
position: 6129658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119944797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119944797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 12-like
translation: MIGTLGLVAILALLLYKAAPYGRKYFAGGVCRSTARLHGKVVVITGANTGIGKETAKDLARRGARVIIACRDVLKGESAASEIRAGTGNQQVLVRRLDLADTKSIRAFADRFLAEEKQLHILINNAGVMMCPYSKTADGFEMHLGVNHLGHFLLTHLLLGRLKESAPARVVNVSSLAHILGKIRFHDLQGEKRYSGNLAYCHSKLANILFTRELARRLQGTGVTTYALHPGLVHSELVRHSLLMCLVWRLFSFFVKSSQEGAQTSLHCAVAEDLESLSGKYFSDCKRAPVSARGRNDATARRLWEVSCELLGIQWE
SIO_010081: LOC119944797
subclass of: SO_0000673
so part of: LOC119944797
location: join(6111050..6111117,6117088..6117206,6119441..6119596,6122955..6123059,6123538..6123747,6123864..6124053,6129658..6129760)
location: region:6111050-6129760:1
so has part: feature:6111050-6111117:1:exon
so has part: feature:6117088-6117206:1:exon
so has part: feature:6119441-6119596:1:exon
so has part: feature:6122955-6123059:1:exon
so has part: feature:6123538-6123747:1:exon
so has part: feature:6123864-6124053:1:exon
so has part: feature:6129658-6129760:1:exon

XP_038621873.1
type: Protein
SIO_000068: ncbiprotein

position:6111050:1
position: 6111050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6129760:1
position: 6129760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6111050-6111117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6117088-6117206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6119441-6119596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6122955-6123059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123538-6123747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6123864-6124053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6129658-6129760:1:exon

ZFYVE26
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZFYVE26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6138843..6253370)
location: region:6138843-6253370:-1
so has part: feature:6138843-6253370:-1:exon
subclass of: SO_0000010

119944598
type: Gene
SIO_000068: ncbigene

position:6138843:-1
position: 6138843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253370:-1
position: 6253370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6138843-6253370:-1:exon

ZFYVE26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZFYVE26
product: zinc finger FYVE-type containing 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765605.1
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6138843..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156753,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253370))
location: region:6138843-6253370:-1
so has part: feature:6253110-6253370:-1:exon
so has part: feature:6250662-6250740:-1:exon
so has part: feature:6245564-6245653:-1:exon
so has part: feature:6238828-6239350:-1:exon
so has part: feature:6236525-6236655:-1:exon
so has part: feature:6233571-6233735:-1:exon
so has part: feature:6231132-6231220:-1:exon
so has part: feature:6226963-6227126:-1:exon
so has part: feature:6224977-6225174:-1:exon
so has part: feature:6222055-6222654:-1:exon
so has part: feature:6217443-6217511:-1:exon
so has part: feature:6216021-6216172:-1:exon
so has part: feature:6214275-6214473:-1:exon
so has part: feature:6209625-6209888:-1:exon
so has part: feature:6204237-6204350:-1:exon
so has part: feature:6199360-6199524:-1:exon
so has part: feature:6196238-6196456:-1:exon
so has part: feature:6194025-6194130:-1:exon
so has part: feature:6190776-6191512:-1:exon
so has part: feature:6189428-6189624:-1:exon
so has part: feature:6186584-6186688:-1:exon
so has part: feature:6185560-6185682:-1:exon
so has part: feature:6182048-6182224:-1:exon
so has part: feature:6177339-6177585:-1:exon
so has part: feature:6174859-6174954:-1:exon
so has part: feature:6172473-6172636:-1:exon
so has part: feature:6170546-6170682:-1:exon
so has part: feature:6166144-6166175:-1:exon
so has part: feature:6165363-6165499:-1:exon
so has part: feature:6164066-6164286:-1:exon
so has part: feature:6160673-6160820:-1:exon
so has part: feature:6158415-6158624:-1:exon
so has part: feature:6156538-6156753:-1:exon
so has part: feature:6152437-6152634:-1:exon
so has part: feature:6149043-6149242:-1:exon
so has part: feature:6146817-6146958:-1:exon
so has part: feature:6144341-6144400:-1:exon
so has part: feature:6142586-6142768:-1:exon
so has part: feature:6142200-6142244:-1:exon
so has part: feature:6138843-6139747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253370:-1:exon

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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:6217443-6217511:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:6216021-6216172:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:6214275-6214473:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:6209625-6209888:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:6204237-6204350:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:6199360-6199524:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:6196238-6196456:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:6194025-6194130:-1:exon

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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:6189428-6189624:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:6186584-6186688:-1:exon

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urn:…
SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:6174859-6174954:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:6172473-6172636:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:6170546-6170682:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:6166144-6166175:-1:exon

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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:6158415-6158624:-1:exon

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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
SIO_000628: feature:6152437-6152634:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:6149043-6149242:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:6146817-6146958:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:6144341-6144400:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:6142586-6142768:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:6142200-6142244:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:6138843-6139747:-1:exon

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reference: sequence
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ZFYVE26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZFYVE26
product: zinc finger FYVE-type containing 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038765604.1
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6138843..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156756,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253370))
location: region:6138843-6253370:-1
so has part: feature:6253110-6253370:-1:exon
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so has part: feature:6186584-6186688:-1:exon
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so has part: feature:6142200-6142244:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250662-6250740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6238828-6239350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6233571-6233735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6217443-6217511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6216021-6216172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214275-6214473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6209625-6209888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6204237-6204350:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6199360-6199524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6196238-6196456:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6194025-6194130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6190776-6191512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6189428-6189624:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6186584-6186688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6185560-6185682:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6182048-6182224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6177339-6177585:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6174859-6174954:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6172473-6172636:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6170546-6170682:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6166144-6166175:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6165363-6165499:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6164066-6164286:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6160673-6160820:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6158415-6158624:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6156538-6156756:-1:exon

position:6156756:-1
position: 6156756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6152437-6152634:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6149043-6149242:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6146817-6146958:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6144341-6144400:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6142586-6142768:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6142200-6142244:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6138843-6139747:-1:exon

ZFYVE26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZFYVE26
product: zinc finger FYVE-type containing 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765606.1
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6138843..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156756,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6220103..6220186,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253370))
location: region:6138843-6253370:-1
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so has part: feature:6170546-6170682:-1:exon
so has part: feature:6166144-6166175:-1:exon
so has part: feature:6165363-6165499:-1:exon
so has part: feature:6164066-6164286:-1:exon
so has part: feature:6160673-6160820:-1:exon
so has part: feature:6158415-6158624:-1:exon
so has part: feature:6156538-6156756:-1:exon
so has part: feature:6152437-6152634:-1:exon
so has part: feature:6149043-6149242:-1:exon
so has part: feature:6146817-6146958:-1:exon
so has part: feature:6144341-6144400:-1:exon
so has part: feature:6142586-6142768:-1:exon
so has part: feature:6142200-6142244:-1:exon
so has part: feature:6138843-6139747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250662-6250740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6238828-6239350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6233571-6233735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6220103-6220186:-1:exon

position:6220103:-1
position: 6220103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6220186:-1
position: 6220186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6217443-6217511:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6216021-6216172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6214275-6214473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6209625-6209888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6204237-6204350:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6199360-6199524:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6196238-6196456:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6194025-6194130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6190776-6191512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6189428-6189624:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6186584-6186688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6185560-6185682:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6182048-6182224:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6177339-6177585:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6174859-6174954:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6172473-6172636:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6170546-6170682:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6166144-6166175:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6165363-6165499:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6164066-6164286:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6160673-6160820:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6158415-6158624:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6156538-6156756:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6152437-6152634:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6149043-6149242:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6146817-6146958:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6144341-6144400:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6142586-6142768:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6142200-6142244:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6138843-6139747:-1:exon

ZFYVE26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZFYVE26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger FYVE domain-containing protein 26 isoform X2
translation: MHPFGRESAAAQDQLFGFFRGCLRRGEWELARACLPQLRAPTTEPDRLEAILRALVACPTRLRCGAGFSPQKLAWIWLLVLEKWLAWDKKLLPAPLRRETEFLLLAEELPDDISEDVLKELHEVLAQEEVGPATESVRRKEGPAPGLSAGAASALWHLLTAAPRQARALLDLLLGEDACWASRAWPLQEKLVELLRQQLRSLRESAHRSPGRAEAIYGALGALRCPPEGLRPELRLLCEELLGACGTGGSPLREERLLGCLLRRPGRGLVALYGHVYAERTKERWPPAGALGKALPEPLDPEKVMLALFSSPDPAQSWKKAYFYCLSNNKHFLEQILVTALALLKEEDFDSLGRLLAGEFRPLGRLLVLLAWTQCRSLDNAKGLLQALHRTQDSHCDSLLRDACDALGTHVEVLEWSLRQNSSVIPEKDLLRHLHSGDNHSVLYSLHHLTHLPALKEEEVAELLRKVPAADPLPDPATASVSSLQGDCQNLTLFQAFCAMKYAIYALCVNFHQHSQCQDCPSGPLDGLSSTQELTRDSPVSSGASQLVSLYLSRCRQSLRRLPVPLRLEVLENIFSLLLVHSSDLHPEASVPEDYAEDAVEGRGPPGPSPSDGPQPPAPSERKAKRPSPVRARGLPQTPSSRPPGSTAPPPPDPSFLDLKHFARGSGGGFLTDEAAMEAFLGLLLQQLEEIRDRRRSEGPELAEARGSPDSGGDTEGRLHQFSKVLSEAQWRYKVVTSNRSTDGRDRTANPSLESTSSELSTSTSEGSPSALAGGSEAEGRLQTRPQDPLVPMMLAPPESLLASCILRGNFVEAHQVVFMFGLKSSPSCGELMFMERYQEVIRELAQVERNIESQASDGGGNNSTQRKTTSTLQAIGSAAAAGMVFYSISDVTDKLLGGPGDPVPSLREDFWIGRSRPEPGPPLRDVLEDLSPPAMAAFDLACTRCQLRKTCRQLLETAERRLRWSLDSRGRKLDCAAPNSLGIRGFPAVLQQISKILSYASAPQGKPEAVEETGGSYPRCSVAELLQLCCPSLTEDCIDHQTTVSQQLEQVLQSLTQALSLPDPKGPPLSCLVEQAAQKIPEVEAHPVQVNTHLLLKNLAQQTPAGDGQTAYVEAFFNYSNTLASVLLRSLSSEPDQATRVKAGNPFVLLKRSPSQLVSHLLFERQVPPERLASLLGQVSPRLSVPQVIISCCCEPLALRPALRSRQARALRTQLGRLAQLHAARSLPDVPLPPPEGAEAPAPSPPSHPALSDPPPSFLTASALAFLKSRSKLLAVLACLGASRGPRAPKPGLSWKEFRGRREVPLTPEQVSQEGEGLLAQFPVLEAFLLTSWRPLRGKSGEGQSLAAGLCAQACFSPFLLGLHSPAAPNALTEAFGEALAADDCPRALQLLETFGQDAEELSGVKDAVLGCAAASEKDGWHYLLPVKDATLRSQLALRFADKWPLEPNLEVLVYCVSDPAVPSELKSQLRNKLQELRVYRKILALQGAARWTDWQMLRNCCVEDPLNVTDVILEAKEYGLCEEWGCLYPIPRERLIALHQKHLLHLLDGGNHDKALQLLQRITDPVVRLAVTESSLDRRPGLAASHFLANYLTTHFEQELTATRHQEIQALYVGSKVLLTLPEPNRASYAHLSARPLLLLEQLLMNMKVDWATVAVRTLRQLLSGQEIGFTGEDVDALLARYAGKALDFPYSLKERRSDSMIHLQEIFSQVSEPETLSKSPSTEFSATFPSVSILQSPGPREKSLPPSQSSTEFVPPDKPPARQEWIPDETENTCMVCRNERFTMFSRRHHCRRCGRLVCSSCSTKKMPVEGCRENPARVCDQCYGFYNKEVAEEDLSYLEAPVSPARESPPYSAVVPLPKAAELEWTLDLNEEENELVRGEFYYEQAPSSSLCIAILNLHSDGIACGHQLIEHCCSLSRGLTNPEVDAGLLTAIMKQLLFSAKMMFVKAGRSQDLALCDSYISKVDVLNILVTAAYRHVPSLDQILQPAAVTRLRNQ…
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6139538..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156753,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253297))
location: region:6139538-6253297:-1
so has part: feature:6253110-6253297:-1:exon
so has part: feature:6250662-6250740:-1:exon
so has part: feature:6245564-6245653:-1:exon
so has part: feature:6238828-6239350:-1:exon
so has part: feature:6236525-6236655:-1:exon
so has part: feature:6233571-6233735:-1:exon
so has part: feature:6231132-6231220:-1:exon
so has part: feature:6226963-6227126:-1:exon
so has part: feature:6224977-6225174:-1:exon
so has part: feature:6222055-6222654:-1:exon
so has part: feature:6217443-6217511:-1:exon
so has part: feature:6216021-6216172:-1:exon
so has part: feature:6214275-6214473:-1:exon
so has part: feature:6209625-6209888:-1:exon
so has part: feature:6204237-6204350:-1:exon
so has part: feature:6199360-6199524:-1:exon
so has part: feature:6196238-6196456:-1:exon
so has part: feature:6194025-6194130:-1:exon
so has part: feature:6190776-6191512:-1:exon
so has part: feature:6189428-6189624:-1:exon
so has part: feature:6186584-6186688:-1:exon
so has part: feature:6185560-6185682:-1:exon
so has part: feature:6182048-6182224:-1:exon
so has part: feature:6177339-6177585:-1:exon
so has part: feature:6174859-6174954:-1:exon
so has part: feature:6172473-6172636:-1:exon
so has part: feature:6170546-6170682:-1:exon
so has part: feature:6166144-6166175:-1:exon
so has part: feature:6165363-6165499:-1:exon
so has part: feature:6164066-6164286:-1:exon
so has part: feature:6160673-6160820:-1:exon
so has part: feature:6158415-6158624:-1:exon
so has part: feature:6156538-6156753:-1:exon
so has part: feature:6152437-6152634:-1:exon
so has part: feature:6149043-6149242:-1:exon
so has part: feature:6146817-6146958:-1:exon
so has part: feature:6144341-6144400:-1:exon
so has part: feature:6142586-6142768:-1:exon
so has part: feature:6142200-6142244:-1:exon
so has part: feature:6139538-6139747:-1:exon

XP_038621533.1
type: Protein
SIO_000068: ncbiprotein

position:6139538:-1
position: 6139538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253297:-1
position: 6253297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250662-6250740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6238828-6239350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6233571-6233735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6217443-6217511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6216021-6216172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214275-6214473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6209625-6209888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6204237-6204350:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6199360-6199524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6196238-6196456:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6194025-6194130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6190776-6191512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6189428-6189624:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6186584-6186688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6185560-6185682:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6182048-6182224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6177339-6177585:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6174859-6174954:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6172473-6172636:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6170546-6170682:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6166144-6166175:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6165363-6165499:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6164066-6164286:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6160673-6160820:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6158415-6158624:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6156538-6156753:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6152437-6152634:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6149043-6149242:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6146817-6146958:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6144341-6144400:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6142586-6142768:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6142200-6142244:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6139538-6139747:-1:exon

ZFYVE26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZFYVE26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger FYVE domain-containing protein 26 isoform X1
translation: MHPFGRESAAAQDQLFGFFRGCLRRGEWELARACLPQLRAPTTEPDRLEAILRALVACPTRLRCGAGFSPQKLAWIWLLVLEKWLAWDKKLLPAPLRRETEFLLLAEELPDDISEDVLKELHEVLAQEEVGPATESVRRKEGPAPGLSAGAASALWHLLTAAPRQARALLDLLLGEDACWASRAWPLQEKLVELLRQQLRSLRESAHRSPGRAEAIYGALGALRCPPEGLRPELRLLCEELLGACGTGGSPLREERLLGCLLRRPGRGLVALYGHVYAERTKERWPPAGALGKALPEPLDPEKVMLALFSSPDPAQSWKKAYFYCLSNNKHFLEQILVTALALLKEEDFDSLGRLLAGEFRPLGRLLVLLAWTQCRSLDNAKGLLQALHRTQDSHCDSLLRDACDALGTHVEVLEWSLRQNSSVIPEKDLLRHLHSGDNHSVLYSLHHLTHLPALKEEEVAELLRKVPAADPLPDPATASVSSLQGDCQNLTLFQAFCAMKYAIYALCVNFHQHSQCQDCPSGPLDGLSSTQELTRDSPVSSGASQLVSLYLSRCRQSLRRLPVPLRLEVLENIFSLLLVHSSDLHPEASVPEDYAEDAVEGRGPPGPSPSDGPQPPAPSERKAKRPSPVRARGLPQTPSSRPPGSTAPPPPDPSFLDLKHFARGSGGGFLTDEAAMEAFLGLLLQQLEEIRDRRRSEGPELAEARGSPDSGGDTEGRLHQFSKVLSEAQWRYKVVTSNRSTDGRDRTANPSLESTSSELSTSTSEGSPSALAGGSEAEGRLQTRPQDPLVPMMLAPPESLLASCILRGNFVEAHQVVFMFGLKSSPSCGELMFMERYQEVIRELAQVERNIESQASDGGGNNSTQRKTTSTLQAIGSAAAAGMVFYSISDVTDKLLGGPGDPVPSLREDFWIGRSRPEPGPPLRDVLEDLSPPAMAAFDLACTRCQLRKTCRQLLETAERRLRWSLDSRGRKLDCAAPNSLGIRGFPAVLQQISKILSYASAPQGKPEAVEETGGSYPRCSVAELLQLCCPSLTEDCIDHQTTVSQQLEQVLQSLTQALSLPDPKGPPLSCLVEQAAQKIPEVEAHPVQVNTHLLLKNLAQQTPAGDGQTAYVEAFFNYSNTLASVLLRSLSSEPDQATRVKAGNPFVLLKRSPSQLVSHLLFERQVPPERLASLLGQVSPRLSVPQVIISCCCEPLALRPALRSRQARALRTQLGRLAQLHAARSLPDVPLPPPEGAEAPAPSPPSHPALSDPPPSFLTASALAFLKSRSKLLAVLACLGASRGPRAPKPGLSWKEFRGRREVPLTPEQVSQEGEGLLAQFPVLEAFLLTSWRPLRGKSGEGQSLAAGLCAQACFSPFLLGLHSPAAPNALTEAFGEALAADDCPRALQLLETFGQDAEELSGVKDAVLGCAAASEKDGWHYLLPVKDATLRSQLALRFADKWPLEPNLEVLVYCVSDPAVPSELKSQLRNKLQELRVYRKILALQGAARWTDWQMLRNCCVEDPLNVTDVILEAKEYGLCEEWGCLYPIPRERLIALHQKHLLHLLDGGNHDKALQLLQRITDPVVRLAVTESSLDRRPGLAASHFLANYLTTHFEQELTATRHQEIQALYVGSKVLLTLPEPNRASYAHLSARPLLLLEQLLMNMKVDWATVAVRTLRQLLSGQEIGFTGEDVDALLARYAGKALDFPYSLKERRSDSMIHLQEIFSQVSEPETLSKSPSTEFSATFPSVSILQSPGPREKSLPPSQSSTEFVPPDKPPARQEWIPDETENTCMVCRNERFTMFSRRHHCRRCGRLVCSSCSTKKMPVEGCRENPARVCDQCYGFYNKEVAEEDLSYLEAPVSPARESPPYSAVVPLPKAAELEWTLDLNEEENELVRGEFYYEQAPSSSLCIAILNLHSDGIACGHQLIEHCCSLSRGLTNPEVDAGLLTAIMKQLLFSAKMMFVKAGRSQDLALCDSYISKVDVLNILVTAAYRHVPSLDQILQPAAVTRLRNQ…
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6139538..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156756,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253297))
location: region:6139538-6253297:-1
so has part: feature:6253110-6253297:-1:exon
so has part: feature:6250662-6250740:-1:exon
so has part: feature:6245564-6245653:-1:exon
so has part: feature:6238828-6239350:-1:exon
so has part: feature:6236525-6236655:-1:exon
so has part: feature:6233571-6233735:-1:exon
so has part: feature:6231132-6231220:-1:exon
so has part: feature:6226963-6227126:-1:exon
so has part: feature:6224977-6225174:-1:exon
so has part: feature:6222055-6222654:-1:exon
so has part: feature:6217443-6217511:-1:exon
so has part: feature:6216021-6216172:-1:exon
so has part: feature:6214275-6214473:-1:exon
so has part: feature:6209625-6209888:-1:exon
so has part: feature:6204237-6204350:-1:exon
so has part: feature:6199360-6199524:-1:exon
so has part: feature:6196238-6196456:-1:exon
so has part: feature:6194025-6194130:-1:exon
so has part: feature:6190776-6191512:-1:exon
so has part: feature:6189428-6189624:-1:exon
so has part: feature:6186584-6186688:-1:exon
so has part: feature:6185560-6185682:-1:exon
so has part: feature:6182048-6182224:-1:exon
so has part: feature:6177339-6177585:-1:exon
so has part: feature:6174859-6174954:-1:exon
so has part: feature:6172473-6172636:-1:exon
so has part: feature:6170546-6170682:-1:exon
so has part: feature:6166144-6166175:-1:exon
so has part: feature:6165363-6165499:-1:exon
so has part: feature:6164066-6164286:-1:exon
so has part: feature:6160673-6160820:-1:exon
so has part: feature:6158415-6158624:-1:exon
so has part: feature:6156538-6156756:-1:exon
so has part: feature:6152437-6152634:-1:exon
so has part: feature:6149043-6149242:-1:exon
so has part: feature:6146817-6146958:-1:exon
so has part: feature:6144341-6144400:-1:exon
so has part: feature:6142586-6142768:-1:exon
so has part: feature:6142200-6142244:-1:exon
so has part: feature:6139538-6139747:-1:exon

XP_038621532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250662-6250740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6238828-6239350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6233571-6233735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6217443-6217511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6216021-6216172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214275-6214473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6209625-6209888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6204237-6204350:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6199360-6199524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6196238-6196456:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6194025-6194130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6190776-6191512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6189428-6189624:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6186584-6186688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6185560-6185682:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6182048-6182224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6177339-6177585:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6174859-6174954:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6172473-6172636:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6170546-6170682:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6166144-6166175:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6165363-6165499:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6164066-6164286:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6160673-6160820:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6158415-6158624:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6156538-6156756:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6152437-6152634:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6149043-6149242:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6146817-6146958:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6144341-6144400:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6142586-6142768:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6142200-6142244:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6139538-6139747:-1:exon

ZFYVE26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZFYVE26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger FYVE domain-containing protein 26 isoform X3
translation: MHPFGRESAAAQDQLFGFFRGCLRRGEWELARACLPQLRAPTTEPDRLEAILRALVACPTRLRCGAGFSPQKLAWIWLLVLEKWLAWDKKLLPAPLRRETEFLLLAEELPDDISEDVLKELHEVLAQEEVGPATESVRRKEGPAPGLSAGAASALWHLLTAAPRQARALLDLLLGEDACWASRAWPLQEKLVELLRQQLRSLRESAHRSPGRAEAIYGALGALRCPPEGLRPELRLLCEELLGACGTGGSPLREERLLGCLLRRPGRGLVALYGHVYAERTKERWPPAGALGKALPEPLDPEKVMLALFSSPDPAQSWKKAYFYCLSNNKHFLEQILVTALALLKEEDFDSLGRLLAGEFRPLGRLLVLLAWTQCRSLDNAKGLLQALHRTQDSHCDSLLRDACDALGTHVEVLEWSLRQNSSVIPEKDLLRHLHSGDNHSVLYSLHHLTHLPALKEEEVAELLRKVPAADPLPDPATASVSSLQGDCQNLTLFQAFCAMKYAIYALCVNFHQHSQCQDCPSGPLDGLSSTQELTRDSPVSSGASQLVSLYLSRCRQSLRRLPVPLRLEVLENIFSLLLVHSSDLHPEASVPEDYAEDAVEGRGPPGPSPSDGPQPPAPSERKAKRPSPVRARGLPQTPSSRPPGSTAPPPPDPSFLDLKHFARGSGGGFLTDEAAMEAFLGLLLQQLEEIRDRRRSEGPELAEARGSPDSGGDTEGRLHQFSKVLSEAQWRYKVVTSNRSTEEQPTAPRRCHPRAKRHSGLRRSRRTPRDGRDRTANPSLESTSSELSTSTSEGSPSALAGGSEAEGRLQTRPQDPLVPMMLAPPESLLASCILRGNFVEAHQVVFMFGLKSSPSCGELMFMERYQEVIRELAQVERNIESQASDGGGNNSTQRKTTSTLQAIGSAAAAGMVFYSISDVTDKLLGGPGDPVPSLREDFWIGRSRPEPGPPLRDVLEDLSPPAMAAFDLACTRCQLRKTCRQLLETAERRLRWSLDSRGRKLDCAAPNSLGIRGFPAVLQQISKILSYASAPQGKPEAVEETGGSYPRCSVAELLQLCCPSLTEDCIDHQTTVSQQLEQVLQSLTQALSLPDPKGPPLSCLVEQAAQKIPEVEAHPVQVNTHLLLKNLAQQTPAGDGQTAYVEAFFNYSNTLASVLLRSLSSEPDQATRVKAGNPFVLLKRSPSQLVSHLLFERQVPPERLASLLGQVSPRLSVPQVIISCCCEPLALRPALRSRQARALRTQLGRLAQLHAARSLPDVPLPPPEGAEAPAPSPPSHPALSDPPPSFLTASALAFLKSRSKLLAVLACLGASRGPRAPKPGLSWKEFRGRREVPLTPEQVSQEGEGLLAQFPVLEAFLLTSWRPLRGKSGEGQSLAAGLCAQACFSPFLLGLHSPAAPNALTEAFGEALAADDCPRALQLLETFGQDAEELSGVKDAVLGCAAASEKDGWHYLLPVKDATLRSQLALRFADKWPLEPNLEVLVYCVSDPAVPSELKSQLRNKLQELRVYRKILALQGAARWTDWQMLRNCCVEDPLNVTDVILEAKEYGLCEEWGCLYPIPRERLIALHQKHLLHLLDGGNHDKALQLLQRITDPVVRLAVTESSLDRRPGLAASHFLANYLTTHFEQELTATRHQEIQALYVGSKVLLTLPEPNRASYAHLSARPLLLLEQLLMNMKVDWATVAVRTLRQLLSGQEIGFTGEDVDALLARYAGKALDFPYSLKERRSDSMIHLQEIFSQVSEPETLSKSPSTEFSATFPSVSILQSPGPREKSLPPSQSSTEFVPPDKPPARQEWIPDETENTCMVCRNERFTMFSRRHHCRRCGRLVCSSCSTKKMPVEGCRENPARVCDQCYGFYNKEVAEEDLSYLEAPVSPARESPPYSAVVPLPKAAELEWTLDLNEEENELVRGEFYYEQAPSSSLCIAILNLHSDGIACGHQLIEHCCSLSRGLTNPEVDAGLLTAIMKQLLFSAKMMFVKAGRSQDLALCDSYISKVDVLN…
SIO_010081: ZFYVE26
subclass of: SO_0000673
so part of: ZFYVE26
location: complement(join(6139538..6139747,6142200..6142244,6142586..6142768,6144341..6144400,6146817..6146958,6149043..6149242,6152437..6152634,6156538..6156756,6158415..6158624,6160673..6160820,6164066..6164286,6165363..6165499,6166144..6166175,6170546..6170682,6172473..6172636,6174859..6174954,6177339..6177585,6182048..6182224,6185560..6185682,6186584..6186688,6189428..6189624,6190776..6191512,6194025..6194130,6196238..6196456,6199360..6199524,6204237..6204350,6209625..6209888,6214275..6214473,6216021..6216172,6217443..6217511,6220103..6220186,6222055..6222654,6224977..6225174,6226963..6227126,6231132..6231220,6233571..6233735,6236525..6236655,6238828..6239350,6245564..6245653,6250662..6250740,6253110..6253297))
location: region:6139538-6253297:-1
so has part: feature:6253110-6253297:-1:exon
so has part: feature:6250662-6250740:-1:exon
so has part: feature:6245564-6245653:-1:exon
so has part: feature:6238828-6239350:-1:exon
so has part: feature:6236525-6236655:-1:exon
so has part: feature:6233571-6233735:-1:exon
so has part: feature:6231132-6231220:-1:exon
so has part: feature:6226963-6227126:-1:exon
so has part: feature:6224977-6225174:-1:exon
so has part: feature:6222055-6222654:-1:exon
so has part: feature:6220103-6220186:-1:exon
so has part: feature:6217443-6217511:-1:exon
so has part: feature:6216021-6216172:-1:exon
so has part: feature:6214275-6214473:-1:exon
so has part: feature:6209625-6209888:-1:exon
so has part: feature:6204237-6204350:-1:exon
so has part: feature:6199360-6199524:-1:exon
so has part: feature:6196238-6196456:-1:exon
so has part: feature:6194025-6194130:-1:exon
so has part: feature:6190776-6191512:-1:exon
so has part: feature:6189428-6189624:-1:exon
so has part: feature:6186584-6186688:-1:exon
so has part: feature:6185560-6185682:-1:exon
so has part: feature:6182048-6182224:-1:exon
so has part: feature:6177339-6177585:-1:exon
so has part: feature:6174859-6174954:-1:exon
so has part: feature:6172473-6172636:-1:exon
so has part: feature:6170546-6170682:-1:exon
so has part: feature:6166144-6166175:-1:exon
so has part: feature:6165363-6165499:-1:exon
so has part: feature:6164066-6164286:-1:exon
so has part: feature:6160673-6160820:-1:exon
so has part: feature:6158415-6158624:-1:exon
so has part: feature:6156538-6156756:-1:exon
so has part: feature:6152437-6152634:-1:exon
so has part: feature:6149043-6149242:-1:exon
so has part: feature:6146817-6146958:-1:exon
so has part: feature:6144341-6144400:-1:exon
so has part: feature:6142586-6142768:-1:exon
so has part: feature:6142200-6142244:-1:exon
so has part: feature:6139538-6139747:-1:exon

XP_038621534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6253110-6253297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250662-6250740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6245564-6245653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6238828-6239350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236525-6236655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6233571-6233735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231132-6231220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6226963-6227126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6224977-6225174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6222055-6222654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6220103-6220186:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6217443-6217511:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6216021-6216172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6214275-6214473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6209625-6209888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6204237-6204350:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6199360-6199524:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6196238-6196456:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6194025-6194130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6190776-6191512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6189428-6189624:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6186584-6186688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6185560-6185682:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6182048-6182224:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6177339-6177585:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6174859-6174954:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6172473-6172636:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6170546-6170682:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6166144-6166175:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6165363-6165499:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6164066-6164286:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6160673-6160820:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6158415-6158624:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6156538-6156756:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6152437-6152634:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6149043-6149242:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6146817-6146958:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6144341-6144400:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6142586-6142768:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6142200-6142244:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6139538-6139747:-1:exon

RAD51B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RAD51B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6260667..6304312
location: region:6260667-6304312:1
so has part: feature:6260667-6304312:1:exon
subclass of: SO_0000010

119944495
type: Gene
SIO_000068: ncbigene

position:6260667:1
position: 6260667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6304312:1
position: 6304312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6260667-6304312:1:exon

RAD51B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RAD51B
product: RAD51 paralog B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038765437.1
SIO_010081: RAD51B
subclass of: SO_0000673
so part of: RAD51B
location: join(6260667..6260769,6264279..6264392,6275046..6275162,6285787..6285923,6300734..6300853,6302971..6303154,6304097..6304312)
location: region:6260667-6304312:1
so has part: feature:6260667-6260769:1:exon
so has part: feature:6264279-6264392:1:exon
so has part: feature:6275046-6275162:1:exon
so has part: feature:6285787-6285923:1:exon
so has part: feature:6300734-6300853:1:exon
so has part: feature:6302971-6303154:1:exon
so has part: feature:6304097-6304312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6260667-6260769:1:exon

position:6260769:1
position: 6260769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6264279-6264392:1:exon

position:6264279:1
position: 6264279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6264392:1
position: 6264392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6275046-6275162:1:exon

position:6275046:1
position: 6275046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6275162:1
position: 6275162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6285787-6285923:1:exon

position:6285787:1
position: 6285787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6285923:1
position: 6285923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6300734-6300853:1:exon

position:6300734:1
position: 6300734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6300853:1
position: 6300853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6302971-6303154:1:exon

position:6302971:1
position: 6302971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6303154:1
position: 6303154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6304097-6304312:1:exon

position:6304097:1
position: 6304097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAD51B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RAD51B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD51 homolog 2
translation: MASKKLRRTGLSQELCDQLNRHQIVTCQDFLSLSPMELMKMTGKSYPKVRELLHVVSRACAPKMQTAYGMKMERTSDPSPAFLPTTLSSLDEALRGGLACGSLTEVTGPAGCGKTQFCMMMSVLATLPTHLGGLEGTVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLSMSSKIHLFRELTCDEVLKRIESLEEEIISKRVKLVIIDSIASVVRKEFDTQLRGNLRERSNFLAREASLLKYLAEEFSIPSKLREAGDLVSQFVSRSWLLCQEYPIFANNWLFRLKFCTSIQDYSQSLAEIVRFLGHDFFTQSLQITGCSF
SIO_010081: RAD51B
subclass of: SO_0000673
so part of: RAD51B
location: join(6260686..6260769,6264279..6264392,6275046..6275162,6285787..6285923,6300734..6300853,6302971..6303154,6304097..6304312)
location: region:6260686-6304312:1
so has part: feature:6260686-6260769:1:exon
so has part: feature:6264279-6264392:1:exon
so has part: feature:6275046-6275162:1:exon
so has part: feature:6285787-6285923:1:exon
so has part: feature:6300734-6300853:1:exon
so has part: feature:6302971-6303154:1:exon
so has part: feature:6304097-6304312:1:exon

XP_038621365.1
type: Protein
SIO_000068: ncbiprotein

position:6260686:1
position: 6260686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6260686-6260769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6264279-6264392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6275046-6275162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6285787-6285923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300734-6300853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6302971-6303154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6304097-6304312:1:exon

LOC119944889
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119944889
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6435066..6435203)
location: region:6435066-6435203:-1
so has part: feature:6435066-6435203:-1:exon
subclass of: SO_0000578

119944889
type: Gene
SIO_000068: ncbigene

position:6435066:-1
position: 6435066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6435203:-1
position: 6435203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6435066-6435203:-1:exon