Tachyglossus aculeatus isolate mTacAcu1 chromosome 20, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome 20, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052085.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052085.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027619.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 32969621
topology: linear
so has quality: SO_0000987
location: 1..32969621
location: region:1-32969621:1
RO_0002162: 9261

NC_052085
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32969621:1
position: 32969621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32969621:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: 20
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

LOC119941636
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51616..76087)
location: region:51616-76087:-1
so has part: feature:51616-76087:-1:exon
subclass of: SO_0000010

119941636
type: Gene
SIO_000068: ncbigene

position:51616:-1
position: 51616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76087:-1
position: 76087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51616-76087:-1:exon

LOC119941636
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941636
product: centromere protein J-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762179.1
SIO_010081: LOC119941636
subclass of: SO_0000673
so part of: LOC119941636
location: complement(join(51616..52008,52416..52536,52632..52716,52808..52948,54834..54932,55263..55366,56925..57012,57580..57822,61631..61796,63768..63900,64655..66287,66425..66527,67358..67499,69770..69893,70384..70914,76002..76087))
location: region:51616-76087:-1
so has part: feature:76002-76087:-1:exon
so has part: feature:70384-70914:-1:exon
so has part: feature:69770-69893:-1:exon
so has part: feature:67358-67499:-1:exon
so has part: feature:66425-66527:-1:exon
so has part: feature:64655-66287:-1:exon
so has part: feature:63768-63900:-1:exon
so has part: feature:61631-61796:-1:exon
so has part: feature:57580-57822:-1:exon
so has part: feature:56925-57012:-1:exon
so has part: feature:55263-55366:-1:exon
so has part: feature:54834-54932:-1:exon
so has part: feature:52808-52948:-1:exon
so has part: feature:52632-52716:-1:exon
so has part: feature:52416-52536:-1:exon
so has part: feature:51616-52008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76002-76087:-1:exon

position:76002:-1
position: 76002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70384-70914:-1:exon

position:70384:-1
position: 70384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70914:-1
position: 70914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69770-69893:-1:exon

position:69770:-1
position: 69770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69893:-1
position: 69893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67358-67499:-1:exon

position:67358:-1
position: 67358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67499:-1
position: 67499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66425-66527:-1:exon

position:66425:-1
position: 66425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66527:-1
position: 66527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64655-66287:-1:exon

position:64655:-1
position: 64655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66287:-1
position: 66287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63768-63900:-1:exon

position:63768:-1
position: 63768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63900:-1
position: 63900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61631-61796:-1:exon

position:61631:-1
position: 61631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61796:-1
position: 61796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57580-57822:-1:exon

position:57580:-1
position: 57580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57822:-1
position: 57822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56925-57012:-1:exon

position:56925:-1
position: 56925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57012:-1
position: 57012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:55263-55366:-1:exon

position:55263:-1
position: 55263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55366:-1
position: 55366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:54834-54932:-1:exon

position:54834:-1
position: 54834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54932:-1
position: 54932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:52808-52948:-1:exon

position:52808:-1
position: 52808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52948:-1
position: 52948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:52632-52716:-1:exon

position:52632:-1
position: 52632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52716:-1
position: 52716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:52416-52536:-1:exon

position:52416:-1
position: 52416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52536:-1
position: 52536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:51616-52008:-1:exon

position:52008:-1
position: 52008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119941636
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J-like
translation: MPTSPDLNCWPSLGAQWLTDPSRAGVILNCDLPDLERDGENQSIRSLSSHFPVKTTPFSDSWSFMSEDSLSEEHILAPSNPNLIQLVATETCAGFPLPKTGQMVACEEVPDQREESINDSVSDSMGDVKVAAYKDPLFQKLEQLKEIQQKKQEQLKRQQLKQLQRLMEEQEKLLTMVSEQKALSEECSAPWEKTTEQLQEGKETDVLNSKREDSSGSYTGSKFGDGANFEERPIKAAIKERKQTFEEFLEEQIRIEEEELKQKQLQEVQGSTVAKTMPRRPFLKRGEGLARFTNAKCKFRRHGVNEAMTQSTLEHQPIGRVEKQQIQRKTSLINKERIAENSAPIKKCLQAARLKNGSGLLTQKARVLKSFSGKIHFSSATMVPPEKKLKGQFRDQSKVENSSHLEHNKENELECSQPVEVGCQVKNQAQGLANPSPTSNSLSFPNSPTCCLVRGSEHFQELSFQKKWENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQNACRRMSSTPVKSAQRQKTNAEESSPNNPNKKSDHHLLQEEKNPWEMPHSCCESRASSLTQRKEASKASRNAFQGSLAAEEQIEWQVRDEEEEEGNEGSSRDVRADPDELDVTVKTAGAGADKFFVSREGDPENRGCQEPFRHTKKEGKSRDMDLDLSDKDSSSSESSMGESISKKVLASPRRILCLNRSEMEFDDDRTWTDLEDADCDPDAPGRGLPQADCSNKSEISSPDKAIRRKVAPIRKDEEFCKPSTIERDTDSPSASNLMMKLFPSLKPKKKPGSSPGSESKLDIEQERRGGDGVQSQVLREKVFELETEIERFKAENACLARLRHERESGLEKLRKEIADFEKQKAKELVRFEDFKKEEMRKLQRERKVFEKYATAARAIPDKKEREEIQALKQQIMELQEDLKRKEAKWSSTHGRLRNQIETLARENSDLREEIKVIERFRVEAWKKAEAVESHQKTELSTGPAKKGEWGNSSIGSQKCQSPSSVTQYKKPGEGYPTVKEKLSRRCRSMPTDDQSNSDDRRPASVAESSKILMENPSPSRIFESTNCLPLGSKEEEIQEEISHPDGKVEKVLRNGCHVILFPNGTLKEVSSDGKTITITFFNGDVKQILPDQRVVYYYAVAQTTHTTYPEGLEVLHFSNGQIEKHYPDGRKEITFPDQTIKNLFVDGREESIFPDGTVVRVQRDGNKIIEFNNGQTELHTDKFKRREYPDGTVKTVYSNGHQETKYISGRVRIKDKDGNVLMDTKL
SIO_010081: LOC119941636
subclass of: SO_0000673
so part of: LOC119941636
location: complement(join(51816..52008,52416..52536,52632..52716,52808..52948,54834..54932,55263..55366,56925..57012,57580..57822,61631..61796,63768..63900,64655..66287,66425..66527,67358..67499,69770..69893,70384..70812))
location: region:51816-70812:-1
so has part: feature:70384-70812:-1:exon
so has part: feature:69770-69893:-1:exon
so has part: feature:67358-67499:-1:exon
so has part: feature:66425-66527:-1:exon
so has part: feature:64655-66287:-1:exon
so has part: feature:63768-63900:-1:exon
so has part: feature:61631-61796:-1:exon
so has part: feature:57580-57822:-1:exon
so has part: feature:56925-57012:-1:exon
so has part: feature:55263-55366:-1:exon
so has part: feature:54834-54932:-1:exon
so has part: feature:52808-52948:-1:exon
so has part: feature:52632-52716:-1:exon
so has part: feature:52416-52536:-1:exon
so has part: feature:51816-52008:-1:exon

XP_038618107.1
type: Protein
SIO_000068: ncbiprotein

position:51816:-1
position: 51816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70812:-1
position: 70812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70384-70812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69770-69893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67358-67499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66425-66527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64655-66287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63768-63900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61631-61796:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57580-57822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56925-57012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55263-55366:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54834-54932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52808-52948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52632-52716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52416-52536:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:51816-52008:-1:exon

MPHOSPH8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78930..102603
location: region:78930-102603:1
so has part: feature:78930-102603:1:exon
subclass of: SO_0000010

119941611
type: Gene
SIO_000068: ncbigene

position:78930:1
position: 78930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102603:1
position: 102603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78930-102603:1:exon

MPHOSPH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MPHOSPH8
product: M-phase phosphoprotein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038762150.1
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(78930..79154,84071..84223,85895..85948,87818..88651,90989..91082,92654..92908,94374..94499,94586..94674,95758..95898,98020..98106,100153..100307,100465..100619,100993..101120,101496..101579,102184..102603)
location: region:78930-102603:1
so has part: feature:78930-79154:1:exon
so has part: feature:84071-84223:1:exon
so has part: feature:85895-85948:1:exon
so has part: feature:87818-88651:1:exon
so has part: feature:90989-91082:1:exon
so has part: feature:92654-92908:1:exon
so has part: feature:94374-94499:1:exon
so has part: feature:94586-94674:1:exon
so has part: feature:95758-95898:1:exon
so has part: feature:98020-98106:1:exon
so has part: feature:100153-100307:1:exon
so has part: feature:100465-100619:1:exon
so has part: feature:100993-101120:1:exon
so has part: feature:101496-101579:1:exon
so has part: feature:102184-102603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78930-79154:1:exon

position:79154:1
position: 79154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84071-84223:1:exon

position:84071:1
position: 84071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84223:1
position: 84223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85895-85948:1:exon

position:85895:1
position: 85895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85948:1
position: 85948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87818-88651:1:exon

position:87818:1
position: 87818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88651:1
position: 88651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90989-91082:1:exon

position:90989:1
position: 90989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91082:1
position: 91082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92654-92908:1:exon

position:92654:1
position: 92654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92908:1
position: 92908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94374-94499:1:exon

position:94374:1
position: 94374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94499:1
position: 94499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94586-94674:1:exon

position:94586:1
position: 94586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94674:1
position: 94674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95758-95898:1:exon

position:95758:1
position: 95758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95898:1
position: 95898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:98020-98106:1:exon

position:98020:1
position: 98020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98106:1
position: 98106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:100153-100307:1:exon

position:100153:1
position: 100153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100307:1
position: 100307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:100465-100619:1:exon

position:100465:1
position: 100465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100619:1
position: 100619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:100993-101120:1:exon

position:100993:1
position: 100993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101120:1
position: 101120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:101496-101579:1:exon

position:101496:1
position: 101496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101579:1
position: 101579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:102184-102603:1:exon

position:102184:1
position: 102184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPHOSPH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase phosphoprotein 8
translation: MAAAAAGAGAPGPVSVPVSVPAPAPAPCRVTVTEAAPGVPEADEAMRAAEVGPESDEDEEDVFEVEKILDVKTEAGKILYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKIVDNKAKPVKKDIQIESEKFSRLEQTVWKDEKRLSLRDDVFEADSDSDWHSETKDDTSPKKKKKKSRHREDKSPDDPKKKKLKTGKLKEKPKTELDSSSESLIFDAKPKKRILEAKEDLKDSKKLKKEDLKELKKAKKTEIKDAKAKAKEDCKENKKVKKEKLGDSQVEAECSSVLYDFSGLLTDDDQEDLHSDGKEEKQKVPVGKDKLEQDVAEDATSDPQPEGTPSAEEGAKRKKKKLRKADEYKEESRRLENKDLCVERKSMHKKQKGQAKVSPGVDKLLSGFGHFPKSLKPGTEERSRRSTDQLGEEKELKKTEAKFSKKHDSEKEEKSRKEQKGLKTFKEISAFDLVKLTPEDKNDYSEGNRKREDASLDCKFVEDYKTKENKELYKERRSLREETDTWAYIAAEGDQEILESMCQVDDHSDGRQQVLSLGMDLQLEWMKMEDFLKHLDGEDETVAAADAIPSTLLRDAVKNGDYITVKIALNSNEDYNLDQEDSSGMTLVMLAAAGGQDDLLRLLIKKGAKVNGRQRNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIENGADCNILSKHQNSALHFAKQCNNVLVYDLLKNHLETLSRVAEDTIRDYFEARLAILEPVFPIACHRLCEGPDFSTEFNYKPPQNMAEGSGILLFVFHANFFGKEVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPVPGLNKLFIRLKEAPSAKVKLLISAYRVQLQ
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(78930..79154,84071..84223,85895..85948,87818..88651,90989..91082,92654..92908,94374..94499,94586..94674,95758..95898,98020..98106,100153..100307,100465..100619,100993..101120,101496..101579,102184..102225)
location: region:78930-102225:1
so has part: feature:78930-79154:1:exon
so has part: feature:84071-84223:1:exon
so has part: feature:85895-85948:1:exon
so has part: feature:87818-88651:1:exon
so has part: feature:90989-91082:1:exon
so has part: feature:92654-92908:1:exon
so has part: feature:94374-94499:1:exon
so has part: feature:94586-94674:1:exon
so has part: feature:95758-95898:1:exon
so has part: feature:98020-98106:1:exon
so has part: feature:100153-100307:1:exon
so has part: feature:100465-100619:1:exon
so has part: feature:100993-101120:1:exon
so has part: feature:101496-101579:1:exon
so has part: feature:102184-102225:1:exon

XP_038618078.1
type: Protein
SIO_000068: ncbiprotein

position:102225:1
position: 102225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78930-79154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84071-84223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85895-85948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87818-88651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90989-91082:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92654-92908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94374-94499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94586-94674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95758-95898:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98020-98106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100153-100307:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100465-100619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100993-101120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101496-101579:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102184-102225:1:exon

PSPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92072..177168)
location: region:92072-177168:-1
so has part: feature:92072-177168:-1:exon
subclass of: SO_0000010

119941498
type: Gene
SIO_000068: ncbigene

position:92072:-1
position: 92072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177168:-1
position: 177168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92072-177168:-1:exon

PSPC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005455218.1
SIO_010081: PSPC1
so part of: PSPC1
location: complement(join(92072..92467,104341..104468,105782..105846,106466..106540,108546..108631,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:92072-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:108546-108631:-1:exon
so has part: feature:106466-106540:-1:exon
so has part: feature:105782-105846:-1:exon
so has part: feature:104341-104468:-1:exon
so has part: feature:92072-92467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

position:176594:-1
position: 176594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

position:169297:-1
position: 169297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169598:-1
position: 169598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

position:164171:-1
position: 164171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164266:-1
position: 164266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

position:162881:-1
position: 162881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163077:-1
position: 163077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

position:160580:-1
position: 160580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160664:-1
position: 160664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

position:158175:-1
position: 158175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158280:-1
position: 158280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108546-108631:-1:exon

position:108546:-1
position: 108546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108631:-1
position: 108631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106466-106540:-1:exon

position:106466:-1
position: 106466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106540:-1
position: 106540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105782-105846:-1:exon

position:105782:-1
position: 105782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105846:-1
position: 105846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104341-104468:-1:exon

position:104341:-1
position: 104341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104468:-1
position: 104468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92072-92467:-1:exon

position:92467:-1
position: 92467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761966.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(117666..117756,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:117666-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:117666-117756:-1:exon

position:117666:-1
position: 117666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117666-117756:-1:exon

position:117756:-1
position: 117756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X3
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENWSGQKNHSPPAAWSPRTQRDRSIG
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(117682..117756,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:117682-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:117682-117756:-1:exon

XP_038617894.1
type: Protein
SIO_000068: ncbiprotein

position:117682:-1
position: 117682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177100:-1
position: 177100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117682-117756:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761968.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(121940..122010,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:121940-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:121940-122010:-1:exon

position:121940:-1
position: 121940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121940-122010:-1:exon

position:122010:-1
position: 122010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X5
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENGFQRMGQQELLADLIRC
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(121957..122010,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:121957-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:121957-122010:-1:exon

XP_038617896.1
type: Protein
SIO_000068: ncbiprotein

position:121957:-1
position: 121957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121957-122010:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761967.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(126977..127351,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:126977-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:126977-127351:-1:exon

position:126977:-1
position: 126977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126977-127351:-1:exon

position:127351:-1
position: 127351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X4
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENQSVSVGGSGRDQAKLMH
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(127298..127351,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:127298-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:127298-127351:-1:exon

XP_038617895.1
type: Protein
SIO_000068: ncbiprotein

position:127298:-1
position: 127298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127298-127351:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761965.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(130941..131745,133780..133949,138067..138124,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:130941-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:138067-138124:-1:exon
so has part: feature:133780-133949:-1:exon
so has part: feature:130941-131745:-1:exon

position:130941:-1
position: 130941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138067-138124:-1:exon

position:138067:-1
position: 138067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138124:-1
position: 138124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133780-133949:-1:exon

position:133780:-1
position: 133780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133949:-1
position: 133949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:130941-131745:-1:exon

position:131745:-1
position: 131745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761963.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(130941..131756,133780..133949,138067..138124,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:130941-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:138067-138124:-1:exon
so has part: feature:133780-133949:-1:exon
so has part: feature:130941-131756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138067-138124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133780-133949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:130941-131756:-1:exon

position:131756:-1
position: 131756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X1
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPLGPGPAMGPDGAASLGTPMMPDNGAVHNDRFPQGPPTQMGSPMGSRTGTETPQPPLSGVGPVSGGPGGFGRGNQGGNFEGPNKRRRY
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(131571..131756,133780..133949,138067..138124,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:131571-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:138067-138124:-1:exon
so has part: feature:133780-133949:-1:exon
so has part: feature:131571-131756:-1:exon

XP_038617891.1
type: Protein
SIO_000068: ncbiprotein

position:131571:-1
position: 131571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138067-138124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133780-133949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131571-131756:-1:exon

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X2
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPLGPGPAMGPDGAASLGTPMMPDNGAVIPTRTTNTDGFTYG
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(131701..131745,133780..133949,138067..138124,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:131701-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:138067-138124:-1:exon
so has part: feature:133780-133949:-1:exon
so has part: feature:131701-131745:-1:exon

XP_038617893.1
type: Protein
SIO_000068: ncbiprotein

position:131701:-1
position: 131701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138067-138124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133780-133949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131701-131745:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSPC1
product: paraspeckle component 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761969.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(139211..139276,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177168))
location: region:139211-177168:-1
so has part: feature:176594-177168:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:139211-139276:-1:exon

position:139211:-1
position: 139211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139211-139276:-1:exon

position:139276:-1
position: 139276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X6
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAAAVVAAAAAGGDGETTTATATTTAAAMALTVKAEPASPPPPAAAPEERPEEEAAAVTVAAAAPAPAPPPVPVPVPVPGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENVNSLQTDERSEYSSEE
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(139226..139276,158175..158280,160580..160664,162881..163077,164171..164266,169297..169598,176594..177100))
location: region:139226-177100:-1
so has part: feature:176594-177100:-1:exon
so has part: feature:169297-169598:-1:exon
so has part: feature:164171-164266:-1:exon
so has part: feature:162881-163077:-1:exon
so has part: feature:160580-160664:-1:exon
so has part: feature:158175-158280:-1:exon
so has part: feature:139226-139276:-1:exon

XP_038617897.1
type: Protein
SIO_000068: ncbiprotein

position:139226:-1
position: 139226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176594-177100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169297-169598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164171-164266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162881-163077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160580-160664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158175-158280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139226-139276:-1:exon

ZMYM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 231471..297138
location: region:231471-297138:1
so has part: feature:231471-297138:1:exon
subclass of: SO_0000010

119941182
type: Gene
SIO_000068: ncbigene

position:231471:1
position: 231471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297138:1
position: 297138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231471-297138:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761493.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231471..232318,234838..235123,247232..247397,251083..251295,257761..257832,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..297138)
location: region:231471-297138:1
so has part: feature:231471-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:257761-257832:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-297138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231471-232318:1:exon

position:232318:1
position: 232318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234838-235123:1:exon

position:234838:1
position: 234838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235123:1
position: 235123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247232-247397:1:exon

position:247232:1
position: 247232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247397:1
position: 247397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251083-251295:1:exon

position:251083:1
position: 251083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251295:1
position: 251295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257761-257832:1:exon

position:257761:1
position: 257761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257832:1
position: 257832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262164-262314:1:exon

position:262164:1
position: 262164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262314:1
position: 262314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262856-262971:1:exon

position:262856:1
position: 262856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262971:1
position: 262971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263871-263987:1:exon

position:263871:1
position: 263871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263987:1
position: 263987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:264733-264883:1:exon

position:264733:1
position: 264733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264883:1
position: 264883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:269179-269351:1:exon

position:269179:1
position: 269179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269351:1
position: 269351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:276716-276881:1:exon

position:276716:1
position: 276716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276881:1
position: 276881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:279534-279568:1:exon

position:279534:1
position: 279534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279568:1
position: 279568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:282261-282390:1:exon

position:282261:1
position: 282261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282390:1
position: 282390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:282527-282642:1:exon

position:282527:1
position: 282527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282642:1
position: 282642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:283448-283619:1:exon

position:283448:1
position: 283448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283619:1
position: 283619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:284810-284938:1:exon

position:284810:1
position: 284810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284938:1
position: 284938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:286696-286790:1:exon

position:286696:1
position: 286696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286790:1
position: 286790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:288067-288235:1:exon

position:288067:1
position: 288067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288235:1
position: 288235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:288478-288629:1:exon

position:288478:1
position: 288478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288629:1
position: 288629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:292435-292549:1:exon

position:292435:1
position: 292435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292549:1
position: 292549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:293392-293643:1:exon

position:293392:1
position: 293392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293643:1
position: 293643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:293882-294002:1:exon

position:293882:1
position: 293882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294002:1
position: 294002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:296277-297138:1:exon

position:296277:1
position: 296277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761494.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231471..232318,234838..235123,247232..247397,251083..251295,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..297138)
location: region:231471-297138:1
so has part: feature:231471-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-297138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231471-232318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234838-235123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247232-247397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251083-251295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262164-262314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262856-262971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263871-263987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264733-264883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:269179-269351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276716-276881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279534-279568:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282261-282390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282527-282642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283448-283619:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:284810-284938:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:286696-286790:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:288067-288235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:288478-288629:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292435-292549:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:293392-293643:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:293882-294002:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:296277-297138:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761495.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231471..231963,232225..232318,234838..235123,247232..247397,251083..251295,257761..257832,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..297138)
location: region:231471-297138:1
so has part: feature:231471-231963:1:exon
so has part: feature:232225-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:257761-257832:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-297138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231471-231963:1:exon

position:231963:1
position: 231963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232225-232318:1:exon

position:232225:1
position: 232225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234838-235123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247232-247397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251083-251295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257761-257832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262164-262314:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262856-262971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263871-263987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264733-264883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269179-269351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276716-276881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:279534-279568:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:282261-282390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282527-282642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:283448-283619:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284810-284938:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:286696-286790:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288067-288235:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:288478-288629:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:292435-292549:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:293392-293643:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:293882-294002:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:296277-297138:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVPRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPALADQRNVTFTSAKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGPEKNASSFTERRLPEAKNRANDLDFSASSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGISSVNDGQLENSDGRDMNLMITHVTSLQNANMGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTTCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQVGSHPTFLKEVRDHMQDSFLMQSEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFVSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLREQVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPVPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKSKVSSTPPDTELLTMTDMMAEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTQTLGHDHLLLDELESTKSVKLKEDLLSHSTTELSHGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSDSPVWYSSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231472..232318,234838..235123,247232..247397,251083..251295,257761..257832,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..296469)
location: region:231472-296469:1
so has part: feature:231472-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:257761-257832:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-296469:1:exon

XP_038617421.1
type: Protein
SIO_000068: ncbiprotein

position:231472:1
position: 231472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296469:1
position: 296469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231472-232318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234838-235123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247232-247397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251083-251295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257761-257832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262164-262314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262856-262971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263871-263987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264733-264883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:269179-269351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276716-276881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:279534-279568:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282261-282390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:282527-282642:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:283448-283619:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284810-284938:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:286696-286790:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:288067-288235:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288478-288629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:292435-292549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:293392-293643:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:293882-294002:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:296277-296469:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X2
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVPRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPALADQRNVTFTSAKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGPEKNASSFTERRLPEAKNRANDLDFSASSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGISSVNDGQLENSDGRDMNLMITHVTSLQNANMGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTTCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFVSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLREQVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPVPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKSKVSSTPPDTELLTMTDMMAEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTQTLGHDHLLLDELESTKSVKLKEDLLSHSTTELSHGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSDSPVWYSSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231472..232318,234838..235123,247232..247397,251083..251295,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..296469)
location: region:231472-296469:1
so has part: feature:231472-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-296469:1:exon

XP_038617422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231472-232318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234838-235123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247232-247397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251083-251295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262164-262314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262856-262971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263871-263987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264733-264883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:269179-269351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276716-276881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279534-279568:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282261-282390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282527-282642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283448-283619:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:284810-284938:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:286696-286790:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:288067-288235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:288478-288629:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292435-292549:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:293392-293643:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:293882-294002:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:296277-296469:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X3
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVPRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPALADQRNVTFTSAKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGPEKNASSFTERRLPEAKNRANDLDFSASSFSRSKTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTTCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQVGSHPTFLKEVRDHMQDSFLMQSEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFVSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLREQVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPVPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKSKVSSTPPDTELLTMTDMMAEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTQTLGHDHLLLDELESTKSVKLKEDLLSHSTTELSHGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSDSPVWYSSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(231472..231963,232225..232318,234838..235123,247232..247397,251083..251295,257761..257832,262164..262314,262856..262971,263871..263987,264733..264883,269179..269351,276716..276881,279534..279568,282261..282390,282527..282642,283448..283619,284810..284938,286696..286790,288067..288235,288478..288629,292435..292549,293392..293643,293882..294002,296277..296469)
location: region:231472-296469:1
so has part: feature:231472-231963:1:exon
so has part: feature:232225-232318:1:exon
so has part: feature:234838-235123:1:exon
so has part: feature:247232-247397:1:exon
so has part: feature:251083-251295:1:exon
so has part: feature:257761-257832:1:exon
so has part: feature:262164-262314:1:exon
so has part: feature:262856-262971:1:exon
so has part: feature:263871-263987:1:exon
so has part: feature:264733-264883:1:exon
so has part: feature:269179-269351:1:exon
so has part: feature:276716-276881:1:exon
so has part: feature:279534-279568:1:exon
so has part: feature:282261-282390:1:exon
so has part: feature:282527-282642:1:exon
so has part: feature:283448-283619:1:exon
so has part: feature:284810-284938:1:exon
so has part: feature:286696-286790:1:exon
so has part: feature:288067-288235:1:exon
so has part: feature:288478-288629:1:exon
so has part: feature:292435-292549:1:exon
so has part: feature:293392-293643:1:exon
so has part: feature:293882-294002:1:exon
so has part: feature:296277-296469:1:exon

XP_038617423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231472-231963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232225-232318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234838-235123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247232-247397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251083-251295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257761-257832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262164-262314:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262856-262971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263871-263987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264733-264883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269179-269351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276716-276881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:279534-279568:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:282261-282390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282527-282642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:283448-283619:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284810-284938:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:286696-286790:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288067-288235:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:288478-288629:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:292435-292549:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:293392-293643:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:293882-294002:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:296277-296469:1:exon

GJA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317688..323413)
location: region:317688-323413:-1
so has part: feature:317688-323413:-1:exon
subclass of: SO_0000010

119941496
type: Gene
SIO_000068: ncbigene

position:317688:-1
position: 317688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323413:-1
position: 323413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317688-323413:-1:exon

GJA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJA3
product: gap junction protein alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761961.1
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(join(317688..319173,323239..323413))
location: region:317688-323413:-1
so has part: feature:323239-323413:-1:exon
so has part: feature:317688-319173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323239-323413:-1:exon

position:323239:-1
position: 323239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317688-319173:-1:exon

position:319173:-1
position: 319173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein
translation: MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFMCNTQQPGCENVCYDEAFPISHIRFWVLQIIFVSTPSLIYLGHVLHIVRMEEKKKEKEEELLKKADLRAGAGGQGIPRSPREPLLGREAAGGGEERLPVRDEWGKVRIAGALLRTYVFNIVFKTLFEVGFIVGQYFLYGFELKPLYRCSRWPCPNTVDCFISRPTEKTIFIVFMLAVACVSLLLNILEIYHLGWKKFKQGMTNHYSPNSPKAQPGLARLGQLSPFLLPSHAPPPPTLTIGFPPFYSQSSSSLGQATPSGYPGAPEPPAEFKMAGLPKERSRAASAQAFSSNQHILTAEQNWANQEAEQQTLEQKSPAAPGTPPSPSSPQQNPPEVGGRGEGSEAPLLLVNGGSLGGGSGGEAEAREEWPGTTRVEIHESPLLLLDLRRLSKASKASSCRARSDDLAI
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(317777..319156)
location: region:317777-319156:-1
so has part: feature:317777-319156:-1:exon

XP_038617889.1
type: Protein
SIO_000068: ncbiprotein

position:317777:-1
position: 317777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319156:-1
position: 319156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317777-319156:-1:exon

GJB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(340481..347697)
location: region:340481-347697:-1
so has part: feature:340481-347697:-1:exon
subclass of: SO_0000010

119941483
type: Gene
SIO_000068: ncbigene

position:340481:-1
position: 340481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347697:-1
position: 347697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340481-347697:-1:exon

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB2
product: gap junction protein beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761949.1
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(340481..341469,347676..347697))
location: region:340481-347697:-1
so has part: feature:347676-347697:-1:exon
so has part: feature:340481-341469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347676-347697:-1:exon

position:347676:-1
position: 347676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340481-341469:-1:exon

position:341469:-1
position: 341469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein
translation: MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFICNTLQPGCKNVCYDHVFPISHIRLWALQLIFVSTPALLVAMHIAYRRHEKKRKFIRGETKNEFKDIEEIKRQKVRIEGALWWTYTSSIFFRAIFEAVFMYVFYFMYNGFSMTRVVKCNAWPCPNTVDCFVSRPTEKTVFTVFMISVSGICILLNIVELCYLMIRYCSGKSKKPV
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(340768..341448)
location: region:340768-341448:-1
so has part: feature:340768-341448:-1:exon

XP_038617877.1
type: Protein
SIO_000068: ncbiprotein

position:340768:-1
position: 340768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341448:-1
position: 341448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340768-341448:-1:exon

GJB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(361243..368779)
location: region:361243-368779:-1
so has part: feature:361243-368779:-1:exon
subclass of: SO_0000010

119941556
type: Gene
SIO_000068: ncbigene

position:361243:-1
position: 361243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368779:-1
position: 368779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361243-368779:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB6
product: gap junction protein beta 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038762067.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(361243..362577,368485..368779))
location: region:361243-368779:-1
so has part: feature:368485-368779:-1:exon
so has part: feature:361243-362577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368485-368779:-1:exon

position:368485:-1
position: 368485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361243-362577:-1:exon

position:362577:-1
position: 362577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB6
product: gap junction protein beta 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038762064.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(361243..362577,368257..368389))
location: region:361243-368389:-1
so has part: feature:368257-368389:-1:exon
so has part: feature:361243-362577:-1:exon

position:368389:-1
position: 368389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368257-368389:-1:exon

position:368257:-1
position: 368257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361243-362577:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB6
product: gap junction protein beta 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762065.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(361243..362577,367661..367851))
location: region:361243-367851:-1
so has part: feature:367661-367851:-1:exon
so has part: feature:361243-362577:-1:exon

position:367851:-1
position: 367851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367661-367851:-1:exon

position:367661:-1
position: 367661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361243-362577:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB6
product: gap junction protein beta 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038762066.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(361243..362577,367198..367477))
location: region:361243-367477:-1
so has part: feature:367198-367477:-1:exon
so has part: feature:361243-362577:-1:exon

position:367477:-1
position: 367477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367198-367477:-1:exon

position:367198:-1
position: 367198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361243-362577:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWSTLHTFIGGVNKYSTSIGKIWITVLFIFRVMILVVAAEEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYSRHEKARKFRRGEKKSEFKDIEEIKRQKVRIEGALWWTYTSSIFFRILFEASFMYVFYFLYNGYNLPWVLKCSADPCPNVVDCFISRPTEKTVFTIFMVSASVICMLLNVAELCYLLMKVCFRQSKRAQAQRSHSGPPTKEAKQNEMNELIAEGASNAIPGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(361767..362552)
location: region:361767-362552:-1
so has part: feature:361767-362552:-1:exon

XP_038617992.1
type: Protein
SIO_000068: ncbiprotein

position:361767:-1
position: 361767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362552:-1
position: 362552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361767-362552:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWSTLHTFIGGVNKYSTSIGKIWITVLFIFRVMILVVAAEEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYSRHEKARKFRRGEKKSEFKDIEEIKRQKVRIEGALWWTYTSSIFFRILFEASFMYVFYFLYNGYNLPWVLKCSADPCPNVVDCFISRPTEKTVFTIFMVSASVICMLLNVAELCYLLMKVCFRQSKRAQAQRSHSGPPTKEAKQNEMNELIAEGASNAIPGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(361767..362552)
location: region:361767-362552:-1
so has part: feature:361767-362552:-1:exon

XP_038617993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361767-362552:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWSTLHTFIGGVNKYSTSIGKIWITVLFIFRVMILVVAAEEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYSRHEKARKFRRGEKKSEFKDIEEIKRQKVRIEGALWWTYTSSIFFRILFEASFMYVFYFLYNGYNLPWVLKCSADPCPNVVDCFISRPTEKTVFTIFMVSASVICMLLNVAELCYLLMKVCFRQSKRAQAQRSHSGPPTKEAKQNEMNELIAEGASNAIPGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(361767..362552)
location: region:361767-362552:-1
so has part: feature:361767-362552:-1:exon

XP_038617994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361767-362552:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWSTLHTFIGGVNKYSTSIGKIWITVLFIFRVMILVVAAEEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYSRHEKARKFRRGEKKSEFKDIEEIKRQKVRIEGALWWTYTSSIFFRILFEASFMYVFYFLYNGYNLPWVLKCSADPCPNVVDCFISRPTEKTVFTIFMVSASVICMLLNVAELCYLLMKVCFRQSKRAQAQRSHSGPPTKEAKQNEMNELIAEGASNAIPGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(361767..362552)
location: region:361767-362552:-1
so has part: feature:361767-362552:-1:exon

XP_038617995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361767-362552:-1:exon

CRYL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(395319..452683)
location: region:395319-452683:-1
so has part: feature:395319-452683:-1:exon
subclass of: SO_0000010

119941564
type: Gene
SIO_000068: ncbigene

position:395319:-1
position: 395319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452683:-1
position: 452683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395319-452683:-1:exon

CRYL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CRYL1
product: crystallin lambda 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038762077.1
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(395319..396326,396893..396999,399283..399388,411255..411449,415715..415876,439761..439887,446283..446390,452506..452683))
location: region:395319-452683:-1
so has part: feature:452506-452683:-1:exon
so has part: feature:446283-446390:-1:exon
so has part: feature:439761-439887:-1:exon
so has part: feature:415715-415876:-1:exon
so has part: feature:411255-411449:-1:exon
so has part: feature:399283-399388:-1:exon
so has part: feature:396893-396999:-1:exon
so has part: feature:395319-396326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452506-452683:-1:exon

position:452506:-1
position: 452506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446283-446390:-1:exon

position:446283:-1
position: 446283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446390:-1
position: 446390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439761-439887:-1:exon

position:439761:-1
position: 439761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439887:-1
position: 439887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415715-415876:-1:exon

position:415715:-1
position: 415715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415876:-1
position: 415876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411255-411449:-1:exon

position:411255:-1
position: 411255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411449:-1
position: 411449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:399283-399388:-1:exon

position:399283:-1
position: 399283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399388:-1
position: 399388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:396893-396999:-1:exon

position:396893:-1
position: 396893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396999:-1
position: 396999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:395319-396326:-1:exon

position:396326:-1
position: 396326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lambda-crystallin homolog
translation: MTSTQDDSVVIFGSGLIGRSWAMLFASGGFKVKLYDIGQQQITTALESIGKQMQELERRGMLKGSLSAQEQLSLISGGSDIEAAVEGAIHIQECIPENLDLKKKVFAQLDLVVDDNIIISSSSSCLLPSKMFTGLKHVKQCIVAHPVNPPYHIPLVELVPHPKTAPSTVERTHALMRRIGQSPVRIAREIDGFVLNRLQYAIIGEAWRLVEEGIVSPSDLDTVMSHGLGMRYAFLGPLETMHLNAQGMLSYCEQYSEGMKHVLKTFGPVPEFSGETVQKIHQALCENTPADPEHLDARRQWRDECLMELAKLKAKRQTQ
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(396213..396326,396893..396999,399283..399388,411255..411449,415715..415876,439761..439887,446283..446390,452506..452546))
location: region:396213-452546:-1
so has part: feature:452506-452546:-1:exon
so has part: feature:446283-446390:-1:exon
so has part: feature:439761-439887:-1:exon
so has part: feature:415715-415876:-1:exon
so has part: feature:411255-411449:-1:exon
so has part: feature:399283-399388:-1:exon
so has part: feature:396893-396999:-1:exon
so has part: feature:396213-396326:-1:exon

XP_038618005.1
type: Protein
SIO_000068: ncbiprotein

position:396213:-1
position: 396213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452546:-1
position: 452546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452506-452546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446283-446390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439761-439887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415715-415876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411255-411449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399283-399388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396893-396999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396213-396326:-1:exon

IFT88
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 464391..508388
location: region:464391-508388:1
so has part: feature:464391-508388:1:exon
subclass of: SO_0000010

119941380
type: Gene
SIO_000068: ncbigene

position:464391:1
position: 464391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508388:1
position: 508388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464391-508388:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761792.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464391..464463,464721..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464391-508388:1
so has part: feature:464391-464463:1:exon
so has part: feature:464721-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464391-464463:1:exon

position:464463:1
position: 464463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464721-464840:1:exon

position:464721:1
position: 464721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464840:1
position: 464840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:470156-470218:1:exon

position:470156:1
position: 470156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470218:1
position: 470218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471914-471970:1:exon

position:471914:1
position: 471914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471970:1
position: 471970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472839-472895:1:exon

position:472839:1
position: 472839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472895:1
position: 472895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473701-473764:1:exon

position:473701:1
position: 473701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473764:1
position: 473764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474241-474310:1:exon

position:474241:1
position: 474241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474310:1
position: 474310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:474761-474851:1:exon

position:474761:1
position: 474761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474851:1
position: 474851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:476701-476805:1:exon

position:476701:1
position: 476701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476805:1
position: 476805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:478174-478276:1:exon

position:478174:1
position: 478174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478276:1
position: 478276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479204-479318:1:exon

position:479204:1
position: 479204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479318:1
position: 479318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:480067-480298:1:exon

position:480067:1
position: 480067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480298:1
position: 480298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:481922-481992:1:exon

position:481922:1
position: 481922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481992:1
position: 481992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:482936-483022:1:exon

position:482936:1
position: 482936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483022:1
position: 483022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:487512-487611:1:exon

position:487512:1
position: 487512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487611:1
position: 487611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:488213-488221:1:exon

position:488213:1
position: 488213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488221:1
position: 488221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:490695-490781:1:exon

position:490695:1
position: 490695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490781:1
position: 490781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:491455-491641:1:exon

position:491455:1
position: 491455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491641:1
position: 491641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:492661-492769:1:exon

position:492661:1
position: 492661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492769:1
position: 492769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:494170-494320:1:exon

position:494170:1
position: 494170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494320:1
position: 494320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:496222-496337:1:exon

position:496222:1
position: 496222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496337:1
position: 496337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:498033-498085:1:exon

position:498033:1
position: 498033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498085:1
position: 498085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:499370-499435:1:exon

position:499370:1
position: 499370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499435:1
position: 499435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:500548-500654:1:exon

position:500548:1
position: 500548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500654:1
position: 500654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:504429-504489:1:exon

position:504429:1
position: 504429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504489:1
position: 504489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:507739-507849:1:exon

position:507739:1
position: 507739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507849:1
position: 507849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:508144-508388:1:exon

position:508144:1
position: 508144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761797.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464443..464463,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464443-508388:1
so has part: feature:464443-464463:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508388:1:exon

position:464443:1
position: 464443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464443-464463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471914-471970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508144-508388:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038761791.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464654..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464654-508388:1
so has part: feature:464654-464840:1:exon
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position:464654:1
position: 464654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761793.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464654..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464654-508388:1
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IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761794.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464654..464840,470156..470218,471914..471970,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464654-508388:1
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urn:…
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IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761795.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
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location: region:464654-508388:1
so has part: feature:464654-464840:1:exon
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IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IFT88
product: intraflagellar transport 88, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038761796.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464654..464840,470156..470218,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508388)
location: region:464654-508388:1
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IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X1
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAAVRPLATGFASKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617719.1
type: Protein
SIO_000068: ncbiprotein

position:464751:1
position: 464751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508265:1
position: 508265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471914-471970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X1
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAAVRPLATGFASKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471914-471970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X2
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAAVRPLATGFASKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,471914..471970,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471914-471970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X3
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAAVRPLATGFADGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,471914..471970,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:471914-471970:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471914-471970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X4
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPSKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X5
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPSKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(464751..464840,470156..470218,472839..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:464751-508265:1
so has part: feature:464751-464840:1:exon
so has part: feature:470156-470218:1:exon
so has part: feature:472839-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464751-464840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470156-470218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472839-472895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:508144-508265:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X6
translation: MGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADLAVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(472866..472895,473701..473764,474241..474310,474761..474851,476701..476805,478174..478276,479204..479318,480067..480298,481922..481992,482936..483022,487512..487611,488213..488221,490695..490781,491455..491641,492661..492769,494170..494320,496222..496337,498033..498085,499370..499435,500548..500654,504429..504489,507739..507849,508144..508265)
location: region:472866-508265:1
so has part: feature:472866-472895:1:exon
so has part: feature:473701-473764:1:exon
so has part: feature:474241-474310:1:exon
so has part: feature:474761-474851:1:exon
so has part: feature:476701-476805:1:exon
so has part: feature:478174-478276:1:exon
so has part: feature:479204-479318:1:exon
so has part: feature:480067-480298:1:exon
so has part: feature:481922-481992:1:exon
so has part: feature:482936-483022:1:exon
so has part: feature:487512-487611:1:exon
so has part: feature:488213-488221:1:exon
so has part: feature:490695-490781:1:exon
so has part: feature:491455-491641:1:exon
so has part: feature:492661-492769:1:exon
so has part: feature:494170-494320:1:exon
so has part: feature:496222-496337:1:exon
so has part: feature:498033-498085:1:exon
so has part: feature:499370-499435:1:exon
so has part: feature:500548-500654:1:exon
so has part: feature:504429-504489:1:exon
so has part: feature:507739-507849:1:exon
so has part: feature:508144-508265:1:exon

XP_038617725.1
type: Protein
SIO_000068: ncbiprotein

position:472866:1
position: 472866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472866-472895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473701-473764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474241-474310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474761-474851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476701-476805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478174-478276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479204-479318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480067-480298:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481922-481992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482936-483022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487512-487611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488213-488221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490695-490781:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491455-491641:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492661-492769:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:494170-494320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:496222-496337:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:498033-498085:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:499370-499435:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500548-500654:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:504429-504489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:507739-507849:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:508144-508265:1:exon

IL17D
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508469..518069
location: region:508469-518069:1
so has part: feature:508469-518069:1:exon
subclass of: SO_0000010

119941381
type: Gene
SIO_000068: ncbigene

position:508469:1
position: 508469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518069:1
position: 518069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508469-518069:1:exon

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IL17D
product: interleukin 17D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761798.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(508469..508804,510366..510431,512844..513006,513121..513410,517227..518069)
location: region:508469-518069:1
so has part: feature:508469-508804:1:exon
so has part: feature:510366-510431:1:exon
so has part: feature:512844-513006:1:exon
so has part: feature:513121-513410:1:exon
so has part: feature:517227-518069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508469-508804:1:exon

position:508804:1
position: 508804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510366-510431:1:exon

position:510366:1
position: 510366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510431:1
position: 510431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512844-513006:1:exon

position:512844:1
position: 512844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513006:1
position: 513006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513121-513410:1:exon

position:513121:1
position: 513121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513410:1
position: 513410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:517227-518069:1:exon

position:517227:1
position: 517227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IL17D
product: interleukin 17D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761799.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(508469..508804,512841..513006,513121..513410,517227..518069)
location: region:508469-518069:1
so has part: feature:508469-508804:1:exon
so has part: feature:512841-513006:1:exon
so has part: feature:513121-513410:1:exon
so has part: feature:517227-518069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508469-508804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512841-513006:1:exon

position:512841:1
position: 512841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513121-513410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517227-518069:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X1
translation: MPPLQRKLLSFTRYRSLELSPAVEGPNLAPSQQPSSVSVRPRWSRGWSGGGGGQRGPGAFSGAEGQHGRPGRGPGRRPARLGSPMAGTQVWAVSVTVAVAVSVWVSPCPGRAAPGPRRPSRACPDRAEEQLEQLYGRLAAGLLAAFHHTLQPPPGAQTPNATCPAGPHGGHRLPLNLRTISPWAYRISHEPSRYPRYLPEAYCLCRGCLTGLSGEEEDLRFRSTPVYVPTVVLRRTAACAGGRAVYVEDYITVPVGCTCVPEPAKGAGSLDSSPNQPALKQLGSQRDQPAAT
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(508767..508804,510366..510431,512844..513006,513121..513410,517227..517548)
location: region:508767-517548:1
so has part: feature:508767-508804:1:exon
so has part: feature:510366-510431:1:exon
so has part: feature:512844-513006:1:exon
so has part: feature:513121-513410:1:exon
so has part: feature:517227-517548:1:exon

XP_038617726.1
type: Protein
SIO_000068: ncbiprotein

position:508767:1
position: 508767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517548:1
position: 517548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508767-508804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510366-510431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512844-513006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513121-513410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517227-517548:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X2
translation: MPPLQRKLLSFTSSSVSVRPRWSRGWSGGGGGQRGPGAFSGAEGQHGRPGRGPGRRPARLGSPMAGTQVWAVSVTVAVAVSVWVSPCPGRAAPGPRRPSRACPDRAEEQLEQLYGRLAAGLLAAFHHTLQPPPGAQTPNATCPAGPHGGHRLPLNLRTISPWAYRISHEPSRYPRYLPEAYCLCRGCLTGLSGEEEDLRFRSTPVYVPTVVLRRTAACAGGRAVYVEDYITVPVGCTCVPEPAKGAGSLDSSPNQPALKQLGSQRDQPAAT
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(508767..508804,512841..513006,513121..513410,517227..517548)
location: region:508767-517548:1
so has part: feature:508767-508804:1:exon
so has part: feature:512841-513006:1:exon
so has part: feature:513121-513410:1:exon
so has part: feature:517227-517548:1:exon

XP_038617727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508767-508804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512841-513006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513121-513410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517227-517548:1:exon

EEF1AKMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519092..527821)
location: region:519092-527821:-1
so has part: feature:519092-527821:-1:exon
subclass of: SO_0000010

119941383
type: Gene
SIO_000068: ncbigene

position:519092:-1
position: 519092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527821:-1
position: 527821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519092-527821:-1:exon

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761800.1
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(519092..520962,521812..522092,524944..525026,527115..527821))
location: region:519092-527821:-1
so has part: feature:527115-527821:-1:exon
so has part: feature:524944-525026:-1:exon
so has part: feature:521812-522092:-1:exon
so has part: feature:519092-520962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527115-527821:-1:exon

position:527115:-1
position: 527115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524944-525026:-1:exon

position:524944:-1
position: 524944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525026:-1
position: 525026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521812-522092:-1:exon

position:521812:-1
position: 521812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522092:-1
position: 522092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519092-520962:-1:exon

position:520962:-1
position: 520962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1
translation: MTDSEDDDVPQLSAYALAALQEFYTERQQRQPGPDGDKKFSVGVIEEDWQLSQFWYSDETASRLAAEAISAAGKGGRIACVSAPSVYQKLRELSGENFSAYLLEYDRRFAIYGEEFVFYDYNSPLNLPESMTAHSFDIVVADPPYLSEECLRKTAETVKYLTRGKILLCTGAVMEEAAAKHLGVKMCHFVPRHTRNLANEFRCYANYASGLECD
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(520829..520962,521812..522092,524944..525026,527115..527261))
location: region:520829-527261:-1
so has part: feature:527115-527261:-1:exon
so has part: feature:524944-525026:-1:exon
so has part: feature:521812-522092:-1:exon
so has part: feature:520829-520962:-1:exon

XP_038617728.1
type: Protein
SIO_000068: ncbiprotein

position:520829:-1
position: 520829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527261:-1
position: 527261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527115-527261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524944-525026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521812-522092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520829-520962:-1:exon

XPO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538861..599846)
location: region:538861-599846:-1
so has part: feature:538861-599846:-1:exon
subclass of: SO_0000010

119941522
type: Gene
SIO_000068: ncbigene

position:538861:-1
position: 538861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599846:-1
position: 599846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538861-599846:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: XPO4
product: exportin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762003.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(538861..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..582012,587294..587399,599760..599846))
location: region:538861-599846:-1
so has part: feature:599760-599846:-1:exon
so has part: feature:587294-587399:-1:exon
so has part: feature:581871-582012:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:538861-539965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599760-599846:-1:exon

position:599760:-1
position: 599760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587294-587399:-1:exon

position:587294:-1
position: 587294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587399:-1
position: 587399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581871-582012:-1:exon

position:581871:-1
position: 581871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582012:-1
position: 582012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577465-577603:-1:exon

position:577465:-1
position: 577465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577603:-1
position: 577603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572976-573092:-1:exon

position:572976:-1
position: 572976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573092:-1
position: 573092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:572122-572275:-1:exon

position:572122:-1
position: 572122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572275:-1
position: 572275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:564926-565038:-1:exon

position:564926:-1
position: 564926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565038:-1
position: 565038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:561985-562142:-1:exon

position:561985:-1
position: 561985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562142:-1
position: 562142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:561576-561750:-1:exon

position:561576:-1
position: 561576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561750:-1
position: 561750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:556054-556230:-1:exon

position:556054:-1
position: 556054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556230:-1
position: 556230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555148-555290:-1:exon

position:555148:-1
position: 555148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555290:-1
position: 555290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:554482-554627:-1:exon

position:554482:-1
position: 554482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554627:-1
position: 554627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:553279-553456:-1:exon

position:553279:-1
position: 553279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553456:-1
position: 553456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:552630-552789:-1:exon

position:552630:-1
position: 552630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552789:-1
position: 552789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:550228-550397:-1:exon

position:550228:-1
position: 550228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550397:-1
position: 550397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:549032-549206:-1:exon

position:549032:-1
position: 549032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549206:-1
position: 549206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:547766-548059:-1:exon

position:547766:-1
position: 547766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548059:-1
position: 548059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:546091-546271:-1:exon

position:546091:-1
position: 546091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546271:-1
position: 546271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:545003-545121:-1:exon

position:545003:-1
position: 545003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545121:-1
position: 545121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:542755-542885:-1:exon

position:542755:-1
position: 542755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542885:-1
position: 542885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:541505-541622:-1:exon

position:541505:-1
position: 541505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541622:-1
position: 541622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:540769-540861:-1:exon

position:540769:-1
position: 540769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540861:-1
position: 540861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:538861-539965:-1:exon

position:539965:-1
position: 539965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: XPO4
product: exportin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762004.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(538861..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..582012,587294..587399,590562..590647))
location: region:538861-590647:-1
so has part: feature:590562-590647:-1:exon
so has part: feature:587294-587399:-1:exon
so has part: feature:581871-582012:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:538861-539965:-1:exon

position:590647:-1
position: 590647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590562-590647:-1:exon

position:590562:-1
position: 590562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587294-587399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581871-582012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577465-577603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572976-573092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572122-572275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564926-565038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561985-562142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561576-561750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556054-556230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555148-555290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:554482-554627:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553279-553456:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:552630-552789:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:550228-550397:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:549032-549206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:547766-548059:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546091-546271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545003-545121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542755-542885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:541505-541622:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:540769-540861:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:538861-539965:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: XPO4
product: exportin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762005.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(538861..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..582012,582122..582184))
location: region:538861-582184:-1
so has part: feature:582122-582184:-1:exon
so has part: feature:581871-582012:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:538861-539965:-1:exon

position:582184:-1
position: 582184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582122-582184:-1:exon

position:582122:-1
position: 582122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581871-582012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577465-577603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572976-573092:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572122-572275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564926-565038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561985-562142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561576-561750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:556054-556230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555148-555290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:554482-554627:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553279-553456:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:552630-552789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:550228-550397:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:549032-549206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:547766-548059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:546091-546271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:545003-545121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:542755-542885:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:541505-541622:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:540769-540861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:538861-539965:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X1
translation: MMAAAAAAAAVLGAPEVIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFVLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAIPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSASIDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(539768..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..582012,587294..587399,599760..599846))
location: region:539768-599846:-1
so has part: feature:599760-599846:-1:exon
so has part: feature:587294-587399:-1:exon
so has part: feature:581871-582012:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:539768-539965:-1:exon

XP_038617931.1
type: Protein
SIO_000068: ncbiprotein

position:539768:-1
position: 539768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599760-599846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587294-587399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581871-582012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577465-577603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572976-573092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572122-572275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564926-565038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561985-562142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561576-561750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556054-556230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555148-555290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:554482-554627:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553279-553456:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:552630-552789:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:550228-550397:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:549032-549206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:547766-548059:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546091-546271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545003-545121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542755-542885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:541505-541622:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:540769-540861:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539768-539965:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X2
translation: MGRHLSGVFWAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFVLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAIPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSASIDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(539768..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..582012,587294..587399,590562..590591))
location: region:539768-590591:-1
so has part: feature:590562-590591:-1:exon
so has part: feature:587294-587399:-1:exon
so has part: feature:581871-582012:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:539768-539965:-1:exon

XP_038617932.1
type: Protein
SIO_000068: ncbiprotein

position:590591:-1
position: 590591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590562-590591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587294-587399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581871-582012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577465-577603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572976-573092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572122-572275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564926-565038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561985-562142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561576-561750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556054-556230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555148-555290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:554482-554627:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553279-553456:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:552630-552789:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:550228-550397:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:549032-549206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:547766-548059:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546091-546271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545003-545121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542755-542885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:541505-541622:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:540769-540861:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539768-539965:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X3
translation: MEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFVLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAIPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSASIDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(539768..539965,540769..540861,541505..541622,542755..542885,545003..545121,546091..546271,547766..548059,549032..549206,550228..550397,552630..552789,553279..553456,554482..554627,555148..555290,556054..556230,561576..561750,561985..562142,564926..565038,572122..572275,572976..573092,577465..577603,581871..581965))
location: region:539768-581965:-1
so has part: feature:581871-581965:-1:exon
so has part: feature:577465-577603:-1:exon
so has part: feature:572976-573092:-1:exon
so has part: feature:572122-572275:-1:exon
so has part: feature:564926-565038:-1:exon
so has part: feature:561985-562142:-1:exon
so has part: feature:561576-561750:-1:exon
so has part: feature:556054-556230:-1:exon
so has part: feature:555148-555290:-1:exon
so has part: feature:554482-554627:-1:exon
so has part: feature:553279-553456:-1:exon
so has part: feature:552630-552789:-1:exon
so has part: feature:550228-550397:-1:exon
so has part: feature:549032-549206:-1:exon
so has part: feature:547766-548059:-1:exon
so has part: feature:546091-546271:-1:exon
so has part: feature:545003-545121:-1:exon
so has part: feature:542755-542885:-1:exon
so has part: feature:541505-541622:-1:exon
so has part: feature:540769-540861:-1:exon
so has part: feature:539768-539965:-1:exon

XP_038617933.1
type: Protein
SIO_000068: ncbiprotein

position:581965:-1
position: 581965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581871-581965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577465-577603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572976-573092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572122-572275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564926-565038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561985-562142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561576-561750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556054-556230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555148-555290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554482-554627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:553279-553456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552630-552789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:550228-550397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:549032-549206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:547766-548059:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:546091-546271:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:545003-545121:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:542755-542885:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:541505-541622:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:540769-540861:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:539768-539965:-1:exon

LATS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605592..630505)
location: region:605592-630505:-1
so has part: feature:605592-630505:-1:exon
subclass of: SO_0000010

119941244
type: Gene
SIO_000068: ncbigene

position:605592:-1
position: 605592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630505:-1
position: 630505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605592-630505:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LATS2
product: large tumor suppressor kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761619.1
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(605592..608161,609366..609472,609962..610144,610982..611564,613304..614829,617080..617212,622541..623095,630399..630505))
location: region:605592-630505:-1
so has part: feature:630399-630505:-1:exon
so has part: feature:622541-623095:-1:exon
so has part: feature:617080-617212:-1:exon
so has part: feature:613304-614829:-1:exon
so has part: feature:610982-611564:-1:exon
so has part: feature:609962-610144:-1:exon
so has part: feature:609366-609472:-1:exon
so has part: feature:605592-608161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630399-630505:-1:exon

position:630399:-1
position: 630399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622541-623095:-1:exon

position:622541:-1
position: 622541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623095:-1
position: 623095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617080-617212:-1:exon

position:617080:-1
position: 617080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617212:-1
position: 617212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613304-614829:-1:exon

position:613304:-1
position: 613304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614829:-1
position: 614829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610982-611564:-1:exon

position:610982:-1
position: 610982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611564:-1
position: 611564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:609962-610144:-1:exon

position:609962:-1
position: 609962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610144:-1
position: 610144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:609366-609472:-1:exon

position:609366:-1
position: 609366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609472:-1
position: 609472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:605592-608161:-1:exon

position:608161:-1
position: 608161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQHIREGLKQPPKPAGPGVPAGSLSDPSLASKSLGGKDTARQQQQQQQQLRPTAKFGPYQKALREIRYSLLPFANESGSSAAPDVNRQMLQELVNAGCDQEMAMRALKQTGSRGIEAALEFISKMGYLDPRNEQIVRVIKQTSPGKGAVPNPVARRPSFEAANESFPPYHQHGSAVYDRGGFGVDSASLLGDGPRQYVDYLLAPPQRLPGVGPHGAAGGHPHQPKAYPASLEPPLINYPVGGHGGQPLPLPAPHGSGSVHYGRPLLVVPGETLGYGVQRSPSFQSKMPPPPLQEGGYGNLPSKGPGVPGGPGHAFQQAAGTVPGMGAGGLYGSHPHHKQTSPSAHPVHVMGGRGPAFPSDFAESPPASLLSPSRNSLNLDGYELGGAGGPAWPPSTLSRRDSLQSPGLEASPRQHVGLRPDGPGPSRTNSFNGHQPASVSLRAGAPGKNDPALSSPNTITAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWLPAQAPGAEGLEAMEPHAPPLSGPGTYPLDADFGAQELRWPPPPYPKHLRLPNNAEPLDVDGLCAGVEQSLRGVPGPAEDSGDRGSKSAKGDKAGKDKKQIQTSPVPVRKSGRDEEKRESRIKTYSPFAFKFYMEQHVENVLKTYQQKVHRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKESLYFVMDYIPGGDMMSLLIRLEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGRHARQDSMEPSGLWDDASNCRCGDRLKTLEQRAEKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPAQVQLSPEASDLITKLCCAAEARLGGNGADDIKAHPFFGAMDFSGDLRRQPAPYVPKVSHPMDTSNFDPVDEEGPWDDASGDSTRAWDTLAAANSKHPEHAFYEFTFRRFFDDNGYPFRCPKPLGGEATPPEDLDPNPRENARAVGEPAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(607655..608161,609366..609472,609962..610144,610982..611564,613304..614829,617080..617212,622541..622894))
location: region:607655-622894:-1
so has part: feature:622541-622894:-1:exon
so has part: feature:617080-617212:-1:exon
so has part: feature:613304-614829:-1:exon
so has part: feature:610982-611564:-1:exon
so has part: feature:609962-610144:-1:exon
so has part: feature:609366-609472:-1:exon
so has part: feature:607655-608161:-1:exon

XP_038617547.1
type: Protein
SIO_000068: ncbiprotein

position:607655:-1
position: 607655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622894:-1
position: 622894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622541-622894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617080-617212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613304-614829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610982-611564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609962-610144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609366-609472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607655-608161:-1:exon

SKA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(648637..670168)
location: region:648637-670168:-1
so has part: feature:648637-670168:-1:exon
subclass of: SO_0000010

119941460
type: Gene
SIO_000068: ncbigene

position:648637:-1
position: 648637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670168:-1
position: 670168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648637-670168:-1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761910.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(648637..648775,662284..662405,662616..662822,664115..664299,664457..664587,666089..666506,667191..667356,668284..668348,670023..670168))
location: region:648637-670168:-1
so has part: feature:670023-670168:-1:exon
so has part: feature:668284-668348:-1:exon
so has part: feature:667191-667356:-1:exon
so has part: feature:666089-666506:-1:exon
so has part: feature:664457-664587:-1:exon
so has part: feature:664115-664299:-1:exon
so has part: feature:662616-662822:-1:exon
so has part: feature:662284-662405:-1:exon
so has part: feature:648637-648775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670023-670168:-1:exon

position:670023:-1
position: 670023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668284-668348:-1:exon

position:668284:-1
position: 668284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668348:-1
position: 668348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667191-667356:-1:exon

position:667191:-1
position: 667191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667356:-1
position: 667356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666089-666506:-1:exon

position:666089:-1
position: 666089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666506:-1
position: 666506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664457-664587:-1:exon

position:664457:-1
position: 664457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664587:-1
position: 664587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:664115-664299:-1:exon

position:664115:-1
position: 664115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664299:-1
position: 664299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662616-662822:-1:exon

position:662616:-1
position: 662616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662822:-1
position: 662822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:662284-662405:-1:exon

position:662284:-1
position: 662284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662405:-1
position: 662405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648637-648775:-1:exon

position:648775:-1
position: 648775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X1
translation: MDVIGSFYGKLRALGLTLERETARLERALGGHDADFEEESPMRLLHDMHSEVRALKGDVQTLLEKSHSERQGSYDFIKTTKLLRQRNTMDIVKLRELFQNYGYKPPASENSGKEVAADAPGPPGTGPESEGVEDPPGSATATTTQPLGPTAPGDPARCPQLSDFGLGRYVLPNAWDRHPQAQNLYDRKTRMASPPFQASPGRVLKTPKCALKMDDCECMTPKLEHFGISEHTMCLNNDYTMVLKKAEKTKSFSKGGPGGPENKTAAAASGAEVIASSSDVPTVPGPAIQVLEENNADGAHSPLAPVFCTPGIKIPSVSIDVIASDFPKAKESGFPNCAGTPPPPDFETTCLKEESEGKVTRTPSKTDIWPNSVYLGNPASLALRSDRCLEQDRKSSPPPITASENLLLSTPTPPEMTTIPDDILQILSRYNPNLATPVAIKATPRTDALSTLKREIMQPGYNKENRRIHRWTRLRLNHVSFEAEKMVSSLPKTRIKAEIRQ
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(648667..648775,662284..662405,662616..662822,664115..664299,664457..664587,666089..666506,667191..667356,668284..668348,670023..670125))
location: region:648667-670125:-1
so has part: feature:670023-670125:-1:exon
so has part: feature:668284-668348:-1:exon
so has part: feature:667191-667356:-1:exon
so has part: feature:666089-666506:-1:exon
so has part: feature:664457-664587:-1:exon
so has part: feature:664115-664299:-1:exon
so has part: feature:662616-662822:-1:exon
so has part: feature:662284-662405:-1:exon
so has part: feature:648667-648775:-1:exon

XP_038617838.1
type: Protein
SIO_000068: ncbiprotein

position:648667:-1
position: 648667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670125:-1
position: 670125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670023-670125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668284-668348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667191-667356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666089-666506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664457-664587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664115-664299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662616-662822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662284-662405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648667-648775:-1:exon

SAP18
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 654173..660844
location: region:654173-660844:1
so has part: feature:654173-660844:1:exon
subclass of: SO_0000010

119941461
type: Gene
SIO_000068: ncbigene

position:654173:1
position: 654173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660844:1
position: 660844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654173-660844:1:exon

SAP18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SAP18
product: Sin3A associated protein 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761912.1
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(654173..654311,657026..657135,658876..658998,660410..660844)
location: region:654173-660844:1
so has part: feature:654173-654311:1:exon
so has part: feature:657026-657135:1:exon
so has part: feature:658876-658998:1:exon
so has part: feature:660410-660844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654173-654311:1:exon

position:654311:1
position: 654311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657026-657135:1:exon

position:657026:1
position: 657026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657135:1
position: 657135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658876-658998:1:exon

position:658876:1
position: 658876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658998:1
position: 658998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660410-660844:1:exon

position:660410:1
position: 660410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP18
translation: MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(654240..654311,657026..657135,658876..658998,660410..660566)
location: region:654240-660566:1
so has part: feature:654240-654311:1:exon
so has part: feature:657026-657135:1:exon
so has part: feature:658876-658998:1:exon
so has part: feature:660410-660566:1:exon

XP_038617840.1
type: Protein
SIO_000068: ncbiprotein

position:654240:1
position: 654240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660566:1
position: 660566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654240-654311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657026-657135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658876-658998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660410-660566:1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761911.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(661710..661963,662284..662405,662616..662822,664115..664299,664457..664587,666089..666506,667191..667356,668284..668348,670023..670168))
location: region:661710-670168:-1
so has part: feature:670023-670168:-1:exon
so has part: feature:668284-668348:-1:exon
so has part: feature:667191-667356:-1:exon
so has part: feature:666089-666506:-1:exon
so has part: feature:664457-664587:-1:exon
so has part: feature:664115-664299:-1:exon
so has part: feature:662616-662822:-1:exon
so has part: feature:662284-662405:-1:exon
so has part: feature:661710-661963:-1:exon

position:661710:-1
position: 661710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670023-670168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668284-668348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667191-667356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666089-666506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664457-664587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664115-664299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662616-662822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662284-662405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:661710-661963:-1:exon

position:661963:-1
position: 661963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X2
translation: MDVIGSFYGKLRALGLTLERETARLERALGGHDADFEEESPMRLLHDMHSEVRALKGDVQTLLEKSHSERQGSYDFIKTTKLLRQRNTMDIVKLRELFQNYGYKPPASENSGKEVAADAPGPPGTGPESEGVEDPPGSATATTTQPLGPTAPGDPARCPQLSDFGLGRYVLPNAWDRHPQAQNLYDRKTRMASPPFQASPGRVLKTPKCALKMDDCECMTPKLEHFGISEHTMCLNNDYTMVLKKAEKTKSFSKGGPGGPENKTAAAASGAEVIASSSDVPTVPGPAIQVLEENNADGAHSPLAPVFCTPGIKIPSVSIDVIASDFPKAKESGFPNCAGTPPPPDFETTCLKEESEGKVTRTPSKTDIWPNSVYLGNPASLALRSDRCLEQDRKSSPPPITASENLLLSTPTPPEMTTIPDDILQILSRYNPNLATPVAIKATPRTDALSTLKREIMQPGYNKENRSYY
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(661951..661963,662284..662405,662616..662822,664115..664299,664457..664587,666089..666506,667191..667356,668284..668348,670023..670125))
location: region:661951-670125:-1
so has part: feature:670023-670125:-1:exon
so has part: feature:668284-668348:-1:exon
so has part: feature:667191-667356:-1:exon
so has part: feature:666089-666506:-1:exon
so has part: feature:664457-664587:-1:exon
so has part: feature:664115-664299:-1:exon
so has part: feature:662616-662822:-1:exon
so has part: feature:662284-662405:-1:exon
so has part: feature:661951-661963:-1:exon

XP_038617839.1
type: Protein
SIO_000068: ncbiprotein

position:661951:-1
position: 661951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670023-670125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668284-668348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667191-667356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666089-666506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664457-664587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664115-664299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662616-662822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662284-662405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:661951-661963:-1:exon

MRPL57
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 670029..674249
location: region:670029-674249:1
so has part: feature:670029-674249:1:exon
subclass of: SO_0000010

119941462
type: Gene
SIO_000068: ncbigene

position:670029:1
position: 670029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674249:1
position: 674249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670029-674249:1:exon

MRPL57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MRPL57
product: mitochondrial ribosomal protein L57, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761913.1
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: join(670029..670142,673809..674249)
location: region:670029-674249:1
so has part: feature:670029-670142:1:exon
so has part: feature:673809-674249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670029-670142:1:exon

position:670142:1
position: 670142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673809-674249:1:exon

position:673809:1
position: 673809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MRPL57
product: mitochondrial ribosomal protein L57, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761914.1
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: join(670060..670141,673786..674249)
location: region:670060-674249:1
so has part: feature:670060-670141:1:exon
so has part: feature:673786-674249:1:exon

position:670060:1
position: 670060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670060-670141:1:exon

position:670141:1
position: 670141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673786-674249:1:exon

position:673786:1
position: 673786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein 63, mitochondrial
translation: MFLSAILRHNRIPGKQWIGKHRRPRFVSAGMKQRLVRRLEMEAENEYWLGRPYMSREQEHGHAAARKREAFEALKAAKAAKFPPHRFVADQLDHLNVTKKWTGS
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 673811..674125
location: region:673811-674125:1
so has part: feature:673811-674125:1:exon

XP_038617841.1
type: Protein
SIO_000068: ncbiprotein

position:673811:1
position: 673811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674125:1
position: 674125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673811-674125:1:exon

MRPL57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein 63, mitochondrial
translation: MFLSAILRHNRIPGKQWIGKHRRPRFVSAGMKQRLVRRLEMEAENEYWLGRPYMSREQEHGHAAARKREAFEALKAAKAAKFPPHRFVADQLDHLNVTKKWTGS
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 673811..674125
location: region:673811-674125:1
so has part: feature:673811-674125:1:exon

XP_038617842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673811-674125:1:exon

ZDHHC20
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(679802..726681)
location: region:679802-726681:-1
so has part: feature:679802-726681:-1:exon
subclass of: SO_0000010

119941231
type: Gene
SIO_000068: ncbigene

position:679802:-1
position: 679802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726681:-1
position: 726681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679802-726681:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761593.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726681))
location: region:679802-726681:-1
so has part: feature:726529-726681:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:679802-682168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726681:-1:exon

position:726529:-1
position: 726529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

position:705198:-1
position: 705198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705224:-1
position: 705224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

position:700211:-1
position: 700211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700314:-1
position: 700314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

position:697331:-1
position: 697331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697451:-1
position: 697451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

position:696041:-1
position: 696041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696110:-1
position: 696110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

position:695028:-1
position: 695028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695060:-1
position: 695060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

position:694657:-1
position: 694657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694777:-1
position: 694777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

position:689979:-1
position: 689979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690014:-1
position: 690014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

position:689052:-1
position: 689052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689184:-1
position: 689184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

position:687904:-1
position: 687904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688030:-1
position: 688030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

position:685435:-1
position: 685435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685524:-1
position: 685524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:679802-682168:-1:exon

position:682168:-1
position: 682168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761592.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726680))
location: region:679802-726680:-1
so has part: feature:726529-726680:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

position:726680:-1
position: 726680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682911-682988:-1:exon

position:682911:-1
position: 682911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682988:-1
position: 682988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761589.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726680))
location: region:679802-726680:-1
so has part: feature:726529-726680:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:684034-684149:-1:exon

position:684034:-1
position: 684034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684149:-1
position: 684149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:682911-682988:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761590.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,684034..684149,685435..685524,687904..688030,689052..689184,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726676))
location: region:679802-726676:-1
so has part: feature:726529-726676:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

position:726676:-1
position: 726676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682911-682988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761595.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,705198..705224,726529..726646))
location: region:679802-726646:-1
so has part: feature:726529-726646:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

position:726646:-1
position: 726646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682911-682988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761594.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,705198..705224,719616..719783,726529..726615))
location: region:679802-726615:-1
so has part: feature:726529-726615:-1:exon
so has part: feature:719616-719783:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

position:726615:-1
position: 726615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719616-719783:-1:exon

position:719616:-1
position: 719616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719783:-1
position: 719783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682911-682988:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761591.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(679802..682168,682911..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,719616..719783,726529..726615))
location: region:679802-726615:-1
so has part: feature:726529-726615:-1:exon
so has part: feature:719616-719783:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682911-682988:-1:exon
so has part: feature:679802-682168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719616-719783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:682911-682988:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:679802-682168:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X5
translation: MAPWPAVRCCQRSLGWVPVLFIALVVGWSYYAYVVELCLFTIIFTGEKGKAIVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKRFILHICA
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682144..682168,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726646))
location: region:682144-726646:-1
so has part: feature:726529-726646:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:682144-682168:-1:exon

XP_038617521.1
type: Protein
SIO_000068: ncbiprotein

position:682144:-1
position: 682144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682144-682168:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X4
translation: MAPWPAVRCCQRSLGWVPVLFIALVVGWSYYAYVVELCLFTIIFTGEKGKAIVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKRDKEPCYSFNRKLISVY
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682937..682988,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726646))
location: region:682937-726646:-1
so has part: feature:726529-726646:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:682937-682988:-1:exon

XP_038617520.1
type: Protein
SIO_000068: ncbiprotein

position:682937:-1
position: 682937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682937-682988:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X2
translation: MAPWPAVRCCQRSLGWVPVLFIALVVGWSYYAYVVELCLFTIIFTGEKGKAIVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSGIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682951..682988,684034..684149,685435..685524,687904..688030,689052..689184,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726646))
location: region:682951-726646:-1
so has part: feature:726529-726646:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682951-682988:-1:exon

XP_038617518.1
type: Protein
SIO_000068: ncbiprotein

position:682951:-1
position: 682951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682951-682988:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X1
translation: MAPWPAVRCCQRSLGWVPVLFIALVVGWSYYAYVVELCLFTIIFTGEKGKAIVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSGIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682951..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,726529..726646))
location: region:682951-726646:-1
so has part: feature:726529-726646:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682951-682988:-1:exon

XP_038617517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682951-682988:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X7
translation: MWWSCASLLLSSRGKRFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSGIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682951..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,705198..705224,726529..726549))
location: region:682951-726549:-1
so has part: feature:726529-726549:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682951-682988:-1:exon

XP_038617523.1
type: Protein
SIO_000068: ncbiprotein

position:726549:-1
position: 726549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726529-726549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682951-682988:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X6
translation: MEFICTFLCAQSPVLNPWLLLSSRGKRFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSGIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682951..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,705198..705224,719616..719669))
location: region:682951-719669:-1
so has part: feature:719616-719669:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682951-682988:-1:exon

XP_038617522.1
type: Protein
SIO_000068: ncbiprotein

position:719669:-1
position: 719669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719616-719669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682951-682988:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X3
translation: MHVFVCTEPCTEPLVTIIFTGEKGKAIVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSGIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(682951..682988,684034..684149,685435..685524,687904..688030,689052..689184,689979..690014,694657..694777,695028..695060,696041..696110,697331..697451,700211..700314,705198..705224,719616..719658))
location: region:682951-719658:-1
so has part: feature:719616-719658:-1:exon
so has part: feature:705198-705224:-1:exon
so has part: feature:700211-700314:-1:exon
so has part: feature:697331-697451:-1:exon
so has part: feature:696041-696110:-1:exon
so has part: feature:695028-695060:-1:exon
so has part: feature:694657-694777:-1:exon
so has part: feature:689979-690014:-1:exon
so has part: feature:689052-689184:-1:exon
so has part: feature:687904-688030:-1:exon
so has part: feature:685435-685524:-1:exon
so has part: feature:684034-684149:-1:exon
so has part: feature:682951-682988:-1:exon

XP_038617519.1
type: Protein
SIO_000068: ncbiprotein

position:719658:-1
position: 719658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719616-719658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705198-705224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700211-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697331-697451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696041-696110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695028-695060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694657-694777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689979-690014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689052-689184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687904-688030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685435-685524:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:684034-684149:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682951-682988:-1:exon

LOC119941612
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(726736..729195)
location: region:726736-729195:-1
so has part: feature:726736-729195:-1:exon
subclass of: SO_0000010

119941612
type: Gene
SIO_000068: ncbigene

position:726736:-1
position: 726736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729195:-1
position: 729195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726736-729195:-1:exon

LOC119941612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941612
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038762151.1
SIO_010081: LOC119941612
subclass of: SO_0000673
so part of: LOC119941612
location: complement(join(726736..726879,726979..727090,727183..727304,727557..727662,727781..727908,728094..728144,728260..728325,728565..728718,728999..729064,729155..729195))
location: region:726736-729195:-1
so has part: feature:729155-729195:-1:exon
so has part: feature:728999-729064:-1:exon
so has part: feature:728565-728718:-1:exon
so has part: feature:728260-728325:-1:exon
so has part: feature:728094-728144:-1:exon
so has part: feature:727781-727908:-1:exon
so has part: feature:727557-727662:-1:exon
so has part: feature:727183-727304:-1:exon
so has part: feature:726979-727090:-1:exon
so has part: feature:726736-726879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729155-729195:-1:exon

position:729155:-1
position: 729155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728999-729064:-1:exon

position:728999:-1
position: 728999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729064:-1
position: 729064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728565-728718:-1:exon

position:728565:-1
position: 728565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728718:-1
position: 728718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728260-728325:-1:exon

position:728260:-1
position: 728260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728325:-1
position: 728325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728094-728144:-1:exon

position:728094:-1
position: 728094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728144:-1
position: 728144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727781-727908:-1:exon

position:727781:-1
position: 727781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727908:-1
position: 727908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:727557-727662:-1:exon

position:727557:-1
position: 727557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727662:-1
position: 727662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:727183-727304:-1:exon

position:727183:-1
position: 727183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727304:-1
position: 727304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:726979-727090:-1:exon

position:726979:-1
position: 726979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727090:-1
position: 727090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:726736-726879:-1:exon

position:726879:-1
position: 726879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119941612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MPLPLMRSPTPGPRPRPWREVQAQVPPPDVRPPPLTARTRPWREVQAQAPPPVLGPARDVRSHPCRQAPPPDVRLRPLALGPALRREAPPPGARSRLRPRPLTLGPAPDAPPLTSGPSGDVRPLPLAPAVRQAPPPDVRLRPLTRGPAPGARSKIGPRPLPLGPAPDVRLRPLVRDPALWRLVLAQAPPPDTRPHRWRQAPPLDALPPGARARPWREVQAQCPPPALGPARDVRTHAVVRPLPLTQAPLTLDSAPCREAPPPAPGPRPDVRPPAVTSAPPPDRPRAPARDVRPPPPDVRPLPLARGAAPGPAPRARRAGTGRRPRGGGA
SIO_010081: LOC119941612
subclass of: SO_0000673
so part of: LOC119941612
location: complement(join(726736..726879,726979..727090,727183..727304,727557..727662,727781..727908,728094..728144,728260..728325,728565..728718,728999..729064,729155..729195))
location: region:726736-729195:-1
so has part: feature:729155-729195:-1:exon
so has part: feature:728999-729064:-1:exon
so has part: feature:728565-728718:-1:exon
so has part: feature:728260-728325:-1:exon
so has part: feature:728094-728144:-1:exon
so has part: feature:727781-727908:-1:exon
so has part: feature:727557-727662:-1:exon
so has part: feature:727183-727304:-1:exon
so has part: feature:726979-727090:-1:exon
so has part: feature:726736-726879:-1:exon

XP_038618079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:729155-729195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728999-729064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728565-728718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728260-728325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728094-728144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727781-727908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727557-727662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727183-727304:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726979-727090:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726736-726879:-1:exon

MICU2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747777..839526)
location: region:747777-839526:-1
so has part: feature:747777-839526:-1:exon
subclass of: SO_0000010

119941613
type: Gene
SIO_000068: ncbigene

position:747777:-1
position: 747777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839526:-1
position: 839526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747777-839526:-1:exon

MICU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MICU2
product: mitochondrial calcium uptake 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038762152.1
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(747777..748672,749810..749967,751827..751935,752389..752557,763487..763584,772999..773064,777465..777547,778773..778820,782106..782181,782273..782304,796331..796475,839326..839526))
location: region:747777-839526:-1
so has part: feature:839326-839526:-1:exon
so has part: feature:796331-796475:-1:exon
so has part: feature:782273-782304:-1:exon
so has part: feature:782106-782181:-1:exon
so has part: feature:778773-778820:-1:exon
so has part: feature:777465-777547:-1:exon
so has part: feature:772999-773064:-1:exon
so has part: feature:763487-763584:-1:exon
so has part: feature:752389-752557:-1:exon
so has part: feature:751827-751935:-1:exon
so has part: feature:749810-749967:-1:exon
so has part: feature:747777-748672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839326-839526:-1:exon

position:839326:-1
position: 839326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796331-796475:-1:exon

position:796331:-1
position: 796331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796475:-1
position: 796475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782273-782304:-1:exon

position:782273:-1
position: 782273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782304:-1
position: 782304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782106-782181:-1:exon

position:782106:-1
position: 782106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782181:-1
position: 782181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778773-778820:-1:exon

position:778773:-1
position: 778773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778820:-1
position: 778820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777465-777547:-1:exon

position:777465:-1
position: 777465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777547:-1
position: 777547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:772999-773064:-1:exon

position:772999:-1
position: 772999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773064:-1
position: 773064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:763487-763584:-1:exon

position:763487:-1
position: 763487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763584:-1
position: 763584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:752389-752557:-1:exon

position:752389:-1
position: 752389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752557:-1
position: 752557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:751827-751935:-1:exon

position:751827:-1
position: 751827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751935:-1
position: 751935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:749810-749967:-1:exon

position:749810:-1
position: 749810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749967:-1
position: 749967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:747777-748672:-1:exon

position:748672:-1
position: 748672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial
translation: MAAAVAARGAAMAARCGSGRRWRAAMAAAAMAGGGAAAAAWWRGYRGRAPPGPDLRTPAALLTVLAQKDPAKEELSDKVSIRKQRFLQFSSQEYEGEYYMTPRDFLFSVMFDQIDRKALVRRLSQKEVEGALAFAKRARRGSNFFRDLGDKGLISYTEYLFLLTILTRPQTGFHMAFKMLDSDGDERVDKREFFKLQQIIRRQEDLKAAARDESMLMESKMEDSEVNTTLQIHFFGAKGEDKLHYREFHRFMENLQTEVQEMEFIQFSKGLSFMRKEDFAEWLLFFTTGNKDIYWQNVKERMPAGESISLHEFKTFCQFTTHLEDFSITMQMFSIANRPVKLAEFKRAVKVATGHELSDNVLDTVFKIFDLDGDDCLSHGEFLGVLKNRMHRGLWVPQEPGLQEYWKCVKRESIKGVKEVWKQAGKPLL
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(748568..748672,749810..749967,751827..751935,752389..752557,763487..763584,772999..773064,777465..777547,778773..778820,782106..782181,782273..782304,796331..796475,839326..839526))
location: region:748568-839526:-1
so has part: feature:839326-839526:-1:exon
so has part: feature:796331-796475:-1:exon
so has part: feature:782273-782304:-1:exon
so has part: feature:782106-782181:-1:exon
so has part: feature:778773-778820:-1:exon
so has part: feature:777465-777547:-1:exon
so has part: feature:772999-773064:-1:exon
so has part: feature:763487-763584:-1:exon
so has part: feature:752389-752557:-1:exon
so has part: feature:751827-751935:-1:exon
so has part: feature:749810-749967:-1:exon
so has part: feature:748568-748672:-1:exon

XP_038618080.1
type: Protein
SIO_000068: ncbiprotein

position:748568:-1
position: 748568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839326-839526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796331-796475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782273-782304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782106-782181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778773-778820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777465-777547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772999-773064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763487-763584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752389-752557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751827-751935:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:749810-749967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748568-748672:-1:exon

FGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 876707..906260
location: region:876707-906260:1
so has part: feature:876707-906260:1:exon
subclass of: SO_0000010

119941443
type: Gene
SIO_000068: ncbigene

position:876707:1
position: 876707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906260:1
position: 906260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876707-906260:1:exon

FGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FGF9
product: fibroblast growth factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761888.1
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(876707..877187,893974..894077,905011..906260)
location: region:876707-906260:1
so has part: feature:876707-877187:1:exon
so has part: feature:893974-894077:1:exon
so has part: feature:905011-906260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876707-877187:1:exon

position:877187:1
position: 877187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893974-894077:1:exon

position:893974:1
position: 893974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894077:1
position: 894077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905011-906260:1:exon

position:905011:1
position: 905011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9
translation: MAPLGEVGNYFGVQDAAPFGNVPVLPADSPGLLRDHLGPAEAGALPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNERGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPEKVPELYKDILSQS
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(876911..877187,893974..894077,905011..905256)
location: region:876911-905256:1
so has part: feature:876911-877187:1:exon
so has part: feature:893974-894077:1:exon
so has part: feature:905011-905256:1:exon

XP_038617816.1
type: Protein
SIO_000068: ncbiprotein

position:876911:1
position: 876911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905256:1
position: 905256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876911-877187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893974-894077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905011-905256:1:exon

LOC119941215
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(957726..964498)
location: region:957726-964498:-1
so has part: feature:957726-964498:-1:exon
subclass of: SO_0000011

119941215
type: Gene
SIO_000068: ncbigene

position:957726:-1
position: 957726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964498:-1
position: 964498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957726-964498:-1:exon

LOC119941215
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119941215
product: uncharacterized LOC119941215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005455198.1
SIO_010081: LOC119941215
subclass of: SO_0000673
so part of: LOC119941215
location: complement(join(957726..957923,964309..964498))
location: region:957726-964498:-1
so has part: feature:964309-964498:-1:exon
so has part: feature:957726-957923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:964309-964498:-1:exon

position:964309:-1
position: 964309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957726-957923:-1:exon

position:957923:-1
position: 957923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGCG
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1208429..1251739
location: region:1208429-1251739:1
so has part: feature:1208429-1251739:1:exon
subclass of: SO_0000010

119941546
type: Gene
SIO_000068: ncbigene

position:1208429:1
position: 1208429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251739:1
position: 1251739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208429-1251739:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SGCG
product: sarcoglycan gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762051.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1208429..1208491,1230120..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251739)
location: region:1208429-1251739:1
so has part: feature:1208429-1208491:1:exon
so has part: feature:1230120-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1208429-1208491:1:exon

position:1208491:1
position: 1208491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1230120-1230317:1:exon

position:1230120:1
position: 1230120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230317:1
position: 1230317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

position:1237413:1
position: 1237413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237514:1
position: 1237514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

position:1240085:1
position: 1240085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240172:1
position: 1240172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

position:1241439:1
position: 1241439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241558:1
position: 1241558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

position:1243834:1
position: 1243834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243906:1
position: 1243906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

position:1248825:1
position: 1248825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248948:1
position: 1248948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1251001-1251739:1:exon

position:1251001:1
position: 1251001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SGCG
product: sarcoglycan gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762049.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209167..1209286,1230120..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251739)
location: region:1209167-1251739:1
so has part: feature:1209167-1209286:1:exon
so has part: feature:1230120-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251739:1:exon

position:1209167:1
position: 1209167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209167-1209286:1:exon

position:1209286:1
position: 1209286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1230120-1230317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251001-1251739:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SGCG
product: sarcoglycan gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762050.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209167..1209286,1230123..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251739)
location: region:1209167-1251739:1
so has part: feature:1209167-1209286:1:exon
so has part: feature:1230123-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209167-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230123-1230317:1:exon

position:1230123:1
position: 1230123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251001-1251739:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SGCG
product: sarcoglycan gamma, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762053.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209167..1209286,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251739)
location: region:1209167-1251739:1
so has part: feature:1209167-1209286:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209167-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251001-1251739:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SGCG
product: sarcoglycan gamma, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762052.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209167..1209286,1230120..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251042..1251317)
location: region:1209167-1251317:1
so has part: feature:1209167-1209286:1:exon
so has part: feature:1230120-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251042-1251317:1:exon

position:1251317:1
position: 1251317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209167-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230120-1230317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251042-1251317:1:exon

position:1251042:1
position: 1251042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X1
translation: MPGWTSPSYSRRSWTHTPAGPFQQMVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSEGMLLLPSPHCTTLPSRSCSMRKPCVCPSWSRGRRADLAARRDSMRSALVPTEGFTCPPPGWVPLARSTVGSASKAPACSAGRQGCPSFPLPVSFTLPRPLVISQQNINVHLPSPL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209218..1209286,1230120..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251342)
location: region:1209218-1251342:1
so has part: feature:1209218-1209286:1:exon
so has part: feature:1230120-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251342:1:exon

XP_038617977.1
type: Protein
SIO_000068: ncbiprotein

position:1209218:1
position: 1209218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251342:1
position: 1251342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209218-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230120-1230317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251001-1251342:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X2
translation: MPGWTSPSYSRRSWTHTPAGPFQMVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSEGMLLLPSPHCTTLPSRSCSMRKPCVCPSWSRGRRADLAARRDSMRSALVPTEGFTCPPPGWVPLARSTVGSASKAPACSAGRQGCPSFPLPVSFTLPRPLVISQQNINVHLPSPL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209218..1209286,1230123..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251342)
location: region:1209218-1251342:1
so has part: feature:1209218-1209286:1:exon
so has part: feature:1230123-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251342:1:exon

XP_038617978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1209218-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230123-1230317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251001-1251342:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X5
translation: MPGWTSPSYSRRSWTHTPAGPFQTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSEGMLLLPSPHCTTLPSRSCSMRKPCVCPSWSRGRRADLAARRDSMRSALVPTEGFTCPPPGWVPLARSTVGSASKAPACSAGRQGCPSFPLPVSFTLPRPLVISQQNINVHLPSPL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209218..1209286,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251342)
location: region:1209218-1251342:1
so has part: feature:1209218-1209286:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251342:1:exon

XP_038617981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1209218-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251001-1251342:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X4
translation: MPGWTSPSYSRRSWTHTPAGPFQQMVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSEGMVVLDAETVCLPKLVQGTTGGPGSPQRLYEICACPDGRLYLSAAGVGSTCQEYSRVCQ
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1209218..1209286,1230120..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251042..1251215)
location: region:1209218-1251215:1
so has part: feature:1209218-1209286:1:exon
so has part: feature:1230120-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251042-1251215:1:exon

XP_038617980.1
type: Protein
SIO_000068: ncbiprotein

position:1251215:1
position: 1251215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209218-1209286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230120-1230317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251042-1251215:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X3
translation: MVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSEGMLLLPSPHCTTLPSRSCSMRKPCVCPSWSRGRRADLAARRDSMRSALVPTEGFTCPPPGWVPLARSTVGSASKAPACSAGRQGCPSFPLPVSFTLPRPLVISQQNINVHLPSPL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1230123..1230317,1237413..1237514,1240085..1240172,1241439..1241558,1243834..1243906,1248825..1248948,1251001..1251342)
location: region:1230123-1251342:1
so has part: feature:1230123-1230317:1:exon
so has part: feature:1237413-1237514:1:exon
so has part: feature:1240085-1240172:1:exon
so has part: feature:1241439-1241558:1:exon
so has part: feature:1243834-1243906:1:exon
so has part: feature:1248825-1248948:1:exon
so has part: feature:1251001-1251342:1:exon

XP_038617979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230123-1230317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237413-1237514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240085-1240172:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241439-1241558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243834-1243906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248825-1248948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251001-1251342:1:exon

SACS
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1256296..1284640)
location: region:1256296-1284640:-1
so has part: feature:1256296-1284640:-1:exon
subclass of: SO_0000010

119941545
type: Gene
SIO_000068: ncbigene

position:1256296:-1
position: 1256296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284640:-1
position: 1284640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256296-1284640:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SACS
product: sacsin molecular chaperone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038762048.1
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1256296..1269419,1272417..1272508,1273432..1274914,1276679..1276825,1277133..1277244,1278106..1278191,1280098..1280188,1284499..1284640))
location: region:1256296-1284640:-1
so has part: feature:1284499-1284640:-1:exon
so has part: feature:1280098-1280188:-1:exon
so has part: feature:1278106-1278191:-1:exon
so has part: feature:1277133-1277244:-1:exon
so has part: feature:1276679-1276825:-1:exon
so has part: feature:1273432-1274914:-1:exon
so has part: feature:1272417-1272508:-1:exon
so has part: feature:1256296-1269419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1284499-1284640:-1:exon

position:1284499:-1
position: 1284499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1280098-1280188:-1:exon

position:1280098:-1
position: 1280098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280188:-1
position: 1280188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1278106-1278191:-1:exon

position:1278106:-1
position: 1278106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278191:-1
position: 1278191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277133-1277244:-1:exon

position:1277133:-1
position: 1277133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277244:-1
position: 1277244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276679-1276825:-1:exon

position:1276679:-1
position: 1276679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276825:-1
position: 1276825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1273432-1274914:-1:exon

position:1273432:-1
position: 1273432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274914:-1
position: 1274914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1272417-1272508:-1:exon

position:1272417:-1
position: 1272417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272508:-1
position: 1272508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1256296-1269419:-1:exon

position:1269419:-1
position: 1269419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin
translation: MEQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGILDPHQVLFGPQESGQCWNLKADSKEINELADQFSPFIGIFGSTKETFKKGSFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLHVREADGTERLVFRVTASENKGLKHERPNSIKILGTAISNYCKKVPSNSITCVTYHINIALEDESTKDAQKTSWLVCNSVGGRGICNELDCLADDLKFIPTIGIAMPLSSSEEEKGAASDFSGKAFCFLPLPPGEESQTGLPVHISGFFGLTDNRRSIKWRELDQWRDPSAVWNELLVTHVVPRVYATLILDSVKRLETERNSDFPWSVEVIYKLWPDLNKVRVHWQPVLEPLFKELFQHAVLYSAGKHWVKLEQAYFSELDDSLESTKAVLNYLQSSGKQVVRVPANVASALQLAACGAKPVKKVTPALVRQVLRKSGPAGGADEKIHLLEFVLSDETYSELLGLELLPLQNGSFIPFSSSVAEQDAVYITSEDYPRSLFPGLEGRLILDDLKPQVLASLKEAAQTRGRPCTQLQLLNQERFARLIKEVMNALWPGRDLVVPWYPLAEDRDHPPIAWLKMIWKNLYIHFSEDLTLFDEMPLIPKTPLEEGQTFVELIRLRIPSSVILDDDSEAQLPEFLADIVQKLGGIVLQKLDASIQHPLLKKYVHTPLPSALLQIMERTSLQKLCNQVASLLPTHKDALRRFLASLTNIDEKERRIIQELTIFKKMNHSSDQGNSCFTRLKGGKVLHPTAKLPPGLRLSTLVIDSTDEATFRLVNMLKVEQLKSTNCLRFILKDIENAFYTQEETTKLMLWILENLSSLKNENSSVIEWLVPLKFIPISQEKVVAASELFDPDVEVLRDLFYAEEDKCFPPTVFTSSSDILHSLRQIGLKHEAGLKEKDIIQVAHKIEDLQGCSSPNHDALLRKAKTLLLVLNRNHSLVQLPETKTTLKKIQWVPACKERPPNYPGSLVWKGDLCNLCSPPEMADVAHAILVGSSIPLVEGVHANLKKALGISTEPGIAAVLKHFKVVVDWHSSKTFSDEDYYQFQHVLLEIYGFMHDHLDEGKDAFKALQFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKIYLKSDRELSDEESKQNLHLMLNIIRWLYSSQIPASLSTPVPIHYSKNPAKLIMKPIHECCYCDIKVDDLNDLLEDAVEPIILVHEDIPMKTAEWLNVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECNFMIDMRRNMDIRESLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHLSKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYRGTLFRLSFRTQQEAKLSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQNVNSMHLKYLKIEETNPALAQDTVIIKKTLCSSKALTAPTVSVLKEAAKLMKTGGVGGGSGRKISSDPPKSACVLQITVEEFHHVFRRIADLQSPLFRGPEDDPATFFEIAKAGQAKRPADELPQKTVDSTTWLLCTCMDAGEAFKFSLNESGRRLGLVPCGAVGVLLSETQDQKWSVKSHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTVFMRHVIVKAYLEALGVLRDMAVNGELQDYTYYAVWPDPDSVHDDFSIVCQGFYEDIAHGRGKEGTKVFSDGSTWVSMKNVRFLDDCLLQRPAIGPAAFKIFLKYLKKTGSKNLCAVELPSSVKSGFEAAGCKQILLENTFSERQFFSEVFFPNIREIDAKLRDPLMHFVLNEKVEEFSGILRGTPCIPSSLEGHPLALPSRLIHPEGRVAKLYDIKDGRFPYGSAQDYLNPIVL…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1257853..1269419,1272417..1272508,1273432..1274914,1276679..1276825,1277133..1277148))
location: region:1257853-1277148:-1
so has part: feature:1277133-1277148:-1:exon
so has part: feature:1276679-1276825:-1:exon
so has part: feature:1273432-1274914:-1:exon
so has part: feature:1272417-1272508:-1:exon
so has part: feature:1257853-1269419:-1:exon

XP_038617976.1
type: Protein
SIO_000068: ncbiprotein

position:1257853:-1
position: 1257853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277148:-1
position: 1277148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277133-1277148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1276679-1276825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273432-1274914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272417-1272508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1257853-1269419:-1:exon

TNFRSF19
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1346333..1412276
location: region:1346333-1412276:1
so has part: feature:1346333-1412276:1:exon
subclass of: SO_0000010

119941566
type: Gene
SIO_000068: ncbigene

position:1346333:1
position: 1346333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412276:1
position: 1412276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346333-1412276:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038762079.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1346333..1346421,1363965..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1412276)
location: region:1346333-1412276:1
so has part: feature:1346333-1346421:1:exon
so has part: feature:1363965-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1412276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1346333-1346421:1:exon

position:1346421:1
position: 1346421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363965-1364066:1:exon

position:1363965:1
position: 1363965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364066:1
position: 1364066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1365967-1366080:1:exon

position:1365967:1
position: 1365967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366080:1
position: 1366080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1373432-1373610:1:exon

position:1373432:1
position: 1373432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373610:1
position: 1373610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1376089-1376174:1:exon

position:1376089:1
position: 1376089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376174:1
position: 1376174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1398626-1398790:1:exon

position:1398626:1
position: 1398626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398790:1
position: 1398790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1400725-1400850:1:exon

position:1400725:1
position: 1400725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400850:1
position: 1400850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1407355-1407457:1:exon

position:1407355:1
position: 1407355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407457:1
position: 1407457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1409012-1409408:1:exon

position:1409012:1
position: 1409012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409408:1
position: 1409408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1411744-1412276:1:exon

position:1411744:1
position: 1411744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762078.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1346369..1346421,1356701..1356874,1363965..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1412276)
location: region:1346369-1412276:1
so has part: feature:1346369-1346421:1:exon
so has part: feature:1356701-1356874:1:exon
so has part: feature:1363965-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1412276:1:exon

position:1346369:1
position: 1346369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346369-1346421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1356701-1356874:1:exon

position:1356701:1
position: 1356701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356874:1
position: 1356874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1363965-1364066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365967-1366080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373432-1373610:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1376089-1376174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1398626-1398790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400725-1400850:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1407355-1407457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1409012-1409408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1411744-1412276:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762080.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1346520..1346550,1363965..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1412276)
location: region:1346520-1412276:1
so has part: feature:1346520-1346550:1:exon
so has part: feature:1363965-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1412276:1:exon

position:1346520:1
position: 1346520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346520-1346550:1:exon

position:1346550:1
position: 1346550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363965-1364066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365967-1366080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1373432-1373610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1376089-1376174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398626-1398790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1400725-1400850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407355-1407457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1409012-1409408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1411744-1412276:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAEGLKKQEKKLLTLLFLLAHLPWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAHCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDAALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSARFQDVQYNGSELSCFDRPALGEFAHGACRQCQRAPVQTCRPVHLIPSLCCEETCSLDPSPRSCAFHPKSSLHERNTSSIGEMIPTFFGSIARSTCGDLSDAWPLVPTTPLDSDTLSLSDSELNGDGNSLDPERERSAPPDLSDGQDWEGAAAPAQTHYENLEEATEFSNHNVLMGQLLTQDTLSNKNQLGGETEAVIIIALPTSNQEA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1363998..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1411752)
location: region:1363998-1411752:1
so has part: feature:1363998-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1411752:1:exon

XP_038618006.1
type: Protein
SIO_000068: ncbiprotein

position:1363998:1
position: 1363998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411752:1
position: 1411752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363998-1364066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365967-1366080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373432-1373610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376089-1376174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398626-1398790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400725-1400850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1407355-1407457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409012-1409408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411744-1411752:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAEGLKKQEKKLLTLLFLLAHLPWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAHCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDAALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSARFQDVQYNGSELSCFDRPALGEFAHGACRQCQRAPVQTCRPVHLIPSLCCEETCSLDPSPRSCAFHPKSSLHERNTSSIGEMIPTFFGSIARSTCGDLSDAWPLVPTTPLDSDTLSLSDSELNGDGNSLDPERERSAPPDLSDGQDWEGAAAPAQTHYENLEEATEFSNHNVLMGQLLTQDTLSNKNQLGGETEAVIIIALPTSNQEA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1363998..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1411752)
location: region:1363998-1411752:1
so has part: feature:1363998-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1411752:1:exon

XP_038618007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1363998-1364066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365967-1366080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373432-1373610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376089-1376174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398626-1398790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400725-1400850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1407355-1407457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409012-1409408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411744-1411752:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAEGLKKQEKKLLTLLFLLAHLPWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAHCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDAALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSARFQDVQYNGSELSCFDRPALGEFAHGACRQCQRAPVQTCRPVHLIPSLCCEETCSLDPSPRSCAFHPKSSLHERNTSSIGEMIPTFFGSIARSTCGDLSDAWPLVPTTPLDSDTLSLSDSELNGDGNSLDPERERSAPPDLSDGQDWEGAAAPAQTHYENLEEATEFSNHNVLMGQLLTQDTLSNKNQLGGETEAVIIIALPTSNQEA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1363998..1364066,1365967..1366080,1373432..1373610,1376089..1376174,1398626..1398790,1400725..1400850,1407355..1407457,1409012..1409408,1411744..1411752)
location: region:1363998-1411752:1
so has part: feature:1363998-1364066:1:exon
so has part: feature:1365967-1366080:1:exon
so has part: feature:1373432-1373610:1:exon
so has part: feature:1376089-1376174:1:exon
so has part: feature:1398626-1398790:1:exon
so has part: feature:1400725-1400850:1:exon
so has part: feature:1407355-1407457:1:exon
so has part: feature:1409012-1409408:1:exon
so has part: feature:1411744-1411752:1:exon

XP_038618008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1363998-1364066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365967-1366080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373432-1373610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376089-1376174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398626-1398790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400725-1400850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1407355-1407457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409012-1409408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411744-1411752:1:exon

LOC119941409
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1418138..1512849)
location: region:1418138-1512849:-1
so has part: feature:1418138-1512849:-1:exon
subclass of: SO_0000010

119941409
type: Gene
SIO_000068: ncbigene

position:1418138:-1
position: 1418138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512849:-1
position: 1512849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418138-1512849:-1:exon

LOC119941409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941409
product: mitochondrial intermediate peptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761833.1
SIO_010081: LOC119941409
subclass of: SO_0000673
so part of: LOC119941409
location: complement(join(1418138..1418369,1440203..1440276,1444513..1444634,1461652..1461771,1463416..1463490,1471258..1471367,1472501..1472705,1475074..1475151,1476971..1477124,1488547..1488595,1492896..1493052,1494299..1494481,1498585..1498648,1499220..1499306,1500988..1501076,1503064..1503237,1512614..1512849))
location: region:1418138-1512849:-1
so has part: feature:1512614-1512849:-1:exon
so has part: feature:1503064-1503237:-1:exon
so has part: feature:1500988-1501076:-1:exon
so has part: feature:1499220-1499306:-1:exon
so has part: feature:1498585-1498648:-1:exon
so has part: feature:1494299-1494481:-1:exon
so has part: feature:1492896-1493052:-1:exon
so has part: feature:1488547-1488595:-1:exon
so has part: feature:1476971-1477124:-1:exon
so has part: feature:1475074-1475151:-1:exon
so has part: feature:1472501-1472705:-1:exon
so has part: feature:1471258-1471367:-1:exon
so has part: feature:1463416-1463490:-1:exon
so has part: feature:1461652-1461771:-1:exon
so has part: feature:1444513-1444634:-1:exon
so has part: feature:1440203-1440276:-1:exon
so has part: feature:1418138-1418369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1512614-1512849:-1:exon

position:1512614:-1
position: 1512614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503064-1503237:-1:exon

position:1503064:-1
position: 1503064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503237:-1
position: 1503237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1500988-1501076:-1:exon

position:1500988:-1
position: 1500988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501076:-1
position: 1501076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1499220-1499306:-1:exon

position:1499220:-1
position: 1499220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499306:-1
position: 1499306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498585-1498648:-1:exon

position:1498585:-1
position: 1498585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498648:-1
position: 1498648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1494299-1494481:-1:exon

position:1494299:-1
position: 1494299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494481:-1
position: 1494481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1492896-1493052:-1:exon

position:1492896:-1
position: 1492896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493052:-1
position: 1493052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1488547-1488595:-1:exon

position:1488547:-1
position: 1488547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488595:-1
position: 1488595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1476971-1477124:-1:exon

position:1476971:-1
position: 1476971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477124:-1
position: 1477124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1475074-1475151:-1:exon

position:1475074:-1
position: 1475074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1475151:-1
position: 1475151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1472501-1472705:-1:exon

position:1472501:-1
position: 1472501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472705:-1
position: 1472705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1471258-1471367:-1:exon

position:1471258:-1
position: 1471258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471367:-1
position: 1471367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1463416-1463490:-1:exon

position:1463416:-1
position: 1463416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463490:-1
position: 1463490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1461652-1461771:-1:exon

position:1461652:-1
position: 1461652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461771:-1
position: 1461771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1444513-1444634:-1:exon

position:1444513:-1
position: 1444513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444634:-1
position: 1444634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1440203-1440276:-1:exon

position:1440203:-1
position: 1440203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440276:-1
position: 1440276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1418138-1418369:-1:exon

position:1418369:-1
position: 1418369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119941409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941409
product: mitochondrial intermediate peptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761832.1
SIO_010081: LOC119941409
subclass of: SO_0000673
so part of: LOC119941409
location: complement(join(1418138..1418369,1440203..1440276,1444513..1444634,1461652..1461771,1463416..1463490,1471258..1471367,1472501..1472705,1475074..1475151,1476971..1477124,1486519..1486571,1487340..1487400,1488547..1488595,1492896..1493052,1494299..1494481,1498585..1498648,1499220..1499306,1500988..1501076,1503064..1503237,1512614..1512849))
location: region:1418138-1512849:-1
so has part: feature:1512614-1512849:-1:exon
so has part: feature:1503064-1503237:-1:exon
so has part: feature:1500988-1501076:-1:exon
so has part: feature:1499220-1499306:-1:exon
so has part: feature:1498585-1498648:-1:exon
so has part: feature:1494299-1494481:-1:exon
so has part: feature:1492896-1493052:-1:exon
so has part: feature:1488547-1488595:-1:exon
so has part: feature:1487340-1487400:-1:exon
so has part: feature:1486519-1486571:-1:exon
so has part: feature:1476971-1477124:-1:exon
so has part: feature:1475074-1475151:-1:exon
so has part: feature:1472501-1472705:-1:exon
so has part: feature:1471258-1471367:-1:exon
so has part: feature:1463416-1463490:-1:exon
so has part: feature:1461652-1461771:-1:exon
so has part: feature:1444513-1444634:-1:exon
so has part: feature:1440203-1440276:-1:exon
so has part: feature:1418138-1418369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1512614-1512849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503064-1503237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1500988-1501076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499220-1499306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498585-1498648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494299-1494481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492896-1493052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1488547-1488595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487340-1487400:-1:exon

position:1487340:-1
position: 1487340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487400:-1
position: 1487400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1486519-1486571:-1:exon

position:1486519:-1
position: 1486519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486571:-1
position: 1486571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1476971-1477124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1475074-1475151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472501-1472705:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471258-1471367:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1463416-1463490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1461652-1461771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1444513-1444634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1440203-1440276:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1418138-1418369:-1:exon

LOC119941409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase isoform X2
translation: MLGAGARWGLRLLGRAGRRRGGGGGGREGGRSRGGGARAVSTSWAPVGAAFNVRPQPPPADPGGPRRGLFGVPELSSPEGFHVAQEQALRESDCLVAKACAVPAGAQTVQIFDQLSDALCRVADLADFVKIAHPDPAFREAADEACRSIGTMVEKLNTNVELYQSLRKLLTDDKLAESLDPETRKVAELLMLDFEISGIHLDEEKRKRAVDLNVKILDLSSAFLMGTHLPNKIPKHLIPEPIRYNFEHDGDYAQVCSLHAESPDDLMREAAYKIFLHPHSGQLNCLEELLRSRDSLAQLVGYSTFAHRALQGTMAKSPEIVTQFLDKLSDKLSERYNIEPSLYCPFFSLGACMEGLNLLFNQLLGITLYAEQPAKGEVWCEDVRKLAVVHETEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLSLPHSTRNSPTLLTPGMMENLFHEMGHALHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFASDFRVVTQFAKHYQTGQPLPKPMVSRLCESKKVCAAADMQLQVFYAALDQIYHGKHPLKRSTTDILKETQEKCYGLPYVPNTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKRCFVRDPFNRAMGERYRREMLAHGGGREPLLMVQGMLEKCPSVEDFVEALVSDLDPDFETYFLDSE
SIO_010081: LOC119941409
subclass of: SO_0000673
so part of: LOC119941409
location: complement(join(1418272..1418369,1440203..1440276,1444513..1444634,1461652..1461771,1463416..1463490,1471258..1471367,1472501..1472705,1475074..1475151,1476971..1477124,1488547..1488595,1492896..1493052,1494299..1494481,1498585..1498648,1499220..1499306,1500988..1501076,1503064..1503237,1512614..1512814))
location: region:1418272-1512814:-1
so has part: feature:1512614-1512814:-1:exon
so has part: feature:1503064-1503237:-1:exon
so has part: feature:1500988-1501076:-1:exon
so has part: feature:1499220-1499306:-1:exon
so has part: feature:1498585-1498648:-1:exon
so has part: feature:1494299-1494481:-1:exon
so has part: feature:1492896-1493052:-1:exon
so has part: feature:1488547-1488595:-1:exon
so has part: feature:1476971-1477124:-1:exon
so has part: feature:1475074-1475151:-1:exon
so has part: feature:1472501-1472705:-1:exon
so has part: feature:1471258-1471367:-1:exon
so has part: feature:1463416-1463490:-1:exon
so has part: feature:1461652-1461771:-1:exon
so has part: feature:1444513-1444634:-1:exon
so has part: feature:1440203-1440276:-1:exon
so has part: feature:1418272-1418369:-1:exon

XP_038617761.1
type: Protein
SIO_000068: ncbiprotein

position:1418272:-1
position: 1418272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512814:-1
position: 1512814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512614-1512814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503064-1503237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1500988-1501076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499220-1499306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498585-1498648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494299-1494481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492896-1493052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1488547-1488595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476971-1477124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1475074-1475151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1472501-1472705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1471258-1471367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1463416-1463490:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1461652-1461771:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1444513-1444634:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440203-1440276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1418272-1418369:-1:exon

LOC119941409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase isoform X1
translation: MLGAGARWGLRLLGRAGRRRGGGGGGREGGRSRGGGARAVSTSWAPVGAAFNVRPQPPPADPGGPRRGLFGVPELSSPEGFHVAQEQALRESDCLVAKACAVPAGAQTVQIFDQLSDALCRVADLADFVKIAHPDPAFREAADEACRSIGTMVEKLNTNVELYQSLRKLLTDDKLAESLDPETRKVAELLMLDFEISGIHLDEEKRKRAVDLNVKILDLSSAFLMGTHLPNKIPKHLIPEPIRYNFEHDGDYAQVCSLHAESPDDLMREAAYKIFLHPHSGQLNCLEELLRSRDSLAQLVGYSTFAHRALQGTMAKSPEIVTQFLDKLSDKLSERAVKDFEMMRGMKMKLNPQNSELMPWDHPYYSGVLRAERYNIEPSLYCPFFSLGACMEGLNLLFNQLLGITLYAEQPAKGEVWCEDVRKLAVVHETEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLSLPHSTRNSPTLLTPGMMENLFHEMGHALHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFASDFRVVTQFAKHYQTGQPLPKPMVSRLCESKKVCAAADMQLQVFYAALDQIYHGKHPLKRSTTDILKETQEKCYGLPYVPNTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKRCFVRDPFNRAMGERYRREMLAHGGGREPLLMVQGMLEKCPSVEDFVEALVSDLDPDFETYFLDSE
SIO_010081: LOC119941409
subclass of: SO_0000673
so part of: LOC119941409
location: complement(join(1418272..1418369,1440203..1440276,1444513..1444634,1461652..1461771,1463416..1463490,1471258..1471367,1472501..1472705,1475074..1475151,1476971..1477124,1486519..1486571,1487340..1487400,1488547..1488595,1492896..1493052,1494299..1494481,1498585..1498648,1499220..1499306,1500988..1501076,1503064..1503237,1512614..1512814))
location: region:1418272-1512814:-1
so has part: feature:1512614-1512814:-1:exon
so has part: feature:1503064-1503237:-1:exon
so has part: feature:1500988-1501076:-1:exon
so has part: feature:1499220-1499306:-1:exon
so has part: feature:1498585-1498648:-1:exon
so has part: feature:1494299-1494481:-1:exon
so has part: feature:1492896-1493052:-1:exon
so has part: feature:1488547-1488595:-1:exon
so has part: feature:1487340-1487400:-1:exon
so has part: feature:1486519-1486571:-1:exon
so has part: feature:1476971-1477124:-1:exon
so has part: feature:1475074-1475151:-1:exon
so has part: feature:1472501-1472705:-1:exon
so has part: feature:1471258-1471367:-1:exon
so has part: feature:1463416-1463490:-1:exon
so has part: feature:1461652-1461771:-1:exon
so has part: feature:1444513-1444634:-1:exon
so has part: feature:1440203-1440276:-1:exon
so has part: feature:1418272-1418369:-1:exon

XP_038617760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1512614-1512814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503064-1503237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1500988-1501076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499220-1499306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498585-1498648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494299-1494481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492896-1493052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1488547-1488595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1487340-1487400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1486519-1486571:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1476971-1477124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1475074-1475151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472501-1472705:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471258-1471367:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1463416-1463490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1461652-1461771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1444513-1444634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1440203-1440276:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1418272-1418369:-1:exon

LOC119941621
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1522295..1526499
location: region:1522295-1526499:1
so has part: feature:1522295-1526499:1:exon
subclass of: SO_0000010

119941621
type: Gene
SIO_000068: ncbigene

position:1522295:1
position: 1522295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526499:1
position: 1526499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522295-1526499:1:exon

LOC119941621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941621
product: interleukin 18 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038762165.1
SIO_010081: LOC119941621
subclass of: SO_0000673
so part of: LOC119941621
location: join(1522295..1522444,1523684..1523819,1524671..1524794,1525229..1525404,1526375..1526499)
location: region:1522295-1526499:1
so has part: feature:1522295-1522444:1:exon
so has part: feature:1523684-1523819:1:exon
so has part: feature:1524671-1524794:1:exon
so has part: feature:1525229-1525404:1:exon
so has part: feature:1526375-1526499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1522295-1522444:1:exon

position:1522444:1
position: 1522444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1523684-1523819:1:exon

position:1523684:1
position: 1523684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523819:1
position: 1523819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1524671-1524794:1:exon

position:1524671:1
position: 1524671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524794:1
position: 1524794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1525229-1525404:1:exon

position:1525229:1
position: 1525229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525404:1
position: 1525404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1526375-1526499:1:exon

position:1526375:1
position: 1526375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119941621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-18-binding protein
translation: MYGDSQQWGGQGVTGFQDVVNSPSHKYKPQGSELHARAPKCPSPDSLEPQTFPSDLPLWVLCPGPCPDLPESLDFPSTVKCPGLEVRGPKNEVPFGVALNLSCSGCSLNREFSEMYWLGNGSFIEDLPGAVSEGDTRKVELSESRVLLLGELRIEALSPALRHTNFSCILLDPEGAAQSHVILDRLWDLAAGDTKGGGLTRGPGARTLKLMEALYTAGSGYAG
SIO_010081: LOC119941621
subclass of: SO_0000673
so part of: LOC119941621
location: join(1522295..1522444,1523684..1523819,1524671..1524794,1525229..1525404,1526375..1526460)
location: region:1522295-1526460:1
so has part: feature:1522295-1522444:1:exon
so has part: feature:1523684-1523819:1:exon
so has part: feature:1524671-1524794:1:exon
so has part: feature:1525229-1525404:1:exon
so has part: feature:1526375-1526460:1:exon

XP_038618093.1
type: Protein
SIO_000068: ncbiprotein

position:1526460:1
position: 1526460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522295-1522444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523684-1523819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1524671-1524794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525229-1525404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1526375-1526460:1:exon

LOC119941594
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1528319..1535099)
location: region:1528319-1535099:-1
so has part: feature:1528319-1535099:-1:exon
subclass of: SO_0000010

119941594
type: Gene
SIO_000068: ncbigene

position:1528319:-1
position: 1528319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535099:-1
position: 1535099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1528319-1535099:-1:exon

LOC119941594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941594
product: complement C1q and tumor necrosis factor-related protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038762123.1
SIO_010081: LOC119941594
subclass of: SO_0000673
so part of: LOC119941594
location: complement(join(1528319..1529196,1529866..1529928,1532160..1532348,1535026..1535099))
location: region:1528319-1535099:-1
so has part: feature:1535026-1535099:-1:exon
so has part: feature:1532160-1532348:-1:exon
so has part: feature:1529866-1529928:-1:exon
so has part: feature:1528319-1529196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1535026-1535099:-1:exon

position:1535026:-1
position: 1535026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1532160-1532348:-1:exon

position:1532160:-1
position: 1532160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532348:-1
position: 1532348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1529866-1529928:-1:exon

position:1529866:-1
position: 1529866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529928:-1
position: 1529928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1528319-1529196:-1:exon

position:1529196:-1
position: 1529196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119941594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9-like
translation: MSIWWVVLVVSIGTEPVLGQESCGQGHPGVPGSPGHNGLPGRDGRDGVKGDKGDTGDIGLRGRPGADGLAGQKGEPGAAGKVEEKGNKGEPGQRGWPGKFGPKGLVGPVGDRGQKGELGLQGHKGVKGDVGPVGPSGPRGEAGPRGDVGLPGAVGLVGPPGPRGGEGSPGPTGIQGLQGVRGWKGERGEKGRVGDAPELMKSAFTVGLTVATKFPPSNAPVRFDRVLYNGLNDYNPTTGKFTCTFPGVYYFTYHITVYSRNVKVSLVRNGASVLHTKDSYQGSEDQASGGTVLELKAGDQVWVQVAGGETFNGLFADLDDDTTFTGFLLFSY
SIO_010081: LOC119941594
subclass of: SO_0000673
so part of: LOC119941594
location: complement(join(1528427..1529196,1529866..1529928,1532160..1532325))
location: region:1528427-1532325:-1
so has part: feature:1532160-1532325:-1:exon
so has part: feature:1529866-1529928:-1:exon
so has part: feature:1528427-1529196:-1:exon

XP_038618051.1
type: Protein
SIO_000068: ncbiprotein

position:1528427:-1
position: 1528427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532325:-1
position: 1532325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532160-1532325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1529866-1529928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1528427-1529196:-1:exon

SPATA13
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1538878..1570441)
location: region:1538878-1570441:-1
so has part: feature:1538878-1570441:-1:exon
subclass of: SO_0000010

119941442
type: Gene
SIO_000068: ncbigene

position:1538878:-1
position: 1538878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570441:-1
position: 1570441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538878-1570441:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761886.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1538878..1540468,1541819..1541893,1542749..1543099,1544701..1544830,1547041..1547273,1547955..1548134,1548587..1548772,1549425..1549604,1550670..1550806,1559648..1559792,1561227..1561562,1566305..1568010,1570386..1570441))
location: region:1538878-1570441:-1
so has part: feature:1570386-1570441:-1:exon
so has part: feature:1566305-1568010:-1:exon
so has part: feature:1561227-1561562:-1:exon
so has part: feature:1559648-1559792:-1:exon
so has part: feature:1550670-1550806:-1:exon
so has part: feature:1549425-1549604:-1:exon
so has part: feature:1548587-1548772:-1:exon
so has part: feature:1547955-1548134:-1:exon
so has part: feature:1547041-1547273:-1:exon
so has part: feature:1544701-1544830:-1:exon
so has part: feature:1542749-1543099:-1:exon
so has part: feature:1541819-1541893:-1:exon
so has part: feature:1538878-1540468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1570386-1570441:-1:exon

position:1570386:-1
position: 1570386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1566305-1568010:-1:exon

position:1566305:-1
position: 1566305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568010:-1
position: 1568010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1561227-1561562:-1:exon

position:1561227:-1
position: 1561227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561562:-1
position: 1561562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1559648-1559792:-1:exon

position:1559648:-1
position: 1559648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559792:-1
position: 1559792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1550670-1550806:-1:exon

position:1550670:-1
position: 1550670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550806:-1
position: 1550806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1549425-1549604:-1:exon

position:1549425:-1
position: 1549425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1549604:-1
position: 1549604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548587-1548772:-1:exon

position:1548587:-1
position: 1548587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548772:-1
position: 1548772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1547955-1548134:-1:exon

position:1547955:-1
position: 1547955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548134:-1
position: 1548134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1547041-1547273:-1:exon

position:1547041:-1
position: 1547041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547273:-1
position: 1547273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1544701-1544830:-1:exon

position:1544701:-1
position: 1544701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544830:-1
position: 1544830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1542749-1543099:-1:exon

position:1542749:-1
position: 1542749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543099:-1
position: 1543099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1541819-1541893:-1:exon

position:1541819:-1
position: 1541819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541893:-1
position: 1541893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1538878-1540468:-1:exon

position:1540468:-1
position: 1540468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761887.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1538878..1540468,1541819..1541893,1542727..1543099,1544701..1544830,1547041..1547273,1547955..1548134,1548587..1548772,1549425..1549604,1550670..1550806,1559648..1559792,1561227..1561562,1566305..1568010,1570386..1570441))
location: region:1538878-1570441:-1
so has part: feature:1570386-1570441:-1:exon
so has part: feature:1566305-1568010:-1:exon
so has part: feature:1561227-1561562:-1:exon
so has part: feature:1559648-1559792:-1:exon
so has part: feature:1550670-1550806:-1:exon
so has part: feature:1549425-1549604:-1:exon
so has part: feature:1548587-1548772:-1:exon
so has part: feature:1547955-1548134:-1:exon
so has part: feature:1547041-1547273:-1:exon
so has part: feature:1544701-1544830:-1:exon
so has part: feature:1542727-1543099:-1:exon
so has part: feature:1541819-1541893:-1:exon
so has part: feature:1538878-1540468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1570386-1570441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566305-1568010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561227-1561562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559648-1559792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1550670-1550806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1549425-1549604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548587-1548772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547955-1548134:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1547041-1547273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1544701-1544830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1542727-1543099:-1:exon

position:1542727:-1
position: 1542727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1541819-1541893:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1538878-1540468:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MAPVPSGREHGPLLTCVVMESPEARVAGPVGGSVADGHKEQGVRDVGLSPSKLLRFLSAVTRKRTPPTLERPHSVVLEGSSSAWSALASFRKGGSALKKLRCSLVPGTQGRAGPGEGAPSGAHTELHSCAGPWSDWPRPVDGLTSDRLDPDASDDSDVGDDTFLRNTHRSRSIRRAYGVGRISLLDIEPHRPHGPGPLTPASCDPQGGDGQQGPAQGHCGVRRRSKSTDNLHFLKKSSFRRKSASSLAELKVVDDQPPPAVVVSSALAGPGQSREDHERPSGRWRSPLGVLRLVGNVADAARKREDPEGSAPAEGGGPLRARSNSRLHDDYSRRASGNWEPDRRRGPPTAWASGPSLGSPSSAIPRGPETRGRTGTIPPGPEEPKAPAGAAPCVAVLSPEALGQAPGSGKCPSRPASQSEGPPSPPGPATPKPQSPGASPARGGTRFRCPDNLSSLSLSSMDSDGRAEATAPGPGRSPGSFRASEPPGAHDDGNEDSGISSHSQLSLNLAPGPEEPEVVPDEWQKKPPDAEKTEVPRVTRRRGGSGKRPRPLSDFGQPAGRSSSIPEDSVAVESGESDRVDAVDPEAAEQPAGPGCPRGVRKRRPISVIGGVSLYAGHQEEGMKTLLAQAAARPPVPAHQVPPYKAVSARFRPLAYSQSTPVGLDRVGRRRQMRAANPHSDGGPESPALADDNGSEEDFSYEELCQAGPHYLPPGGDQLALNELLSDGSGVCAEALWDHVTMDEQELGFKAGDVIQVLEASNKDWWWGRHENKEAWFPASFVRLRVNQEELVETAGGARGSEQDTDAGQHHHKSAENKDQMRTNVVQEIVNTERVYIKHLKDICEGYIRQCRKHPGMFTAAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEDPHLSEIGSCFLQHQVGFAIYSEYCNNHPGACVELANLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDFGNIKAAYEAMKNVARLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTQVNKQGRGQQRTFFLFDHQLVSCRKDRLRRDMLYYKGRTDTDATELVDLEDGRDADSNAQVRHAFKLVSRETGEVHVFCARKQEDKQRWLQACAEERRRVWRFQRLRRNRQCSTPKSQDLGRRKGSRATGRAQCPRRTRVISPYTSATSPCLPASPSSRSLPWQSPRGNPLSSGTPSTGSPHSRSDTDLGLPLSCPTCSRQAPRRGPGSLC
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1540205..1540468,1541819..1541893,1542749..1543099,1544701..1544830,1547041..1547273,1547955..1548134,1548587..1548772,1549425..1549604,1550670..1550806,1559648..1559792,1561227..1561562,1566305..1567855))
location: region:1540205-1567855:-1
so has part: feature:1566305-1567855:-1:exon
so has part: feature:1561227-1561562:-1:exon
so has part: feature:1559648-1559792:-1:exon
so has part: feature:1550670-1550806:-1:exon
so has part: feature:1549425-1549604:-1:exon
so has part: feature:1548587-1548772:-1:exon
so has part: feature:1547955-1548134:-1:exon
so has part: feature:1547041-1547273:-1:exon
so has part: feature:1544701-1544830:-1:exon
so has part: feature:1542749-1543099:-1:exon
so has part: feature:1541819-1541893:-1:exon
so has part: feature:1540205-1540468:-1:exon

XP_038617814.1
type: Protein
SIO_000068: ncbiprotein

position:1540205:-1
position: 1540205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567855:-1
position: 1567855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566305-1567855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561227-1561562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559648-1559792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1550670-1550806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1549425-1549604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1548587-1548772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1547955-1548134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547041-1547273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544701-1544830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1542749-1543099:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1541819-1541893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1540205-1540468:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X2
translation: MAPVPSGREHGPLLTCVVMESPEARVAGPVGGSVADGHKEQGVRDVGLSPSKLLRFLSAVTRKRTPPTLERPHSVVLEGSSSAWSALASFRKGGSALKKLRCSLVPGTQGRAGPGEGAPSGAHTELHSCAGPWSDWPRPVDGLTSDRLDPDASDDSDVGDDTFLRNTHRSRSIRRAYGVGRISLLDIEPHRPHGPGPLTPASCDPQGGDGQQGPAQGHCGVRRRSKSTDNLHFLKKSSFRRKSASSLAELKVVDDQPPPAVVVSSALAGPGQSREDHERPSGRWRSPLGVLRLVGNVADAARKREDPEGSAPAEGGGPLRARSNSRLHDDYSRRASGNWEPDRRRGPPTAWASGPSLGSPSSAIPRGPETRGRTGTIPPGPEEPKAPAGAAPCVAVLSPEALGQAPGSGKCPSRPASQSEGPPSPPGPATPKPQSPGASPARGGTRFRCPDNLSSLSLSSMDSDGRAEATAPGPGRSPGSFRASEPPGAHDDGNEDSGISSHSQLSLNLAPGPEEPEVVPDEWQKKPPDAEKTEVPRVTRRRGGSGKRPRPLSDFGQPAGRSSSIPEDSVAVESGESDRVDAVDPEAAEQPAGPGCPRGVRKRRPISVIGGVSLYAGHQEEGMKTLLAQAAARPPVPAHQVPPYKAVSARFRPLAYSQSTPVGLDRVGRRRQMRAANPHSDGGPESPALADDNGSEEDFSYEELCQAGPHYLPPGGDQLALNELLSDGSGVCAEALWDHVTMDEQELGFKAGDVIQVLEASNKDWWWGRHENKEAWFPASFVRLRVNQEELVETAGGARGSEQDTDAGQHHHKSAENKDQMRTNVVQEIVNTERVYIKHLKDICEGYIRQCRKHPGMFTAAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEDPHLSEIGSCFLQHQVGFAIYSEYCNNHPGACVELANLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDFGNIKAAYEAMKNVARLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTQVNKQGRGQQRTFFLFDHQLVSCRKDRLRRDMLYYKGRTDTDATELVDLEDGRDADSNAQVRHAFKLVSRETGEVHVFCARKQEDKQRWLQACAEERRRVREDREMGVEISEAQKKQAMLNAQKPGSGKTKGLQGYRACSVPPPHQSYLPVHQRHITVPTSIPQQQVFALAEPKRKPSLFWNTFNRLAPFKK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1540284..1540468,1541819..1541893,1542727..1543099,1544701..1544830,1547041..1547273,1547955..1548134,1548587..1548772,1549425..1549604,1550670..1550806,1559648..1559792,1561227..1561562,1566305..1567855))
location: region:1540284-1567855:-1
so has part: feature:1566305-1567855:-1:exon
so has part: feature:1561227-1561562:-1:exon
so has part: feature:1559648-1559792:-1:exon
so has part: feature:1550670-1550806:-1:exon
so has part: feature:1549425-1549604:-1:exon
so has part: feature:1548587-1548772:-1:exon
so has part: feature:1547955-1548134:-1:exon
so has part: feature:1547041-1547273:-1:exon
so has part: feature:1544701-1544830:-1:exon
so has part: feature:1542727-1543099:-1:exon
so has part: feature:1541819-1541893:-1:exon
so has part: feature:1540284-1540468:-1:exon

XP_038617815.1
type: Protein
SIO_000068: ncbiprotein

position:1540284:-1
position: 1540284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566305-1567855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561227-1561562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559648-1559792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1550670-1550806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1549425-1549604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1548587-1548772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1547955-1548134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547041-1547273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544701-1544830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1542727-1543099:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1541819-1541893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1540284-1540468:-1:exon

AMER2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1651003..1658298)
location: region:1651003-1658298:-1
so has part: feature:1651003-1658298:-1:exon
subclass of: SO_0000010

119941622
type: Gene
SIO_000068: ncbigene

position:1651003:-1
position: 1651003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658298:-1
position: 1658298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651003-1658298:-1:exon

AMER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AMER2
product: APC membrane recruitment protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038762166.1
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(1651003..1656865,1656953..1657732,1657821..1658009,1658167..1658298))
location: region:1651003-1658298:-1
so has part: feature:1658167-1658298:-1:exon
so has part: feature:1657821-1658009:-1:exon
so has part: feature:1656953-1657732:-1:exon
so has part: feature:1651003-1656865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1658167-1658298:-1:exon

position:1658167:-1
position: 1658167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1657821-1658009:-1:exon

position:1657821:-1
position: 1657821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658009:-1
position: 1658009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1656953-1657732:-1:exon

position:1656953:-1
position: 1656953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657732:-1
position: 1657732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651003-1656865:-1:exon

position:1656865:-1
position: 1656865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2
translation: MERRAEPPPPPLGKTSRAPAFPFFGRRRGPGPGPGRGTKAAAGAGRGPGGPGPGPGPAVGRSHSFLSLLRRGGGSSGGPSGGPGSGGPSGQKRGLRAVLAALRWARKEAAPRQEAAPEPAAAAAAAASEPPSEPSLDRICLLLADVSSLKSFDSLTGCGDVTAEPDDEAAAPGGPPGGPPGGGGPPAAAPQDAWGRLARTPGTRGPRDPGTTPGTATRNRAPDRAPDRALDITLDRASDRAPDTTPDRAQDRALDRTLDRALDRTPDTAPDGALDREQDRAPDRTQDTAPDRALDREQDRAPDRTPDTASDRVPDRAQDRAPDRAPDRAPDRAPDRAPDRAQDRAPDRAPDDRALDRAPERVLDRPQDRGPDRVLDRAPDDRGALDRVLDRMPARVLDRAPDRAPDRPPDRPPDRPSDRAPDRLSDRAPDRAPDRPSDRAPDRAPDRPSDRAPDRAPSRAPDRAPAVGAREVSVVSSAAARPRLHRIPIPVPHKEDPAFRDKEPQEGVPNSDEGYWDSTTPGPEEDGTHRLQKEGLPRDSCSGDALYDLYADPDAAPDPETPGGGPRSKPASPGPVSGPLKTPGGALKDSKIPISVKHLPAGHHVGHHLPPRSEAPRTKIPVSKVLVRRVSHRGLVGTALRPAAACHDSAKKL
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(1656005..1656865,1656953..1657732,1657821..1658009,1658167..1658298))
location: region:1656005-1658298:-1
so has part: feature:1658167-1658298:-1:exon
so has part: feature:1657821-1658009:-1:exon
so has part: feature:1656953-1657732:-1:exon
so has part: feature:1656005-1656865:-1:exon

XP_038618094.1
type: Protein
SIO_000068: ncbiprotein

position:1656005:-1
position: 1656005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1658167-1658298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1657821-1658009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1656953-1657732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1656005-1656865:-1:exon

MTMR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1673009..1702023)
location: region:1673009-1702023:-1
so has part: feature:1673009-1702023:-1:exon
subclass of: SO_0000010

119941337
type: Gene
SIO_000068: ncbigene

position:1673009:-1
position: 1673009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702023:-1
position: 1702023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673009-1702023:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR6
product: myotubularin related protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761728.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1673009..1675579,1676487..1676613,1676708..1676839,1678153..1678353,1678459..1678508,1679326..1679451,1680003..1680112,1680727..1680859,1684777..1684911,1685455..1685583,1685812..1685969,1687322..1687484,1689835..1689951,1701937..1702023))
location: region:1673009-1702023:-1
so has part: feature:1701937-1702023:-1:exon
so has part: feature:1689835-1689951:-1:exon
so has part: feature:1687322-1687484:-1:exon
so has part: feature:1685812-1685969:-1:exon
so has part: feature:1685455-1685583:-1:exon
so has part: feature:1684777-1684911:-1:exon
so has part: feature:1680727-1680859:-1:exon
so has part: feature:1680003-1680112:-1:exon
so has part: feature:1679326-1679451:-1:exon
so has part: feature:1678459-1678508:-1:exon
so has part: feature:1678153-1678353:-1:exon
so has part: feature:1676708-1676839:-1:exon
so has part: feature:1676487-1676613:-1:exon
so has part: feature:1673009-1675579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701937-1702023:-1:exon

position:1701937:-1
position: 1701937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1689835-1689951:-1:exon

position:1689835:-1
position: 1689835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689951:-1
position: 1689951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1687322-1687484:-1:exon

position:1687322:-1
position: 1687322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687484:-1
position: 1687484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1685812-1685969:-1:exon

position:1685812:-1
position: 1685812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685969:-1
position: 1685969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1685455-1685583:-1:exon

position:1685455:-1
position: 1685455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685583:-1
position: 1685583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1684777-1684911:-1:exon

position:1684777:-1
position: 1684777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684911:-1
position: 1684911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1680727-1680859:-1:exon

position:1680727:-1
position: 1680727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680859:-1
position: 1680859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1680003-1680112:-1:exon

position:1680003:-1
position: 1680003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680112:-1
position: 1680112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1679326-1679451:-1:exon

position:1679326:-1
position: 1679326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679451:-1
position: 1679451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1678459-1678508:-1:exon

position:1678459:-1
position: 1678459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678508:-1
position: 1678508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1678153-1678353:-1:exon

position:1678153:-1
position: 1678153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678353:-1
position: 1678353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1676708-1676839:-1:exon

position:1676708:-1
position: 1676708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676839:-1
position: 1676839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1676487-1676613:-1:exon

position:1676487:-1
position: 1676487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676613:-1
position: 1676613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1673009-1675579:-1:exon

position:1675579:-1
position: 1675579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR6
product: myotubularin related protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761727.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1673009..1675579,1676487..1676613,1676708..1676839,1678153..1678353,1678459..1678508,1679326..1679451,1680003..1680112,1680727..1680859,1683565..1683726,1684777..1684911,1685455..1685583,1685812..1685969,1687322..1687484,1689835..1689951,1701937..1702023))
location: region:1673009-1702023:-1
so has part: feature:1701937-1702023:-1:exon
so has part: feature:1689835-1689951:-1:exon
so has part: feature:1687322-1687484:-1:exon
so has part: feature:1685812-1685969:-1:exon
so has part: feature:1685455-1685583:-1:exon
so has part: feature:1684777-1684911:-1:exon
so has part: feature:1683565-1683726:-1:exon
so has part: feature:1680727-1680859:-1:exon
so has part: feature:1680003-1680112:-1:exon
so has part: feature:1679326-1679451:-1:exon
so has part: feature:1678459-1678508:-1:exon
so has part: feature:1678153-1678353:-1:exon
so has part: feature:1676708-1676839:-1:exon
so has part: feature:1676487-1676613:-1:exon
so has part: feature:1673009-1675579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701937-1702023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1689835-1689951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1687322-1687484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685812-1685969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685455-1685583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684777-1684911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683565-1683726:-1:exon

position:1683565:-1
position: 1683565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683726:-1
position: 1683726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1680727-1680859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1680003-1680112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1679326-1679451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1678459-1678508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1678153-1678353:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1676708-1676839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1676487-1676613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1673009-1675579:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X2
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRVAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDANRDYKICETYPRELYVPRIASTPIIVGSSKFRSKGRFPVLSYYHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYMYVMDTRPKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAITVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMVLIEKDWISFGHKFSDRCGQLGGDPKEISPVFTQFLECVWHLSEQFPQAFEFNEAFLLQIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDQKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMRKKEQNQQLEKEIRELEAKIKQTKTRRVDEAPTKECLPPGQPTAQPGPRPSPCFRKEHRLGPASSGDKAIDCSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1675313..1675579,1676487..1676613,1676708..1676839,1678153..1678353,1678459..1678508,1679326..1679451,1680003..1680112,1680727..1680859,1684777..1684911,1685455..1685583,1685812..1685969,1687322..1687484,1689835..1689951,1701937..1701960))
location: region:1675313-1701960:-1
so has part: feature:1701937-1701960:-1:exon
so has part: feature:1689835-1689951:-1:exon
so has part: feature:1687322-1687484:-1:exon
so has part: feature:1685812-1685969:-1:exon
so has part: feature:1685455-1685583:-1:exon
so has part: feature:1684777-1684911:-1:exon
so has part: feature:1680727-1680859:-1:exon
so has part: feature:1680003-1680112:-1:exon
so has part: feature:1679326-1679451:-1:exon
so has part: feature:1678459-1678508:-1:exon
so has part: feature:1678153-1678353:-1:exon
so has part: feature:1676708-1676839:-1:exon
so has part: feature:1676487-1676613:-1:exon
so has part: feature:1675313-1675579:-1:exon

XP_038617656.1
type: Protein
SIO_000068: ncbiprotein

position:1675313:-1
position: 1675313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701960:-1
position: 1701960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701937-1701960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1689835-1689951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1687322-1687484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685812-1685969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685455-1685583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684777-1684911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680727-1680859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1680003-1680112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1679326-1679451:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1678459-1678508:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1678153-1678353:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1676708-1676839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1676487-1676613:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1675313-1675579:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X1
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRVAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDANRDYKICETYPRELYVPRIASTPIIVGSSKFRSKGRFPVLSYYHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYMYVMDTRPKRPEQSWKATQTNIGRVLVRISSKIWTDEKKRESDERAQASSSEPSNVSRQFYGKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAITVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMVLIEKDWISFGHKFSDRCGQLGGDPKEISPVFTQFLECVWHLSEQFPQAFEFNEAFLLQIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDQKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMRKKEQNQQLEKEIRELEAKIKQTKTRRVDEAPTKECLPPGQPTAQPGPRPSPCFRKEHRLGPASSGDKAIDCSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1675313..1675579,1676487..1676613,1676708..1676839,1678153..1678353,1678459..1678508,1679326..1679451,1680003..1680112,1680727..1680859,1683565..1683726,1684777..1684911,1685455..1685583,1685812..1685969,1687322..1687484,1689835..1689951,1701937..1701960))
location: region:1675313-1701960:-1
so has part: feature:1701937-1701960:-1:exon
so has part: feature:1689835-1689951:-1:exon
so has part: feature:1687322-1687484:-1:exon
so has part: feature:1685812-1685969:-1:exon
so has part: feature:1685455-1685583:-1:exon
so has part: feature:1684777-1684911:-1:exon
so has part: feature:1683565-1683726:-1:exon
so has part: feature:1680727-1680859:-1:exon
so has part: feature:1680003-1680112:-1:exon
so has part: feature:1679326-1679451:-1:exon
so has part: feature:1678459-1678508:-1:exon
so has part: feature:1678153-1678353:-1:exon
so has part: feature:1676708-1676839:-1:exon
so has part: feature:1676487-1676613:-1:exon
so has part: feature:1675313-1675579:-1:exon

XP_038617655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1701937-1701960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1689835-1689951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1687322-1687484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685812-1685969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685455-1685583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684777-1684911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683565-1683726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1680727-1680859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1680003-1680112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1679326-1679451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1678459-1678508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1678153-1678353:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1676708-1676839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1676487-1676613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1675313-1675579:-1:exon

NUP58
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1705761..1750902
location: region:1705761-1750902:1
so has part: feature:1705761-1750902:1:exon
subclass of: SO_0000010

119941198
type: Gene
SIO_000068: ncbigene

position:1705761:1
position: 1705761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750902:1
position: 1750902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705761-1750902:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP58
product: nucleoporin 58, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761524.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1705761..1705880,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1739794)
location: region:1705761-1739794:1
so has part: feature:1705761-1705880:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1739794:1:exon

position:1739794:1
position: 1739794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705761-1705880:1:exon

position:1705880:1
position: 1705880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

position:1717659:1
position: 1717659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717804:1
position: 1717804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

position:1719139:1
position: 1719139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719174:1
position: 1719174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

position:1719914:1
position: 1719914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1720066:1
position: 1720066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

position:1720401:1
position: 1720401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1720535:1
position: 1720535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

position:1721021:1
position: 1721021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721131:1
position: 1721131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

position:1722479:1
position: 1722479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722503:1
position: 1722503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

position:1723230:1
position: 1723230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723295:1
position: 1723295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

position:1723477:1
position: 1723477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723651:1
position: 1723651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

position:1724265:1
position: 1724265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724344:1
position: 1724344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

position:1724900:1
position: 1724900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725018:1
position: 1725018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

position:1725928:1
position: 1725928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726010:1
position: 1726010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

position:1726998:1
position: 1726998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727199:1
position: 1727199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

position:1733038:1
position: 1733038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733136:1
position: 1733136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

position:1734398:1
position: 1734398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734493:1
position: 1734493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1737643-1739794:1:exon

position:1737643:1
position: 1737643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X2
translation: MPKKKNLWYLELIGDKEYVSTKSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFASKSTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAGSATPFALPVTSTSAGGLSLSSALTSTPAAASSGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKVFLGDAVDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGAPFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTANKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGLGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1705813..1705880,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1737812)
location: region:1705813-1737812:1
so has part: feature:1705813-1705880:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1737812:1:exon

XP_038617452.1
type: Protein
SIO_000068: ncbiprotein

position:1705813:1
position: 1705813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737812:1
position: 1737812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705813-1705880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1737643-1737812:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP58
product: nucleoporin 58, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761526.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707201..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1739794)
location: region:1707201-1739794:1
so has part: feature:1707201-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1739794:1:exon

position:1707201:1
position: 1707201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707201-1707334:1:exon

position:1707334:1
position: 1707334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1737643-1739794:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP58
product: nucleoporin 58, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761525.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707202..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1750628..1750902)
location: region:1707202-1750902:1
so has part: feature:1707202-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1750628-1750902:1:exon

position:1707202:1
position: 1707202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707202-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1750628-1750902:1:exon

position:1750628:1
position: 1750628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP58
product: nucleoporin 58, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761527.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707202..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1750628..1750902)
location: region:1707202-1750902:1
so has part: feature:1707202-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1750628-1750902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1707202-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1750628-1750902:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP58
product: nucleoporin 58, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761523.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707202..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1739794)
location: region:1707202-1739794:1
so has part: feature:1707202-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1739794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1707202-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1737643-1739794:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X3
translation: MSAGFSFGASTLGSAAPGPTAGTAASFSFGAAPTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFASKSTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAGSATPFALPVTSTSAGGLSLSSALTSTPAAASSGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKVFLGDAVDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGAPFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTANKPSGSLSAGPRLLLFTKPSVIETDEVGRKYQF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707228..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1750628..1750701)
location: region:1707228-1750701:1
so has part: feature:1707228-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1750628-1750701:1:exon

XP_038617453.1
type: Protein
SIO_000068: ncbiprotein

position:1707228:1
position: 1707228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750701:1
position: 1750701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707228-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1750628-1750701:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X5
translation: MSAGFSFGASTLGSAAPGPTAGTAASFSFGAAPTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFASKSTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAGSATPFALPVTSTSAGGLSLSSALTSTPAAASSGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKVFLGDAVDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPRLLLFTKPSVIETDEVGRKYQF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707228..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1750628..1750701)
location: region:1707228-1750701:1
so has part: feature:1707228-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1750628-1750701:1:exon

XP_038617455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1707228-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1750628-1750701:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X1
translation: MSAGFSFGASTLGSAAPGPTAGTAASFSFGAAPTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFASKSTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAGSATPFALPVTSTSAGGLSLSSALTSTPAAASSGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKVFLGDAVDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGAPFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTANKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGLGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707228..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1721021..1721131,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1737812)
location: region:1707228-1737812:1
so has part: feature:1707228-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1721021-1721131:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1737812:1:exon

XP_038617451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1707228-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1721021-1721131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1737643-1737812:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X4
translation: MSAGFSFGASTLGSAAPGPTAGTAASFSFGAAPTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFASKSTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAGSATPFALPVTSTSAGGLSLSSALTSTPAAASSGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKVFLGDAVDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGAPFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTANKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGLGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1707228..1707334,1717659..1717804,1719139..1719174,1719914..1720066,1720401..1720535,1722479..1722503,1723230..1723295,1723477..1723651,1724265..1724344,1724900..1725018,1725928..1726010,1726998..1727199,1733038..1733136,1734398..1734493,1737643..1737812)
location: region:1707228-1737812:1
so has part: feature:1707228-1707334:1:exon
so has part: feature:1717659-1717804:1:exon
so has part: feature:1719139-1719174:1:exon
so has part: feature:1719914-1720066:1:exon
so has part: feature:1720401-1720535:1:exon
so has part: feature:1722479-1722503:1:exon
so has part: feature:1723230-1723295:1:exon
so has part: feature:1723477-1723651:1:exon
so has part: feature:1724265-1724344:1:exon
so has part: feature:1724900-1725018:1:exon
so has part: feature:1725928-1726010:1:exon
so has part: feature:1726998-1727199:1:exon
so has part: feature:1733038-1733136:1:exon
so has part: feature:1734398-1734493:1:exon
so has part: feature:1737643-1737812:1:exon

XP_038617454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1707228-1707334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717659-1717804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1719139-1719174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719914-1720066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1720401-1720535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1722479-1722503:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1723230-1723295:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1723477-1723651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1724265-1724344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724900-1725018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1725928-1726010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726998-1727199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1733038-1733136:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1734398-1734493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1737643-1737812:1:exon

SHISA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1761476..1774649
location: region:1761476-1774649:1
so has part: feature:1761476-1774649:1:exon
subclass of: SO_0000010

119941623
type: Gene
SIO_000068: ncbigene

position:1761476:1
position: 1761476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774649:1
position: 1774649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1761476-1774649:1:exon

SHISA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SHISA2
product: shisa family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038762167.1
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: join(1761476..1761971,1773200..1774649)
location: region:1761476-1774649:1
so has part: feature:1761476-1761971:1:exon
so has part: feature:1773200-1774649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1761476-1761971:1:exon

position:1761971:1
position: 1761971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773200-1774649:1:exon

position:1773200:1
position: 1773200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHISA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-2 homolog
translation: MRGAGAPRAYNMSAPGGGAASGAGTGPRERAPGSGHRPPFPSPSSRAMLPVPSRGWWRPPPLVPRSLPPPLLLLLLLWASGSRGSGEYCHGWRSAQGGWRSGFQCPERFDQGDATICCGGCALRYCCASPDARLDQGGCHNDGRQPGPDTPAQPGTNPRAPAGSAVPIYVPFLIVGSVFVAFVIVGSLVAACCCRCLRPKQEPQPSRAPAGSRLLETIPMIPSASTSRASSSRQASTAASSSSSANSGARAPPARAQTNCCLPEGTMNNVYVNMPTNFSVLNCQQATQIVPHQGQYLHPQYVGYTVPHDSVPITPVPPFLDGLQPGFRQIQAPYPPHAQGEQKMYPAVTV
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: join(1761476..1761971,1773200..1773756)
location: region:1761476-1773756:1
so has part: feature:1761476-1761971:1:exon
so has part: feature:1773200-1773756:1:exon

XP_038618095.1
type: Protein
SIO_000068: ncbiprotein

position:1773756:1
position: 1773756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1761476-1761971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773200-1773756:1:exon

ATP8A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1778522..2112299)
location: region:1778522-2112299:-1
so has part: feature:1778522-2112299:-1:exon
subclass of: SO_0000010

119941589
type: Gene
SIO_000068: ncbigene

position:1778522:-1
position: 1778522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112299:-1
position: 2112299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778522-2112299:-1:exon

ATP8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ATP8A2
product: ATPase phospholipid transporting 8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038762117.1
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1778522..1778892,1782508..1782599,1786430..1786534,1787566..1787654,1834337..1834444,1836853..1836909,1837252..1837313,1845442..1845520,1849844..1849966,1854886..1854960,1894602..1894712,1897016..1897199,1943854..1944026,1982003..1982067,1991257..1991395,2003241..2003380,2005891..2005975,2008836..2008905,2011544..2011593,2014918..2015000,2016831..2016936,2023099..2023174,2023891..2023935,2026501..2026589,2027333..2027410,2028519..2028646,2030172..2030337,2033258..2033369,2035689..2035816,2037167..2037236,2038758..2038831,2042371..2042411,2043242..2043287,2045582..2045680,2048780..2048879,2075973..2076150,2112218..2112299))
location: region:1778522-2112299:-1
so has part: feature:2112218-2112299:-1:exon
so has part: feature:2075973-2076150:-1:exon
so has part: feature:2048780-2048879:-1:exon
so has part: feature:2045582-2045680:-1:exon
so has part: feature:2043242-2043287:-1:exon
so has part: feature:2042371-2042411:-1:exon
so has part: feature:2038758-2038831:-1:exon
so has part: feature:2037167-2037236:-1:exon
so has part: feature:2035689-2035816:-1:exon
so has part: feature:2033258-2033369:-1:exon
so has part: feature:2030172-2030337:-1:exon
so has part: feature:2028519-2028646:-1:exon
so has part: feature:2027333-2027410:-1:exon
so has part: feature:2026501-2026589:-1:exon
so has part: feature:2023891-2023935:-1:exon
so has part: feature:2023099-2023174:-1:exon
so has part: feature:2016831-2016936:-1:exon
so has part: feature:2014918-2015000:-1:exon
so has part: feature:2011544-2011593:-1:exon
so has part: feature:2008836-2008905:-1:exon
so has part: feature:2005891-2005975:-1:exon
so has part: feature:2003241-2003380:-1:exon
so has part: feature:1991257-1991395:-1:exon
so has part: feature:1982003-1982067:-1:exon
so has part: feature:1943854-1944026:-1:exon
so has part: feature:1897016-1897199:-1:exon
so has part: feature:1894602-1894712:-1:exon
so has part: feature:1854886-1854960:-1:exon
so has part: feature:1849844-1849966:-1:exon
so has part: feature:1845442-1845520:-1:exon
so has part: feature:1837252-1837313:-1:exon
so has part: feature:1836853-1836909:-1:exon
so has part: feature:1834337-1834444:-1:exon
so has part: feature:1787566-1787654:-1:exon
so has part: feature:1786430-1786534:-1:exon
so has part: feature:1782508-1782599:-1:exon
so has part: feature:1778522-1778892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2112218-2112299:-1:exon

position:2112218:-1
position: 2112218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2075973-2076150:-1:exon

position:2075973:-1
position: 2075973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076150:-1
position: 2076150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2048780-2048879:-1:exon

position:2048780:-1
position: 2048780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2048879:-1
position: 2048879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2045582-2045680:-1:exon

position:2045582:-1
position: 2045582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045680:-1
position: 2045680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2043242-2043287:-1:exon

position:2043242:-1
position: 2043242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043287:-1
position: 2043287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2042371-2042411:-1:exon

position:2042371:-1
position: 2042371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042411:-1
position: 2042411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2038758-2038831:-1:exon

position:2038758:-1
position: 2038758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038831:-1
position: 2038831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2037167-2037236:-1:exon

position:2037167:-1
position: 2037167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037236:-1
position: 2037236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2035689-2035816:-1:exon

position:2035689:-1
position: 2035689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035816:-1
position: 2035816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2033258-2033369:-1:exon

position:2033258:-1
position: 2033258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033369:-1
position: 2033369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2030172-2030337:-1:exon

position:2030172:-1
position: 2030172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2030337:-1
position: 2030337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2028519-2028646:-1:exon

position:2028519:-1
position: 2028519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2028646:-1
position: 2028646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2027333-2027410:-1:exon

position:2027333:-1
position: 2027333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2027410:-1
position: 2027410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2026501-2026589:-1:exon

position:2026501:-1
position: 2026501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026589:-1
position: 2026589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2023891-2023935:-1:exon

position:2023891:-1
position: 2023891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023935:-1
position: 2023935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2023099-2023174:-1:exon

position:2023099:-1
position: 2023099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023174:-1
position: 2023174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2016831-2016936:-1:exon

position:2016831:-1
position: 2016831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2016936:-1
position: 2016936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2014918-2015000:-1:exon

position:2014918:-1
position: 2014918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2015000:-1
position: 2015000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2011544-2011593:-1:exon

position:2011544:-1
position: 2011544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2011593:-1
position: 2011593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2008836-2008905:-1:exon

position:2008836:-1
position: 2008836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2008905:-1
position: 2008905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2005891-2005975:-1:exon

position:2005891:-1
position: 2005891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005975:-1
position: 2005975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2003241-2003380:-1:exon

position:2003241:-1
position: 2003241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003380:-1
position: 2003380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1991257-1991395:-1:exon

position:1991257:-1
position: 1991257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991395:-1
position: 1991395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1982003-1982067:-1:exon

position:1982003:-1
position: 1982003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982067:-1
position: 1982067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1943854-1944026:-1:exon

position:1943854:-1
position: 1943854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944026:-1
position: 1944026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1897016-1897199:-1:exon

position:1897016:-1
position: 1897016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897199:-1
position: 1897199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1894602-1894712:-1:exon

position:1894602:-1
position: 1894602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894712:-1
position: 1894712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1854886-1854960:-1:exon

position:1854886:-1
position: 1854886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854960:-1
position: 1854960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1849844-1849966:-1:exon

position:1849844:-1
position: 1849844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849966:-1
position: 1849966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1845442-1845520:-1:exon

position:1845442:-1
position: 1845442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845520:-1
position: 1845520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1837252-1837313:-1:exon

position:1837252:-1
position: 1837252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837313:-1
position: 1837313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1836853-1836909:-1:exon

position:1836853:-1
position: 1836853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1836909:-1
position: 1836909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1834337-1834444:-1:exon

position:1834337:-1
position: 1834337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834444:-1
position: 1834444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1787566-1787654:-1:exon

position:1787566:-1
position: 1787566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787654:-1
position: 1787654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1786430-1786534:-1:exon

position:1786430:-1
position: 1786430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786534:-1
position: 1786534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1782508-1782599:-1:exon

position:1782508:-1
position: 1782508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782599:-1
position: 1782599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1778522-1778892:-1:exon

position:1778892:-1
position: 1778892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB
translation: MPTGRGLGTALKMLAFGSKPASCGRSPPGPVRSPPSSSGYRKADDEMSGAPSSADPEQPAARTIHLNQPQPTKFRDNRVSTAKYSVVTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIFILTVAGIKEIIEDYKRHTADNAVNKKKTIVLRSGMWQNIIWKEVAVGDIVKVTNGQHLPADMIIVSSSEPQAMCYIETSNLDGETNLKIRQGLTQTANLQSREELIKVTGKIECEGPNRHLYDFTGNLRLNGNSPVPIGPDQILLRGAQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALLWNRTHGQVNWYLGTTEAVSNNFGYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELVRERSSEDFSQLSPPTSESCEFDDPRLLQNIENDHPTAACIQEFLTLLAVCHTVVPERAGSTIIYQASSPDEGALVKGAKKLGFVFTGRTPHSVIIEALGQEETFEILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADNVIFDRLSKNSQYMEQTLCHLEYFATEGLRTLCVAYVDLSESTYQEWLQTYNQASTILKDRAQRLEECYEIIEKDLLLLGATAIEDRLQAGVPETIATLMKAEIKIWILTGDKQETAINIGYSCRLISQSMSLVLVNEDSLDATRAALTQHCTSLGDSLGKENDIALIIDGQTLKYALSFEVRQSFLDLALSCKAVICCRVSPLQKSEIVDMVKKHVNAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSIAQFAYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERTCTQESMLRFPQLYKITQNADGFNTKVFWGHCINALIHSIILFWFPLKVLEHDSVFTSGHVTDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLLWLVFFGVYSTFWPVIPLAPDMVGQARMVLQCGHFWLGLLLVPMTCLIEDVAWRAAKHTYRKTLLEQVQELETKSRELGRAALRDSNGKSVNERDHLLKRLGRKTPPTLFRAHSIQQGVPHGYAFSQEEHGVVSQSEVVRSYDTTKQRTRPA
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1778795..1778892,1782508..1782599,1786430..1786534,1787566..1787654,1834337..1834444,1836853..1836909,1837252..1837313,1845442..1845520,1849844..1849966,1854886..1854960,1894602..1894712,1897016..1897199,1943854..1944026,1982003..1982067,1991257..1991395,2003241..2003380,2005891..2005975,2008836..2008905,2011544..2011593,2014918..2015000,2016831..2016936,2023099..2023174,2023891..2023935,2026501..2026589,2027333..2027410,2028519..2028646,2030172..2030337,2033258..2033369,2035689..2035816,2037167..2037236,2038758..2038831,2042371..2042411,2043242..2043287,2045582..2045680,2048780..2048879,2075973..2076150,2112218..2112278))
location: region:1778795-2112278:-1
so has part: feature:2112218-2112278:-1:exon
so has part: feature:2075973-2076150:-1:exon
so has part: feature:2048780-2048879:-1:exon
so has part: feature:2045582-2045680:-1:exon
so has part: feature:2043242-2043287:-1:exon
so has part: feature:2042371-2042411:-1:exon
so has part: feature:2038758-2038831:-1:exon
so has part: feature:2037167-2037236:-1:exon
so has part: feature:2035689-2035816:-1:exon
so has part: feature:2033258-2033369:-1:exon
so has part: feature:2030172-2030337:-1:exon
so has part: feature:2028519-2028646:-1:exon
so has part: feature:2027333-2027410:-1:exon
so has part: feature:2026501-2026589:-1:exon
so has part: feature:2023891-2023935:-1:exon
so has part: feature:2023099-2023174:-1:exon
so has part: feature:2016831-2016936:-1:exon
so has part: feature:2014918-2015000:-1:exon
so has part: feature:2011544-2011593:-1:exon
so has part: feature:2008836-2008905:-1:exon
so has part: feature:2005891-2005975:-1:exon
so has part: feature:2003241-2003380:-1:exon
so has part: feature:1991257-1991395:-1:exon
so has part: feature:1982003-1982067:-1:exon
so has part: feature:1943854-1944026:-1:exon
so has part: feature:1897016-1897199:-1:exon
so has part: feature:1894602-1894712:-1:exon
so has part: feature:1854886-1854960:-1:exon
so has part: feature:1849844-1849966:-1:exon
so has part: feature:1845442-1845520:-1:exon
so has part: feature:1837252-1837313:-1:exon
so has part: feature:1836853-1836909:-1:exon
so has part: feature:1834337-1834444:-1:exon
so has part: feature:1787566-1787654:-1:exon
so has part: feature:1786430-1786534:-1:exon
so has part: feature:1782508-1782599:-1:exon
so has part: feature:1778795-1778892:-1:exon

XP_038618045.1
type: Protein
SIO_000068: ncbiprotein

position:1778795:-1
position: 1778795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112278:-1
position: 2112278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112218-2112278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2075973-2076150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2048780-2048879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2045582-2045680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2043242-2043287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2042371-2042411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2038758-2038831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2037167-2037236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035689-2035816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2033258-2033369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2030172-2030337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2028519-2028646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2027333-2027410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2026501-2026589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2023891-2023935:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2023099-2023174:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2016831-2016936:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2014918-2015000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2011544-2011593:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2008836-2008905:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2005891-2005975:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2003241-2003380:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1991257-1991395:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1982003-1982067:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1943854-1944026:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1897016-1897199:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1894602-1894712:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854886-1854960:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1849844-1849966:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1845442-1845520:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1837252-1837313:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1836853-1836909:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1834337-1834444:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1787566-1787654:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1786430-1786534:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1782508-1782599:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1778795-1778892:-1:exon

LOC119941624
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2131535..2132896
location: region:2131535-2132896:1
so has part: feature:2131535-2132896:1:exon
subclass of: SO_0000010

119941624
type: Gene
SIO_000068: ncbigene

position:2131535:1
position: 2131535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132896:1
position: 2132896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2131535-2132896:1:exon

LOC119941624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119941624
product: collagen alpha-1(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038762168.1
SIO_010081: LOC119941624
subclass of: SO_0000673
so part of: LOC119941624
location: 2131535..2132896
location: region:2131535-2132896:1
so has part: feature:2131535-2132896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2131535-2132896:1:exon

LOC119941624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119941624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MGDASASLPAGTTNPSMPGFAPFRLDGRGERGTQQTPSLRGLQIPGCPASPRSDWTGDAWDAFPTGTTNPSMPRFALFPFAGEGGNGGRIGHRPCEDYKSQHAPLFPVPIGRQGGNASDSLLARTTNPSMPRFALIPFAAVEGRWETQQTPSPRGLLNPSMPRFALFPFAGDGGGERSRLPPRGDYKSQHAPLCPVPIGRQSGNGGDASDSLLARTTNPSVPRFDLIPFAAGGEEMQQTPSPRGPQIPACPTPPLSDWTGDASDSLPTGTTSPSMPRSSPFRLYGRRVGLPPRGDYRSQHAPLCPVPIGREGGNASASLPAGTTNPSMPRCAPFRLDGRVGTYRPPSPRGLQVPACPVPTGRETRGPPSPRGLQIPACNTPPRSDWTGGWERTDLPPRGDYNSQHAPLPPVPIGREGGNASASLPAGTPSPSMPRRSPFRSERACARAARRGP
SIO_010081: LOC119941624
subclass of: SO_0000673
so part of: LOC119941624
location: 2131535..2132896
location: region:2131535-2132896:1
so has part: feature:2131535-2132896:1:exon

XP_038618096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2131535-2132896:1:exon

CDK8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2133101..2225559
location: region:2133101-2225559:1
so has part: feature:2133101-2225559:1:exon
subclass of: SO_0000010

119941440
type: Gene
SIO_000068: ncbigene

position:2133101:1
position: 2133101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225559:1
position: 2225559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133101-2225559:1:exon

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761883.1
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(2133101..2133335,2184741..2184816,2191210..2191320,2195361..2195501,2206679..2206736,2209406..2209537,2213415..2213558,2214830..2214899,2215922..2215994,2218951..2219048,2220382..2220460,2220565..2220720,2224259..2225559)
location: region:2133101-2225559:1
so has part: feature:2133101-2133335:1:exon
so has part: feature:2184741-2184816:1:exon
so has part: feature:2191210-2191320:1:exon
so has part: feature:2195361-2195501:1:exon
so has part: feature:2206679-2206736:1:exon
so has part: feature:2209406-2209537:1:exon
so has part: feature:2213415-2213558:1:exon
so has part: feature:2214830-2214899:1:exon
so has part: feature:2215922-2215994:1:exon
so has part: feature:2218951-2219048:1:exon
so has part: feature:2220382-2220460:1:exon
so has part: feature:2220565-2220720:1:exon
so has part: feature:2224259-2225559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2133101-2133335:1:exon

position:2133335:1
position: 2133335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2184741-2184816:1:exon

position:2184741:1
position: 2184741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184816:1
position: 2184816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2191210-2191320:1:exon

position:2191210:1
position: 2191210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2191320:1
position: 2191320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2195361-2195501:1:exon

position:2195361:1
position: 2195361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195501:1
position: 2195501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2206679-2206736:1:exon

position:2206679:1
position: 2206679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2206736:1
position: 2206736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2209406-2209537:1:exon

position:2209406:1
position: 2209406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209537:1
position: 2209537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2213415-2213558:1:exon

position:2213415:1
position: 2213415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213558:1
position: 2213558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2214830-2214899:1:exon

position:2214830:1
position: 2214830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214899:1
position: 2214899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2215922-2215994:1:exon

position:2215922:1
position: 2215922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215994:1
position: 2215994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2218951-2219048:1:exon

position:2218951:1
position: 2218951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2219048:1
position: 2219048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2220382-2220460:1:exon

position:2220382:1
position: 2220382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220460:1
position: 2220460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2220565-2220720:1:exon

position:2220565:1
position: 2220565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220720:1
position: 2220720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2224259-2225559:1:exon

position:2224259:1
position: 2224259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761881.1
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(2133102..2133335,2184741..2184816,2191210..2191320,2195361..2195501,2206679..2206736,2209406..2209537,2213415..2213558,2214830..2214899,2215922..2215994,2218951..2219048,2220382..2220460,2220562..2220720,2224259..2225559)
location: region:2133102-2225559:1
so has part: feature:2133102-2133335:1:exon
so has part: feature:2184741-2184816:1:exon
so has part: feature:2191210-2191320:1:exon
so has part: feature:2195361-2195501:1:exon
so has part: feature:2206679-2206736:1:exon
so has part: feature:2209406-2209537:1:exon
so has part: feature:2213415-2213558:1:exon
so has part: feature:2214830-2214899:1:exon
so has part: feature:2215922-2215994:1:exon
so has part: feature:2218951-2219048:1:exon
so has part: feature:2220382-2220460:1:exon
so has part: feature:2220562-2220720:1:exon
so has part: feature:2224259-2225559:1:exon

position:2133102:1
position: 2133102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133102-2133335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2184741-2184816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191210-2191320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2195361-2195501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206679-2206736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2209406-2209537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213415-2213558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2214830-2214899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2215922-2215994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218951-2219048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2220382-2220460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2220562-2220720:1:exon

position:2220562:1
position: 2220562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2224259-2225559:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X1
translation: MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(2133208..2133335,2184741..2184816,2191210..2191320,2195361..2195501,2206679..2206736,2209406..2209537,2213415..2213558,2214830..2214899,2215922..2215994,2218951..2219048,2220382..2220460,2220562..2220720,2224259..2224384)
location: region:2133208-2224384:1
so has part: feature:2133208-2133335:1:exon
so has part: feature:2184741-2184816:1:exon
so has part: feature:2191210-2191320:1:exon
so has part: feature:2195361-2195501:1:exon
so has part: feature:2206679-2206736:1:exon
so has part: feature:2209406-2209537:1:exon
so has part: feature:2213415-2213558:1:exon
so has part: feature:2214830-2214899:1:exon
so has part: feature:2215922-2215994:1:exon
so has part: feature:2218951-2219048:1:exon
so has part: feature:2220382-2220460:1:exon
so has part: feature:2220562-2220720:1:exon
so has part: feature:2224259-2224384:1:exon

XP_038617809.1
type: Protein
SIO_000068: ncbiprotein

position:2133208:1
position: 2133208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224384:1
position: 2224384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133208-2133335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2184741-2184816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191210-2191320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2195361-2195501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206679-2206736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2209406-2209537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213415-2213558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2214830-2214899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2215922-2215994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218951-2219048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2220382-2220460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2220562-2220720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2224259-2224384:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X2
translation: MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(2133208..2133335,2184741..2184816,2191210..2191320,2195361..2195501,2206679..2206736,2209406..2209537,2213415..2213558,2214830..2214899,2215922..2215994,2218951..2219048,2220382..2220460,2220565..2220720,2224259..2224384)
location: region:2133208-2224384:1
so has part: feature:2133208-2133335:1:exon
so has part: feature:2184741-2184816:1:exon
so has part: feature:2191210-2191320:1:exon
so has part: feature:2195361-2195501:1:exon
so has part: feature:2206679-2206736:1:exon
so has part: feature:2209406-2209537:1:exon
so has part: feature:2213415-2213558:1:exon
so has part: feature:2214830-2214899:1:exon
so has part: feature:2215922-2215994:1:exon
so has part: feature:2218951-2219048:1:exon
so has part: feature:2220382-2220460:1:exon
so has part: feature:2220565-2220720:1:exon
so has part: feature:2224259-2224384:1:exon

XP_038617811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2133208-2133335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2184741-2184816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191210-2191320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2195361-2195501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206679-2206736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2209406-2209537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213415-2213558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2214830-2214899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2215922-2215994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2218951-2219048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2220382-2220460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2220565-2220720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2224259-2224384:1:exon

LOC119941669
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941669
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2207564..2207695
location: region:2207564-2207695:1
so has part: feature:2207564-2207695:1:exon
subclass of: SO_0000578

119941669
type: Gene
SIO_000068: ncbigene

position:2207564:1
position: 2207564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207695:1
position: 2207695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2207564-2207695:1:exon

LOC119941669
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119941669
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455257.1
SIO_010081: LOC119941669
subclass of: SO_0000673
so part of: LOC119941669
location: 2207564..2207695
location: region:2207564-2207695:1
so has part: feature:2207564-2207695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2207564-2207695:1:exon

WASF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2229929..2318195
location: region:2229929-2318195:1
so has part: feature:2229929-2318195:1:exon
subclass of: SO_0000010

119941347
type: Gene
SIO_000068: ncbigene

position:2229929:1
position: 2229929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318195:1
position: 2318195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2229929-2318195:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: WASF3
product: WASP family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761745.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2229929..2229944,2237385..2237602,2283762..2283849,2286675..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2318195)
location: region:2229929-2318195:1
so has part: feature:2229929-2229944:1:exon
so has part: feature:2237385-2237602:1:exon
so has part: feature:2283762-2283849:1:exon
so has part: feature:2286675-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2318195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2229929-2229944:1:exon

position:2229944:1
position: 2229944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2237385-2237602:1:exon

position:2237385:1
position: 2237385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2237602:1
position: 2237602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2283762-2283849:1:exon

position:2283762:1
position: 2283762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283849:1
position: 2283849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2286675-2286796:1:exon

position:2286675:1
position: 2286675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286796:1
position: 2286796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2293590-2293732:1:exon

position:2293590:1
position: 2293590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2293732:1
position: 2293732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2297776-2297910:1:exon

position:2297776:1
position: 2297776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297910:1
position: 2297910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2300669-2300822:1:exon

position:2300669:1
position: 2300669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300822:1
position: 2300822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2304792-2304909:1:exon

position:2304792:1
position: 2304792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304909:1
position: 2304909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2307704-2307879:1:exon

position:2307704:1
position: 2307704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2307879:1
position: 2307879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2311337-2311600:1:exon

position:2311337:1
position: 2311337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2311600:1
position: 2311600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2312404-2312768:1:exon

position:2312404:1
position: 2312404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312768:1
position: 2312768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2314741-2318195:1:exon

position:2314741:1
position: 2314741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: WASF3
product: WASP family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761746.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2230172..2230187,2237385..2237602,2283762..2283849,2286675..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2318195)
location: region:2230172-2318195:1
so has part: feature:2230172-2230187:1:exon
so has part: feature:2237385-2237602:1:exon
so has part: feature:2283762-2283849:1:exon
so has part: feature:2286675-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2318195:1:exon

position:2230172:1
position: 2230172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2230172-2230187:1:exon

position:2230187:1
position: 2230187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2237385-2237602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2283762-2283849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2286675-2286796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2314741-2318195:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: WASF3
product: WASP family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761744.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2243820..2243881,2283762..2283849,2286675..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2318195)
location: region:2243820-2318195:1
so has part: feature:2243820-2243881:1:exon
so has part: feature:2283762-2283849:1:exon
so has part: feature:2286675-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2318195:1:exon

position:2243820:1
position: 2243820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2243820-2243881:1:exon

position:2243881:1
position: 2243881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2283762-2283849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2286675-2286796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2314741-2318195:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: WASF3
product: WASP family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761747.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2243820..2243881,2283762..2283849,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2318195)
location: region:2243820-2318195:1
so has part: feature:2243820-2243881:1:exon
so has part: feature:2283762-2283849:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2318195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243820-2243881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2283762-2283849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2314741-2318195:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MICNVGTAFQEFGSPFTLQQISSLGAMPLVKRNIEPRHLCRGTLPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTTQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDRKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVIGDTQQFGGGSQGPEHEHRPPSASMRHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQIIDFYNPSGPPPPPPPPPVIPSAQTAFVSPLQVPMAPFHPAGGAGPTFTAPPHPPSTGLVVPAPPPPGPPPGPPAAGASLSSSPMHGPPAAEPKPLGPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2286729..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2314898)
location: region:2286729-2314898:1
so has part: feature:2286729-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2314898:1:exon

XP_038617672.1
type: Protein
SIO_000068: ncbiprotein

position:2286729:1
position: 2286729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314898:1
position: 2314898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2286729-2286796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2314741-2314898:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MICNVGTAFQEFGSPFTLQQISSLGAMPLVKRNIEPRHLCRGTLPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTTQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDRKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVIGDTQQFGGGSQGPEHEHRPPSASMRHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQIIDFYNPSGPPPPPPPPPVIPSAQTAFVSPLQVPMAPFHPAGGAGPTFTAPPHPPSTGLVVPAPPPPGPPPGPPAAGASLSSSPMHGPPAAEPKPLGPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2286729..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2314898)
location: region:2286729-2314898:1
so has part: feature:2286729-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2314898:1:exon

XP_038617673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2286729-2286796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2314741-2314898:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MICNVGTAFQEFGSPFTLQQISSLGAMPLVKRNIEPRHLCRGTLPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTTQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDRKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVIGDTQQFGGGSQGPEHEHRPPSASMRHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQIIDFYNPSGPPPPPPPPPVIPSAQTAFVSPLQVPMAPFHPAGGAGPTFTAPPHPPSTGLVVPAPPPPGPPPGPPAAGASLSSSPMHGPPAAEPKPLGPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2286729..2286796,2293590..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2314898)
location: region:2286729-2314898:1
so has part: feature:2286729-2286796:1:exon
so has part: feature:2293590-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2314898:1:exon

XP_038617674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2286729-2286796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293590-2293732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2314741-2314898:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X2
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTTQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDRKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVIGDTQQFGGGSQGPEHEHRPPSASMRHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQIIDFYNPSGPPPPPPPPPVIPSAQTAFVSPLQVPMAPFHPAGGAGPTFTAPPHPPSTGLVVPAPPPPGPPPGPPAAGASLSSSPMHGPPAAEPKPLGPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(2293600..2293732,2297776..2297910,2300669..2300822,2304792..2304909,2307704..2307879,2311337..2311600,2312404..2312768,2314741..2314898)
location: region:2293600-2314898:1
so has part: feature:2293600-2293732:1:exon
so has part: feature:2297776-2297910:1:exon
so has part: feature:2300669-2300822:1:exon
so has part: feature:2304792-2304909:1:exon
so has part: feature:2307704-2307879:1:exon
so has part: feature:2311337-2311600:1:exon
so has part: feature:2312404-2312768:1:exon
so has part: feature:2314741-2314898:1:exon

XP_038617675.1
type: Protein
SIO_000068: ncbiprotein

position:2293600:1
position: 2293600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2293600-2293732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2297776-2297910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2300669-2300822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2304792-2304909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2307704-2307879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2311337-2311600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2312404-2312768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2314741-2314898:1:exon

USP12
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2385099..2425342)
location: region:2385099-2425342:-1
so has part: feature:2385099-2425342:-1:exon
subclass of: SO_0000010

119941190
type: Gene
SIO_000068: ncbigene

position:2385099:-1
position: 2385099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2425342:-1
position: 2425342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2385099-2425342:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: USP12
product: ubiquitin specific peptidase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761511.1
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2385099..2387572,2387809..2387887,2390693..2390890,2392457..2392540,2392920..2392996,2395497..2395726,2400650..2400863,2404862..2404942,2425221..2425342))
location: region:2385099-2425342:-1
so has part: feature:2425221-2425342:-1:exon
so has part: feature:2404862-2404942:-1:exon
so has part: feature:2400650-2400863:-1:exon
so has part: feature:2395497-2395726:-1:exon
so has part: feature:2392920-2392996:-1:exon
so has part: feature:2392457-2392540:-1:exon
so has part: feature:2390693-2390890:-1:exon
so has part: feature:2387809-2387887:-1:exon
so has part: feature:2385099-2387572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2425221-2425342:-1:exon

position:2425221:-1
position: 2425221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2404862-2404942:-1:exon

position:2404862:-1
position: 2404862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404942:-1
position: 2404942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2400650-2400863:-1:exon

position:2400650:-1
position: 2400650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2400863:-1
position: 2400863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2395497-2395726:-1:exon

position:2395497:-1
position: 2395497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395726:-1
position: 2395726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2392920-2392996:-1:exon

position:2392920:-1
position: 2392920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392996:-1
position: 2392996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2392457-2392540:-1:exon

position:2392457:-1
position: 2392457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392540:-1
position: 2392540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2390693-2390890:-1:exon

position:2390693:-1
position: 2390693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390890:-1
position: 2390890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2387809-2387887:-1:exon

position:2387809:-1
position: 2387809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387887:-1
position: 2387887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2385099-2387572:-1:exon

position:2387572:-1
position: 2387572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12
translation: MEILMTVYKLASVCTMGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLLNGSLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRD
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2387471..2387572,2387809..2387887,2390693..2390890,2392457..2392540,2392920..2392996,2395497..2395726,2400650..2400863,2404862..2404942,2425221..2425268))
location: region:2387471-2425268:-1
so has part: feature:2425221-2425268:-1:exon
so has part: feature:2404862-2404942:-1:exon
so has part: feature:2400650-2400863:-1:exon
so has part: feature:2395497-2395726:-1:exon
so has part: feature:2392920-2392996:-1:exon
so has part: feature:2392457-2392540:-1:exon
so has part: feature:2390693-2390890:-1:exon
so has part: feature:2387809-2387887:-1:exon
so has part: feature:2387471-2387572:-1:exon

XP_038617439.1
type: Protein
SIO_000068: ncbiprotein

position:2387471:-1
position: 2387471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2425268:-1
position: 2425268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2425221-2425268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404862-2404942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2400650-2400863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2395497-2395726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2392920-2392996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392457-2392540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2390693-2390890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2387809-2387887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2387471-2387572:-1:exon

LOC119941191
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2388357..2391016
location: region:2388357-2391016:1
so has part: feature:2388357-2391016:1:exon
subclass of: SO_0000011

119941191
type: Gene
SIO_000068: ncbigene

position:2388357:1
position: 2388357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391016:1
position: 2391016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2388357-2391016:1:exon

LOC119941191
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119941191
product: uncharacterized LOC119941191
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005455193.1
SIO_010081: LOC119941191
subclass of: SO_0000673
so part of: LOC119941191
location: join(2388357..2388797,2388946..2388973,2390851..2391016)
location: region:2388357-2391016:1
so has part: feature:2388357-2388797:1:exon
so has part: feature:2388946-2388973:1:exon
so has part: feature:2390851-2391016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2388357-2388797:1:exon

position:2388797:1
position: 2388797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2388946-2388973:1:exon

position:2388946:1
position: 2388946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388973:1
position: 2388973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2390851-2391016:1:exon

position:2390851:1
position: 2390851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL21
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2433703..2442132
location: region:2433703-2442132:1
so has part: feature:2433703-2442132:1:exon
subclass of: SO_0000010

119941388
type: Gene
SIO_000068: ncbigene

position:2433703:1
position: 2433703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442132:1
position: 2442132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2433703-2442132:1:exon

RPL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RPL21
product: ribosomal protein L21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038761806.1
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(2433703..2433740,2439074..2439152,2439542..2439603,2440520..2440632,2441047..2441197,2442005..2442132)
location: region:2433703-2442132:1
so has part: feature:2433703-2433740:1:exon
so has part: feature:2439074-2439152:1:exon
so has part: feature:2439542-2439603:1:exon
so has part: feature:2440520-2440632:1:exon
so has part: feature:2441047-2441197:1:exon
so has part: feature:2442005-2442132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2433703-2433740:1:exon

position:2433740:1
position: 2433740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2439074-2439152:1:exon

position:2439074:1
position: 2439074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439152:1
position: 2439152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2439542-2439603:1:exon

position:2439542:1
position: 2439542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439603:1
position: 2439603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2440520-2440632:1:exon

position:2440520:1
position: 2440520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440632:1
position: 2440632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2441047-2441197:1:exon

position:2441047:1
position: 2441047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2441197:1
position: 2441197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2442005-2442132:1:exon

position:2442005:1
position: 2442005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L21
translation: MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQQGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGIWVELKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(2439086..2439152,2439542..2439603,2440520..2440632,2441047..2441197,2442005..2442094)
location: region:2439086-2442094:1
so has part: feature:2439086-2439152:1:exon
so has part: feature:2439542-2439603:1:exon
so has part: feature:2440520-2440632:1:exon
so has part: feature:2441047-2441197:1:exon
so has part: feature:2442005-2442094:1:exon

XP_038617734.1
type: Protein
SIO_000068: ncbiprotein

position:2439086:1
position: 2439086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442094:1
position: 2442094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2439086-2439152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2439542-2439603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2440520-2440632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2441047-2441197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2442005-2442094:1:exon

LOC119941692
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941692
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2440342..2440420
location: region:2440342-2440420:1
so has part: feature:2440342-2440420:1:exon
subclass of: SO_0000578

119941692
type: Gene
SIO_000068: ncbigene

position:2440342:1
position: 2440342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440420:1
position: 2440420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2440342-2440420:1:exon

LOC119941692
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119941692
product: small nucleolar RNA SNORD102
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00187
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455277.1
SIO_010081: LOC119941692
subclass of: SO_0000673
so part of: LOC119941692
location: 2440342..2440420
location: region:2440342-2440420:1
so has part: feature:2440342-2440420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2440342-2440420:1:exon

LOC119941680
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119941680
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2440683..2440815
location: region:2440683-2440815:1
so has part: feature:2440683-2440815:1:exon
subclass of: SO_0000578

119941680
type: Gene
SIO_000068: ncbigene

position:2440683:1
position: 2440683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2440815:1
position: 2440815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2440683-2440815:1:exon

LOC119941680
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119941680
product: small nucleolar RNA SNORA27
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00443
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005455268.1
SIO_010081: LOC119941680
subclass of: SO_0000673
so part of: LOC119941680
location: 2440683..2440815
location: region:2440683-2440815:1
so has part: feature:2440683-2440815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2440683-2440815:1:exon

RASL11A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RASL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2452944..2457928
location: region:2452944-2457928:1
so has part: feature:2452944-2457928:1:exon
subclass of: SO_0000010

119941397
type: Gene
SIO_000068: ncbigene

position:2452944:1
position: 2452944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457928:1
position: 2457928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452944-2457928:1:exon

RASL11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RASL11A
product: RAS like family 11 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761819.1
SIO_010081: RASL11A
subclass of: SO_0000673
so part of: RASL11A
location: join(2452944..2453185,2455023..2455079,2455207..2455286,2457245..2457928)
location: region:2452944-2457928:1
so has part: feature:2452944-2453185:1:exon
so has part: feature:2455023-2455079:1:exon
so has part: feature:2455207-2455286:1:exon
so has part: feature:2457245-2457928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452944-2453185:1:exon

position:2453185:1
position: 2453185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2455023-2455079:1:exon

position:2455023:1
position: 2455023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455079:1
position: 2455079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2455207-2455286:1:exon

position:2455207:1
position: 2455207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455286:1
position: 2455286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2457245-2457928:1:exon

position:2457245:1
position: 2457245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RASL11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RASL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11A
translation: MRLPTMSGHCLLAPIPESSAARRDVKLAVLGSGRVGKSAIIVRFLTKRFIGDYEPNAGKLYSRLVHIEGDQLSLQIQDTPGCIQVREDSAQALESLSGCVRWAEGFLLVFSITDYSSYQAIRPLYQHIRKVHPDANVPVVIVGNKGDLLHARQVQASAAVQLADELGGAFLEVSTSEDYEGVCAVFRHLCREVGKLQGGGDKRRSSVTSRPKSPNVQDLKRRFKQALASKVRSPPLLG
SIO_010081: RASL11A
subclass of: SO_0000673
so part of: RASL11A
location: join(2453071..2453185,2455023..2455079,2455207..2455286,2457245..2457709)
location: region:2453071-2457709:1
so has part: feature:2453071-2453185:1:exon
so has part: feature:2455023-2455079:1:exon
so has part: feature:2455207-2455286:1:exon
so has part: feature:2457245-2457709:1:exon

XP_038617747.1
type: Protein
SIO_000068: ncbiprotein

position:2453071:1
position: 2453071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457709:1
position: 2457709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453071-2453185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2455023-2455079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2455207-2455286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2457245-2457709:1:exon

GTF3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GTF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2517694..2534318
location: region:2517694-2534318:1
so has part: feature:2517694-2534318:1:exon
subclass of: SO_0000010

119941232
type: Gene
SIO_000068: ncbigene

position:2517694:1
position: 2517694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534318:1
position: 2534318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517694-2534318:1:exon

GTF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GTF3A
product: general transcription factor IIIA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761596.1
SIO_010081: GTF3A
subclass of: SO_0000673
so part of: GTF3A
location: join(2517694..2517843,2519384..2519484,2522605..2522701,2526587..2526675,2528182..2528255,2529346..2529426,2531304..2531533,2533586..2533645,2534127..2534318)
location: region:2517694-2534318:1
so has part: feature:2517694-2517843:1:exon
so has part: feature:2519384-2519484:1:exon
so has part: feature:2522605-2522701:1:exon
so has part: feature:2526587-2526675:1:exon
so has part: feature:2528182-2528255:1:exon
so has part: feature:2529346-2529426:1:exon
so has part: feature:2531304-2531533:1:exon
so has part: feature:2533586-2533645:1:exon
so has part: feature:2534127-2534318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2517694-2517843:1:exon

position:2517843:1
position: 2517843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2519384-2519484:1:exon

position:2519384:1
position: 2519384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519484:1
position: 2519484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2522605-2522701:1:exon

position:2522605:1
position: 2522605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522701:1
position: 2522701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2526587-2526675:1:exon

position:2526587:1
position: 2526587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526675:1
position: 2526675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2528182-2528255:1:exon

position:2528182:1
position: 2528182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528255:1
position: 2528255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2529346-2529426:1:exon

position:2529346:1
position: 2529346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529426:1
position: 2529426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2531304-2531533:1:exon

position:2531304:1
position: 2531304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531533:1
position: 2531533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2533586-2533645:1:exon

position:2533586:1
position: 2533586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533645:1
position: 2533645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2534127-2534318:1:exon

position:2534127:1
position: 2534127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GTF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor IIIA
translation: MAAGEEEEQEATSSVAPLLAKRFICSFPSCSANYNKAWKLDAHLCKHTGERPFVCEHEGCGRAFIRDYHLSRHSLTHSGEKPFTCAATGCGQKFTTKSNLKKHVGRKHENQAKRYPCDFEGCDKSFKKHQQLKIHQCQHTKEPLFQCHHEGCGKHFAFPGGLKRHEKMHAGYSCRKGCSFVAKTWTELLKHMNESHKERLECETCGRAFKRKDYLKQHEKTHQAEREVCRCPREGCGRTYTTVFNLQSHILSFHEELRPFPCEYPGCGKRFAMKQSLTRHAVAHDPNRRNPKSQVKRPRSKRTLASRLSGYIPPRSGPGGDVEALLPGSDPGLPGGEVNTFPTVATLTLGE
SIO_010081: GTF3A
subclass of: SO_0000673
so part of: GTF3A
location: join(2517694..2517843,2519384..2519484,2522605..2522701,2526587..2526675,2528182..2528255,2529346..2529426,2531304..2531533,2533586..2533645,2534127..2534300)
location: region:2517694-2534300:1
so has part: feature:2517694-2517843:1:exon
so has part: feature:2519384-2519484:1:exon
so has part: feature:2522605-2522701:1:exon
so has part: feature:2526587-2526675:1:exon
so has part: feature:2528182-2528255:1:exon
so has part: feature:2529346-2529426:1:exon
so has part: feature:2531304-2531533:1:exon
so has part: feature:2533586-2533645:1:exon
so has part: feature:2534127-2534300:1:exon

XP_038617524.1
type: Protein
SIO_000068: ncbiprotein

position:2534300:1
position: 2534300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517694-2517843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2519384-2519484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2522605-2522701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2526587-2526675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2528182-2528255:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2529346-2529426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2531304-2531533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2533586-2533645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2534127-2534300:1:exon

MTIF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MTIF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2533783..2542510)
location: region:2533783-2542510:-1
so has part: feature:2533783-2542510:-1:exon
subclass of: SO_0000010

119941233
type: Gene
SIO_000068: ncbigene

position:2533783:-1
position: 2533783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542510:-1
position: 2542510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2533783-2542510:-1:exon

MTIF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTIF3
product: mitochondrial translational initiation factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761597.1
SIO_010081: MTIF3
subclass of: SO_0000673
so part of: MTIF3
location: complement(join(2533783..2534594,2537733..2537890,2540263..2540714,2542445..2542510))
location: region:2533783-2542510:-1
so has part: feature:2542445-2542510:-1:exon
so has part: feature:2540263-2540714:-1:exon
so has part: feature:2537733-2537890:-1:exon
so has part: feature:2533783-2534594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2542445-2542510:-1:exon

position:2542445:-1
position: 2542445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2540263-2540714:-1:exon

position:2540263:-1
position: 2540263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540714:-1
position: 2540714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2537733-2537890:-1:exon

position:2537733:-1
position: 2537733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537890:-1
position: 2537890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2533783-2534594:-1:exon

position:2534594:-1
position: 2534594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTIF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTIF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-3, mitochondrial
translation: MAALCLQKLLPGAPKAAVVHGGSCAGACVLRRLAPGPLWPVARTPLARPFCSADEAVGGEPRGKKMPSKPTISNVGRKIQHRVLRLLDERGEDLGAMHRADVIRLMEERGLRLVLLRPAADPPLYQLLTGSQIHEERLRLREESKAKPQTGPTQLKELIFSSSITQHDLHTKTKQIQDWIEKKHQVRITIKKGKFVKEEEHNLEGLFDEILQAVPILVTFTSKPRVIKDGRAATCVLRAMSKKEINEYKKTQEEKQGGRGLSPGKSGDEPCGSDGLRQ
SIO_010081: MTIF3
subclass of: SO_0000673
so part of: MTIF3
location: complement(join(2534367..2534594,2537733..2537890,2540263..2540713))
location: region:2534367-2540713:-1
so has part: feature:2540263-2540713:-1:exon
so has part: feature:2537733-2537890:-1:exon
so has part: feature:2534367-2534594:-1:exon

XP_038617525.1
type: Protein
SIO_000068: ncbiprotein

position:2534367:-1
position: 2534367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540713:-1
position: 2540713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540263-2540713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2537733-2537890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2534367-2534594:-1:exon

LNX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2579866..2614539)
location: region:2579866-2614539:-1
so has part: feature:2579866-2614539:-1:exon
subclass of: SO_0000010

119941592
type: Gene
SIO_000068: ncbigene

position:2579866:-1
position: 2579866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614539:-1
position: 2614539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579866-2614539:-1:exon

LNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LNX2
product: ligand of numb-protein X 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038762121.1
SIO_010081: LNX2
subclass of: SO_0000673
so part of: LNX2
location: complement(join(2579866..2581586,2585588..2585746,2587938..2588169,2591786..2591963,2596716..2596886,2601156..2601524,2602225..2602424,2603912..2604159,2614077..2614539))
location: region:2579866-2614539:-1
so has part: feature:2614077-2614539:-1:exon
so has part: feature:2603912-2604159:-1:exon
so has part: feature:2602225-2602424:-1:exon
so has part: feature:2601156-2601524:-1:exon
so has part: feature:2596716-2596886:-1:exon
so has part: feature:2591786-2591963:-1:exon
so has part: feature:2587938-2588169:-1:exon
so has part: feature:2585588-2585746:-1:exon
so has part: feature:2579866-2581586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2614077-2614539:-1:exon

position:2614077:-1
position: 2614077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2603912-2604159:-1:exon

position:2603912:-1
position: 2603912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2604159:-1
position: 2604159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2602225-2602424:-1:exon

position:2602225:-1
position: 2602225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2602424:-1
position: 2602424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2601156-2601524:-1:exon

position:2601156:-1
position: 2601156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2601524:-1
position: 2601524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2596716-2596886:-1:exon

position:2596716:-1
position: 2596716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596886:-1
position: 2596886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2591786-2591963:-1:exon

position:2591786:-1
position: 2591786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591963:-1
position: 2591963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2587938-2588169:-1:exon

position:2587938:-1
position: 2587938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2588169:-1
position: 2588169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2585588-2585746:-1:exon

position:2585588:-1
position: 2585588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2585746:-1
position: 2585746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2579866-2581586:-1:exon

position:2581586:-1
position: 2581586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2
translation: MGTASDEFVSAEQNSSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQPLDTPCGHTFCSKCIRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLPILCPFSAVCQDVMQRCDLEAHLKNRCPGASHRRVALERRKTSKAQTEIESENGPGIIDHSGTLSPDPDAAGTGTVPAERNFTSTSLPVWTDDPGFDNPAFEASTVADTTQQPPSLPEGEITTIEIHRSNPYIELGISIVGGNETPLINIVIQEVYRDGIIARDGRLLAGDQILQVNNFDISNVSHNYARAVLSQPCSTLHLTVLRERRFGSRLLNHPESGCPREESFHVTLHKRDSSEQLGIKLVRWTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKHGTPELAAQIIQASGERVNLTVARPGKAQTGTGSRESGMYNNNGSGGGGSNQIQHPTQSPYPGRPSSHRDLSQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLKASAASSAVALKALEVQVIEEQTQGDGEQPNPVSENEYDASWSPSWVMWLGLPSGLHSCRDVVLRRSNLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTVICWPGSLI
SIO_010081: LNX2
subclass of: SO_0000673
so part of: LNX2
location: complement(join(2581451..2581586,2585588..2585746,2587938..2588169,2591786..2591963,2596716..2596886,2601156..2601524,2602225..2602424,2603912..2604159,2614077..2614477))
location: region:2581451-2614477:-1
so has part: feature:2614077-2614477:-1:exon
so has part: feature:2603912-2604159:-1:exon
so has part: feature:2602225-2602424:-1:exon
so has part: feature:2601156-2601524:-1:exon
so has part: feature:2596716-2596886:-1:exon
so has part: feature:2591786-2591963:-1:exon
so has part: feature:2587938-2588169:-1:exon
so has part: feature:2585588-2585746:-1:exon
so has part: feature:2581451-2581586:-1:exon

XP_038618049.1
type: Protein
SIO_000068: ncbiprotein

position:2581451:-1
position: 2581451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614477:-1
position: 2614477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614077-2614477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603912-2604159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2602225-2602424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2601156-2601524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2596716-2596886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591786-2591963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2587938-2588169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2585588-2585746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581451-2581586:-1:exon

POLR1D
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: POLR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2671971..2692547
location: region:2671971-2692547:1
so has part: feature:2671971-2692547:1:exon
subclass of: SO_0000010

119941625
type: Gene
SIO_000068: ncbigene

position:2671971:1
position: 2671971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692547:1
position: 2692547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671971-2692547:1:exon

POLR1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: POLR1D
product: RNA polymerase I and III subunit D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038762169.1
SIO_010081: POLR1D
subclass of: SO_0000673
so part of: POLR1D
location: join(2671971..2672013,2678780..2678854,2691180..2692547)
location: region:2671971-2692547:1
so has part: feature:2671971-2672013:1:exon
so has part: feature:2678780-2678854:1:exon
so has part: feature:2691180-2692547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2671971-2672013:1:exon

position:2672013:1
position: 2672013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2678780-2678854:1:exon

position:2678780:1
position: 2678780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678854:1
position: 2678854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2691180-2692547:1:exon

position:2691180:1
position: 2691180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: POLR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POLR1D
translation: MAEDEELERKAVEELLKEAKRGKTRAETMGPMGWMKCPLAGANKRFLINTIKNTLPSQKEQDHELKRDNEESRSGRKEEEENPKKHRTHPYKPNVPPRQRVCPSPPRKRNSQEKYEKRSNTR
SIO_010081: POLR1D
subclass of: SO_0000673
so part of: POLR1D
location: join(2671988..2672013,2678780..2678854,2691180..2691447)
location: region:2671988-2691447:1
so has part: feature:2671988-2672013:1:exon
so has part: feature:2678780-2678854:1:exon
so has part: feature:2691180-2691447:1:exon

XP_038618097.1
type: Protein
SIO_000068: ncbiprotein

position:2671988:1
position: 2671988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691447:1
position: 2691447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671988-2672013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2678780-2678854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2691180-2691447:1:exon

GSX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GSX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2737845..2746696
location: region:2737845-2746696:1
so has part: feature:2737845-2746696:1:exon
subclass of: SO_0000010

119941627
type: Gene
SIO_000068: ncbigene

position:2737845:1
position: 2737845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746696:1
position: 2746696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2737845-2746696:1:exon

GSX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GSX1
product: GS homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038762171.1
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(2737845..2738247,2741110..2741467,2743244..2743286,2744381..2744409,2744599..2744723,2746305..2746391,2746629..2746696)
location: region:2737845-2746696:1
so has part: feature:2737845-2738247:1:exon
so has part: feature:2741110-2741467:1:exon
so has part: feature:2743244-2743286:1:exon
so has part: feature:2744381-2744409:1:exon
so has part: feature:2744599-2744723:1:exon
so has part: feature:2746305-2746391:1:exon
so has part: feature:2746629-2746696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2737845-2738247:1:exon

position:2738247:1
position: 2738247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2741110-2741467:1:exon

position:2741110:1
position: 2741110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741467:1
position: 2741467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2743244-2743286:1:exon

position:2743244:1
position: 2743244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2743286:1
position: 2743286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2744381-2744409:1:exon

position:2744381:1
position: 2744381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744409:1
position: 2744409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2744599-2744723:1:exon

position:2744599:1
position: 2744599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744723:1
position: 2744723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2746305-2746391:1:exon

position:2746305:1
position: 2746305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746391:1
position: 2746391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2746629-2746696:1:exon

position:2746629:1
position: 2746629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GSX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GSX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GS homeobox 1
translation: MPRSFLVDSLVLREAGEKKGPASSAPGPLFPYAVHPPPPGLHGLSPGACHSRKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFASQFCHSPLSRQHSSVASGVGHGPAAALYQTAYPLPDPRQFHCLSVDDTSSQLPSSKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGGGSHRAGPGGGTPHACKCSTLAPAKCSEDDDLPMSPSSSGKDERELTPYAQSPRCSRNRPSLHPLNCENVPFLGSRGEGGVVWPGQRLEGGGGTGEKDFGGPSRPSSLCPGPGLGSERYIEARGPVLREGSDTSGSPAPGRTVGKWEHRRGVSPQVSTALGPPEP
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(2737845..2738247,2741110..2741467,2743244..2743286,2744381..2744409,2744599..2744723,2746305..2746391,2746629..2746696)
location: region:2737845-2746696:1
so has part: feature:2737845-2738247:1:exon
so has part: feature:2741110-2741467:1:exon
so has part: feature:2743244-2743286:1:exon
so has part: feature:2744381-2744409:1:exon
so has part: feature:2744599-2744723:1:exon
so has part: feature:2746305-2746391:1:exon
so has part: feature:2746629-2746696:1:exon

XP_038618099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2737845-2738247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2741110-2741467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2743244-2743286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2744381-2744409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2744599-2744723:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2746305-2746391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2746629-2746696:1:exon

PDX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PDX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2799163..2809962
location: region:2799163-2809962:1
so has part: feature:2799163-2809962:1:exon
subclass of: SO_0000010

119941629
type: Gene
SIO_000068: ncbigene

position:2799163:1
position: 2799163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2809962:1
position: 2809962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2799163-2809962:1:exon

PDX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDX1
product: pancreatic and duodenal homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_038762172.1
SIO_010081: PDX1
subclass of: SO_0000673
so part of: PDX1
location: join(2799163..2799529,2809655..2809962)
location: region:2799163-2809962:1
so has part: feature:2799163-2799529:1:exon
so has part: feature:2809655-2809962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2799163-2799529:1:exon

position:2799529:1
position: 2799529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2809655-2809962:1:exon

position:2809655:1
position: 2809655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreas/duodenum homeobox protein 1
translation: MSAPDGHYAASPLYKEPCAFQDYSAGPPACLYTARPPPPPPPPPPYPAGAPDVSPYEVPPIGEEPGGSHLHAPRPHLPHPHAHIGPFPDGAEPGGLGEASRAQLPFPWMKSTKSHAWKGQWTGGVYAVESEESKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAALLRLTERHIKIWFQNRRMKWKKEEDKKKGAAAPKDPAGDPGAPPPGLDPRRPQEAR
SIO_010081: PDX1
subclass of: SO_0000673
so part of: PDX1
location: join(2799163..2799529,2809655..2809962)
location: region:2799163-2809962:1
so has part: feature:2799163-2799529:1:exon
so has part: feature:2809655-2809962:1:exon

XP_038618100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2799163-2799529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2809655-2809962:1:exon

CDX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CDX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2828046..2837265)
location: region:2828046-2837265:-1
so has part: feature:2828046-2837265:-1:exon
subclass of: SO_0000010

119941630
type: Gene
SIO_000068: ncbigene

position:2828046:-1
position: 2828046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837265:-1
position: 2837265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828046-2837265:-1:exon

CDX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CDX2
product: caudal type homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_038762173.1
SIO_010081: CDX2
subclass of: SO_0000673
so part of: CDX2
location: complement(join(2828046..2828243,2830111..2830256,2830934..2830987,2836992..2837265))
location: region:2828046-2837265:-1
so has part: feature:2836992-2837265:-1:exon
so has part: feature:2830934-2830987:-1:exon
so has part: feature:2830111-2830256:-1:exon
so has part: feature:2828046-2828243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2836992-2837265:-1:exon

position:2836992:-1
position: 2836992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2830934-2830987:-1:exon

position:2830934:-1
position: 2830934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830987:-1
position: 2830987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2830111-2830256:-1:exon

position:2830111:-1
position: 2830111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830256:-1
position: 2830256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2828046-2828243:-1:exon

position:2828243:-1
position: 2828243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CDX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-2
translation: MAGAPSPYPDFGGYHVGAPGAPGPAWPGPLGAPLRDDWGGYAPFGGPADYPAAPGLLTPAQDRQLPPAGGGPPPAPPDWSRKPPQPPTAGPAKGPVVAQPLPLVGSEAAVKTRTKDKYRVVYTDRQRLELEKEFHFSRYITIRRKAELAVLLGLSERQVKIWFQNRRAKERKMNKKKLQQLQQPQAQSQPDAMSSIPEPLSPVSSLQGSGPGPLGVLGPSVTQ
SIO_010081: CDX2
subclass of: SO_0000673
so part of: CDX2
location: complement(join(2828046..2828243,2830111..2830256,2830934..2830987,2836992..2837265))
location: region:2828046-2837265:-1
so has part: feature:2836992-2837265:-1:exon
so has part: feature:2830934-2830987:-1:exon
so has part: feature:2830111-2830256:-1:exon
so has part: feature:2828046-2828243:-1:exon

XP_038618101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2836992-2837265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2830934-2830987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2830111-2830256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2828046-2828243:-1:exon

URAD
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2841668..2853640)
location: region:2841668-2853640:-1
so has part: feature:2841668-2853640:-1:exon
subclass of: SO_0000010

119941526
type: Gene
SIO_000068: ncbigene

position:2841668:-1
position: 2841668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853640:-1
position: 2853640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841668-2853640:-1:exon

URAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: URAD
product: ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762013.1
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2841668..2841743,2847152..2847435,2853415..2853640))
location: region:2841668-2853640:-1
so has part: feature:2853415-2853640:-1:exon
so has part: feature:2847152-2847435:-1:exon
so has part: feature:2841668-2841743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853640:-1:exon

position:2853415:-1
position: 2853415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2847152-2847435:-1:exon

position:2847152:-1
position: 2847152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2847435:-1
position: 2847435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2841668-2841743:-1:exon

position:2841743:-1
position: 2841743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase isoform X2
translation: MDMRTVNAMDFGEFIEVFGNVVEKCPLAAAAVWGQRPFSSPADFERRLGDFIDSLPRSGQEGILRCHPDLAGPELQRGTLTKESQREQGQAGLTALQPEEKRQLAELNAQYRARFNFPFVMAARLSDKATVLRELARRARQPPKQELATAMDETWTVRGRRG
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2841714..2841743,2847152..2847435,2853415..2853589))
location: region:2841714-2853589:-1
so has part: feature:2853415-2853589:-1:exon
so has part: feature:2847152-2847435:-1:exon
so has part: feature:2841714-2841743:-1:exon

XP_038617941.1
type: Protein
SIO_000068: ncbiprotein

position:2841714:-1
position: 2841714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853589:-1
position: 2853589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2847152-2847435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841714-2841743:-1:exon

URAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: URAD
product: ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762014.1
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2841778..2841829,2847152..2847435,2853415..2853640))
location: region:2841778-2853640:-1
so has part: feature:2853415-2853640:-1:exon
so has part: feature:2847152-2847435:-1:exon
so has part: feature:2841778-2841829:-1:exon

position:2841778:-1
position: 2841778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2847152-2847435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841778-2841829:-1:exon

position:2841829:-1
position: 2841829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase isoform X3
translation: MDMRTVNAMDFGEFIEVFGNVVEKCPLAAAAVWGQRPFSSPADFERRLGDFIDSLPRSGQEGILRCHPDLAGPELQRGTLTKESQREQGQAGLTALQPEEKRQLAELNAQYRARFNFPFVMAARLSDKATVLRELARRARQPPKQELATAMDEVES
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2841818..2841829,2847152..2847435,2853415..2853589))
location: region:2841818-2853589:-1
so has part: feature:2853415-2853589:-1:exon
so has part: feature:2847152-2847435:-1:exon
so has part: feature:2841818-2841829:-1:exon

XP_038617942.1
type: Protein
SIO_000068: ncbiprotein

position:2841818:-1
position: 2841818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2847152-2847435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841818-2841829:-1:exon

URAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: URAD
product: ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038762012.1
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2846405..2847435,2853415..2853637))
location: region:2846405-2853637:-1
so has part: feature:2853415-2853637:-1:exon
so has part: feature:2846405-2847435:-1:exon

position:2846405:-1
position: 2846405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853637:-1
position: 2853637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2846405-2847435:-1:exon

URAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase isoform X1
translation: MDMRTVNAMDFGEFIEVFGNVVEKCPLAAAAVWGQRPFSSPADFERRLGDFIDSLPRSGQEGILRCHPDLAGPELQRGTLTKESQREQGQAGLTALQPEEKRQLAELNAQYRARFNFPFVMAARLSDKATVLRELARRARQPPKQELATAMDEVKKICHLRLEDIFADSAKL
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(2847092..2847435,2853415..2853589))
location: region:2847092-2853589:-1
so has part: feature:2853415-2853589:-1:exon
so has part: feature:2847092-2847435:-1:exon

XP_038617940.1
type: Protein
SIO_000068: ncbiprotein

position:2847092:-1
position: 2847092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853415-2853589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2847092-2847435:-1:exon

FLT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FLT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2858960..2898108)
location: region:2858960-2898108:-1
so has part: feature:2858960-2898108:-1:exon
subclass of: SO_0000010

119941457
type: Gene
SIO_000068: ncbigene

position:2858960:-1
position: 2858960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898108:-1
position: 2898108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858960-2898108:-1:exon

FLT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FLT3
product: fms related receptor tyrosine kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761903.1
SIO_010081: FLT3
subclass of: SO_0000673
so part of: FLT3
location: complement(join(2858960..2859420,2860807..2860912,2861583..2861682,2861772..2861883,2862847..2862969,2863702..2863829,2864624..2864697,2866150..2866303,2868978..2869088,2870024..2870128,2870976..2871108,2871198..2871304,2872682..2872863,2874041..2874149,2874914..2875017,2881943..2882111,2883590..2883743,2883829..2883968,2885114..2885241,2887471..2887588,2888819..2888934,2890952..2891163,2891616..2891740,2898033..2898108))
location: region:2858960-2898108:-1
so has part: feature:2898033-2898108:-1:exon
so has part: feature:2891616-2891740:-1:exon
so has part: feature:2890952-2891163:-1:exon
so has part: feature:2888819-2888934:-1:exon
so has part: feature:2887471-2887588:-1:exon
so has part: feature:2885114-2885241:-1:exon
so has part: feature:2883829-2883968:-1:exon
so has part: feature:2883590-2883743:-1:exon
so has part: feature:2881943-2882111:-1:exon
so has part: feature:2874914-2875017:-1:exon
so has part: feature:2874041-2874149:-1:exon
so has part: feature:2872682-2872863:-1:exon
so has part: feature:2871198-2871304:-1:exon
so has part: feature:2870976-2871108:-1:exon
so has part: feature:2870024-2870128:-1:exon
so has part: feature:2868978-2869088:-1:exon
so has part: feature:2866150-2866303:-1:exon
so has part: feature:2864624-2864697:-1:exon
so has part: feature:2863702-2863829:-1:exon
so has part: feature:2862847-2862969:-1:exon
so has part: feature:2861772-2861883:-1:exon
so has part: feature:2861583-2861682:-1:exon
so has part: feature:2860807-2860912:-1:exon
so has part: feature:2858960-2859420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2898033-2898108:-1:exon

position:2898033:-1
position: 2898033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2891616-2891740:-1:exon

position:2891616:-1
position: 2891616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891740:-1
position: 2891740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2890952-2891163:-1:exon

position:2890952:-1
position: 2890952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891163:-1
position: 2891163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2888819-2888934:-1:exon

position:2888819:-1
position: 2888819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888934:-1
position: 2888934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2887471-2887588:-1:exon

position:2887471:-1
position: 2887471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2887588:-1
position: 2887588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2885114-2885241:-1:exon

position:2885114:-1
position: 2885114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2885241:-1
position: 2885241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2883829-2883968:-1:exon

position:2883829:-1
position: 2883829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2883968:-1
position: 2883968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2883590-2883743:-1:exon

position:2883590:-1
position: 2883590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2883743:-1
position: 2883743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2881943-2882111:-1:exon

position:2881943:-1
position: 2881943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2882111:-1
position: 2882111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2874914-2875017:-1:exon

position:2874914:-1
position: 2874914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875017:-1
position: 2875017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2874041-2874149:-1:exon

position:2874041:-1
position: 2874041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874149:-1
position: 2874149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2872682-2872863:-1:exon

position:2872682:-1
position: 2872682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2872863:-1
position: 2872863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2871198-2871304:-1:exon

position:2871198:-1
position: 2871198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871304:-1
position: 2871304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2870976-2871108:-1:exon

position:2870976:-1
position: 2870976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871108:-1
position: 2871108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2870024-2870128:-1:exon

position:2870024:-1
position: 2870024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870128:-1
position: 2870128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2868978-2869088:-1:exon

position:2868978:-1
position: 2868978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869088:-1
position: 2869088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2866150-2866303:-1:exon

position:2866150:-1
position: 2866150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866303:-1
position: 2866303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2864624-2864697:-1:exon

position:2864624:-1
position: 2864624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864697:-1
position: 2864697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2863702-2863829:-1:exon

position:2863702:-1
position: 2863702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2863829:-1
position: 2863829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2862847-2862969:-1:exon

position:2862847:-1
position: 2862847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862969:-1
position: 2862969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2861772-2861883:-1:exon

position:2861772:-1
position: 2861772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861883:-1
position: 2861883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2861583-2861682:-1:exon

position:2861583:-1
position: 2861583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861682:-1
position: 2861682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2860807-2860912:-1:exon

position:2860807:-1
position: 2860807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2860912:-1
position: 2860912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2858960-2859420:-1:exon

position:2859420:-1
position: 2859420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FLT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein kinase FLT3
translation: MGAPRTRPAQALHRLLAVVISAMTVGSMTNQEPSGIRCVLLASKINSSSTWISSTSPMVSDQVLVEDLGCFLKHRDPTAAYQAIKPVEIGIFATATLQVTLNILGNVSCLWVSSHNPIDCQPDFDSENRTVLSLVISKMTETQAGEYLLSVHNGTTICTVLFAVSVKRNLRKPYFRKLEDQDSVDCVSDSFPEPVMEWLFCQTLSESCRKTSLAILKREEMVQHELLGTDIWCCARNELGRECTKLFTLDLNKAPQAPLPQFFLKIGEPLLIRCKAVHKDHRFGLTWKVENKELQEGSYFEISGYQSNRTMARILFAFVSSVGRSDAGHYTCSSSEDTSRTALVTVLEKGFINASNTKEDYEIDLNEEFCFAVKLRAYPQISCTWTFSQISLPCKNSNLEDEYSISQFCDHKHQPGEYIFHAENGDAHFTKIFTLSVRRKPQVTMQVSATQVSCYSSGYPSPSWVWKKCSEDSPNCTEEATDRVWKERSRVGGTALGPWASGSTMNVSQRERGFWFECCAHNSVGSSCQRFLNSPEAISVIQDNNSFYATIGFCLPFIAVLLLVISHKFKKQLRYESQLQMIQMTGPADNEYFYIDFREFEYDLKWEFPRENLEFGRVLGSGAFGKVVNATAYGISKTGVSIQVAVKMLKEKPDSSEKEALMSELKMMTHIGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFHRTWTEIFKQHNFSFYPRLHLHSSTRTHDFEGVLMNDNFDLIDGIPFYSEGDPDYENRKKQDEEEDFNVLTYEDLLCFSYQVARGMEFLELKLCVHRDLAARNILVTHGKVVKICDFGLARDILNDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSFGILLWEIFSLGVNPYPGIQVDTSFYRLIQSGFQMDPPFYATGEVYLVMQACWASDSSKRPPFSQLTSFLGCQLANAEAEVYQNMDSCISKQASGYQNRLSGPCLSPASG
SIO_010081: FLT3
subclass of: SO_0000673
so part of: FLT3
location: complement(join(2859328..2859420,2860807..2860912,2861583..2861682,2861772..2861883,2862847..2862969,2863702..2863829,2864624..2864697,2866150..2866303,2868978..2869088,2870024..2870128,2870976..2871108,2871198..2871304,2872682..2872863,2874041..2874149,2874914..2875017,2881943..2882111,2883590..2883743,2883829..2883968,2885114..2885241,2887471..2887588,2888819..2888934,2890952..2891163,2891616..2891740,2898033..2898081))
location: region:2859328-2898081:-1
so has part: feature:2898033-2898081:-1:exon
so has part: feature:2891616-2891740:-1:exon
so has part: feature:2890952-2891163:-1:exon
so has part: feature:2888819-2888934:-1:exon
so has part: feature:2887471-2887588:-1:exon
so has part: feature:2885114-2885241:-1:exon
so has part: feature:2883829-2883968:-1:exon
so has part: feature:2883590-2883743:-1:exon
so has part: feature:2881943-2882111:-1:exon
so has part: feature:2874914-2875017:-1:exon
so has part: feature:2874041-2874149:-1:exon
so has part: feature:2872682-2872863:-1:exon
so has part: feature:2871198-2871304:-1:exon
so has part: feature:2870976-2871108:-1:exon
so has part: feature:2870024-2870128:-1:exon
so has part: feature:2868978-2869088:-1:exon
so has part: feature:2866150-2866303:-1:exon
so has part: feature:2864624-2864697:-1:exon
so has part: feature:2863702-2863829:-1:exon
so has part: feature:2862847-2862969:-1:exon
so has part: feature:2861772-2861883:-1:exon
so has part: feature:2861583-2861682:-1:exon
so has part: feature:2860807-2860912:-1:exon
so has part: feature:2859328-2859420:-1:exon

XP_038617831.1
type: Protein
SIO_000068: ncbiprotein

position:2859328:-1
position: 2859328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898081:-1
position: 2898081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898033-2898081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2891616-2891740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890952-2891163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888819-2888934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2887471-2887588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2885114-2885241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2883829-2883968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2883590-2883743:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2881943-2882111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2874914-2875017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2874041-2874149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2872682-2872863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2871198-2871304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2870976-2871108:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2870024-2870128:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2868978-2869088:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2866150-2866303:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2864624-2864697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2863702-2863829:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2862847-2862969:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2861772-2861883:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2861583-2861682:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2860807-2860912:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2859328-2859420:-1:exon

PAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2913939..2992220
location: region:2913939-2992220:1
so has part: feature:2913939-2992220:1:exon
subclass of: SO_0000010

119941407
type: Gene
SIO_000068: ncbigene

position:2913939:1
position: 2913939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2992220:1
position: 2992220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2913939-2992220:1:exon

PAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PAN3
product: poly(A) specific ribonuclease subunit PAN3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761828.1
SIO_010081: PAN3
subclass of: SO_0000673
so part of: PAN3
location: join(2913939..2914200,2924597..2924718,2927395..2927461,2928691..2928761,2938649..2938810,2947326..2947476,2962105..2962352,2963965..2964069,2965475..2965532,2967603..2967764,2968057..2968173,2968266..2968367,2974477..2974642,2974981..2975068,2977473..2977612,2979240..2979369,2982222..2982286,2984448..2984586,2987387..2989389)
location: region:2913939-2989389:1
so has part: feature:2913939-2914200:1:exon
so has part: feature:2924597-2924718:1:exon
so has part: feature:2927395-2927461:1:exon
so has part: feature:2928691-2928761:1:exon
so has part: feature:2938649-2938810:1:exon
so has part: feature:2947326-2947476:1:exon
so has part: feature:2962105-2962352:1:exon
so has part: feature:2963965-2964069:1:exon
so has part: feature:2965475-2965532:1:exon
so has part: feature:2967603-2967764:1:exon
so has part: feature:2968057-2968173:1:exon
so has part: feature:2968266-2968367:1:exon
so has part: feature:2974477-2974642:1:exon
so has part: feature:2974981-2975068:1:exon
so has part: feature:2977473-2977612:1:exon
so has part: feature:2979240-2979369:1:exon
so has part: feature:2982222-2982286:1:exon
so has part: feature:2984448-2984586:1:exon
so has part: feature:2987387-2989389:1:exon

position:2989389:1
position: 2989389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2913939-2914200:1:exon

position:2914200:1
position: 2914200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2924597-2924718:1:exon

position:2924597:1
position: 2924597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924718:1
position: 2924718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2927395-2927461:1:exon

position:2927395:1
position: 2927395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927461:1
position: 2927461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2928691-2928761:1:exon

position:2928691:1
position: 2928691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2928761:1
position: 2928761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2938649-2938810:1:exon

position:2938649:1
position: 2938649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938810:1
position: 2938810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2947326-2947476:1:exon

position:2947326:1
position: 2947326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947476:1
position: 2947476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition