Tachyglossus aculeatus isolate mTacAcu1 chromosome 19, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome 19, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052084.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052084.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027618.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 40089708
topology: linear
so has quality: SO_0000987
location: 1..40089708
location: region:1-40089708:1
RO_0002162: 9261

NC_052084
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40089708:1
position: 40089708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-40089708:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: 19
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

PSMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7461..14614)
location: region:7461-14614:-1
so has part: feature:7461-14614:-1:exon
subclass of: SO_0000010

119940802
type: Gene
SIO_000068: ncbigene

position:7461:-1
position: 7461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14614:-1
position: 14614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7461-14614:-1:exon

PSMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PSMB1
product: proteasome 20S subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761134.1
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: complement(join(7461..7772,8786..8892,9520..9649,9823..9904,10504..10611,14467..14614))
location: region:7461-14614:-1
so has part: feature:14467-14614:-1:exon
so has part: feature:10504-10611:-1:exon
so has part: feature:9823-9904:-1:exon
so has part: feature:9520-9649:-1:exon
so has part: feature:8786-8892:-1:exon
so has part: feature:7461-7772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14467-14614:-1:exon

position:14467:-1
position: 14467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10504-10611:-1:exon

position:10504:-1
position: 10504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10611:-1
position: 10611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9823-9904:-1:exon

position:9823:-1
position: 9823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9904:-1
position: 9904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9520-9649:-1:exon

position:9520:-1
position: 9520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9649:-1
position: 9649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8786-8892:-1:exon

position:8786:-1
position: 8786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8892:-1
position: 8892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7461-7772:-1:exon

position:7772:-1
position: 7772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-1
translation: MLSAFAAPPEPSTSLAGPVQLRFSPYSFNGGTVLAIAGEDFSIVASDTRLSESYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNVEHLPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIREETISLRRD
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: complement(join(7587..7772,8786..8892,9520..9649,9823..9904,10504..10611,14467..14558))
location: region:7587-14558:-1
so has part: feature:14467-14558:-1:exon
so has part: feature:10504-10611:-1:exon
so has part: feature:9823-9904:-1:exon
so has part: feature:9520-9649:-1:exon
so has part: feature:8786-8892:-1:exon
so has part: feature:7587-7772:-1:exon

XP_038617062.1
type: Protein
SIO_000068: ncbiprotein

position:7587:-1
position: 7587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14558:-1
position: 14558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14467-14558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10504-10611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9823-9904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9520-9649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8786-8892:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7587-7772:-1:exon

LOC119940808
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119940808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15962..28541
location: region:15962-28541:1
so has part: feature:15962-28541:1:exon
subclass of: SO_0000010

119940808
type: Gene
SIO_000068: ncbigene

position:15962:1
position: 15962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28541:1
position: 28541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15962-28541:1:exon

LOC119940808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119940808
product: TATA-box-binding protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761147.1
SIO_010081: LOC119940808
subclass of: SO_0000673
so part of: LOC119940808
location: join(15962..16020,23289..23458,24409..24762,25964..26051,27066..27157,27554..27721,28064..28158,28271..28541)
location: region:15962-28541:1
so has part: feature:15962-16020:1:exon
so has part: feature:23289-23458:1:exon
so has part: feature:24409-24762:1:exon
so has part: feature:25964-26051:1:exon
so has part: feature:27066-27157:1:exon
so has part: feature:27554-27721:1:exon
so has part: feature:28064-28158:1:exon
so has part: feature:28271-28541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15962-16020:1:exon

position:16020:1
position: 16020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23289-23458:1:exon

position:23289:1
position: 23289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23458:1
position: 23458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24409-24762:1:exon

position:24409:1
position: 24409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24762:1
position: 24762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25964-26051:1:exon

position:25964:1
position: 25964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26051:1
position: 26051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27066-27157:1:exon

position:27066:1
position: 27066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27157:1
position: 27157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27554-27721:1:exon

position:27554:1
position: 27554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27721:1
position: 27721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:28064-28158:1:exon

position:28064:1
position: 28064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28158:1
position: 28158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:28271-28541:1:exon

position:28271:1
position: 28271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119940808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119940808
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TATA-box-binding protein-like
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSSNSLSLLEEQQRQQQQQQQQQQQQQQQQAATAQPAPQGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: LOC119940808
subclass of: SO_0000673
so part of: LOC119940808
location: join(23405..23458,24409..24762,25964..26051,27066..27157,27554..27721,28064..28158,28271..28350)
location: region:23405-28350:1
so has part: feature:23405-23458:1:exon
so has part: feature:24409-24762:1:exon
so has part: feature:25964-26051:1:exon
so has part: feature:27066-27157:1:exon
so has part: feature:27554-27721:1:exon
so has part: feature:28064-28158:1:exon
so has part: feature:28271-28350:1:exon

XP_038617075.1
type: Protein
SIO_000068: ncbiprotein

position:23405:1
position: 23405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28350:1
position: 28350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23405-23458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24409-24762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25964-26051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27066-27157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27554-27721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28064-28158:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28271-28350:1:exon

PDCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28536..34000)
location: region:28536-34000:-1
so has part: feature:28536-34000:-1:exon
subclass of: SO_0000010

119940807
type: Gene
SIO_000068: ncbigene

position:28536:-1
position: 28536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34000:-1
position: 34000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28536-34000:-1:exon

PDCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDCD2
product: programmed cell death 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761145.1
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: complement(join(28536..29138,29431..29544,29791..29894,30323..30475,31441..31692,33715..34000))
location: region:28536-34000:-1
so has part: feature:33715-34000:-1:exon
so has part: feature:31441-31692:-1:exon
so has part: feature:30323-30475:-1:exon
so has part: feature:29791-29894:-1:exon
so has part: feature:29431-29544:-1:exon
so has part: feature:28536-29138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33715-34000:-1:exon

position:33715:-1
position: 33715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31441-31692:-1:exon

position:31441:-1
position: 31441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31692:-1
position: 31692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30323-30475:-1:exon

position:30323:-1
position: 30323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30475:-1
position: 30475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29791-29894:-1:exon

position:29791:-1
position: 29791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29894:-1
position: 29894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:29431-29544:-1:exon

position:29431:-1
position: 29431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29544:-1
position: 29544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28536-29138:-1:exon

position:29138:-1
position: 29138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2
translation: MAGPGPGPLELGFAELAPGPGRRSGPSFRSKVGGRPWWLGAVGLPGPGGLACPACRRPLAFLLQLYAPRPAPAHAFHRALFLFACRHPDCCNAFRVFRNQLPRKNDFYPYDPPPEEPPPPPPGAAAGVCLQLGSGVWLCRVCGCPGPKACARCHRAHYCSKDHQVLDWKLGHKQACPQPEGPDGAIPDHQFLFPEYEIVIEAEEPDSEGEEDGDVDGVEDCADPELPGSLGEAPEAVLDALAKHESREDRIFQQFKAKTAREPEQIIRYGRGVDPLWISGEGIPQEKDIPPCPCGARREFEFQVMPQLLNYLKADRLGTSLDWGVLAVYTCARSCSLAAAHYTEEFIWKQDVGSA
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: complement(join(28980..29138,29431..29544,29791..29894,30323..30475,31441..31692,33715..34000))
location: region:28980-34000:-1
so has part: feature:33715-34000:-1:exon
so has part: feature:31441-31692:-1:exon
so has part: feature:30323-30475:-1:exon
so has part: feature:29791-29894:-1:exon
so has part: feature:29431-29544:-1:exon
so has part: feature:28980-29138:-1:exon

XP_038617073.1
type: Protein
SIO_000068: ncbiprotein

position:28980:-1
position: 28980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33715-34000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31441-31692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30323-30475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29791-29894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29431-29544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28980-29138:-1:exon

GNPAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(39568..55112)
location: region:39568-55112:-1
so has part: feature:39568-55112:-1:exon
subclass of: SO_0000010

119940950
type: Gene
SIO_000068: ncbigene

position:39568:-1
position: 39568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55112:-1
position: 55112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39568-55112:-1:exon

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761360.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(39568..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50916,55076..55112))
location: region:39568-55112:-1
so has part: feature:55076-55112:-1:exon
so has part: feature:50725-50916:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:39568-40073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55076-55112:-1:exon

position:55076:-1
position: 55076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50725-50916:-1:exon

position:50725:-1
position: 50725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50916:-1
position: 50916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49948-50124:-1:exon

position:49948:-1
position: 49948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50124:-1
position: 50124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47988-48117:-1:exon

position:47988:-1
position: 47988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48117:-1
position: 48117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47627-47754:-1:exon

position:47627:-1
position: 47627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47754:-1
position: 47754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47287-47362:-1:exon

position:47287:-1
position: 47287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47362:-1
position: 47362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44985-45136:-1:exon

position:44985:-1
position: 44985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45136:-1
position: 45136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44576-44706:-1:exon

position:44576:-1
position: 44576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44706:-1
position: 44706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44155-44378:-1:exon

position:44155:-1
position: 44155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44378:-1
position: 44378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42715-42966:-1:exon

position:42715:-1
position: 42715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42966:-1
position: 42966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42488-42567:-1:exon

position:42488:-1
position: 42488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42567:-1
position: 42567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:41767-41907:-1:exon

position:41767:-1
position: 41767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41907:-1
position: 41907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:41348-41447:-1:exon

position:41348:-1
position: 41348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41447:-1
position: 41447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:41135-41228:-1:exon

position:41135:-1
position: 41135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41228:-1
position: 41228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:40732-40793:-1:exon

position:40732:-1
position: 40732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40793:-1
position: 40793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:39568-40073:-1:exon

position:40073:-1
position: 40073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761359.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(39568..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50940,55076..55110))
location: region:39568-55110:-1
so has part: feature:55076-55110:-1:exon
so has part: feature:50725-50940:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:39568-40073:-1:exon

position:55110:-1
position: 55110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55076-55110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50725-50940:-1:exon

position:50940:-1
position: 50940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49948-50124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47988-48117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47627-47754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47287-47362:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44985-45136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44576-44706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44155-44378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42715-42966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42488-42567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41767-41907:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41348-41447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:41135-41228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:40732-40793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:39568-40073:-1:exon

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761361.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(39569..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50916,51736..51931))
location: region:39569-51931:-1
so has part: feature:51736-51931:-1:exon
so has part: feature:50725-50916:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:39569-40073:-1:exon

position:39569:-1
position: 39569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51931:-1
position: 51931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51736-51931:-1:exon

position:51736:-1
position: 51736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50725-50916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49948-50124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47988-48117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47627-47754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47287-47362:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44985-45136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44576-44706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44155-44378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42715-42966:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42488-42567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41767-41907:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41348-41447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:41135-41228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:40732-40793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:39569-40073:-1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase
translation: MLEERRQSSDLRYALKCYTPVLYKGLNPCKPWAIKTAVLRSEEVHYVVKQLSRETGQSVQSIQEAAVQILEEMGHSLRLGAIRFFAFSLTKIFKCLFRKVCVNQDGIQRLQQAIQEQPVVLLPSHRSYVDFLLLSYILYTYDLPVPVIAAGVDFLGMKVMGELLRRAGAFFMRRSFGGDKLYWAVFSEYVKTMLRNGYAPIEFFLEGTRSRTAKTLTPKLGLLNIVMEPFFKREVFDTYLVPISISYDRILEEALYSHELLGVPKPKESTTGLLKARQVLCQDFGCIHVYFAAPLSLRSLAAGRMERSPYNLVPRHVPQKPSEEMLAFANDVAFRVELLQIENMALSPWALVATVLLQNPPALDLAVLVEKTFWLKGLIQAFGGFLVWSDDLSAARAVRDSLTLHANVARLSADGLVSVSGCEEPEPGPSQGALFQRAVPFLTCAIYRNHLANLCVRPALVALALTLATDSRKDDVYGCFSFLRDVFSDEFIFFPGRAVEDFEDGCFLLGRCRAVRVTSSHILPAAASEAVLPFLTAMFRPFVEGYQIACRYLWEEASEAFTEKQFVPGVRAFASQLIEAGSSQCYEALSSDMQKNALAALVRLGAVLKSRTASGITYNTDREAVSKVEGMLGSRIPIGRPLTAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(40030..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50874))
location: region:40030-50874:-1
so has part: feature:50725-50874:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:40030-40073:-1:exon

XP_038617287.1
type: Protein
SIO_000068: ncbiprotein

position:40030:-1
position: 40030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50874:-1
position: 50874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50725-50874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49948-50124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47988-48117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47627-47754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47287-47362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44985-45136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44576-44706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44155-44378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42715-42966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42488-42567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41767-41907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41348-41447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41135-41228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40732-40793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:40030-40073:-1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase
translation: MLEERRQSSDLRYALKCYTPVLYKGLNPCKPWAIKTAVLRSEEVHYVVKQLSRETGQSVQSIQEAAVQILEEMGHSLRLGAIRFFAFSLTKIFKCLFRKVCVNQDGIQRLQQAIQEQPVVLLPSHRSYVDFLLLSYILYTYDLPVPVIAAGVDFLGMKVMGELLRRAGAFFMRRSFGGDKLYWAVFSEYVKTMLRNGYAPIEFFLEGTRSRTAKTLTPKLGLLNIVMEPFFKREVFDTYLVPISISYDRILEEALYSHELLGVPKPKESTTGLLKARQVLCQDFGCIHVYFAAPLSLRSLAAGRMERSPYNLVPRHVPQKPSEEMLAFANDVAFRVELLQIENMALSPWALVATVLLQNPPALDLAVLVEKTFWLKGLIQAFGGFLVWSDDLSAARAVRDSLTLHANVARLSADGLVSVSGCEEPEPGPSQGALFQRAVPFLTCAIYRNHLANLCVRPALVALALTLATDSRKDDVYGCFSFLRDVFSDEFIFFPGRAVEDFEDGCFLLGRCRAVRVTSSHILPAAASEAVLPFLTAMFRPFVEGYQIACRYLWEEASEAFTEKQFVPGVRAFASQLIEAGSSQCYEALSSDMQKNALAALVRLGAVLKSRTASGITYNTDREAVSKVEGMLGSRIPIGRPLTAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(40030..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50874))
location: region:40030-50874:-1
so has part: feature:50725-50874:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:40030-40073:-1:exon

XP_038617288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50725-50874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49948-50124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47988-48117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47627-47754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47287-47362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44985-45136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44576-44706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44155-44378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42715-42966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42488-42567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41767-41907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41348-41447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41135-41228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40732-40793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:40030-40073:-1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase
translation: MLEERRQSSDLRYALKCYTPVLYKGLNPCKPWAIKTAVLRSEEVHYVVKQLSRETGQSVQSIQEAAVQILEEMGHSLRLGAIRFFAFSLTKIFKCLFRKVCVNQDGIQRLQQAIQEQPVVLLPSHRSYVDFLLLSYILYTYDLPVPVIAAGVDFLGMKVMGELLRRAGAFFMRRSFGGDKLYWAVFSEYVKTMLRNGYAPIEFFLEGTRSRTAKTLTPKLGLLNIVMEPFFKREVFDTYLVPISISYDRILEEALYSHELLGVPKPKESTTGLLKARQVLCQDFGCIHVYFAAPLSLRSLAAGRMERSPYNLVPRHVPQKPSEEMLAFANDVAFRVELLQIENMALSPWALVATVLLQNPPALDLAVLVEKTFWLKGLIQAFGGFLVWSDDLSAARAVRDSLTLHANVARLSADGLVSVSGCEEPEPGPSQGALFQRAVPFLTCAIYRNHLANLCVRPALVALALTLATDSRKDDVYGCFSFLRDVFSDEFIFFPGRAVEDFEDGCFLLGRCRAVRVTSSHILPAAASEAVLPFLTAMFRPFVEGYQIACRYLWEEASEAFTEKQFVPGVRAFASQLIEAGSSQCYEALSSDMQKNALAALVRLGAVLKSRTASGITYNTDREAVSKVEGMLGSRIPIGRPLTAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(40030..40073,40732..40793,41135..41228,41348..41447,41767..41907,42488..42567,42715..42966,44155..44378,44576..44706,44985..45136,47287..47362,47627..47754,47988..48117,49948..50124,50725..50874))
location: region:40030-50874:-1
so has part: feature:50725-50874:-1:exon
so has part: feature:49948-50124:-1:exon
so has part: feature:47988-48117:-1:exon
so has part: feature:47627-47754:-1:exon
so has part: feature:47287-47362:-1:exon
so has part: feature:44985-45136:-1:exon
so has part: feature:44576-44706:-1:exon
so has part: feature:44155-44378:-1:exon
so has part: feature:42715-42966:-1:exon
so has part: feature:42488-42567:-1:exon
so has part: feature:41767-41907:-1:exon
so has part: feature:41348-41447:-1:exon
so has part: feature:41135-41228:-1:exon
so has part: feature:40732-40793:-1:exon
so has part: feature:40030-40073:-1:exon

XP_038617289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50725-50874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49948-50124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47988-48117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47627-47754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47287-47362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44985-45136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44576-44706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44155-44378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42715-42966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42488-42567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41767-41907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41348-41447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41135-41228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40732-40793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:40030-40073:-1:exon

C19H1orf131
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: C19H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 50873..60803
location: region:50873-60803:1
so has part: feature:50873-60803:1:exon
subclass of: SO_0000010

119940963
type: Gene
SIO_000068: ncbigene

position:50873:1
position: 50873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60803:1
position: 60803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50873-60803:1:exon

C19H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: C19H1orf131
product: chromosome 19 C1orf131 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761378.1
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(50873..50977,54963..55159,55306..55394,57741..58096,58472..58528,59167..59262,59354..59440,59775..59821,60119..60803)
location: region:50873-60803:1
so has part: feature:50873-50977:1:exon
so has part: feature:54963-55159:1:exon
so has part: feature:55306-55394:1:exon
so has part: feature:57741-58096:1:exon
so has part: feature:58472-58528:1:exon
so has part: feature:59167-59262:1:exon
so has part: feature:59354-59440:1:exon
so has part: feature:59775-59821:1:exon
so has part: feature:60119-60803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50873-50977:1:exon

position:50977:1
position: 50977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54963-55159:1:exon

position:54963:1
position: 54963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55159:1
position: 55159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55306-55394:1:exon

position:55306:1
position: 55306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55394:1
position: 55394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57741-58096:1:exon

position:57741:1
position: 57741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58096:1
position: 58096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58472-58528:1:exon

position:58472:1
position: 58472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58528:1
position: 58528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59167-59262:1:exon

position:59167:1
position: 59167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59262:1
position: 59262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59354-59440:1:exon

position:59354:1
position: 59354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59440:1
position: 59440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:59775-59821:1:exon

position:59775:1
position: 59775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59821:1
position: 59821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60119-60803:1:exon

position:60119:1
position: 60119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: C19H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog
translation: MSSNSSHLLELPSFRWKDEAGGARRDHGLNPKPAHRDPHPRGGHARTPELGEPGSLPWQPAHRPLPLALAPPTEPREEEEEEAEEAEGVPEAEGPEAAMLGPEGGMEEEAAAPPGPARRLDTVLRGLYDLGETPERPQAKPKKRKESAGQREVALGLDGPGAGPDGPGAGPAAAKPGHRPKRTRHFFEELRGELQSVQGPGPGPAAPGAPEAPEGGSRPVPVVEFCSRRKQRQPPQPEAGGRPQAPAPQAKASVLKKQGEEPVFDLEKARLEVHRFGITGYGKGKERALERERAIMLGAKPPKREYVNYKVLQEMVKLKKAAKNEGSGAFGDPVQGPATLQQMERKPKKKYAPRVPFGSQTGQVGKFQNGMLLLSSQDIKKINSSRVVR
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(50873..50977,54963..55159,55306..55394,57741..58096,58472..58528,59167..59262,59354..59440,59775..59821,60119..60254)
location: region:50873-60254:1
so has part: feature:50873-50977:1:exon
so has part: feature:54963-55159:1:exon
so has part: feature:55306-55394:1:exon
so has part: feature:57741-58096:1:exon
so has part: feature:58472-58528:1:exon
so has part: feature:59167-59262:1:exon
so has part: feature:59354-59440:1:exon
so has part: feature:59775-59821:1:exon
so has part: feature:60119-60254:1:exon

XP_038617306.1
type: Protein
SIO_000068: ncbiprotein

position:60254:1
position: 60254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50873-50977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54963-55159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55306-55394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57741-58096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58472-58528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59167-59262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59354-59440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:59775-59821:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60119-60254:1:exon

TRIM67
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63597..79331)
location: region:63597-79331:-1
so has part: feature:63597-79331:-1:exon
subclass of: SO_0000010

119940873
type: Gene
SIO_000068: ncbigene

position:63597:-1
position: 63597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79331:-1
position: 79331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63597-79331:-1:exon

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TRIM67
product: tripartite motif containing 67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761243.1
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(63597..63711,64987..65149,65718..66021,66780..66918,68522..68667,70346..70505,70640..70750,74059..74181,74814..74909,77574..77786,77853..79331))
location: region:63597-79331:-1
so has part: feature:77853-79331:-1:exon
so has part: feature:77574-77786:-1:exon
so has part: feature:74814-74909:-1:exon
so has part: feature:74059-74181:-1:exon
so has part: feature:70640-70750:-1:exon
so has part: feature:70346-70505:-1:exon
so has part: feature:68522-68667:-1:exon
so has part: feature:66780-66918:-1:exon
so has part: feature:65718-66021:-1:exon
so has part: feature:64987-65149:-1:exon
so has part: feature:63597-63711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77853-79331:-1:exon

position:77853:-1
position: 77853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77574-77786:-1:exon

position:77574:-1
position: 77574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77786:-1
position: 77786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74814-74909:-1:exon

position:74814:-1
position: 74814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74909:-1
position: 74909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74059-74181:-1:exon

position:74059:-1
position: 74059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74181:-1
position: 74181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70640-70750:-1:exon

position:70640:-1
position: 70640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70750:-1
position: 70750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70346-70505:-1:exon

position:70346:-1
position: 70346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70505:-1
position: 70505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68522-68667:-1:exon

position:68522:-1
position: 68522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68667:-1
position: 68667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66780-66918:-1:exon

position:66780:-1
position: 66780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66918:-1
position: 66918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:65718-66021:-1:exon

position:65718:-1
position: 65718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66021:-1
position: 66021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:64987-65149:-1:exon

position:64987:-1
position: 64987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65149:-1
position: 65149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63597-63711:-1:exon

position:63711:-1
position: 63711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TRIM67
product: tripartite motif containing 67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761241.1
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(63597..63711,64987..65149,65718..66021,66780..66918,68522..68667,70346..70505,70640..70750,74059..74181,74814..74909,77574..79331))
location: region:63597-79331:-1
so has part: feature:77574-79331:-1:exon
so has part: feature:74814-74909:-1:exon
so has part: feature:74059-74181:-1:exon
so has part: feature:70640-70750:-1:exon
so has part: feature:70346-70505:-1:exon
so has part: feature:68522-68667:-1:exon
so has part: feature:66780-66918:-1:exon
so has part: feature:65718-66021:-1:exon
so has part: feature:64987-65149:-1:exon
so has part: feature:63597-63711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77574-79331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74814-74909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74059-74181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70640-70750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70346-70505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68522-68667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66780-66918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65718-66021:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64987-65149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63597-63711:-1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X2
translation: MEEELKCPVCGSLFREPLILPCSHNVCLPCARTIALRTPEGERTLPGPPAPEPGPDSAGPPAPAPGPGPGPGPDVADKLSLHSEADSGYGSCPPSLRSPNGVRVLPPGAPPAPPGPSGPSGPSGPSGSGPSGPSGPSGSGGSGPSGGSGSGSGSITCPQCHRSASLDPRGLRGFRRNRLLEAIVRRYRQARGPGRLGDGPGGGDGDDDGGGPGAPPAPPAPPCQLCERRPPEPAAALCQQCHLLYCAACQASCHPPRGPFAHHRLQQQQAHGGPGHGHGPGPGPARQAPACPDHDGETYSMYCNACRAPVCPRCLGDGPHAQHHLRPLAAAWRQHKAQLSQALNGVSDKAKEAKEFLVHLKDILQQIQENSLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKVVWEQINHCTLKLRQSTGLMEYCLEAIKENDPAGFLQVSDALITRVQLSQEQWVKGALEARVSADFDLTLDSEPLLQTIHQLDFIQMKRRMPPTPLLQLEKCCTRNNSVTLAWRTPALAPGPVEGYVLELDDGDGGQYREVYVGKETVCTIDGLHFNSTYNARVKAFNSSGFGPYSKTVVLQTSDVAWFTFDPNTAHRDIVLSNDNQTATCSSYDDRVVLGTAAFSKGVHYWQLHVDRYDSHPDPAFGVARANVAKDMMLGKDDRAWAMYVDSNRSWFMHRNSHTSRTEGGVGQGTTVGVLLDLNEHTLTFFINGQQQGPTAFDHVDGVFMPALSLNRNVQVTLHTGLEVPLDLAPVKPPSN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(63646..63711,64987..65149,65718..66021,66780..66918,68522..68667,70346..70505,70640..70750,74059..74181,74814..74909,77574..77786,77853..78647))
location: region:63646-78647:-1
so has part: feature:77853-78647:-1:exon
so has part: feature:77574-77786:-1:exon
so has part: feature:74814-74909:-1:exon
so has part: feature:74059-74181:-1:exon
so has part: feature:70640-70750:-1:exon
so has part: feature:70346-70505:-1:exon
so has part: feature:68522-68667:-1:exon
so has part: feature:66780-66918:-1:exon
so has part: feature:65718-66021:-1:exon
so has part: feature:64987-65149:-1:exon
so has part: feature:63646-63711:-1:exon

XP_038617171.1
type: Protein
SIO_000068: ncbiprotein

position:63646:-1
position: 63646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78647:-1
position: 78647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77853-78647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77574-77786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74814-74909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74059-74181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70640-70750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70346-70505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68522-68667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66780-66918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65718-66021:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64987-65149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63646-63711:-1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X1
translation: MEEELKCPVCGSLFREPLILPCSHNVCLPCARTIALRTPEGERTLPGPPAPEPGPDSAGPPAPAPGPGPGPGPDVADKLSLHSEADSGYGSCPPSLRSPNGVRVLPPGAPPAPPGPSGPSGPSGPSGSGPSGPSGPSGSGGSGPSGGSGSGSGSITCPQCHRSASLDPRGLRGFRRNRLLEAIVRRYRQARGPGRLGDGPGGGDGDDDGGGPGAPPAPPAPPCQLCERRPPEPAAALCQQCHLLYCAACQASCHPPRGPFAHHRLVALPAPPRQQQQQQQAQQQAQQQQQQAHGGPGHGHGPGPGPARQAPACPDHDGETYSMYCNACRAPVCPRCLGDGPHAQHHLRPLAAAWRQHKAQLSQALNGVSDKAKEAKEFLVHLKDILQQIQENSLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKVVWEQINHCTLKLRQSTGLMEYCLEAIKENDPAGFLQVSDALITRVQLSQEQWVKGALEARVSADFDLTLDSEPLLQTIHQLDFIQMKRRMPPTPLLQLEKCCTRNNSVTLAWRTPALAPGPVEGYVLELDDGDGGQYREVYVGKETVCTIDGLHFNSTYNARVKAFNSSGFGPYSKTVVLQTSDVAWFTFDPNTAHRDIVLSNDNQTATCSSYDDRVVLGTAAFSKGVHYWQLHVDRYDSHPDPAFGVARANVAKDMMLGKDDRAWAMYVDSNRSWFMHRNSHTSRTEGGVGQGTTVGVLLDLNEHTLTFFINGQQQGPTAFDHVDGVFMPALSLNRNVQVTLHTGLEVPLDLAPVKPPSN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(63646..63711,64987..65149,65718..66021,66780..66918,68522..68667,70346..70505,70640..70750,74059..74181,74814..74909,77574..78647))
location: region:63646-78647:-1
so has part: feature:77574-78647:-1:exon
so has part: feature:74814-74909:-1:exon
so has part: feature:74059-74181:-1:exon
so has part: feature:70640-70750:-1:exon
so has part: feature:70346-70505:-1:exon
so has part: feature:68522-68667:-1:exon
so has part: feature:66780-66918:-1:exon
so has part: feature:65718-66021:-1:exon
so has part: feature:64987-65149:-1:exon
so has part: feature:63646-63711:-1:exon

XP_038617169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77574-78647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74814-74909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74059-74181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70640-70750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70346-70505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68522-68667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66780-66918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65718-66021:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64987-65149:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63646-63711:-1:exon

FAM89A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FAM89A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <88628..95042
location: region:88628-95042:1
so has part: feature:88628-95042:1:exon
subclass of: SO_0000010

119940965
type: Gene
SIO_000068: ncbigene

position:88628:1
position: 88628
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:95042:1
position: 95042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88628-95042:1:exon

FAM89A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FAM89A
product: family with sequence similarity 89 member A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761380.1
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: join(<88628..88832,94012..95042)
location: region:88628-95042:1
so has part: feature:88628-88832:1:exon
so has part: feature:94012-95042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88628-88832:1:exon

position:88832:1
position: 88832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94012-95042:1:exon

position:94012:1
position: 94012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM89A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FAM89A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein FAM89A
translation: GPGGPGGLPPLPKSLSGLLHSALGGAGGWRRLDRLYAQKSRIQDELXAGPGPPKPPNLDAALALLRKEMVGLRQLDMSLLCQLYSLYEAVQEYRGACQAACSPDGSDTVGHAFFDEEEEFFPPNGGDQDPRPNFSLPSGAFSSDIWIRDSV
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: join(<88628..88832,94012..94260)
location: region:88628-94260:1
so has part: feature:88628-88832:1:exon
so has part: feature:94012-94260:1:exon

XP_038617308.1
type: Protein
SIO_000068: ncbiprotein

position:94260:1
position: 94260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88628-88832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94012-94260:1:exon

ARV1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(98990..107994)
location: region:98990-107994:-1
so has part: feature:98990-107994:-1:exon
subclass of: SO_0000010

119940798
type: Gene
SIO_000068: ncbigene

position:98990:-1
position: 98990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107994:-1
position: 107994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98990-107994:-1:exon

ARV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARV1
product: ARV1 homolog, fatty acid homeostasis modulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761130.1
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(98990..99769,102110..102334,102942..103095,105280..105399,107873..107994))
location: region:98990-107994:-1
so has part: feature:107873-107994:-1:exon
so has part: feature:105280-105399:-1:exon
so has part: feature:102942-103095:-1:exon
so has part: feature:102110-102334:-1:exon
so has part: feature:98990-99769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107873-107994:-1:exon

position:107873:-1
position: 107873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105280-105399:-1:exon

position:105280:-1
position: 105280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105399:-1
position: 105399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102942-103095:-1:exon

position:102942:-1
position: 102942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103095:-1
position: 103095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102110-102334:-1:exon

position:102110:-1
position: 102110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102334:-1
position: 102334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98990-99769:-1:exon

position:99769:-1
position: 99769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1
translation: MAAARYRCIECHREATELYRDYNRGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTQINIHGKLCIFCLLCEAYVRWLQLQDSSQSPDPDDFIRYAKEWDFYRMFAIASLEQTAFFTGIFTVLWLARLPALGTASSFILLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLTSHSQAVRVTLNISRKLALLAILGGLVLESSLVCLFQRMGWDVGGSCPVYKA
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(99636..99769,102110..102334,102942..103095,105280..105399,107873..107968))
location: region:99636-107968:-1
so has part: feature:107873-107968:-1:exon
so has part: feature:105280-105399:-1:exon
so has part: feature:102942-103095:-1:exon
so has part: feature:102110-102334:-1:exon
so has part: feature:99636-99769:-1:exon

XP_038617058.1
type: Protein
SIO_000068: ncbiprotein

position:99636:-1
position: 99636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107968:-1
position: 107968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107873-107968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105280-105399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102942-103095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102110-102334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99636-99769:-1:exon

TTC13
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108765..145172
location: region:108765-145172:1
so has part: feature:108765-145172:1:exon
subclass of: SO_0000010

119940968
type: Gene
SIO_000068: ncbigene

position:108765:1
position: 108765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145172:1
position: 145172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108765-145172:1:exon

TTC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TTC13
product: tetratricopeptide repeat domain 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761382.1
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(108765..108769,109042..109190,118824..118918,119717..119792,121420..121490,122366..122431,123349..123441,125920..126036,126917..127027,128033..128115,129887..130028,130521..130695,131653..131809,132316..132446,132970..133102,136487..136579,138235..138318,139673..139757,139970..140079,141767..141902,142333..142412,143460..143538,144002..144081,144972..145172)
location: region:108765-145172:1
so has part: feature:108765-108769:1:exon
so has part: feature:109042-109190:1:exon
so has part: feature:118824-118918:1:exon
so has part: feature:119717-119792:1:exon
so has part: feature:121420-121490:1:exon
so has part: feature:122366-122431:1:exon
so has part: feature:123349-123441:1:exon
so has part: feature:125920-126036:1:exon
so has part: feature:126917-127027:1:exon
so has part: feature:128033-128115:1:exon
so has part: feature:129887-130028:1:exon
so has part: feature:130521-130695:1:exon
so has part: feature:131653-131809:1:exon
so has part: feature:132316-132446:1:exon
so has part: feature:132970-133102:1:exon
so has part: feature:136487-136579:1:exon
so has part: feature:138235-138318:1:exon
so has part: feature:139673-139757:1:exon
so has part: feature:139970-140079:1:exon
so has part: feature:141767-141902:1:exon
so has part: feature:142333-142412:1:exon
so has part: feature:143460-143538:1:exon
so has part: feature:144002-144081:1:exon
so has part: feature:144972-145172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108765-108769:1:exon

position:108769:1
position: 108769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109042-109190:1:exon

position:109042:1
position: 109042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109190:1
position: 109190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118824-118918:1:exon

position:118824:1
position: 118824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118918:1
position: 118918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119717-119792:1:exon

position:119717:1
position: 119717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119792:1
position: 119792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121420-121490:1:exon

position:121420:1
position: 121420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121490:1
position: 121490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122366-122431:1:exon

position:122366:1
position: 122366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122431:1
position: 122431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123349-123441:1:exon

position:123349:1
position: 123349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123441:1
position: 123441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125920-126036:1:exon

position:125920:1
position: 125920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126036:1
position: 126036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126917-127027:1:exon

position:126917:1
position: 126917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127027:1
position: 127027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128033-128115:1:exon

position:128033:1
position: 128033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128115:1
position: 128115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:129887-130028:1:exon

position:129887:1
position: 129887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130028:1
position: 130028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130521-130695:1:exon

position:130521:1
position: 130521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130695:1
position: 130695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:131653-131809:1:exon

position:131653:1
position: 131653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131809:1
position: 131809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:132316-132446:1:exon

position:132316:1
position: 132316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132446:1
position: 132446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:132970-133102:1:exon

position:132970:1
position: 132970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133102:1
position: 133102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:136487-136579:1:exon

position:136487:1
position: 136487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136579:1
position: 136579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:138235-138318:1:exon

position:138235:1
position: 138235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138318:1
position: 138318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:139673-139757:1:exon

position:139673:1
position: 139673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139757:1
position: 139757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:139970-140079:1:exon

position:139970:1
position: 139970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140079:1
position: 140079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:141767-141902:1:exon

position:141767:1
position: 141767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141902:1
position: 141902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:142333-142412:1:exon

position:142333:1
position: 142333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142412:1
position: 142412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:143460-143538:1:exon

position:143460:1
position: 143460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143538:1
position: 143538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:144002-144081:1:exon

position:144002:1
position: 144002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144081:1
position: 144081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:144972-145172:1:exon

position:144972:1
position: 144972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13
translation: MKSSGLPLPPVLLLLLLLPRSVSGLAAPGPELYSPLPEPAAWAARYSDDCGESSFLSFHDSDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFATDNVNTNEELAIAYVLISSGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDRPDVLEQRAEILSPLGRVNEALSDLTKAIQLQPSARLYRHRGTLHFISEDYAAAHEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALLLNHNHVQTLQLRGVMLYHHGSLHEALKSFKRCLQLEPYNEVCQHMRGLSHVALGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTLLTEYSVDEDLPGGFKDHWAKNLPFLIDDYEEQPGLQPHIKDVLPQNFDSYKLEVQELICAADRLGSLMQYETPGFLPNRRIHRAMGLAALEVMQAVRRTWANSKVRTHGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMSARSLSRGFNNHINLIRGQVINMRYLEYFERILHFIKDRILVYHGANNPKGLLEVREALDKVHRVEDLLPVMKQFNSKTRDGFTVNTKVPSLKDPGKEYDGFTITITGDKVGNILFSVETQTTEERTHLYHAELDALYKDLTTKGKILILSSELGEADVVCNLILSLVYYFYNLMPLSRGSSVIAYSVIMGALMASGKEVSGKIPKGKLVDFEAMTAPGSEAFGKMAKSWMSLKSISPSYRSLPAVAETFPTLRSILEVLNTDSSPRCPKQL
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(108765..108769,109042..109190,118824..118918,119717..119792,121420..121490,122366..122431,123349..123441,125920..126036,126917..127027,128033..128115,129887..130028,130521..130695,131653..131809,132316..132446,132970..133102,136487..136579,138235..138318,139673..139757,139970..140079,141767..141902,142333..142412,143460..143538,144002..144081,144972..145086)
location: region:108765-145086:1
so has part: feature:108765-108769:1:exon
so has part: feature:109042-109190:1:exon
so has part: feature:118824-118918:1:exon
so has part: feature:119717-119792:1:exon
so has part: feature:121420-121490:1:exon
so has part: feature:122366-122431:1:exon
so has part: feature:123349-123441:1:exon
so has part: feature:125920-126036:1:exon
so has part: feature:126917-127027:1:exon
so has part: feature:128033-128115:1:exon
so has part: feature:129887-130028:1:exon
so has part: feature:130521-130695:1:exon
so has part: feature:131653-131809:1:exon
so has part: feature:132316-132446:1:exon
so has part: feature:132970-133102:1:exon
so has part: feature:136487-136579:1:exon
so has part: feature:138235-138318:1:exon
so has part: feature:139673-139757:1:exon
so has part: feature:139970-140079:1:exon
so has part: feature:141767-141902:1:exon
so has part: feature:142333-142412:1:exon
so has part: feature:143460-143538:1:exon
so has part: feature:144002-144081:1:exon
so has part: feature:144972-145086:1:exon

XP_038617310.1
type: Protein
SIO_000068: ncbiprotein

position:145086:1
position: 145086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108765-108769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109042-109190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118824-118918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119717-119792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121420-121490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122366-122431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123349-123441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125920-126036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126917-127027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128033-128115:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129887-130028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130521-130695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:131653-131809:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132316-132446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:132970-133102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136487-136579:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:138235-138318:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139673-139757:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:139970-140079:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141767-141902:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142333-142412:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:143460-143538:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:144002-144081:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:144972-145086:1:exon

C19H1orf198
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: C19H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150185..162235
location: region:150185-162235:1
so has part: feature:150185-162235:1:exon
subclass of: SO_0000010

119940872
type: Gene
SIO_000068: ncbigene

position:150185:1
position: 150185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162235:1
position: 162235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150185-162235:1:exon

C19H1orf198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: C19H1orf198
product: chromosome 19 C1orf198 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761240.1
SIO_010081: C19H1orf198
subclass of: SO_0000673
so part of: C19H1orf198
location: join(150185..150615,156100..156150,158840..159394,160494..162235)
location: region:150185-162235:1
so has part: feature:150185-150615:1:exon
so has part: feature:156100-156150:1:exon
so has part: feature:158840-159394:1:exon
so has part: feature:160494-162235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150185-150615:1:exon

position:150615:1
position: 150615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156100-156150:1:exon

position:156100:1
position: 156100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156150:1
position: 156150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158840-159394:1:exon

position:158840:1
position: 158840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159394:1
position: 159394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160494-162235:1:exon

position:160494:1
position: 160494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H1orf198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: C19H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf198 homolog
translation: MASMAAAIAASRTAALNGNRPLDEKERKRFTYFSSLSPMARKIMQDKERIRQRYGPDWERLPARRQDELIDRGLLGPHVQARYAAHCAKPSGPDPAAADTGQKVVHFGDEDLTWQDEHSAPFSWETKSQMEFSIASLSIQEPSGSLTQNDQRPAAKPTLGAKTPGADGLGAPRKEEESSSFWKISAERSRVEGTQAELPSLTPSQIKSLEKGEKGLTPYLRPEPAPWDREPARAERLGPPRQERTLLPGLASEREKAWPGPASPTKAGDSWLPEPAHIPASAASRQDGTGSDDAASDSAGGDTFLSQTVSAQPNPSKVLLKTGFDFLDNW
SIO_010081: C19H1orf198
subclass of: SO_0000673
so part of: C19H1orf198
location: join(150286..150615,156100..156150,158840..159394,160494..160550)
location: region:150286-160550:1
so has part: feature:150286-150615:1:exon
so has part: feature:156100-156150:1:exon
so has part: feature:158840-159394:1:exon
so has part: feature:160494-160550:1:exon

XP_038617168.1
type: Protein
SIO_000068: ncbiprotein

position:150286:1
position: 150286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160550:1
position: 160550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150286-150615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156100-156150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158840-159394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160494-160550:1:exon

CAPN9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CAPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(163903..190657)
location: region:163903-190657:-1
so has part: feature:163903-190657:-1:exon
subclass of: SO_0000010

119940969
type: Gene
SIO_000068: ncbigene

position:163903:-1
position: 163903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190657:-1
position: 190657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163903-190657:-1:exon

CAPN9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CAPN9
product: calpain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761383.1
SIO_010081: CAPN9
subclass of: SO_0000673
so part of: CAPN9
location: complement(join(163903..163929,165499..165557,166851..166967,167749..167827,167979..168047,169206..169270,169591..169648,169786..169866,170024..170060,170370..170578,171073..171230,171625..171785,172713..172790,173270..173355,174082..174165,174603..174771,175304..175437,176841..176959,177429..177498,179461..179806,179863..179950,188348..188496,189771..189856,190071..190220,190334..190475,190584..190657))
location: region:163903-190657:-1
so has part: feature:190584-190657:-1:exon
so has part: feature:190334-190475:-1:exon
so has part: feature:190071-190220:-1:exon
so has part: feature:189771-189856:-1:exon
so has part: feature:188348-188496:-1:exon
so has part: feature:179863-179950:-1:exon
so has part: feature:179461-179806:-1:exon
so has part: feature:177429-177498:-1:exon
so has part: feature:176841-176959:-1:exon
so has part: feature:175304-175437:-1:exon
so has part: feature:174603-174771:-1:exon
so has part: feature:174082-174165:-1:exon
so has part: feature:173270-173355:-1:exon
so has part: feature:172713-172790:-1:exon
so has part: feature:171625-171785:-1:exon
so has part: feature:171073-171230:-1:exon
so has part: feature:170370-170578:-1:exon
so has part: feature:170024-170060:-1:exon
so has part: feature:169786-169866:-1:exon
so has part: feature:169591-169648:-1:exon
so has part: feature:169206-169270:-1:exon
so has part: feature:167979-168047:-1:exon
so has part: feature:167749-167827:-1:exon
so has part: feature:166851-166967:-1:exon
so has part: feature:165499-165557:-1:exon
so has part: feature:163903-163929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190584-190657:-1:exon

position:190584:-1
position: 190584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190334-190475:-1:exon

position:190334:-1
position: 190334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190475:-1
position: 190475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190071-190220:-1:exon

position:190071:-1
position: 190071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190220:-1
position: 190220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189771-189856:-1:exon

position:189771:-1
position: 189771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189856:-1
position: 189856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188348-188496:-1:exon

position:188348:-1
position: 188348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188496:-1
position: 188496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179863-179950:-1:exon

position:179863:-1
position: 179863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179950:-1
position: 179950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:179461-179806:-1:exon

position:179461:-1
position: 179461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179806:-1
position: 179806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:177429-177498:-1:exon

position:177429:-1
position: 177429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177498:-1
position: 177498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176841-176959:-1:exon

position:176841:-1
position: 176841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176959:-1
position: 176959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175304-175437:-1:exon

position:175304:-1
position: 175304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175437:-1
position: 175437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:174603-174771:-1:exon

position:174603:-1
position: 174603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174771:-1
position: 174771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:174082-174165:-1:exon

position:174082:-1
position: 174082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174165:-1
position: 174165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:173270-173355:-1:exon

position:173270:-1
position: 173270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173355:-1
position: 173355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:172713-172790:-1:exon

position:172713:-1
position: 172713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172790:-1
position: 172790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:171625-171785:-1:exon

position:171625:-1
position: 171625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171785:-1
position: 171785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:171073-171230:-1:exon

position:171073:-1
position: 171073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171230:-1
position: 171230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:170370-170578:-1:exon

position:170370:-1
position: 170370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170578:-1
position: 170578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:170024-170060:-1:exon

position:170024:-1
position: 170024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170060:-1
position: 170060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:169786-169866:-1:exon

position:169786:-1
position: 169786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169866:-1
position: 169866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:169591-169648:-1:exon

position:169591:-1
position: 169591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169648:-1
position: 169648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:169206-169270:-1:exon

position:169206:-1
position: 169206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169270:-1
position: 169270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:167979-168047:-1:exon

position:167979:-1
position: 167979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168047:-1
position: 168047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:167749-167827:-1:exon

position:167749:-1
position: 167749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167827:-1
position: 167827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:166851-166967:-1:exon

position:166851:-1
position: 166851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166967:-1
position: 166967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:165499-165557:-1:exon

position:165499:-1
position: 165499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165557:-1
position: 165557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:163903-163929:-1:exon

position:163929:-1
position: 163929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPN9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CAPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-9
translation: MSVNTARTGHWGEKRESDGPSLTTRPSRLTGQRSWLFKGVLTFHPGVATGEDPAVCAGEVVFLALRLSSPLQLSALRAHPIQAQGPAGGWRRPCARKLQPAICSQTSSISKNCPALGFPAKRGVSSPGDGRGQAVTKWPPAPAHPEASGQTWPTRTLARNLLPMENIVLHRGLPPSELYPVFWKMVMMVGFFEIQWHLLSAGLVGGVHSSHSMMSSPGPARRNKEPRGGSFCPLAKSGRALPPVPDNRPGIRLHVCSSTSCSSCPFRARLGPEPAMPPPPGRTPGPREPHLGRVSPGPPGRTFEELRDQCLQRGVLFEDPDFPADNSSLFFSEMPPVPFVWKRPGEIVRNPEFVSDGATRTDICQGDLGDCWLLAAIASLTLNPRVLARVVPPQQSFGPGYAGIFHFQLWQHGQWLDVVIDDRLPTFKDRLVFLHSADHNEFWSALLEKAYAKLNGSYEALKGGSTMEAMEDFTGGIAETLDVKAIPEGLCEVLRKALDRGSLVACSMEARSAADSEARTPFGLVKGHAYSVTGIDQVTFRGQRVELARVRNPWGQVEWNGPWSDDSPEWRSVELSEKKRLSHTALDDGEFWMPFTDFKAHFDKVEICNLTPDSLQGSTLLQWEVAVHHGSWVKGATAGGCRNFLDTFWTNPQIKLSLSKEDGGKEDCTLVVALMQKNRRKLKKFGANMLTIGYAIYQCPGQDGHLGRDFFQCHASQARSKTYVNLREVSGRFRLPPGEYILVPSTFEPHQEADFCLRIFSENAAVTQDMDGQVNVELPEPLKPTSRQQETEEERQFRILFERVAGEDLQISAEELQEILNAVIRNTKNIQFKKLSLVSCRNIISLMDTNGSGKLELDEFKAFWARLKAWTNIFFRFDGDKSGTMSSYELRGALKAAGFQLNNNLLQLLVLRYADERFQLDFDDFLNCLIRLENTSRVFQALKATDSEFLSLNVGEFILLVMNI
SIO_010081: CAPN9
subclass of: SO_0000673
so part of: CAPN9
location: complement(join(163903..163929,165499..165557,166851..166967,167749..167827,167979..168047,169206..169270,169591..169648,169786..169866,170024..170060,170370..170578,171073..171230,171625..171785,172713..172790,173270..173355,174082..174165,174603..174771,175304..175437,176841..176959,177429..177498,179461..179806,179863..179950,188348..188496,189771..189856,190071..190220,190334..190475,190584..190657))
location: region:163903-190657:-1
so has part: feature:190584-190657:-1:exon
so has part: feature:190334-190475:-1:exon
so has part: feature:190071-190220:-1:exon
so has part: feature:189771-189856:-1:exon
so has part: feature:188348-188496:-1:exon
so has part: feature:179863-179950:-1:exon
so has part: feature:179461-179806:-1:exon
so has part: feature:177429-177498:-1:exon
so has part: feature:176841-176959:-1:exon
so has part: feature:175304-175437:-1:exon
so has part: feature:174603-174771:-1:exon
so has part: feature:174082-174165:-1:exon
so has part: feature:173270-173355:-1:exon
so has part: feature:172713-172790:-1:exon
so has part: feature:171625-171785:-1:exon
so has part: feature:171073-171230:-1:exon
so has part: feature:170370-170578:-1:exon
so has part: feature:170024-170060:-1:exon
so has part: feature:169786-169866:-1:exon
so has part: feature:169591-169648:-1:exon
so has part: feature:169206-169270:-1:exon
so has part: feature:167979-168047:-1:exon
so has part: feature:167749-167827:-1:exon
so has part: feature:166851-166967:-1:exon
so has part: feature:165499-165557:-1:exon
so has part: feature:163903-163929:-1:exon

XP_038617311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190584-190657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190334-190475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190071-190220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189771-189856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188348-188496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179863-179950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179461-179806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:177429-177498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176841-176959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175304-175437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174603-174771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:174082-174165:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:173270-173355:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172713-172790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:171625-171785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:171073-171230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:170370-170578:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:170024-170060:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:169786-169866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:169591-169648:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:169206-169270:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:167979-168047:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:167749-167827:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:166851-166967:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:165499-165557:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:163903-163929:-1:exon

AGT
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189864..195103
location: region:189864-195103:1
so has part: feature:189864-195103:1:exon
subclass of: SO_0000010

119941032
type: Gene
SIO_000068: ncbigene

position:189864:1
position: 189864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195103:1
position: 195103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189864-195103:1:exon

AGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AGT
product: angiotensinogen, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761475.1
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(189864..189971,190386..190460,190988..191876,193100..193367,194016..194160,194731..195103)
location: region:189864-195103:1
so has part: feature:189864-189971:1:exon
so has part: feature:190386-190460:1:exon
so has part: feature:190988-191876:1:exon
so has part: feature:193100-193367:1:exon
so has part: feature:194016-194160:1:exon
so has part: feature:194731-195103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189864-189971:1:exon

position:189971:1
position: 189971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190386-190460:1:exon

position:190386:1
position: 190386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190460:1
position: 190460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190988-191876:1:exon

position:190988:1
position: 190988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191876:1
position: 191876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193100-193367:1:exon

position:193100:1
position: 193100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193367:1
position: 193367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194016-194160:1:exon

position:194016:1
position: 194016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194160:1
position: 194160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194731-195103:1:exon

position:194731:1
position: 194731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AGT
product: angiotensinogen, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761476.1
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(189868..189966,190386..190460,190988..191876,193100..193367,194016..194160,194731..195103)
location: region:189868-195103:1
so has part: feature:189868-189966:1:exon
so has part: feature:190386-190460:1:exon
so has part: feature:190988-191876:1:exon
so has part: feature:193100-193367:1:exon
so has part: feature:194016-194160:1:exon
so has part: feature:194731-195103:1:exon

position:189868:1
position: 189868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189868-189966:1:exon

position:189966:1
position: 189966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190386-190460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190988-191876:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193100-193367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194016-194160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194731-195103:1:exon

AGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MARTVTLLCLLGLAAVVAGDRVYVHPFHFLTNDPERCAKPSDPAAEAPTGETFVPVPIQAKTSPMDEVALWERVTAEVRSLGPEGRERATSVAALLNFLGFRLRRALRALRDGHGEAHQGELLAPAAIFGSLASLHLGASGTTASDLQALLGVPQEDGGCTTQLDGEKVLAVLRAVMGLFLAGEAGGVRAGDPHLRLSTLVGLFTSPGLRLCEAFFQSLQPAAAITYARSLDLATDPGLAAERVDRFVGAVSGWPRRLSPTPSCPDDTLLFNTYIRFQAAIGGASRLAQPQAFQVNRTSHELVPTLSVTGTFQYWRDDANNFTVVRVPLGANARLLLVQPDPGTAPEQVEAQLWTSDFPLWLNRLEPRAVHLTLPRLTMESAVNLQDLLALSKLPHLLDRKANFSAISEDDVRLGKVMNKILFELTESGAEAPEEPTQAPVGSEPLEVTLNRPFLLAVYEQVTKALLFLGRATDPLRGV
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(191042..191876,193100..193367,194016..194160,194731..194922)
location: region:191042-194922:1
so has part: feature:191042-191876:1:exon
so has part: feature:193100-193367:1:exon
so has part: feature:194016-194160:1:exon
so has part: feature:194731-194922:1:exon

XP_038617403.1
type: Protein
SIO_000068: ncbiprotein

position:191042:1
position: 191042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194922:1
position: 194922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191042-191876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193100-193367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194016-194160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194731-194922:1:exon

AGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MARTVTLLCLLGLAAVVAGDRVYVHPFHFLTNDPERCAKPSDPAAEAPTGETFVPVPIQAKTSPMDEVALWERVTAEVRSLGPEGRERATSVAALLNFLGFRLRRALRALRDGHGEAHQGELLAPAAIFGSLASLHLGASGTTASDLQALLGVPQEDGGCTTQLDGEKVLAVLRAVMGLFLAGEAGGVRAGDPHLRLSTLVGLFTSPGLRLCEAFFQSLQPAAAITYARSLDLATDPGLAAERVDRFVGAVSGWPRRLSPTPSCPDDTLLFNTYIRFQAAIGGASRLAQPQAFQVNRTSHELVPTLSVTGTFQYWRDDANNFTVVRVPLGANARLLLVQPDPGTAPEQVEAQLWTSDFPLWLNRLEPRAVHLTLPRLTMESAVNLQDLLALSKLPHLLDRKANFSAISEDDVRLGKVMNKILFELTESGAEAPEEPTQAPVGSEPLEVTLNRPFLLAVYEQVTKALLFLGRATDPLRGV
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(191042..191876,193100..193367,194016..194160,194731..194922)
location: region:191042-194922:1
so has part: feature:191042-191876:1:exon
so has part: feature:193100-193367:1:exon
so has part: feature:194016-194160:1:exon
so has part: feature:194731-194922:1:exon

XP_038617404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191042-191876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193100-193367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194016-194160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194731-194922:1:exon

COG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(196283..219932)
location: region:196283-219932:-1
so has part: feature:196283-219932:-1:exon
subclass of: SO_0000010

119940952
type: Gene
SIO_000068: ncbigene

position:196283:-1
position: 196283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219932:-1
position: 219932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196283-219932:-1:exon

COG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: COG2
product: component of oligomeric golgi complex 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761366.1
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(196283..196651,197719..197899,199833..199972,200147..200289,200628..200700,201521..201727,202749..202900,204118..204179,206627..206766,207430..207556,208322..208446,208914..209093,209634..209742,211131..211234,212350..212430,213098..213163,214734..214895,219780..219932))
location: region:196283-219932:-1
so has part: feature:219780-219932:-1:exon
so has part: feature:214734-214895:-1:exon
so has part: feature:213098-213163:-1:exon
so has part: feature:212350-212430:-1:exon
so has part: feature:211131-211234:-1:exon
so has part: feature:209634-209742:-1:exon
so has part: feature:208914-209093:-1:exon
so has part: feature:208322-208446:-1:exon
so has part: feature:207430-207556:-1:exon
so has part: feature:206627-206766:-1:exon
so has part: feature:204118-204179:-1:exon
so has part: feature:202749-202900:-1:exon
so has part: feature:201521-201727:-1:exon
so has part: feature:200628-200700:-1:exon
so has part: feature:200147-200289:-1:exon
so has part: feature:199833-199972:-1:exon
so has part: feature:197719-197899:-1:exon
so has part: feature:196283-196651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219780-219932:-1:exon

position:219780:-1
position: 219780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214734-214895:-1:exon

position:214734:-1
position: 214734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214895:-1
position: 214895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213098-213163:-1:exon

position:213098:-1
position: 213098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213163:-1
position: 213163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:212350-212430:-1:exon

position:212350:-1
position: 212350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212430:-1
position: 212430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211131-211234:-1:exon

position:211131:-1
position: 211131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211234:-1
position: 211234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209634-209742:-1:exon

position:209634:-1
position: 209634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209742:-1
position: 209742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:208914-209093:-1:exon

position:208914:-1
position: 208914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209093:-1
position: 209093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208322-208446:-1:exon

position:208322:-1
position: 208322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208446:-1
position: 208446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207430-207556:-1:exon

position:207430:-1
position: 207430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207556:-1
position: 207556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:206627-206766:-1:exon

position:206627:-1
position: 206627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206766:-1
position: 206766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:204118-204179:-1:exon

position:204118:-1
position: 204118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204179:-1
position: 204179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:202749-202900:-1:exon

position:202749:-1
position: 202749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202900:-1
position: 202900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:201521-201727:-1:exon

position:201521:-1
position: 201521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201727:-1
position: 201727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:200628-200700:-1:exon

position:200628:-1
position: 200628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200700:-1
position: 200700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:200147-200289:-1:exon

position:200147:-1
position: 200147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200289:-1
position: 200289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:199833-199972:-1:exon

position:199833:-1
position: 199833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199972:-1
position: 199972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:197719-197899:-1:exon

position:197719:-1
position: 197719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197899:-1
position: 197899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:196283-196651:-1:exon

position:196651:-1
position: 196651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 2
translation: MEKSRMNLPKGPDTLCFDKDEFMKDDFDVDHFVSDCRRRVQLEELRNDLELYYRLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLKSSVSEGIRAIDEQLSKQDDIRRKKMCVLRLIQVIRSVEKIEKILHSQSPSQSSSLEGSSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSNVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIVESLVQAHPKGLQAMYSKLLEFVPHHCRLLREVTGGTSSSERGNSVPGYDFLVNSVWPEIVRGLEERLPWLFNPGNPDSFHERYTVSMDFVRRFERQCGSQASVKRLRAHSSYHSFNNKWNLPVYFQIRFREIAAGLERALSDGLEEAPAGSSYCLLATQVTWASVTRCWSDELFLPLLAPRLWKLTLQILARFATFVKELSLRPAPGENTKDGKKVAGAPGKDGVSPGPAAGEEPGSCSSSETPPPAPSISGPQLVFVVADVDRLQGQLPGLLEVIQPKLEVIGFKNVSCLSAALEDSRASLSECLPPLSRRVVQGLSEACFGCLKSALEVPRLYRRTNKEVPSRASPYVDGALKPFHQLQQDHQDTLPPALARQWLEEALSESARRYIETVSDVLSSVKKMEESLKRLKQARKAAAVTPAGSSGGMSDDDKIRLQLALDVEHFVEQVQGMGLQTNNIDGFSALIELAAAAKEQATAEQP
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(196550..196651,197719..197899,199833..199972,200147..200289,200628..200700,201521..201727,202749..202900,204118..204179,206627..206766,207430..207556,208322..208446,208914..209093,209634..209742,211131..211234,212350..212430,213098..213163,214734..214895,219780..219851))
location: region:196550-219851:-1
so has part: feature:219780-219851:-1:exon
so has part: feature:214734-214895:-1:exon
so has part: feature:213098-213163:-1:exon
so has part: feature:212350-212430:-1:exon
so has part: feature:211131-211234:-1:exon
so has part: feature:209634-209742:-1:exon
so has part: feature:208914-209093:-1:exon
so has part: feature:208322-208446:-1:exon
so has part: feature:207430-207556:-1:exon
so has part: feature:206627-206766:-1:exon
so has part: feature:204118-204179:-1:exon
so has part: feature:202749-202900:-1:exon
so has part: feature:201521-201727:-1:exon
so has part: feature:200628-200700:-1:exon
so has part: feature:200147-200289:-1:exon
so has part: feature:199833-199972:-1:exon
so has part: feature:197719-197899:-1:exon
so has part: feature:196550-196651:-1:exon

XP_038617294.1
type: Protein
SIO_000068: ncbiprotein

position:196550:-1
position: 196550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219851:-1
position: 219851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219780-219851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214734-214895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213098-213163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212350-212430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211131-211234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209634-209742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208914-209093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208322-208446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207430-207556:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206627-206766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204118-204179:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202749-202900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201521-201727:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200628-200700:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200147-200289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:199833-199972:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:197719-197899:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:196550-196651:-1:exon

PGBD5
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229995..257569
location: region:229995-257569:1
so has part: feature:229995-257569:1:exon
subclass of: SO_0000010

119940818
type: Gene
SIO_000068: ncbigene

position:229995:1
position: 229995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257569:1
position: 257569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229995-257569:1:exon

PGBD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PGBD5
product: piggyBac transposable element derived 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761161.1
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: join(229995..230536,245451..245878,247427..247561,250633..250813,252616..252813,253803..253908,255105..257569)
location: region:229995-257569:1
so has part: feature:229995-230536:1:exon
so has part: feature:245451-245878:1:exon
so has part: feature:247427-247561:1:exon
so has part: feature:250633-250813:1:exon
so has part: feature:252616-252813:1:exon
so has part: feature:253803-253908:1:exon
so has part: feature:255105-257569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229995-230536:1:exon

position:230536:1
position: 230536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245451-245878:1:exon

position:245451:1
position: 245451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245878:1
position: 245878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247427-247561:1:exon

position:247427:1
position: 247427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247561:1
position: 247561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250633-250813:1:exon

position:250633:1
position: 250633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250813:1
position: 250813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:252616-252813:1:exon

position:252616:1
position: 252616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252813:1
position: 252813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:253803-253908:1:exon

position:253803:1
position: 253803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253908:1
position: 253908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255105-257569:1:exon

position:255105:1
position: 255105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGBD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PGBD5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: piggyBac transposable element-derived protein 5
translation: MAEAGAPRKKALSLLEAARSRYESLQISDDVFGESGPDSSGNPFYSTSADSRSTSDASSAEEDEAPDPAPDPGGAAGAGHLDRTKGDRLRRDAAGRGGGGGGGGEGPRGPEAAAPPPPQAPGPMEEEEEEDDDQEDARRTDEGSCGGWTQALRDAPPPRFEDTTGPTRKMPPNASAMDFFQLFVPDNVLKNMAVQTNMYAKKFQERFGSDGAWAEVTLPEMKAFLGYVISTSIYHCESVLSIWSSGFYSNKSIALVMTQARFEKILKYFHVVAFRSSQTSHGLYKIQPFLDSLQNGFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSATGFISQIYVHLKEGGGTDGLDALKNKPQLHSLVAKSLCQNAAGKNYIIFTGPSITSLTLFEEFEKQEIYCCGLLSSRKSDCTGLPLSMLDSPEAPQARGQYRIKMKGNMSLICWYNKGHFRFLTNAYSPTQRGVIIKRKSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAVSIAINNAYILYKMSDAYHVQRFSRAQFGERLVRELLGLEDSSPAH
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: join(230043..230536,245451..245878,247427..247561,250633..250813,252616..252813,253803..253908,255105..255300)
location: region:230043-255300:1
so has part: feature:230043-230536:1:exon
so has part: feature:245451-245878:1:exon
so has part: feature:247427-247561:1:exon
so has part: feature:250633-250813:1:exon
so has part: feature:252616-252813:1:exon
so has part: feature:253803-253908:1:exon
so has part: feature:255105-255300:1:exon

XP_038617089.1
type: Protein
SIO_000068: ncbiprotein

position:230043:1
position: 230043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255300:1
position: 255300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230043-230536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245451-245878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247427-247561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250633-250813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252616-252813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253803-253908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255105-255300:1:exon

GALNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(262510..293437)
location: region:262510-293437:-1
so has part: feature:262510-293437:-1:exon
subclass of: SO_0000010

119940888
type: Gene
SIO_000068: ncbigene

position:262510:-1
position: 262510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293437:-1
position: 293437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262510-293437:-1:exon

GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GALNT2
product: polypeptide N-acetylgalactosaminyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761262.1
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: complement(join(262510..262724,263967..264086,264398..264524,264875..264958,265292..265384,266083..266209,267283..267386,268202..268289,268978..269065,269702..269823,270938..271003,271374..271441,271541..271639,271900..272053,273349..273442,293127..293437))
location: region:262510-293437:-1
so has part: feature:293127-293437:-1:exon
so has part: feature:273349-273442:-1:exon
so has part: feature:271900-272053:-1:exon
so has part: feature:271541-271639:-1:exon
so has part: feature:271374-271441:-1:exon
so has part: feature:270938-271003:-1:exon
so has part: feature:269702-269823:-1:exon
so has part: feature:268978-269065:-1:exon
so has part: feature:268202-268289:-1:exon
so has part: feature:267283-267386:-1:exon
so has part: feature:266083-266209:-1:exon
so has part: feature:265292-265384:-1:exon
so has part: feature:264875-264958:-1:exon
so has part: feature:264398-264524:-1:exon
so has part: feature:263967-264086:-1:exon
so has part: feature:262510-262724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293127-293437:-1:exon

position:293127:-1
position: 293127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273349-273442:-1:exon

position:273349:-1
position: 273349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273442:-1
position: 273442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271900-272053:-1:exon

position:271900:-1
position: 271900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272053:-1
position: 272053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271541-271639:-1:exon

position:271541:-1
position: 271541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271639:-1
position: 271639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271374-271441:-1:exon

position:271374:-1
position: 271374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271441:-1
position: 271441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270938-271003:-1:exon

position:270938:-1
position: 270938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271003:-1
position: 271003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269702-269823:-1:exon

position:269702:-1
position: 269702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269823:-1
position: 269823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268978-269065:-1:exon

position:268978:-1
position: 268978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269065:-1
position: 269065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:268202-268289:-1:exon

position:268202:-1
position: 268202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268289:-1
position: 268289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:267283-267386:-1:exon

position:267283:-1
position: 267283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267386:-1
position: 267386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266083-266209:-1:exon

position:266083:-1
position: 266083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266209:-1
position: 266209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:265292-265384:-1:exon

position:265292:-1
position: 265292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265384:-1
position: 265384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264875-264958:-1:exon

position:264875:-1
position: 264875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264958:-1
position: 264958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:264398-264524:-1:exon

position:264398:-1
position: 264398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264524:-1
position: 264524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:263967-264086:-1:exon

position:263967:-1
position: 263967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264086:-1
position: 264086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:262510-262724:-1:exon

position:262724:-1
position: 262724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 2
translation: MRRRSRLLLCFAVLWALGIAYYVYSGGSAALAGAGASGAGSGAGRKEDWNEIDPVKKKDAHGTNGEDKAQSVETLPPGKVRWQDFNQEAYVGVTMVRSGQDPYARNKFNQVESDKLRMDRAVPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVASVLKKSPPHLVKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQARVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRARQGNPVAPIKTPMIAGGLFVMDKTYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKRLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKDRSVKHMDLCLTVVERTPGALVKLQGCRENDSRQKWEQIEGNSKLRYVGSNLCLDSRNARSGGLGVEVCGPALSQQWKFTLNLQP
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: complement(join(262569..262724,263967..264086,264398..264524,264875..264958,265292..265384,266083..266209,267283..267386,268202..268289,268978..269065,269702..269823,270938..271003,271374..271441,271541..271639,271900..272053,273349..273442,293127..293264))
location: region:262569-293264:-1
so has part: feature:293127-293264:-1:exon
so has part: feature:273349-273442:-1:exon
so has part: feature:271900-272053:-1:exon
so has part: feature:271541-271639:-1:exon
so has part: feature:271374-271441:-1:exon
so has part: feature:270938-271003:-1:exon
so has part: feature:269702-269823:-1:exon
so has part: feature:268978-269065:-1:exon
so has part: feature:268202-268289:-1:exon
so has part: feature:267283-267386:-1:exon
so has part: feature:266083-266209:-1:exon
so has part: feature:265292-265384:-1:exon
so has part: feature:264875-264958:-1:exon
so has part: feature:264398-264524:-1:exon
so has part: feature:263967-264086:-1:exon
so has part: feature:262569-262724:-1:exon

XP_038617190.1
type: Protein
SIO_000068: ncbiprotein

position:262569:-1
position: 262569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293264:-1
position: 293264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293127-293264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273349-273442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271900-272053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271541-271639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271374-271441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270938-271003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269702-269823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268978-269065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268202-268289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267283-267386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266083-266209:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265292-265384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:264875-264958:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:264398-264524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263967-264086:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:262569-262724:-1:exon

URB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312302..328079)
location: region:312302-328079:-1
so has part: feature:312302-328079:-1:exon
subclass of: SO_0000010

119940834
type: Gene
SIO_000068: ncbigene

position:312302:-1
position: 312302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328079:-1
position: 328079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312302-328079:-1:exon

URB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: URB2
product: URB2 ribosome biogenesis homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761183.1
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(312302..312715,313393..313532,314148..314235,315379..315621,316235..316345,317344..317504,318001..321304,322286..322462,323425..323552,328014..328079))
location: region:312302-328079:-1
so has part: feature:328014-328079:-1:exon
so has part: feature:323425-323552:-1:exon
so has part: feature:322286-322462:-1:exon
so has part: feature:318001-321304:-1:exon
so has part: feature:317344-317504:-1:exon
so has part: feature:316235-316345:-1:exon
so has part: feature:315379-315621:-1:exon
so has part: feature:314148-314235:-1:exon
so has part: feature:313393-313532:-1:exon
so has part: feature:312302-312715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328014-328079:-1:exon

position:328014:-1
position: 328014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323425-323552:-1:exon

position:323425:-1
position: 323425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323552:-1
position: 323552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322286-322462:-1:exon

position:322286:-1
position: 322286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322462:-1
position: 322462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318001-321304:-1:exon

position:318001:-1
position: 318001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321304:-1
position: 321304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317344-317504:-1:exon

position:317344:-1
position: 317344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317504:-1
position: 317504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316235-316345:-1:exon

position:316235:-1
position: 316235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316345:-1
position: 316345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315379-315621:-1:exon

position:315379:-1
position: 315379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315621:-1
position: 315621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:314148-314235:-1:exon

position:314148:-1
position: 314148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314235:-1
position: 314235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:313393-313532:-1:exon

position:313393:-1
position: 313393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313532:-1
position: 313532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:312302-312715:-1:exon

position:312715:-1
position: 312715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: URB2
product: URB2 ribosome biogenesis homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761182.1
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(312302..312715,313393..313532,314148..314235,315379..315621,316235..316345,317344..317504,318001..321304,322286..322462,323425..323552,324363..324446))
location: region:312302-324446:-1
so has part: feature:324363-324446:-1:exon
so has part: feature:323425-323552:-1:exon
so has part: feature:322286-322462:-1:exon
so has part: feature:318001-321304:-1:exon
so has part: feature:317344-317504:-1:exon
so has part: feature:316235-316345:-1:exon
so has part: feature:315379-315621:-1:exon
so has part: feature:314148-314235:-1:exon
so has part: feature:313393-313532:-1:exon
so has part: feature:312302-312715:-1:exon

position:324446:-1
position: 324446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324363-324446:-1:exon

position:324363:-1
position: 324363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323425-323552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322286-322462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318001-321304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317344-317504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316235-316345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315379-315621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314148-314235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313393-313532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312302-312715:-1:exon

URB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAIYSGISLKLKSSKTAWTDKLKLAHFAWVSHQCFLPNKEQVLLDWARHTLVSYYKKKLELQEDIVERLWLYLDSILRSRKLQNIVKEGKTIQLHFSLAKVLNERIAEFQTGETRSEAGPVLSCCRSLLSVPALAAVYTAKHELLVELLSQLCRLACGPPAPAGPSPALLLDVLHLALGLYLLVQRQQANPNRVFAEVVGHLLQPGLVLRHVLGAGTGDAAGGGSCPAGRPPLAREIRGQIEAVLRWGLFPAELLPSYKEELGSPEPAGDRRKGVLKTLLAPADAVLAKLADAGPHEPAIRAAVAAHSVPLLFKLFLEAYCRDGYQLVCFQAGAKLLGCLRLAGLWDGPRPEPPEPPDWSSELLALEQVLTALLGHQVYNVAADRIRHRDLQFHFYRRLAGLLLGHPQPALPVWFRCLRALVSLNHLIVEPDLEGLVAAAWVAAEAREPRSRRAQEALLAALFQTYARLRQVPRLLAAVLAAVCRPGAGRSRPAALTAGLAAALSACFLELPPGQVLDSWALALDRGQALLAPSGQGDADAALKLWSVSSLLHTVLFAARTLDGTTPLPLVRRARGLVERMLSAIVQPALVLLLDHRGPSPPLWLEKVGNSGLLLAYTWAELDAMFSLNCDRYVSPAGAGETLPALLLGADAQGWDAVAEAPGGPASVGRHCLELLALQTMKRILAPGHLPTERGLQALRDAATLIVSSDLGGPEAAAAWDGQAGTVTALTYPAAHWHLVVSNLPLLLPYLAADDVARLAGELLRTGAGAPSPSDGPTGWEPDITVTGVSRALLRGPLLPEMQPLHAAFLDRVLESCASVLSAGRRPAGAPLRRMLPWLLARGPAPGARRESQPEGDEPGGPGPREEVAESLLALASAPEPPVVLGEGQLDALLATLDVVSALDLDGLPPPFLVRTYLLALTLVAGTRGTSPLPAARALRYLDTCFRLLSRLQGVEEAHAVFRVVFASEVFQVVVTALWASRGRFPAAAEAPAWTGLLRAAATLLERLLRTTVRLKLSPVLNCRKIVSFLSACGPYTEAVAGRCPRDPDGPARQVLLVAVMTLCRELSPLVHQRQGQTPARALPDLWLRVLSLAGAVVRAAWTDRPRDRPLPPVLLSAVAALLEAETSGETEDRARALAHADLYRDAFAHVRTELPALAGDAESLRPALRLLTLFCAEPALHPGEGSVFTAVFRAVTGILADGGARDQAIQNAGPQLGELLAGLLDGGTAADFQLVMEHALRGLDIRHLWTRNLNEVLGALALLKLLLSCRLTGEKATSFWLACPQIIGALAHQNREACRDPSLLTPVVLPVLEVLADLLRRGEGLVGNPHHVTLAFAVLLAVPLDHLPAEEYGPIFLGIHEVLFAILQCHPKVMMKAIPSFLNCFNRLLFSVMHEGRQKDKGNTEDQAGVLECARLVERMYSHIAAKAEEFTVFSPFMVAQYLSGLQKATLRPAVKELLKEGIYLILDICLERDIQFLRVSLPAGIRDAFKELHHDYTVYHKTKSEGEKKYTA
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(312518..312715,313393..313532,314148..314235,315379..315621,316235..316345,317344..317504,318001..321304,322286..322462,323425..323550))
location: region:312518-323550:-1
so has part: feature:323425-323550:-1:exon
so has part: feature:322286-322462:-1:exon
so has part: feature:318001-321304:-1:exon
so has part: feature:317344-317504:-1:exon
so has part: feature:316235-316345:-1:exon
so has part: feature:315379-315621:-1:exon
so has part: feature:314148-314235:-1:exon
so has part: feature:313393-313532:-1:exon
so has part: feature:312518-312715:-1:exon

XP_038617110.1
type: Protein
SIO_000068: ncbiprotein

position:312518:-1
position: 312518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323550:-1
position: 323550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323425-323550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322286-322462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318001-321304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317344-317504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316235-316345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315379-315621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314148-314235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313393-313532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312518-312715:-1:exon

URB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAIYSGISLKLKSSKTAWTDKLKLAHFAWVSHQCFLPNKEQVLLDWARHTLVSYYKKKLELQEDIVERLWLYLDSILRSRKLQNIVKEGKTIQLHFSLAKVLNERIAEFQTGETRSEAGPVLSCCRSLLSVPALAAVYTAKHELLVELLSQLCRLACGPPAPAGPSPALLLDVLHLALGLYLLVQRQQANPNRVFAEVVGHLLQPGLVLRHVLGAGTGDAAGGGSCPAGRPPLAREIRGQIEAVLRWGLFPAELLPSYKEELGSPEPAGDRRKGVLKTLLAPADAVLAKLADAGPHEPAIRAAVAAHSVPLLFKLFLEAYCRDGYQLVCFQAGAKLLGCLRLAGLWDGPRPEPPEPPDWSSELLALEQVLTALLGHQVYNVAADRIRHRDLQFHFYRRLAGLLLGHPQPALPVWFRCLRALVSLNHLIVEPDLEGLVAAAWVAAEAREPRSRRAQEALLAALFQTYARLRQVPRLLAAVLAAVCRPGAGRSRPAALTAGLAAALSACFLELPPGQVLDSWALALDRGQALLAPSGQGDADAALKLWSVSSLLHTVLFAARTLDGTTPLPLVRRARGLVERMLSAIVQPALVLLLDHRGPSPPLWLEKVGNSGLLLAYTWAELDAMFSLNCDRYVSPAGAGETLPALLLGADAQGWDAVAEAPGGPASVGRHCLELLALQTMKRILAPGHLPTERGLQALRDAATLIVSSDLGGPEAAAAWDGQAGTVTALTYPAAHWHLVVSNLPLLLPYLAADDVARLAGELLRTGAGAPSPSDGPTGWEPDITVTGVSRALLRGPLLPEMQPLHAAFLDRVLESCASVLSAGRRPAGAPLRRMLPWLLARGPAPGARRESQPEGDEPGGPGPREEVAESLLALASAPEPPVVLGEGQLDALLATLDVVSALDLDGLPPPFLVRTYLLALTLVAGTRGTSPLPAARALRYLDTCFRLLSRLQGVEEAHAVFRVVFASEVFQVVVTALWASRGRFPAAAEAPAWTGLLRAAATLLERLLRTTVRLKLSPVLNCRKIVSFLSACGPYTEAVAGRCPRDPDGPARQVLLVAVMTLCRELSPLVHQRQGQTPARALPDLWLRVLSLAGAVVRAAWTDRPRDRPLPPVLLSAVAALLEAETSGETEDRARALAHADLYRDAFAHVRTELPALAGDAESLRPALRLLTLFCAEPALHPGEGSVFTAVFRAVTGILADGGARDQAIQNAGPQLGELLAGLLDGGTAADFQLVMEHALRGLDIRHLWTRNLNEVLGALALLKLLLSCRLTGEKATSFWLACPQIIGALAHQNREACRDPSLLTPVVLPVLEVLADLLRRGEGLVGNPHHVTLAFAVLLAVPLDHLPAEEYGPIFLGIHEVLFAILQCHPKVMMKAIPSFLNCFNRLLFSVMHEGRQKDKGNTEDQAGVLECARLVERMYSHIAAKAEEFTVFSPFMVAQYLSGLQKATLRPAVKELLKEGIYLILDICLERDIQFLRVSLPAGIRDAFKELHHDYTVYHKTKSEGEKKYTA
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(312518..312715,313393..313532,314148..314235,315379..315621,316235..316345,317344..317504,318001..321304,322286..322462,323425..323550))
location: region:312518-323550:-1
so has part: feature:323425-323550:-1:exon
so has part: feature:322286-322462:-1:exon
so has part: feature:318001-321304:-1:exon
so has part: feature:317344-317504:-1:exon
so has part: feature:316235-316345:-1:exon
so has part: feature:315379-315621:-1:exon
so has part: feature:314148-314235:-1:exon
so has part: feature:313393-313532:-1:exon
so has part: feature:312518-312715:-1:exon

XP_038617111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323425-323550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322286-322462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318001-321304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317344-317504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316235-316345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315379-315621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314148-314235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313393-313532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312518-312715:-1:exon

TAF5L
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329644..340723
location: region:329644-340723:1
so has part: feature:329644-340723:1:exon
subclass of: SO_0000010

119940943
type: Gene
SIO_000068: ncbigene

position:329644:1
position: 329644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340723:1
position: 340723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329644-340723:1:exon

TAF5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TAF5L
product: TATA-box binding protein associated factor 5 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761353.1
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: join(329644..329666,331593..331737,333384..333488,335078..335802,339850..340723)
location: region:329644-340723:1
so has part: feature:329644-329666:1:exon
so has part: feature:331593-331737:1:exon
so has part: feature:333384-333488:1:exon
so has part: feature:335078-335802:1:exon
so has part: feature:339850-340723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329644-329666:1:exon

position:329666:1
position: 329666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331593-331737:1:exon

position:331593:1
position: 331593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331737:1
position: 331737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333384-333488:1:exon

position:333384:1
position: 333384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333488:1
position: 333488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335078-335802:1:exon

position:335078:1
position: 335078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335802:1
position: 335802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339850-340723:1:exon

position:339850:1
position: 339850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
translation: MKRVRTEQIQMAVSCYLKRRQYVDSEGPQKQGLRLCQTAEEMAANLTVQSESGCANVVSAAPCQVEPQQYEVQFGRLRSFLADSDSQHSHEVTPLLYPLFVYLHLNMVQSGLKSTVDSFYSRFHGLFLQNAGQKDVVEQLQTALTAQDILANPTLRAFLDNKYVVRLQEDSYNFLLRYLQSDDNGALVQALTLHIHLDVQPAKRTDYQLYASGGSSRGESHGLEPTDGPPALLRNEAALEALRESIRRVRDGPPSLTTICFYAFYHTEQLLNTAEISPDGRLLAAGFDDSCVKLWSLRSQKLKAEPHRVDVARVHLACDVLDAEEEDGAGTEMKTLRGHCGPVYGTRFLSDGSGLLSCSEDTSVRYWDLGTFTNTVLYQGHSYPVWDLDVSPCSLYFASGSQDRTARLWSLDRTYPLRVYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGGSVRLFTGHRGPVLSLAFSPNGKFLASAGEDQRLKLWDLAGGAPFKELRGHTDNITGLAFSPDSSLVASASMDNSVRVWDIRGAHCGAAADGSSGELVGVYAGQAGSVLSVQFGACNLLLVTGVTQENQEH
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: join(331596..331737,333384..333488,335078..335802,339850..340641)
location: region:331596-340641:1
so has part: feature:331596-331737:1:exon
so has part: feature:333384-333488:1:exon
so has part: feature:335078-335802:1:exon
so has part: feature:339850-340641:1:exon

XP_038617281.1
type: Protein
SIO_000068: ncbiprotein

position:331596:1
position: 331596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340641:1
position: 340641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331596-331737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333384-333488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335078-335802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339850-340641:1:exon

ABCB10
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340707..367885
location: region:340707-367885:1
so has part: feature:340707-367885:1:exon
subclass of: SO_0000010

119940970
type: Gene
SIO_000068: ncbigene

position:340707:1
position: 340707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367885:1
position: 367885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340707-367885:1:exon

ABCB10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ABCB10
product: ATP binding cassette subfamily B member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761384.1
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: join(340707..340906,344673..344920,345050..345355,345673..345780,356223..356423,357262..357464,357858..357992,358285..358431,359012..359147,359276..359371,359900..360109,363333..363412,364020..364200,365361..365404,366657..366691,367119..367885)
location: region:340707-367885:1
so has part: feature:340707-340906:1:exon
so has part: feature:344673-344920:1:exon
so has part: feature:345050-345355:1:exon
so has part: feature:345673-345780:1:exon
so has part: feature:356223-356423:1:exon
so has part: feature:357262-357464:1:exon
so has part: feature:357858-357992:1:exon
so has part: feature:358285-358431:1:exon
so has part: feature:359012-359147:1:exon
so has part: feature:359276-359371:1:exon
so has part: feature:359900-360109:1:exon
so has part: feature:363333-363412:1:exon
so has part: feature:364020-364200:1:exon
so has part: feature:365361-365404:1:exon
so has part: feature:366657-366691:1:exon
so has part: feature:367119-367885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340707-340906:1:exon

position:340906:1
position: 340906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344673-344920:1:exon

position:344673:1
position: 344673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344920:1
position: 344920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345050-345355:1:exon

position:345050:1
position: 345050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345355:1
position: 345355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345673-345780:1:exon

position:345673:1
position: 345673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345780:1
position: 345780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356223-356423:1:exon

position:356223:1
position: 356223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356423:1
position: 356423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:357262-357464:1:exon

position:357262:1
position: 357262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357464:1
position: 357464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357858-357992:1:exon

position:357858:1
position: 357858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357992:1
position: 357992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:358285-358431:1:exon

position:358285:1
position: 358285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358431:1
position: 358431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:359012-359147:1:exon

position:359012:1
position: 359012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359147:1
position: 359147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:359276-359371:1:exon

position:359276:1
position: 359276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359371:1
position: 359371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:359900-360109:1:exon

position:359900:1
position: 359900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360109:1
position: 360109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:363333-363412:1:exon

position:363333:1
position: 363333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363412:1
position: 363412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:364020-364200:1:exon

position:364020:1
position: 364020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364200:1
position: 364200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:365361-365404:1:exon

position:365361:1
position: 365361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365404:1
position: 365404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:366657-366691:1:exon

position:366657:1
position: 366657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366691:1
position: 366691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:367119-367885:1:exon

position:367119:1
position: 367119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABCB10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial
translation: MVSVTVALVPLSPRPPRIGHAAAGGQRGRRWWGSGKASERVPPDRPAQPPGGVSDFPAVKRKAAVGPRPAARGAEEPRSRRVEEPRSRGAEEPKSRGAEEPRSRGAEEPKSRGAEERRAEEPRSADLKNRGAEEPKSRGVEDSKSRGVEGAGEPKSRGVEDSRSRRAEEPRSRRAEEPRSRRAEEPRSRRLEEPKSRGAEEPKSRRLEEPNNRGAGEPKSRRTEEPRSRRLESRIAEEASKSRGAEEGAEEPAGGPGVPGGSGVPGPPRPDAKRLLDLAHPERWRLTAAVGFLTVSSVITMSAPFFLGRIIDVIYSSPTEDYAQNLGHLCAALSGVFLCGAVANGIRVYLMQTAGQRIVNRLRGSLFSSILKQEVAFFDRTRTGELVNRLSADTALLGRAVTENLSDGLRAVAQASVGVGMMFFVSPSLATFVLGIVPPMSILAVVYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKELSEMDKYLTRVQHVLQLAKRDALARAGFFGATGLSGNLIVLAVLYKGGLLMGSAHMTVGELSSFLMYAFWVGLSVGGLSSFYSELMKGLGAGGRLWELLERRPELPFNEGVMLNQKTFRGDLEFRGVRFAYPTRPEVPIFQDFNLSIPAGSVTALVGPSGSGKSTVVSLLLRLYDPEAGTISVDGQDIRQVNPMWLRSNIGTVSQEPVLFSCSIAENIAYGANRPTSVTPADIRKAADVANAAAFIHSFPQGFDTLVGEKGVLLSGGQKQRIAIARALLKNPRILLLDEATSALDAENETVVQEALERLMEGRTVLVIAHRLSTIKKASVVAVLSQGKIIERGKHDQLLSNPNGVYSSLVRKQTFLSADDGGQEQGGPWFPRVAGRSQ
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: join(340707..340906,344673..344920,345050..345355,345673..345780,356223..356423,357262..357464,357858..357992,358285..358431,359012..359147,359276..359371,359900..360109,363333..363412,364020..364200,365361..365404,366657..366691,367119..367410)
location: region:340707-367410:1
so has part: feature:340707-340906:1:exon
so has part: feature:344673-344920:1:exon
so has part: feature:345050-345355:1:exon
so has part: feature:345673-345780:1:exon
so has part: feature:356223-356423:1:exon
so has part: feature:357262-357464:1:exon
so has part: feature:357858-357992:1:exon
so has part: feature:358285-358431:1:exon
so has part: feature:359012-359147:1:exon
so has part: feature:359276-359371:1:exon
so has part: feature:359900-360109:1:exon
so has part: feature:363333-363412:1:exon
so has part: feature:364020-364200:1:exon
so has part: feature:365361-365404:1:exon
so has part: feature:366657-366691:1:exon
so has part: feature:367119-367410:1:exon

XP_038617312.1
type: Protein
SIO_000068: ncbiprotein

position:367410:1
position: 367410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340707-340906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344673-344920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345050-345355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345673-345780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356223-356423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357262-357464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357858-357992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358285-358431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359012-359147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359276-359371:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359900-360109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:363333-363412:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:364020-364200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365361-365404:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366657-366691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:367119-367410:1:exon

NUP133
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369241..399119
location: region:369241-399119:1
so has part: feature:369241-399119:1:exon
subclass of: SO_0000010

119940971
type: Gene
SIO_000068: ncbigene

position:369241:1
position: 369241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399119:1
position: 399119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369241-399119:1:exon

NUP133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NUP133
product: nucleoporin 133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761386.1
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: join(369241..369323,370596..370762,371510..371798,374866..374984,376603..376706,377853..377960,379230..379367,381844..382014,382696..382851,382933..383003,383357..383504,383750..383897,384916..385073,385773..385864,386604..386761,387337..387431,387911..388135,388928..389050,389745..389844,391133..391384,391828..391961,393492..393650,393995..394130,394515..394633,396208..396288,396456..396520,397971..398059,398838..399119)
location: region:369241-399119:1
so has part: feature:369241-369323:1:exon
so has part: feature:370596-370762:1:exon
so has part: feature:371510-371798:1:exon
so has part: feature:374866-374984:1:exon
so has part: feature:376603-376706:1:exon
so has part: feature:377853-377960:1:exon
so has part: feature:379230-379367:1:exon
so has part: feature:381844-382014:1:exon
so has part: feature:382696-382851:1:exon
so has part: feature:382933-383003:1:exon
so has part: feature:383357-383504:1:exon
so has part: feature:383750-383897:1:exon
so has part: feature:384916-385073:1:exon
so has part: feature:385773-385864:1:exon
so has part: feature:386604-386761:1:exon
so has part: feature:387337-387431:1:exon
so has part: feature:387911-388135:1:exon
so has part: feature:388928-389050:1:exon
so has part: feature:389745-389844:1:exon
so has part: feature:391133-391384:1:exon
so has part: feature:391828-391961:1:exon
so has part: feature:393492-393650:1:exon
so has part: feature:393995-394130:1:exon
so has part: feature:394515-394633:1:exon
so has part: feature:396208-396288:1:exon
so has part: feature:396456-396520:1:exon
so has part: feature:397971-398059:1:exon
so has part: feature:398838-399119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369241-369323:1:exon

position:369323:1
position: 369323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370596-370762:1:exon

position:370596:1
position: 370596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370762:1
position: 370762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371510-371798:1:exon

position:371510:1
position: 371510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371798:1
position: 371798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374866-374984:1:exon

position:374866:1
position: 374866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374984:1
position: 374984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:376603-376706:1:exon

position:376603:1
position: 376603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376706:1
position: 376706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:377853-377960:1:exon

position:377853:1
position: 377853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377960:1
position: 377960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379230-379367:1:exon

position:379230:1
position: 379230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379367:1
position: 379367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:381844-382014:1:exon

position:381844:1
position: 381844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382014:1
position: 382014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:382696-382851:1:exon

position:382696:1
position: 382696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382851:1
position: 382851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:382933-383003:1:exon

position:382933:1
position: 382933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383003:1
position: 383003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:383357-383504:1:exon

position:383357:1
position: 383357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383504:1
position: 383504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:383750-383897:1:exon

position:383750:1
position: 383750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383897:1
position: 383897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:384916-385073:1:exon

position:384916:1
position: 384916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385073:1
position: 385073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:385773-385864:1:exon

position:385773:1
position: 385773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385864:1
position: 385864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:386604-386761:1:exon

position:386604:1
position: 386604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386761:1
position: 386761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:387337-387431:1:exon

position:387337:1
position: 387337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387431:1
position: 387431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:387911-388135:1:exon

position:387911:1
position: 387911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388135:1
position: 388135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:388928-389050:1:exon

position:388928:1
position: 388928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389050:1
position: 389050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:389745-389844:1:exon

position:389745:1
position: 389745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389844:1
position: 389844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:391133-391384:1:exon

position:391133:1
position: 391133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391384:1
position: 391384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:391828-391961:1:exon

position:391828:1
position: 391828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391961:1
position: 391961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:393492-393650:1:exon

position:393492:1
position: 393492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393650:1
position: 393650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:393995-394130:1:exon

position:393995:1
position: 393995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394130:1
position: 394130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:394515-394633:1:exon

position:394515:1
position: 394515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394633:1
position: 394633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:396208-396288:1:exon

position:396208:1
position: 396208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396288:1
position: 396288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:396456-396520:1:exon

position:396456:1
position: 396456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396520:1
position: 396520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:397971-398059:1:exon

position:397971:1
position: 397971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398059:1
position: 398059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:398838-399119:1:exon

position:398838:1
position: 398838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup133
translation: MAAQRGEQLGELVAVFGSERGASHTSPGNRWPRPLICIRSADGACATGSARDVYPPVMKESVAPPTHLHPKRRRRLRNWLRTGSPRAPAHWLLAGRRGRLTSPRGAPAFRPEESAMFAGSASPRPPGPGPRRGPASAPRPPGRKSLALGPAAGGPGLSVFSPGGRRGGGGGGGGGSLSARGTPTRTGQHQSVGETANYDIKTFGSSLPVKVMEALAMAEVDDQLTACVDESGWAWLVCKERLIVWKIGQSSVAKLSVCKELQLPPSDLDWNADLVALSCPAPPGEAPSAQSVAVMAATREGAVRYWPSLGHEGSFTETVIDLGGADRTCSFLTAVKGGSFVLATSGSQLFRLLPEGSGKIPHHALPQGQGVLSGIGRRVSSLLGILSPSSDVMLSSVLWDREREVLYTLTSSNINKWEMDDSSERQALSWDVNRALKENIADAIWGSESNYEGIKSGVNVEYLDLQQTCDGLVILAAAWHPGDSPCLMYYTLVTVEDAGYQMADEVTVEVTQFNPPFQGEESAMCRLVVPDASAQGAFLYTENAVFACSTGTGRSSLPQEKILFEAQGDGILGAGSCAGLPVFFSRNNGLVSILSRESISVLPEDVEDSITSSVAGPHPEPSLLDSTTKIDAVSQEDKTKLLKAAFLQYCRKDLEQAQSMVDELFSPDADSETEVDRAVTQISVDLVDDYPASDPRWAESVPEEAAGFSNTSLILLHQLEDKMKAHSFLVDFIHQMGLFERLGTFPVRGAPMATRLLLCEHAEKLATAIVLKNHHSRLPDLVNTALLIALNKRECDVPPSLTPADVFFREVSQVDTIFECLLEEEERVLKETPMESAEWAQLVVSVNSILKDMLHAASQYRHSRSSLYTGDVPADKEPEYVPWTASSGPSGVRTAIIRQHEIVLKGVYPQVDSNLRGMLTEQLVALIDSVLDGYVAQLKSVDGPGNRERYSTLEMEYTQRRSDLLSPLLHLGQHQWAASLAEKYCDFDILVQLCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVAQHGQLASFLQAHDHLSWLHEIHSQDLEKAHATLQGLANTETRYFAKKKTLLGLSKLVALASDFPEDVLQEKIEEMCEQERFLLHQETLPEQLLAEKQMTLNTMPVLTAPQLIGLYICDENTRANEYDFKKALDLLEYINEEEDVDINGLKLKILCRALQRDTWSSAEGKDDPIEASKESIFVKILQKLVNEGVRLSDYLPEVKDLLQADELGNLKSNPYFEFALKANYELYVQGQM
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: join(369241..369323,370596..370762,371510..371798,374866..374984,376603..376706,377853..377960,379230..379367,381844..382014,382696..382851,382933..383003,383357..383504,383750..383897,384916..385073,385773..385864,386604..386761,387337..387431,387911..388135,388928..389050,389745..389844,391133..391384,391828..391961,393492..393650,393995..394130,394515..394633,396208..396288,396456..396520,397971..398059,398838..398974)
location: region:369241-398974:1
so has part: feature:369241-369323:1:exon
so has part: feature:370596-370762:1:exon
so has part: feature:371510-371798:1:exon
so has part: feature:374866-374984:1:exon
so has part: feature:376603-376706:1:exon
so has part: feature:377853-377960:1:exon
so has part: feature:379230-379367:1:exon
so has part: feature:381844-382014:1:exon
so has part: feature:382696-382851:1:exon
so has part: feature:382933-383003:1:exon
so has part: feature:383357-383504:1:exon
so has part: feature:383750-383897:1:exon
so has part: feature:384916-385073:1:exon
so has part: feature:385773-385864:1:exon
so has part: feature:386604-386761:1:exon
so has part: feature:387337-387431:1:exon
so has part: feature:387911-388135:1:exon
so has part: feature:388928-389050:1:exon
so has part: feature:389745-389844:1:exon
so has part: feature:391133-391384:1:exon
so has part: feature:391828-391961:1:exon
so has part: feature:393492-393650:1:exon
so has part: feature:393995-394130:1:exon
so has part: feature:394515-394633:1:exon
so has part: feature:396208-396288:1:exon
so has part: feature:396456-396520:1:exon
so has part: feature:397971-398059:1:exon
so has part: feature:398838-398974:1:exon

XP_038617314.1
type: Protein
SIO_000068: ncbiprotein

position:398974:1
position: 398974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369241-369323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370596-370762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371510-371798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374866-374984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376603-376706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377853-377960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379230-379367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381844-382014:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382696-382851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382933-383003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:383357-383504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:383750-383897:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384916-385073:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:385773-385864:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:386604-386761:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:387337-387431:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:387911-388135:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:388928-389050:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:389745-389844:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:391133-391384:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:391828-391961:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:393492-393650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:393995-394130:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:394515-394633:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:396208-396288:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:396456-396520:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:397971-398059:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:398838-398974:1:exon

ACTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 407924..417011
location: region:407924-417011:1
so has part: feature:407924-417011:1:exon
subclass of: SO_0000010

119940836
type: Gene
SIO_000068: ncbigene

position:407924:1
position: 407924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417011:1
position: 417011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407924-417011:1:exon

ACTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ACTA1
product: actin alpha 1, skeletal muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 114 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761186.1
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: join(407924..408020,410542..410682,411645..411969,412923..413084,413421..413612,415111..415292,416644..417011)
location: region:407924-417011:1
so has part: feature:407924-408020:1:exon
so has part: feature:410542-410682:1:exon
so has part: feature:411645-411969:1:exon
so has part: feature:412923-413084:1:exon
so has part: feature:413421-413612:1:exon
so has part: feature:415111-415292:1:exon
so has part: feature:416644-417011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407924-408020:1:exon

position:408020:1
position: 408020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410542-410682:1:exon

position:410542:1
position: 410542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410682:1
position: 410682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411645-411969:1:exon

position:411645:1
position: 411645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411969:1
position: 411969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412923-413084:1:exon

position:412923:1
position: 412923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413084:1
position: 413084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413421-413612:1:exon

position:413421:1
position: 413421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413612:1
position: 413612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415111-415292:1:exon

position:415111:1
position: 415111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415292:1
position: 415292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:416644-417011:1:exon

position:416644:1
position: 416644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: join(410554..410682,411645..411969,412923..413084,413421..413612,415111..415292,416644..416787)
location: region:410554-416787:1
so has part: feature:410554-410682:1:exon
so has part: feature:411645-411969:1:exon
so has part: feature:412923-413084:1:exon
so has part: feature:413421-413612:1:exon
so has part: feature:415111-415292:1:exon
so has part: feature:416644-416787:1:exon

XP_038617114.1
type: Protein
SIO_000068: ncbiprotein

position:410554:1
position: 410554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416787:1
position: 416787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410554-410682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411645-411969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412923-413084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413421-413612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:415111-415292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416644-416787:1:exon

LOC119940855
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119940855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 424034..433017
location: region:424034-433017:1
so has part: feature:424034-433017:1:exon
subclass of: SO_0000010

119940855
type: Gene
SIO_000068: ncbigene

position:424034:1
position: 424034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433017:1
position: 433017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424034-433017:1:exon

LOC119940855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119940855
product: centriole, cilia and spindle associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038761206.1
SIO_010081: LOC119940855
subclass of: SO_0000673
so part of: LOC119940855
location: join(424034..424235,429999..430264,432391..433017)
location: region:424034-433017:1
so has part: feature:424034-424235:1:exon
so has part: feature:429999-430264:1:exon
so has part: feature:432391-433017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424034-424235:1:exon

position:424235:1
position: 424235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429999-430264:1:exon

position:429999:1
position: 429999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430264:1
position: 430264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432391-433017:1:exon

position:432391:1
position: 432391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119940855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119940855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein
translation: MGPGRRVRSEYMKRFQAPPWEACGPRYRELLRYRRARRLLEQAHWPWPAAGPPEPPPGPRGPEPQPKESLEPGEQRQSEEPAEKNEVDKQMGPRGAPRRPSALPDRGDQKPPGSPQRAARVRENKHPFALYGWGEKQTDTGAQKTHNVCASASTREIHASAIRAKNRNQAEKRKMGNERQRNPAEDGEKPRRAKPPSAESPWVTEYMRCYSARVR
SIO_010081: LOC119940855
subclass of: SO_0000673
so part of: LOC119940855
location: join(424034..424235,429999..430264,432391..432570)
location: region:424034-432570:1
so has part: feature:424034-424235:1:exon
so has part: feature:429999-430264:1:exon
so has part: feature:432391-432570:1:exon

XP_038617134.1
type: Protein
SIO_000068: ncbiprotein

position:432570:1
position: 432570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424034-424235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429999-430264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432391-432570:1:exon

RAB4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(437680..453568)
location: region:437680-453568:-1
so has part: feature:437680-453568:-1:exon
subclass of: SO_0000010

119940763
type: Gene
SIO_000068: ncbigene

position:437680:-1
position: 437680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453568:-1
position: 453568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437680-453568:-1:exon

RAB4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RAB4A
product: RAB4A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761060.1
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: complement(join(437680..438258,439212..439353,440665..440760,443258..443412,445024..445086,447235..447349,448284..448364,453416..453568))
location: region:437680-453568:-1
so has part: feature:453416-453568:-1:exon
so has part: feature:448284-448364:-1:exon
so has part: feature:447235-447349:-1:exon
so has part: feature:445024-445086:-1:exon
so has part: feature:443258-443412:-1:exon
so has part: feature:440665-440760:-1:exon
so has part: feature:439212-439353:-1:exon
so has part: feature:437680-438258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453416-453568:-1:exon

position:453416:-1
position: 453416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448284-448364:-1:exon

position:448284:-1
position: 448284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448364:-1
position: 448364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447235-447349:-1:exon

position:447235:-1
position: 447235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447349:-1
position: 447349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445024-445086:-1:exon

position:445024:-1
position: 445024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445086:-1
position: 445086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443258-443412:-1:exon

position:443258:-1
position: 443258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443412:-1
position: 443412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440665-440760:-1:exon

position:440665:-1
position: 440665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440760:-1
position: 440760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:439212-439353:-1:exon

position:439212:-1
position: 439212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439353:-1
position: 439353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:437680-438258:-1:exon

position:438258:-1
position: 438258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A
translation: MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAQSVQDCGC
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: complement(join(439238..439353,440665..440760,443258..443412,445024..445086,447235..447349,448284..448364,453416..453446))
location: region:439238-453446:-1
so has part: feature:453416-453446:-1:exon
so has part: feature:448284-448364:-1:exon
so has part: feature:447235-447349:-1:exon
so has part: feature:445024-445086:-1:exon
so has part: feature:443258-443412:-1:exon
so has part: feature:440665-440760:-1:exon
so has part: feature:439238-439353:-1:exon

XP_038616988.1
type: Protein
SIO_000068: ncbiprotein

position:439238:-1
position: 439238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453446:-1
position: 453446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453416-453446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448284-448364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447235-447349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445024-445086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443258-443412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440665-440760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439238-439353:-1:exon

RHOU
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490505..503839)
location: region:490505-503839:-1
so has part: feature:490505-503839:-1:exon
subclass of: SO_0000010

119940921
type: Gene
SIO_000068: ncbigene

position:490505:-1
position: 490505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503839:-1
position: 503839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490505-503839:-1:exon

RHOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RHOU
product: ras homolog family member U
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761314.1
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: complement(join(490505..492319,499269..499327,503452..503839))
location: region:490505-503839:-1
so has part: feature:503452-503839:-1:exon
so has part: feature:499269-499327:-1:exon
so has part: feature:490505-492319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503452-503839:-1:exon

position:503452:-1
position: 503452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499269-499327:-1:exon

position:499269:-1
position: 499269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499327:-1
position: 499327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490505-492319:-1:exon

position:492319:-1
position: 492319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoU
translation: MPPQQQPGAAAAAAYPGKSGWRPGGCEGPPVPPRRRPRRGAAEARGLKCVLVGDGAVGKTSLVVSYTTNGYPTDYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYAHADVFLLCFSVVSPASFQNIREKWVPEVRRHCPGAPVVLVGTQCDLRQDVGVLIELDRGREKPVAGQAARLCADEVGAAAYVECSALTQKNLKEVFDAAILAGIRFSDAQRLHQQPKKAKSRTPDKMKTLSKAWWKKYCCLA
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: complement(join(491855..492319,499269..499327,503452..503704))
location: region:491855-503704:-1
so has part: feature:503452-503704:-1:exon
so has part: feature:499269-499327:-1:exon
so has part: feature:491855-492319:-1:exon

XP_038617242.1
type: Protein
SIO_000068: ncbiprotein

position:491855:-1
position: 491855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503704:-1
position: 503704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503452-503704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499269-499327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491855-492319:-1:exon

LOC119940972
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119940972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504214..513994
location: region:504214-513994:1
so has part: feature:504214-513994:1:exon
subclass of: SO_0000010

119940972
type: Gene
SIO_000068: ncbigene

position:504214:1
position: 504214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513994:1
position: 513994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504214-513994:1:exon

LOC119940972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119940972
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038761387.1
SIO_010081: LOC119940972
subclass of: SO_0000673
so part of: LOC119940972
location: join(504214..504346,508045..508196,512871..512898,512994..513308,513486..513994)
location: region:504214-513994:1
so has part: feature:504214-504346:1:exon
so has part: feature:508045-508196:1:exon
so has part: feature:512871-512898:1:exon
so has part: feature:512994-513308:1:exon
so has part: feature:513486-513994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504214-504346:1:exon

position:504346:1
position: 504346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508045-508196:1:exon

position:508045:1
position: 508045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508196:1
position: 508196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512871-512898:1:exon

position:512871:1
position: 512871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512898:1
position: 512898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:512994-513308:1:exon

position:512994:1
position: 512994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513308:1
position: 513308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:513486-513994:1:exon

position:513486:1
position: 513486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119940972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119940972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
translation: MSGTPLDQSPRPGLSDARHSPTNPRGPAGVTSGTPLDQSPRPGRMDERNRSEKKGLDEPGQTERAGPRLWPRLATFGRIWLAGAPPPPSWTPSSPRRKKAASRASADYYCLFPSLSSSKCPGPADLYRTRELRAIAAGHPDRGSLEERAPACFHSADTSGLPRLKSPQSLGTAETPQNAPGLARGAAEWVDPQGRGTPTLGEGQAGGSVRSPEAAFPADFSPHRIRLEGRPSPGAGLSPATRSLGAAAPSPIRQEDGGHRAPPGAPCRPVGLSSVRRFHLELSGGRGRSDPSPGSAGREKNVTRSPPKPLSPRHRGRLGPSLQTRGRTGRPMVIRHPRGLCAGRRPERRQTRVGPGVGTPPGPSTPGVRPRPAHPPPE
SIO_010081: LOC119940972
subclass of: SO_0000673
so part of: LOC119940972
location: join(504214..504346,508045..508196,512871..512898,512994..513308,513486..513994)
location: region:504214-513994:1
so has part: feature:504214-504346:1:exon
so has part: feature:508045-508196:1:exon
so has part: feature:512871-512898:1:exon
so has part: feature:512994-513308:1:exon
so has part: feature:513486-513994:1:exon

XP_038617315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504214-504346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508045-508196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512871-512898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512994-513308:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513486-513994:1:exon

EXOC8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(514031..517867)
location: region:514031-517867:-1
so has part: feature:514031-517867:-1:exon
subclass of: SO_0000010

119940790
type: Gene
SIO_000068: ncbigene

position:514031:-1
position: 514031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517867:-1
position: 517867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514031-517867:-1:exon

EXOC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EXOC8
product: exocyst complex component 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038761121.1
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(join(514031..516293,517849..517867))
location: region:514031-517867:-1
so has part: feature:517849-517867:-1:exon
so has part: feature:514031-516293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517849-517867:-1:exon

position:517849:-1
position: 517849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514031-516293:-1:exon

position:516293:-1
position: 516293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EXOC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 8
translation: MAEAGASRLRRQLEWSGFEAGLYVKQLSQQSDGDRDLQEHRQRIQALADETAHSLKRNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSSLESLPLSLLPAAAAVAATTAGQASEEDEAEPVEAGRQRTLTTLLEKVEGCRPLLDAPGQRLVYNGDLLEYEADHMAQLQRVHAFLLSDCLLVATWLPQRRGVYRYNALYPLDGLAVVNVKDNPPTRDMFKLLVFPESRTFQAENAKVKREWLEELEGAKRALAGQRRRQQQEAAAPRPPPAPANPFDDDDDDEEEEEDGQQAREAAATAAAAATPEWVRELPEDLDVCIAQRDFEGAVDLLDKLDRHLRDGPGPPAAVQELRARVGERVRQLTDVLVFELSPGRSLRGGPRATRRAVSQLIRLGQGTKACELFLRNRAAAVHGAIRQLRIEGSTLLYIHKLCHVFFTSLLETAREFETDFAGAHGGGGGGGGGCYSALVVWARAAVGLFVDAFSEQVFDSKESLSTAAECVKVAQEHCRRLGALGLDLTFVVHALLVKDIRGALHGYKEVVVEAARHRNSEETWRRMNLLTPEALAKLKEEMRQCGVGDSFDQYAGQDGCWVGLSYTVVAFTKQTMGFLDEALKLYCPELHMVLLESLVEVIRVALQHVDYSLRCEQDPDKKAFIRQNATFLYQTVLPAVERRFEDGVGKPARQLQDLRSGSWLVRVNPESTTSVV
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(514105..516234)
location: region:514105-516234:-1
so has part: feature:514105-516234:-1:exon

XP_038617049.1
type: Protein
SIO_000068: ncbiprotein

position:514105:-1
position: 514105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516234:-1
position: 516234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514105-516234:-1:exon

SPRTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 520476..526544
location: region:520476-526544:1
so has part: feature:520476-526544:1:exon
subclass of: SO_0000010

119940621
type: Gene
SIO_000068: ncbigene

position:520476:1
position: 520476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526544:1
position: 526544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520476-526544:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SPRTN
product: SprT-like N-terminal domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038760834.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(520476..520814,522511..522610,523956..524084,525000..525267,525662..526544)
location: region:520476-526544:1
so has part: feature:520476-520814:1:exon
so has part: feature:522511-522610:1:exon
so has part: feature:523956-524084:1:exon
so has part: feature:525000-525267:1:exon
so has part: feature:525662-526544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520476-520814:1:exon

position:520814:1
position: 520814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522511-522610:1:exon

position:522511:1
position: 522511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522610:1
position: 522610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523956-524084:1:exon

position:523956:1
position: 523956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524084:1
position: 524084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525000-525267:1:exon

position:525000:1
position: 525000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525267:1
position: 525267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525662-526544:1:exon

position:525662:1
position: 525662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent metalloprotease SPRTN
translation: MEEGDEELVLALQLQEEWDARRPSGGRSGPSGPSGPPSGAEAPLSPVDAAWELLDPTPDLRALFVHFNQRFFWGRLAAVEVKWSPRMTLCAGLCSYEGWGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTHNDKDREGHGPEFCKHMHRINRLTGANVTIYHTFHDEVDQYRQHWWRCDGPCRHRNPYFGYVKRATNRAPSAQDFWWEEHQRTCGGSYVKVKEPEGYAQKGKAKTKAPGQLQAPSGAGGTPSRPVGSPQPVTPFSGKGYLLGGSSSTSRPTSTWPGTGGLGDPKPAGPRAPQSGTPRPGGQQSVLNFPKISVANRHTFCNVDGSPRKGPAGVALGTGDGLPPKRPRLEDRTAFANYFTKKTPPSSTGVSGGAQPVPLPAPASPSPPTLTVRCPVCQMQLPESQINTHLDSCLTG
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(520549..520814,522511..522610,523956..524084,525000..525267,525662..526191)
location: region:520549-526191:1
so has part: feature:520549-520814:1:exon
so has part: feature:522511-522610:1:exon
so has part: feature:523956-524084:1:exon
so has part: feature:525000-525267:1:exon
so has part: feature:525662-526191:1:exon

XP_038616762.1
type: Protein
SIO_000068: ncbiprotein

position:520549:1
position: 520549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526191:1
position: 526191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520549-520814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522511-522610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523956-524084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525000-525267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525662-526191:1:exon

EGLN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(528587..555723)
location: region:528587-555723:-1
so has part: feature:528587-555723:-1:exon
subclass of: SO_0000010

119940622
type: Gene
SIO_000068: ncbigene

position:528587:-1
position: 528587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555723:-1
position: 555723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528587-555723:-1:exon

EGLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EGLN1
product: egl-9 family hypoxia inducible factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038760835.1
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(528587..529424,530400..530467,530888..531024,534542..534661,554754..555723))
location: region:528587-555723:-1
so has part: feature:554754-555723:-1:exon
so has part: feature:534542-534661:-1:exon
so has part: feature:530888-531024:-1:exon
so has part: feature:530400-530467:-1:exon
so has part: feature:528587-529424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554754-555723:-1:exon

position:554754:-1
position: 554754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534542-534661:-1:exon

position:534542:-1
position: 534542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534661:-1
position: 534661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530888-531024:-1:exon

position:530888:-1
position: 530888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531024:-1
position: 531024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530400-530467:-1:exon

position:530400:-1
position: 530400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530467:-1
position: 530467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:528587-529424:-1:exon

position:529424:-1
position: 529424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 1
translation: MAHDSGGSERDRQYCELCGKMENLLRCARCRSSFYCSKEHQRQDWKKHKLICGHGGPAEQPPPTAPPPAPAPPPPPPAAAAAASSGPDEPVYPPGGPRPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGRETGQRIGDEVRALRDTGRFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCRAIGRLMSSMDDLIRHCNGKLGNYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAFATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVL
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(529360..529424,530400..530467,530888..531024,534542..534661,554754..555398))
location: region:529360-555398:-1
so has part: feature:554754-555398:-1:exon
so has part: feature:534542-534661:-1:exon
so has part: feature:530888-531024:-1:exon
so has part: feature:530400-530467:-1:exon
so has part: feature:529360-529424:-1:exon

XP_038616763.1
type: Protein
SIO_000068: ncbiprotein

position:529360:-1
position: 529360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555398:-1
position: 555398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554754-555398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534542-534661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530888-531024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530400-530467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529360-529424:-1:exon

TSNAX
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 572857..587262
location: region:572857-587262:1
so has part: feature:572857-587262:1:exon
subclass of: SO_0000010

119940761
type: Gene
SIO_000068: ncbigene

position:572857:1
position: 572857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587262:1
position: 587262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572857-587262:1:exon

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TSNAX
product: translin associated factor X
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761057.1
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(572857..572947,574634..574738,576540..576654,577669..577799,583927..584057,584952..587262)
location: region:572857-587262:1
so has part: feature:572857-572947:1:exon
so has part: feature:574634-574738:1:exon
so has part: feature:576540-576654:1:exon
so has part: feature:577669-577799:1:exon
so has part: feature:583927-584057:1:exon
so has part: feature:584952-587262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572857-572947:1:exon

position:572947:1
position: 572947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574634-574738:1:exon

position:574634:1
position: 574634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574738:1
position: 574738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576540-576654:1:exon

position:576540:1
position: 576540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576654:1
position: 576654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577669-577799:1:exon

position:577669:1
position: 577669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577799:1
position: 577799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583927-584057:1:exon

position:583927:1
position: 583927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584057:1
position: 584057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584952-587262:1:exon

position:584952:1
position: 584952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X
translation: MSGKEGPGGFRKRKHDNFPHGPRREGKDEGSSSAVMASFKLFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDAEEILTESESKLEAVRQKMKQVAQELLGEDLHQFHRAITPGLQEYVEAVSFQHFIKTRSLISVEEINRQLVFVTEAPGEEEKQTLSPAAQSGPPGPCSLQVTPVDYLLGVADLTGELMRLCISSVGNGDMDTPFEVSCFLRQVYDGFSFIGNTGPYEVSKKLYVLKQSLGKVENACYALKVRGSEIPKHMLADVFATKADPIDREEGIA
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(572932..572947,574634..574738,576540..576654,577669..577799,583927..584057,584952..585329)
location: region:572932-585329:1
so has part: feature:572932-572947:1:exon
so has part: feature:574634-574738:1:exon
so has part: feature:576540-576654:1:exon
so has part: feature:577669-577799:1:exon
so has part: feature:583927-584057:1:exon
so has part: feature:584952-585329:1:exon

XP_038616985.1
type: Protein
SIO_000068: ncbiprotein

position:572932:1
position: 572932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585329:1
position: 585329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572932-572947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574634-574738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576540-576654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577669-577799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583927-584057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584952-585329:1:exon

DISC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603046..623467
location: region:603046-623467:1
so has part: feature:603046-623467:1:exon
subclass of: SO_0000010

119940570
type: Gene
SIO_000068: ncbigene

position:603046:1
position: 603046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623467:1
position: 623467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603046-623467:1:exon

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DISC1
product: DISC1 scaffold protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038760737.1
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(603046..603121,607037..607860,608055..608142,611258..611381,613135..613243,613375..613526,615377..615431,615748..615838,617890..617950,620267..620447,620903..621020,623063..623467)
location: region:603046-623467:1
so has part: feature:603046-603121:1:exon
so has part: feature:607037-607860:1:exon
so has part: feature:608055-608142:1:exon
so has part: feature:611258-611381:1:exon
so has part: feature:613135-613243:1:exon
so has part: feature:613375-613526:1:exon
so has part: feature:615377-615431:1:exon
so has part: feature:615748-615838:1:exon
so has part: feature:617890-617950:1:exon
so has part: feature:620267-620447:1:exon
so has part: feature:620903-621020:1:exon
so has part: feature:623063-623467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603046-603121:1:exon

position:603121:1
position: 603121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607037-607860:1:exon

position:607037:1
position: 607037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607860:1
position: 607860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608055-608142:1:exon

position:608055:1
position: 608055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608142:1
position: 608142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611258-611381:1:exon

position:611258:1
position: 611258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611381:1
position: 611381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613135-613243:1:exon

position:613135:1
position: 613135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613243:1
position: 613243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613375-613526:1:exon

position:613375:1
position: 613375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613526:1
position: 613526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615377-615431:1:exon

position:615377:1
position: 615377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615431:1
position: 615431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615748-615838:1:exon

position:615748:1
position: 615748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615838:1
position: 615838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:617890-617950:1:exon

position:617890:1
position: 617890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617950:1
position: 617950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:620267-620447:1:exon

position:620267:1
position: 620267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620447:1
position: 620447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:620903-621020:1:exon

position:620903:1
position: 620903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621020:1
position: 621020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:623063-623467:1:exon

position:623063:1
position: 623063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DISC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: disrupted in schizophrenia 1 protein
translation: MVGGGRSSELTPDVQGWALAASPARRRKKLTRRPGYMRAEFQPPSESRLPSSWTPPSSRTPELGRPLRPESVPQTGPCPWAPGSGCWTLPEANRPHGPPPPSPGGTRWALQLGPEARPGTSGPGAVWPMETPSPGPRDAPEPPPAMLGALDSNFSFIRLALLAAEERGKVEGCVPPRARGPSLEQACPGLPGPARGPQRGEDTSGAPAVPGGAALPRPTSPQTAVWGVHQPPGSLRLDSSASGPARPPETPGWGRSEMAAEVRDPLIQKDEPQAPPTCQHSKRAALWVGTLLGALWGWLRGRLEDSSAVEDDGFASETRQREAEEEEAEAPPLQPGAGVISEQVGGRLRAAVSGDAHLVDGGGLRPLPGTGSGLGSPASPSRLSRLLHQRQRVQREMVGLQARLHVLEAQERRLKRAIADLGXAGEMPVPTRVAPLXPEPPGIIKGPGERDQTIHRPARGTAIKVHAHRELSRAARDGEAAPPALRGYQAEARAETGGQDNAVKYTKKPEDDLQSPGRPVLQRVQEADLEACQLLIREFQLAEGCAGNTGREQQEEEEEQVTVAAPLRAGGNLPEDLPLSAEELGGWCGAIREKLGLLEEGLHVAMGTGDHGLVPILGREVQAVKETLLALVVRLRTEAEAGQEEVVGPLCRSGRASGDAGWTG
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(603085..603121,607037..607860,608055..608142,611258..611381,613135..613243,613375..613526,615377..615431,615748..615838,617890..617950,620267..620447,620903..621020,623063..623214)
location: region:603085-623214:1
so has part: feature:603085-603121:1:exon
so has part: feature:607037-607860:1:exon
so has part: feature:608055-608142:1:exon
so has part: feature:611258-611381:1:exon
so has part: feature:613135-613243:1:exon
so has part: feature:613375-613526:1:exon
so has part: feature:615377-615431:1:exon
so has part: feature:615748-615838:1:exon
so has part: feature:617890-617950:1:exon
so has part: feature:620267-620447:1:exon
so has part: feature:620903-621020:1:exon
so has part: feature:623063-623214:1:exon

XP_038616665.1
type: Protein
SIO_000068: ncbiprotein

position:603085:1
position: 603085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623214:1
position: 623214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603085-603121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607037-607860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608055-608142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611258-611381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613135-613243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613375-613526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615377-615431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615748-615838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617890-617950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:620267-620447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620903-621020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623063-623214:1:exon

SIPA1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(630441..685436)
location: region:630441-685436:-1
so has part: feature:630441-685436:-1:exon
subclass of: SO_0000010

119940912
type: Gene
SIO_000068: ncbigene

position:630441:-1
position: 630441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685436:-1
position: 685436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630441-685436:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761307.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(630441..630607,630913..630994,631257..631380,631619..631672,632634..632750,635399..635600,638310..638457,638638..638862,639057..639397,641893..641996,642486..642580,643017..643100,644331..644869,645023..645602,646954..647111,647820..647923,649272..649446,650159..650347,652224..652357,654008..655595,685373..685436))
location: region:630441-685436:-1
so has part: feature:685373-685436:-1:exon
so has part: feature:654008-655595:-1:exon
so has part: feature:652224-652357:-1:exon
so has part: feature:650159-650347:-1:exon
so has part: feature:649272-649446:-1:exon
so has part: feature:647820-647923:-1:exon
so has part: feature:646954-647111:-1:exon
so has part: feature:645023-645602:-1:exon
so has part: feature:644331-644869:-1:exon
so has part: feature:643017-643100:-1:exon
so has part: feature:642486-642580:-1:exon
so has part: feature:641893-641996:-1:exon
so has part: feature:639057-639397:-1:exon
so has part: feature:638638-638862:-1:exon
so has part: feature:638310-638457:-1:exon
so has part: feature:635399-635600:-1:exon
so has part: feature:632634-632750:-1:exon
so has part: feature:631619-631672:-1:exon
so has part: feature:631257-631380:-1:exon
so has part: feature:630913-630994:-1:exon
so has part: feature:630441-630607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685373-685436:-1:exon

position:685373:-1
position: 685373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:654008-655595:-1:exon

position:654008:-1
position: 654008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655595:-1
position: 655595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652224-652357:-1:exon

position:652224:-1
position: 652224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652357:-1
position: 652357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:650159-650347:-1:exon

position:650159:-1
position: 650159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650347:-1
position: 650347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649272-649446:-1:exon

position:649272:-1
position: 649272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649446:-1
position: 649446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:647820-647923:-1:exon

position:647820:-1
position: 647820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647923:-1
position: 647923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:646954-647111:-1:exon

position:646954:-1
position: 646954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647111:-1
position: 647111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:645023-645602:-1:exon

position:645023:-1
position: 645023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645602:-1
position: 645602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:644331-644869:-1:exon

position:644331:-1
position: 644331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644869:-1
position: 644869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:643017-643100:-1:exon

position:643017:-1
position: 643017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643100:-1
position: 643100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:642486-642580:-1:exon

position:642486:-1
position: 642486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642580:-1
position: 642580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641893-641996:-1:exon

position:641893:-1
position: 641893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641996:-1
position: 641996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:639057-639397:-1:exon

position:639057:-1
position: 639057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639397:-1
position: 639397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638638-638862:-1:exon

position:638638:-1
position: 638638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638862:-1
position: 638862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:638310-638457:-1:exon

position:638310:-1
position: 638310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638457:-1
position: 638457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:635399-635600:-1:exon

position:635399:-1
position: 635399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635600:-1
position: 635600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:632634-632750:-1:exon

position:632634:-1
position: 632634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632750:-1
position: 632750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:631619-631672:-1:exon

position:631619:-1
position: 631619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631672:-1
position: 631672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:631257-631380:-1:exon

position:631257:-1
position: 631257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631380:-1
position: 631380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:630913-630994:-1:exon

position:630913:-1
position: 630913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630994:-1
position: 630994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:630441-630607:-1:exon

position:630607:-1
position: 630607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SIPA1L2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 2
translation: MSDPPRPGRAAPGFQDPGPRAGPADDYFARKFRAPNGGPGPPAPLAAAPRGESGSPANGTPAVPKMGVRARVSEWPPRKDGAKEPGGRAPREGREAVAGYGSAEAAPPDVAPRAAGPTLGDAFGPAPPPRGLHPVRQRSNSDVTLSDLDADEALGPRATKPGPGAPLRREYGSTSSIDRQGLAAAEYFLAGLRGGRAEGPRGPPDLFPRPVRGPAPLVSPSLHAAARISRGELGRLAGLDRPDPGAPPAPGERGSSGPRRPRAEPAEPSLFRRLRAARGEPEAPGKAPDGGGVARPCSRHRCFAHYDVQSILFDIDQAVTARANAGKRKNLATGASAASQAGATGGGGGSPLGSREDLNSRESPEADAGDGKSNELLLSCPHFRNETGGEGERRIGLSRASAAPRAAGEGGSFESSLSSHCTNAGVSVLEVPRESQLPPREKVKRYIIEHVDLGAYYYRKFFYGKEHQNYFGTDENLGPVAVSIRREKVDDTKDKDGSQFHYRVVFRTSELTTLRGAILEDAVPCSGRPGPARGLPAREVLECLVPELGLHCLRLAVSSPSVAEQLLRLDEQGLSFQHKVGILYCRAGQGSEEEMYNNEAAGPAFDQFLDLLGQRVRLRGFTKYRAQLDTKTDSTGTHSLYTTYKDYELMFHVCTMLPFMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPQTIRSHFQHVFVIVRVHHPCTENVCYSIGVSRSRDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRLEYLRDLAENSVTAATLDASSAKFSFITLGAKRREKARPRPDAHLASAGAVTWSVVARDFGRSADIACLLGVSGEFLVLVERESKDVVFNCSCRDVIGWTSGWTSVKVFYERGQCVLLSAADRRGDDVREVVRRLEMVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVSTLTHEQMIDLLRTSVTVKVVIIHPHEDGSPRRGCSELCRVPLVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPAPAGQPPARASPALGPPDGIPAQQLQRHSRAALPRSTSFDRKLPDGARSSPSNQSSSSDPGPSGSSHWRQPIGYDGCQSPLLQELQGPPECEEAREQEEILDGTRHPEIKWPGLPPAVLSSYSEQALPKEGSVHDCSHKLSLIGERACSSCASSSSSSSSSSSACGHSEDRALDAADLLDADPRGPPSYGKGASSDSGQADPAPRPPTALLGPVHLPARAEPWAEPVAGPQREPTPGSPGPGTSDGDFSPASSLSSGSQRSGSPAGRCPKSGGSLDASKVYIVSHGGGQQAAGSVAQPFHRLGAGGAYVIGWKRSESSPTPEEVEAIECQGLCGGMDGLCVPSVPEEDHDPPDGQSGLAKDDLLKLLFPGSPGREEGWRKFSVSGSPSPRRSLYRTLSDESVSSVRRDSRSSVLDRALPNDILFSTTPPYLSSLPPGSAVPPPPGLTGEFWLSDPSGFTDPRLLPLPNAASGLDWSHLVDAARAFEGLDSDEELRLDCPHTSCLDQRATSFCSLTDLEPGQDPDEPQECVLDEDAADEARFVDSPGETVSSALTGKVNQLELILRQLQTDLRKEKQDKAALQAEVQHLRRDNQRLQEESQAATAQLRKFTDWFFNSVDRKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(630461..630607,630913..630994,631257..631380,631619..631672,632634..632750,635399..635600,638310..638457,638638..638862,639057..639397,641893..641996,642486..642580,643017..643100,644331..644869,645023..645602,646954..647111,647820..647923,649272..649446,650159..650347,652224..652357,654008..655404))
location: region:630461-655404:-1
so has part: feature:654008-655404:-1:exon
so has part: feature:652224-652357:-1:exon
so has part: feature:650159-650347:-1:exon
so has part: feature:649272-649446:-1:exon
so has part: feature:647820-647923:-1:exon
so has part: feature:646954-647111:-1:exon
so has part: feature:645023-645602:-1:exon
so has part: feature:644331-644869:-1:exon
so has part: feature:643017-643100:-1:exon
so has part: feature:642486-642580:-1:exon
so has part: feature:641893-641996:-1:exon
so has part: feature:639057-639397:-1:exon
so has part: feature:638638-638862:-1:exon
so has part: feature:638310-638457:-1:exon
so has part: feature:635399-635600:-1:exon
so has part: feature:632634-632750:-1:exon
so has part: feature:631619-631672:-1:exon
so has part: feature:631257-631380:-1:exon
so has part: feature:630913-630994:-1:exon
so has part: feature:630461-630607:-1:exon

XP_038617235.1
type: Protein
SIO_000068: ncbiprotein

position:630461:-1
position: 630461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655404:-1
position: 655404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654008-655404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652224-652357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650159-650347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649272-649446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647820-647923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646954-647111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645023-645602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644331-644869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:643017-643100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642486-642580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641893-641996:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639057-639397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638638-638862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638310-638457:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:635399-635600:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632634-632750:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631619-631672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:631257-631380:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:630913-630994:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:630461-630607:-1:exon

MAP10
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 724428..727108
location: region:724428-727108:1
so has part: feature:724428-727108:1:exon
subclass of: SO_0000010

119940897
type: Gene
SIO_000068: ncbigene

position:724428:1
position: 724428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727108:1
position: 727108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724428-727108:1:exon

MAP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MAP10
product: microtubule associated protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761280.1
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 724428..727108
location: region:724428-727108:1
so has part: feature:724428-727108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724428-727108:1:exon

MAP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 10
translation: MAARDAERMFALELLVDRVCLEARGLPPALGGFLPSVAFRLLDFPTLLVPAPPQAHPQPGIFAFGRGKSCLLRLGPAALVRMLGRAPLCALLLAPPAGGAAASPRLLGSCCVSLATVAGGHRGRYALRDLMGARVGDITLGFRLIDLGSCPVDHLLQEALPPDPEPQPQLPHPCPGDVEDGRPRMPRDALPGVGTQTPATPHRRRSSVDPDGMEPDTFCPPPLFYTRPVGEGAAPAASPGGPGPPPGAVGEARGGLREEAISGPSTEAPGKSDAAAARGHRPDGLRRLPLLRALLRELSLLDGRPEDGTPQDAATQAPEFSTRPAGQPVRQRDRCQARGRERSPGLPLKRDGGPGAEPPGSLLQARAGKGPEDGPKKAGGARENRRPRKKLVFGLTKTLRLRLGQTNPEVLLLHERRERAKKKRLETLRGRKFGSPSSRGKTFRPAEDNWEPVGKPGPVGNSDPIAPWGEKGGTLMPRDTEADSRGCLKEVENQRIEAQTGLSGEGEKVANKFSLQGSVSWTPGTVRSALGSDAQALPPGASPPDAGIQRDTIDQEVRDGPSQVKAPGFTGPSPEGNGPREASPLERYSDDFTSACSSGALSSADAGSGGSGTLRVRPELEGANPESAGAEADSQASASGTSGNTYGSGGTSAPLPPLSAASWSPSSSGTPRVASCPAPSPAGGDGSSVHGGPSPLWGRDGGQSAAPRARRNTGAESHRDTLGCQEATRWARALETSQSPRTSLVSSYVLTSSVSEEEVSAPNSPSSILSGEGVDKLGSLNMSSQYRDIRELVINKLPGYTV
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 724428..726836
location: region:724428-726836:1
so has part: feature:724428-726836:1:exon

XP_038617208.1
type: Protein
SIO_000068: ncbiprotein

position:726836:1
position: 726836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724428-726836:1:exon

NTPCR
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 742350..751947
location: region:742350-751947:1
so has part: feature:742350-751947:1:exon
subclass of: SO_0000010

119940713
type: Gene
SIO_000068: ncbigene

position:742350:1
position: 742350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751947:1
position: 751947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742350-751947:1:exon

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038760979.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(742350..742422,744085..744247,746897..746993,747095..747313,751628..751947)
location: region:742350-751947:1
so has part: feature:742350-742422:1:exon
so has part: feature:744085-744247:1:exon
so has part: feature:746897-746993:1:exon
so has part: feature:747095-747313:1:exon
so has part: feature:751628-751947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742350-742422:1:exon

position:742422:1
position: 742422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744085-744247:1:exon

position:744085:1
position: 744085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744247:1
position: 744247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746897-746993:1:exon

position:746897:1
position: 746897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746993:1
position: 746993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747095-747313:1:exon

position:747095:1
position: 747095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747313:1
position: 747313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:751628-751947:1:exon

position:751628:1
position: 751628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038760980.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(742350..742422,744085..744247,746897..746993,747095..747313,748438..748871)
location: region:742350-748871:1
so has part: feature:742350-742422:1:exon
so has part: feature:744085-744247:1:exon
so has part: feature:746897-746993:1:exon
so has part: feature:747095-747313:1:exon
so has part: feature:748438-748871:1:exon

position:748871:1
position: 748871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742350-742422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744085-744247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746897-746993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747095-747313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748438-748871:1:exon

position:748438:1
position: 748438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X1
translation: MARHVFLTGPPGVGKTTLVRKAVGALEAAGVPADGFYTEEVRQAGRRVGFDVVTLSGLRGPLSRVGSDPGPGSRAPRVGQYVVDVASLERLALPMLSPVDAGDGGGTAGKRVCVIDEVGKMELCSEAFVRSVRRVLAAPRLVVLGSIPLPKGRPLGLVEEIRARRDVALFVETCQPSLPPPVQDPGDLQRGRKQCGPVARAQAGESQGPALEAGPTCSPSRGGRAGPRALT
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(742389..742422,744085..744247,746897..746993,747095..747313,751628..751810)
location: region:742389-751810:1
so has part: feature:742389-742422:1:exon
so has part: feature:744085-744247:1:exon
so has part: feature:746897-746993:1:exon
so has part: feature:747095-747313:1:exon
so has part: feature:751628-751810:1:exon

XP_038616907.1
type: Protein
SIO_000068: ncbiprotein

position:742389:1
position: 742389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751810:1
position: 751810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742389-742422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744085-744247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746897-746993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747095-747313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751628-751810:1:exon

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X2
translation: MARHVFLTGPPGVGKTTLVRKAVGALEAAGVPADGFYTEEVRQAGRRVGFDVVTLSGLRGPLSRVGSDPGPGSRAPRVGQYVVDVASLERLALPMLSPVDAGDGGGTAGKRVCVIDEVGKMELCSEAFVRSVRRVLAAPRLVVLGSIPLPKGRPLGLVEEIRARRDVALFVVTRENRDRILDDIVAAVQGCRD
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(742389..742422,744085..744247,746897..746993,747095..747313,748438..748506)
location: region:742389-748506:1
so has part: feature:742389-742422:1:exon
so has part: feature:744085-744247:1:exon
so has part: feature:746897-746993:1:exon
so has part: feature:747095-747313:1:exon
so has part: feature:748438-748506:1:exon

XP_038616908.1
type: Protein
SIO_000068: ncbiprotein

position:748506:1
position: 748506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742389-742422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744085-744247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746897-746993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747095-747313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748438-748506:1:exon

PCNX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(750466..808851)
location: region:750466-808851:-1
so has part: feature:750466-808851:-1:exon
subclass of: SO_0000010

119940712
type: Gene
SIO_000068: ncbigene

position:750466:-1
position: 750466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808851:-1
position: 808851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750466-808851:-1:exon

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCNX2
product: pecanex 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038760976.1
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(750466..750766,751807..752231,757050..757255,759190..759464,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794659,794821..794966,796227..796350,796905..797985,800063..800186,801865..802070,808699..808851))
location: region:750466-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796905-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794659:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:759190-759464:-1:exon
so has part: feature:757050-757255:-1:exon
so has part: feature:751807-752231:-1:exon
so has part: feature:750466-750766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

position:808699:-1
position: 808699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

position:801865:-1
position: 801865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802070:-1
position: 802070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

position:800063:-1
position: 800063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800186:-1
position: 800186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796905-797985:-1:exon

position:796905:-1
position: 796905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797985:-1
position: 797985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

position:796227:-1
position: 796227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796350:-1
position: 796350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

position:794821:-1
position: 794821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794966:-1
position: 794966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794659:-1:exon

position:794566:-1
position: 794566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794659:-1
position: 794659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

position:793517:-1
position: 793517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793652:-1
position: 793652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

position:792296:-1
position: 792296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792438:-1
position: 792438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

position:790103:-1
position: 790103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790256:-1
position: 790256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

position:789123:-1
position: 789123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789155:-1
position: 789155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

position:787491:-1
position: 787491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787662:-1
position: 787662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

position:786315:-1
position: 786315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786425:-1
position: 786425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

position:784285:-1
position: 784285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784376:-1
position: 784376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

position:781205:-1
position: 781205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781314:-1
position: 781314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

position:780246:-1
position: 780246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780342:-1
position: 780342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

position:779949:-1
position: 779949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780041:-1
position: 780041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

position:779338:-1
position: 779338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779488:-1
position: 779488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

position:778718:-1
position: 778718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778859:-1
position: 778859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

position:778318:-1
position: 778318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778495:-1
position: 778495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

position:778091:-1
position: 778091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778199:-1
position: 778199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

position:777855:-1
position: 777855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777984:-1
position: 777984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

position:775673:-1
position: 775673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775731:-1
position: 775731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

position:774562:-1
position: 774562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774780:-1
position: 774780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

position:770516:-1
position: 770516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770769:-1
position: 770769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

position:768359:-1
position: 768359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768592:-1
position: 768592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

position:766755:-1
position: 766755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766858:-1
position: 766858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

position:766520:-1
position: 766520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766664:-1
position: 766664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

position:763413:-1
position: 763413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763643:-1
position: 763643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:759190-759464:-1:exon

position:759190:-1
position: 759190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759464:-1
position: 759464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:757050-757255:-1:exon

position:757050:-1
position: 757050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757255:-1
position: 757255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:751807-752231:-1:exon

position:751807:-1
position: 751807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752231:-1
position: 752231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:750466-750766:-1:exon

position:750766:-1
position: 750766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCNX2
product: pecanex 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038760975.1
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(750466..750766,751807..752231,757050..757255,759190..759464,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794659,794821..794966,796227..796350,796881..797985,800063..800186,801865..802070,808699..808851))
location: region:750466-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796881-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794659:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:759190-759464:-1:exon
so has part: feature:757050-757255:-1:exon
so has part: feature:751807-752231:-1:exon
so has part: feature:750466-750766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796881-797985:-1:exon

position:796881:-1
position: 796881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794659:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:759190-759464:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:757050-757255:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:751807-752231:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:750466-750766:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X2
translation: MGSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRGQKDGRRPRSGATLPAESPSNKRLTRRQREGARWDSCTPPLRCSSRGHSINSHSWSGSGPSEREEPEADEDHLSAGSVPSLACSAGRGPGHRATPPGAPPGITGCADQPATETTQATAEPASPAHGGSGAVAPAPGDTGPGAEGGDPGAQNLPADGGERREPRGDCGHEGSRSPSPPAGASGGLDDSEGEVAVTLVDNSVPGVPLCPYEPVRIIVTMSGGPSPGAGAAGGRDPGRDHCRSDLDPTGVTPSAGRPLRIPLIKFQLPDRGDLPQWSGPGDEAHAPFLDPGDEAGPGTPAPRRARGQRQARGLSVDSATDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAAGVPSGLPMGVPMDVSTNIPTGVPNGISTELPQESRLREVSVDLSAPPHVGGGGGGPLEKKEEILEQGKPRDRPPKPGKSDVRSQDWPSAPLPQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEESVGAVHVFIGEHGEIRSCYLKAGTQKEGPPRSQAPSSERVCSVQETLFSSSSSTPSASLDPPSGDPTASALQQQLLLLVARRTQSDRPRPCQDPEDCSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSFLGFVTLSRGFCKDLWALHFCLVMASCQYSLLKSVQPDPASPIHGYNQIITYSRPAYFCILCALILLLDAGSTSRPSPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDTLVFGGSAVTGGLSAVYGVSRSLLTVVGLNVFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLPCPAWAESPSDPLPGKMRESVKEILKSDLIVCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKFVLYPAVALHGLTIDAFAVSVRRVPASRCEVFLLTVAGMKLLRTAFCNPVHQFLVLGFTVLFFRFDCRGASESFLLNLFVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGVDQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVEIGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADRGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARAQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLRPLQPYAKWHHIERDPALFGLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQERLDSDEDSPLVTLCFALCILGRRTLGVAAHNMAISLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAALFEAMGAFESTVVVRHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRLAYLTFKVIKVNRECVRGLWAGQQQELVFLRNRNPERGSIQNHRQVLRNLINSSCDQPLGYPVYVSPLITSFLGSHDQLGHVWGGPAGLGRLGAWLRGRWRRMQKDCHAGQSGSGHIEEGDGSRGGAAGGMSGSGEDGSGSSSRPSSAEHSREAGSPWQTAARDGSRRHAGRKKGSSRPVEAGPGQRPAPPSLSGPGPGGQQSVLQTSSSAQEMARQPSGSQRSRCSSAASLQSRPAAPGTPLAAPARGPPGSSLGSSSTSSTLSLLFGKRSLSSVLVISGLSAADGGNTSDTLSSSSVNIAAGPSARAAAQRQFSDATDGSDPGRPAARAPGTG…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(750596..750766,751807..752231,757050..757255,759190..759464,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794659,794821..794966,796227..796350,796905..797985,800063..800186,801865..802070,808699..808851))
location: region:750596-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796905-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794659:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:759190-759464:-1:exon
so has part: feature:757050-757255:-1:exon
so has part: feature:751807-752231:-1:exon
so has part: feature:750596-750766:-1:exon

XP_038616904.1
type: Protein
SIO_000068: ncbiprotein

position:750596:-1
position: 750596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796905-797985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794659:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:759190-759464:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:757050-757255:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:751807-752231:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:750596-750766:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X1
translation: MGSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRGQKDGRRPRSGATLPAESPSNKRLTRRQREGARWDSCTPPLRCSSRGHSINSHSWSGSGPSEREEPEADEDHLSAGSVPSLACSAGRGPGHRATPPGAPPGITGCADQPATETTQATAEPASPAHGGSGAVAPAPGDTGPGAEGGDPGAQNLPADGGERREPRGDCGHEGSRSPSPPAGASGGLDDSEGEVAVTLVDNSVPGVPLCPYEPVRIIVTMSGGPSPGAGAAGGRDPGRDHCRSDLDPTGVTPSAGRPLRIPLIKFQLPDRGDLPQWSGPGDEAHAPFLDPGDEAGPGTPAPRRARGQRQARGLSVDSATDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAAGVPSGLPMGVPMDVSTNIPTGVPNGISTELPQESRLREVSVDLSAPPHVGEKPSSAHRGGGGGPLEKKEEILEQGKPRDRPPKPGKSDVRSQDWPSAPLPQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEESVGAVHVFIGEHGEIRSCYLKAGTQKEGPPRSQAPSSERVCSVQETLFSSSSSTPSASLDPPSGDPTASALQQQLLLLVARRTQSDRPRPCQDPEDCSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSFLGFVTLSRGFCKDLWALHFCLVMASCQYSLLKSVQPDPASPIHGYNQIITYSRPAYFCILCALILLLDAGSTSRPSPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDTLVFGGSAVTGGLSAVYGVSRSLLTVVGLNVFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLPCPAWAESPSDPLPGKMRESVKEILKSDLIVCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKFVLYPAVALHGLTIDAFAVSVRRVPASRCEVFLLTVAGMKLLRTAFCNPVHQFLVLGFTVLFFRFDCRGASESFLLNLFVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGVDQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVEIGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADRGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARAQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLRPLQPYAKWHHIERDPALFGLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQERLDSDEDSPLVTLCFALCILGRRTLGVAAHNMAISLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAALFEAMGAFESTVVVRHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRLAYLTFKVIKVNRECVRGLWAGQQQELVFLRNRNPERGSIQNHRQVLRNLINSSCDQPLGYPVYVSPLITSFLGSHDQLGHVWGGPAGLGRLGAWLRGRWRRMQKDCHAGQSGSGHIEEGDGSRGGAAGGMSGSGEDGSGSSSRPSSAEHSREAGSPWQTAARDGSRRHAGRKKGSSRPVEAGPGQRPAPPSLSGPGPGGQQSVLQTSSSAQEMARQPSGSQRSRCSSAASLQSRPAAPGTPLAAPARGPPGSSLGSSSTSSTLSLLFGKRSLSSVLVISGLSAADGGNTSDTLSSSSVNIAAGPSARAAAQRQFSDATDGSDPGRP…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(750596..750766,751807..752231,757050..757255,759190..759464,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794659,794821..794966,796227..796350,796881..797985,800063..800186,801865..802070,808699..808851))
location: region:750596-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796881-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794659:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:759190-759464:-1:exon
so has part: feature:757050-757255:-1:exon
so has part: feature:751807-752231:-1:exon
so has part: feature:750596-750766:-1:exon

XP_038616903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796881-797985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794659:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:759190-759464:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:757050-757255:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:751807-752231:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:750596-750766:-1:exon

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PCNX2
product: pecanex 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038760977.1
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(757055..757255,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794677,794821..794966,796227..796350,796881..797985,800063..800186,801865..802070,808699..808851))
location: region:757055-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796881-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794677:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:757055-757255:-1:exon

position:757055:-1
position: 757055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796881-797985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794677:-1:exon

position:794677:-1
position: 794677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:757055-757255:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X3
translation: MGSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRGQKDGRRPRSGATLPAESPSNKRLTRRQREGARWDSCTPPLRCSSRGHSINSHSWSGSGPSEREEPEADEDHLSAGSVPSLACSAGRGPGHRATPPGAPPGITGCADQPATETTQATAEPASPAHGGSGAVAPAPGDTGPGAEGGDPGAQNLPADGGERREPRGDCGHEGSRSPSPPAGASGGLDDSEGEVAVTLVDNSVPGVPLCPYEPVRIIVTMSGGPSPGAGAAGGRDPGRDHCRSDLDPTGVTPSAGRPLRIPLIKFQLPDRGDLPQWSGPGDEAHAPFLDPGDEAGPGTPAPRRARGQRQARGLSVDSATDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAAGVPSGLPMGVPMDVSTNIPTGVPNGISTELPQESRLREVSVDLSAPPHVGEKPSSAHRGGGGGPLEKKEEILEQGKPRDRPPKPGKSDVRSQDWPSAPLPQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEESVGAVHVFIGEHGDSCVPGEIRSCYLKAGTQKEGPPRSQAPSSERVCSVQETLFSSSSSTPSASLDPPSGDPTASALQQQLLLLVARRTQSDRPRPCQDPEDCSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSFLGFVTLSRGFCKDLWALHFCLVMASCQYSLLKSVQPDPASPIHGYNQIITYSRPAYFCILCALILLLDAGSTSRPSPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDTLVFGGSAVTGGLSAVYGVSRSLLTVVGLNVFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLPCPAWAESPSDPLPGKMRESVKEILKSDLIVCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKFVLYPAVALHGLTIDAFAVSVRRVPASRCEVFLLTVAGMKLLRTAFCNPVHQFLVLGFTVLFFRFDCRGASESFLLNLFVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGVDQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVEIGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADRGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARAQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLRPLQPYAKWHHIERDPALFGLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQERLDSDEDSPLVTLCFALCILGRRTLGVAAHNMAISLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAALFEAMGAFESTVVVRHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRLAYLTFKVIKDAEGLPRRAKWQWAYRRGRWQQGWRGRGDVGQRRGWLRQQ
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(757133..757255,763413..763643,766520..766664,766755..766858,768359..768592,770516..770769,774562..774780,775673..775731,777855..777984,778091..778199,778318..778495,778718..778859,779338..779488,779949..780041,780246..780342,781205..781314,784285..784376,786315..786425,787491..787662,789123..789155,790103..790256,792296..792438,793517..793652,794566..794677,794821..794966,796227..796350,796881..797985,800063..800186,801865..802070,808699..808851))
location: region:757133-808851:-1
so has part: feature:808699-808851:-1:exon
so has part: feature:801865-802070:-1:exon
so has part: feature:800063-800186:-1:exon
so has part: feature:796881-797985:-1:exon
so has part: feature:796227-796350:-1:exon
so has part: feature:794821-794966:-1:exon
so has part: feature:794566-794677:-1:exon
so has part: feature:793517-793652:-1:exon
so has part: feature:792296-792438:-1:exon
so has part: feature:790103-790256:-1:exon
so has part: feature:789123-789155:-1:exon
so has part: feature:787491-787662:-1:exon
so has part: feature:786315-786425:-1:exon
so has part: feature:784285-784376:-1:exon
so has part: feature:781205-781314:-1:exon
so has part: feature:780246-780342:-1:exon
so has part: feature:779949-780041:-1:exon
so has part: feature:779338-779488:-1:exon
so has part: feature:778718-778859:-1:exon
so has part: feature:778318-778495:-1:exon
so has part: feature:778091-778199:-1:exon
so has part: feature:777855-777984:-1:exon
so has part: feature:775673-775731:-1:exon
so has part: feature:774562-774780:-1:exon
so has part: feature:770516-770769:-1:exon
so has part: feature:768359-768592:-1:exon
so has part: feature:766755-766858:-1:exon
so has part: feature:766520-766664:-1:exon
so has part: feature:763413-763643:-1:exon
so has part: feature:757133-757255:-1:exon

XP_038616905.1
type: Protein
SIO_000068: ncbiprotein

position:757133:-1
position: 757133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808699-808851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801865-802070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800063-800186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796881-797985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796227-796350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794821-794966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:794566-794677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793517-793652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792296-792438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790103-790256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789123-789155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787491-787662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786315-786425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784285-784376:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:781205-781314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780246-780342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779949-780041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779338-779488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778718-778859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778318-778495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778091-778199:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:777855-777984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775673-775731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:774562-774780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:770516-770769:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:768359-768592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766755-766858:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:766520-766664:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763413-763643:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:757133-757255:-1:exon

KCNK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 849079..864031
location: region:849079-864031:1
so has part: feature:849079-864031:1:exon
subclass of: SO_0000010

119940849
type: Gene
SIO_000068: ncbigene

position:849079:1
position: 849079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864031:1
position: 864031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849079-864031:1:exon

KCNK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: KCNK1
product: potassium two pore domain channel subfamily K member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761196.1
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(849079..849524,860581..860976,863355..864031)
location: region:849079-864031:1
so has part: feature:849079-849524:1:exon
so has part: feature:860581-860976:1:exon
so has part: feature:863355-864031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849079-849524:1:exon

position:849524:1
position: 849524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860581-860976:1:exon

position:860581:1
position: 860581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860976:1
position: 860976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863355-864031:1:exon

position:863355:1
position: 863355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium channel subfamily K member 1
translation: MLQSLAGSSCGRLLERHRSAWRFGLLVVGYGVYLAFGAVVFSSVELPSEDLLRQELRALKRRFLEDHHCLAEPQLEGFLARVLEASSYGVSVLSNASGPWNWDFASALFFASTVLSTTGYGHTVPLSDGGKAFCIVYSVIGIPFTLLFLTAVVQRLVVYVTRRPVLYLHLRWGLSKQLVAGAHAVLLGFVTVSCFFFIPAAIFSALEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKEEEDQVQILDHEQLSFSSVAGRVADAKGEQKPGQDLVTAWPALPPDSSPDP
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(849170..849524,860581..860976,863355..863617)
location: region:849170-863617:1
so has part: feature:849170-849524:1:exon
so has part: feature:860581-860976:1:exon
so has part: feature:863355-863617:1:exon

XP_038617124.1
type: Protein
SIO_000068: ncbiprotein

position:849170:1
position: 849170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863617:1
position: 863617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849170-849524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860581-860976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863355-863617:1:exon

SLC35F3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875995..965737
location: region:875995-965737:1
so has part: feature:875995-965737:1:exon
subclass of: SO_0000010

119940850
type: Gene
SIO_000068: ncbigene

position:875995:1
position: 875995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965737:1
position: 965737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875995-965737:1:exon

SLC35F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC35F3
product: solute carrier family 35 member F3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038761197.1
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(875995..876229,929748..930093,946633..946852,953184..953309,954500..954692,962104..962193,965303..965737)
location: region:875995-965737:1
so has part: feature:875995-876229:1:exon
so has part: feature:929748-930093:1:exon
so has part: feature:946633-946852:1:exon
so has part: feature:953184-953309:1:exon
so has part: feature:954500-954692:1:exon
so has part: feature:962104-962193:1:exon
so has part: feature:965303-965737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875995-876229:1:exon

position:876229:1
position: 876229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929748-930093:1:exon

position:929748:1
position: 929748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930093:1
position: 930093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946633-946852:1:exon

position:946633:1
position: 946633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946852:1
position: 946852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:953184-953309:1:exon

position:953184:1
position: 953184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953309:1
position: 953309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:954500-954692:1:exon

position:954500:1
position: 954500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954692:1
position: 954692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962193:1:exon

position:962104:1
position: 962104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962193:1
position: 962193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:965303-965737:1:exon

position:965303:1
position: 965303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC35F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3 isoform X1
translation: MRRGPDDVSPRRLSDISPQLRQLKYLVVDEAIKEDWKWSRSVEDLTGAGSSSGLTSIEERILRITGYYGYQPWAAGYKRDERPPAPPAPPAEAQSGTASTTSGPGLGRALRWRSCGGDGGGGPRAALWGLAVALGVCATWAGSTQLAKLTFRTFDAPFTLTWFATAWNLLFFPVYYAGHVCTAAEKQAPRQRYRECCRFFGESGLTLKAFCIKIAPFGVLCTLTNYLYLYALKKINTTDVSALFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASMAALYKVLFKLLLGSANFGEAALFLSALGVFNLLLVSCVPVVLYFTRVEHWDSLGDVPWRNLCGFSFLLLTFNIVLNFGIAVTYPTLISLGIVLSVPVNAVVDGYVSEISFNGVRVIAIIIIGLGFLLLLLPEDWDSWLLRLVARLKARSKEEAPEANGEVGSGLPGRARRGRPSFGR
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(875995..876229,929748..930093,946633..946852,953184..953309,954500..954692,962104..962193,965303..965538)
location: region:875995-965538:1
so has part: feature:875995-876229:1:exon
so has part: feature:929748-930093:1:exon
so has part: feature:946633-946852:1:exon
so has part: feature:953184-953309:1:exon
so has part: feature:954500-954692:1:exon
so has part: feature:962104-962193:1:exon
so has part: feature:965303-965538:1:exon

XP_038617125.1
type: Protein
SIO_000068: ncbiprotein

position:965538:1
position: 965538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875995-876229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929748-930093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946633-946852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953184-953309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954500-954692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965303-965538:1:exon

SLC35F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC35F3
product: solute carrier family 35 member F3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761198.1
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(919378..919453,929748..930093,946633..946852,953184..953309,954500..954692,962104..962193,965303..965737)
location: region:919378-965737:1
so has part: feature:919378-919453:1:exon
so has part: feature:929748-930093:1:exon
so has part: feature:946633-946852:1:exon
so has part: feature:953184-953309:1:exon
so has part: feature:954500-954692:1:exon
so has part: feature:962104-962193:1:exon
so has part: feature:965303-965737:1:exon

position:919378:1
position: 919378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919378-919453:1:exon

position:919453:1
position: 919453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929748-930093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946633-946852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953184-953309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954500-954692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965303-965737:1:exon

SLC35F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3 isoform X2
translation: MKKHSARVAPLSACNSPVLTLTKVEGDERPPAPPAPPAEAQSGTASTTSGPGLGRALRWRSCGGDGGGGPRAALWGLAVALGVCATWAGSTQLAKLTFRTFDAPFTLTWFATAWNLLFFPVYYAGHVCTAAEKQAPRQRYRECCRFFGESGLTLKAFCIKIAPFGVLCTLTNYLYLYALKKINTTDVSALFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASMAALYKVLFKLLLGSANFGEAALFLSALGVFNLLLVSCVPVVLYFTRVEHWDSLGDVPWRNLCGFSFLLLTFNIVLNFGIAVTYPTLISLGIVLSVPVNAVVDGYVSEISFNGVRVIAIIIIGLGFLLLLLPEDWDSWLLRLVARLKARSKEEAPEANGEVGSGLPGRARRGRPSFGR
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(919378..919453,929748..930093,946633..946852,953184..953309,954500..954692,962104..962193,965303..965538)
location: region:919378-965538:1
so has part: feature:919378-919453:1:exon
so has part: feature:929748-930093:1:exon
so has part: feature:946633-946852:1:exon
so has part: feature:953184-953309:1:exon
so has part: feature:954500-954692:1:exon
so has part: feature:962104-962193:1:exon
so has part: feature:965303-965538:1:exon

XP_038617126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919378-919453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929748-930093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946633-946852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953184-953309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954500-954692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965303-965538:1:exon

LOC119940962
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119940962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 969918..981957
location: region:969918-981957:1
so has part: feature:969918-981957:1:exon
subclass of: SO_0000010

119940962
type: Gene
SIO_000068: ncbigene

position:969918:1
position: 969918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981957:1
position: 981957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969918-981957:1:exon

LOC119940962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119940962
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761377.1
SIO_010081: LOC119940962
subclass of: SO_0000673
so part of: LOC119940962
location: join(969918..970111,978405..978556,979619..979736)
location: region:969918-979736:1
so has part: feature:969918-970111:1:exon
so has part: feature:978405-978556:1:exon
so has part: feature:979619-979736:1:exon

position:979736:1
position: 979736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969918-970111:1:exon

position:970111:1
position: 970111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978405-978556:1:exon

position:978405:1
position: 978405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978556:1
position: 978556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979619-979736:1:exon

position:979619:1
position: 979619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119940962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119940962
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761376.1
SIO_010081: LOC119940962
subclass of: SO_0000673
so part of: LOC119940962
location: join(969919..970111,978405..978556,981693..981957)
location: region:969919-981957:1
so has part: feature:969919-970111:1:exon
so has part: feature:978405-978556:1:exon
so has part: feature:981693-981957:1:exon

position:969919:1
position: 969919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969919-970111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978405-978556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981693-981957:1:exon

position:981693:1
position: 981693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119940962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119940962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog
translation: MAAAAAPSKKERLACWEARDRYWRCLDHNADDALKCRHARGPFEDACPQQWIKYFDKRRDYLKFKEKFEAGQFQPPEPKAESS
SIO_010081: LOC119940962
subclass of: SO_0000673
so part of: LOC119940962
location: join(969959..970111,978405..978503)
location: region:969959-978503:1
so has part: feature:969959-970111:1:exon
so has part: feature:978405-978503:1:exon

XP_038617304.1
type: Protein
SIO_000068: ncbiprotein

position:969959:1
position: 969959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978503:1
position: 978503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969959-970111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978405-978503:1:exon

LOC119940962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119940962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog
translation: MAAAAAPSKKERLACWEARDRYWRCLDHNADDALKCRHARGPFEDACPQQWIKYFDKRRDYLKFKEKFEAGQFQPPEPKAESS
SIO_010081: LOC119940962
subclass of: SO_0000673
so part of: LOC119940962
location: join(969959..970111,978405..978503)
location: region:969959-978503:1
so has part: feature:969959-970111:1:exon
so has part: feature:978405-978503:1:exon

XP_038617305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:969959-970111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978405-978503:1:exon

TARBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(979908..1035549)
location: region:979908-1035549:-1
so has part: feature:979908-1035549:-1:exon
subclass of: SO_0000010

119940978
type: Gene
SIO_000068: ncbigene

position:979908:-1
position: 979908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035549:-1
position: 1035549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979908-1035549:-1:exon

TARBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761398.1
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(979908..980107,980316..980452,981201..981325,981411..981605,981774..981948,983804..983885,985856..986052,992885..992971,994069..994218,994348..994458,995291..995414,1001067..1001138,1001223..1001410,1002891..1003079,1003167..1003404,1005034..1005227,1007108..1007260,1012727..1012824,1016094..1016269,1017712..1017808,1018500..1018635,1021257..1021346,1026088..1026184,1026292..1026427,1026670..1026770,1028807..1028859,1028970..1029118,1029629..1029698,1032042..1032139,1033968..1035549))
location: region:979908-1035549:-1
so has part: feature:1033968-1035549:-1:exon
so has part: feature:1032042-1032139:-1:exon
so has part: feature:1029629-1029698:-1:exon
so has part: feature:1028970-1029118:-1:exon
so has part: feature:1028807-1028859:-1:exon
so has part: feature:1026670-1026770:-1:exon
so has part: feature:1026292-1026427:-1:exon
so has part: feature:1026088-1026184:-1:exon
so has part: feature:1021257-1021346:-1:exon
so has part: feature:1018500-1018635:-1:exon
so has part: feature:1017712-1017808:-1:exon
so has part: feature:1016094-1016269:-1:exon
so has part: feature:1012727-1012824:-1:exon
so has part: feature:1007108-1007260:-1:exon
so has part: feature:1005034-1005227:-1:exon
so has part: feature:1003167-1003404:-1:exon
so has part: feature:1002891-1003079:-1:exon
so has part: feature:1001223-1001410:-1:exon
so has part: feature:1001067-1001138:-1:exon
so has part: feature:995291-995414:-1:exon
so has part: feature:994348-994458:-1:exon
so has part: feature:994069-994218:-1:exon
so has part: feature:992885-992971:-1:exon
so has part: feature:985856-986052:-1:exon
so has part: feature:983804-983885:-1:exon
so has part: feature:981774-981948:-1:exon
so has part: feature:981411-981605:-1:exon
so has part: feature:981201-981325:-1:exon
so has part: feature:980316-980452:-1:exon
so has part: feature:979908-980107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033968-1035549:-1:exon

position:1033968:-1
position: 1033968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1032042-1032139:-1:exon

position:1032042:-1
position: 1032042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032139:-1
position: 1032139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029629-1029698:-1:exon

position:1029629:-1
position: 1029629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029698:-1
position: 1029698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1028970-1029118:-1:exon

position:1028970:-1
position: 1028970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029118:-1
position: 1029118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028807-1028859:-1:exon

position:1028807:-1
position: 1028807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028859:-1
position: 1028859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1026670-1026770:-1:exon

position:1026670:-1
position: 1026670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026770:-1
position: 1026770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1026292-1026427:-1:exon

position:1026292:-1
position: 1026292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026427:-1
position: 1026427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1026088-1026184:-1:exon

position:1026088:-1
position: 1026088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026184:-1
position: 1026184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1021257-1021346:-1:exon

position:1021257:-1
position: 1021257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021346:-1
position: 1021346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1018500-1018635:-1:exon

position:1018500:-1
position: 1018500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018635:-1
position: 1018635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1017712-1017808:-1:exon

position:1017712:-1
position: 1017712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017808:-1
position: 1017808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1016094-1016269:-1:exon

position:1016094:-1
position: 1016094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016269:-1
position: 1016269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1012727-1012824:-1:exon

position:1012727:-1
position: 1012727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012824:-1
position: 1012824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1007108-1007260:-1:exon

position:1007108:-1
position: 1007108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007260:-1
position: 1007260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1005034-1005227:-1:exon

position:1005034:-1
position: 1005034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005227:-1
position: 1005227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1003167-1003404:-1:exon

position:1003167:-1
position: 1003167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003404:-1
position: 1003404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1002891-1003079:-1:exon

position:1002891:-1
position: 1002891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003079:-1
position: 1003079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1001223-1001410:-1:exon

position:1001223:-1
position: 1001223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001410:-1
position: 1001410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1001067-1001138:-1:exon

position:1001067:-1
position: 1001067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001138:-1
position: 1001138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:995291-995414:-1:exon

position:995291:-1
position: 995291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995414:-1
position: 995414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:994348-994458:-1:exon

position:994348:-1
position: 994348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994458:-1
position: 994458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:994069-994218:-1:exon

position:994069:-1
position: 994069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994218:-1
position: 994218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:992885-992971:-1:exon

position:992885:-1
position: 992885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992971:-1
position: 992971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:985856-986052:-1:exon

position:985856:-1
position: 985856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986052:-1
position: 986052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:983804-983885:-1:exon

position:983804:-1
position: 983804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983885:-1
position: 983885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:981774-981948:-1:exon

position:981774:-1
position: 981774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981948:-1
position: 981948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:981411-981605:-1:exon

position:981411:-1
position: 981411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981605:-1
position: 981605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:981201-981325:-1:exon

position:981201:-1
position: 981201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981325:-1
position: 981325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:980316-980452:-1:exon

position:980316:-1
position: 980316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980452:-1
position: 980452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:979908-980107:-1:exon

position:980107:-1
position: 980107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable methyltransferase TARBP1
translation: MWRRRAPIGQEAEGRTPRVGGGAKRRFGPPIGRGAGPGGGAGLPLAGWRRRAWGGATYDVSSCAARAAEGMDGRVDHRAPEDRRAPEDRTTDDHRAQEDRAPDSHRAQEDRAPENWVLGDRAPDNHRAQEDRTPENRVLGDRAPKGRTPDNHRAQEDRVPDNHRAQEDRVPDNHRAQEDRVPDNHRVQEDRTPDNHRVQEGQALKDRGLEARAPDHRVLGDWAPKDRVLEAWAPKDQLLGDRAPKDRALDNWIPDDRVLEDWASNDWTPKDRVLEAWAPKDRVLEDRAQEDWAPGNWTPDDRVLEDWASNDWTPKDRVLEDWAPKDRVPADRAQEDRVLGDRAPKDWAPGNWTPDDRVLEDWAQEDRVLGDRAPKDWAPDNRAPDDRVLEDWAQEGRVLGDRAPKDRAPDDLVRENMAQEDEAGAAPRALSGVSTAAWSGLLPGDEPPTAPAQTLPVLSALADGPLPPAPPLAGPDPRPRRPFWLTVQAGLTLAHDGRTRHRARALLHRAVRLSAQAAHPGPPGPPTEPSLFWWSEQKKELLLKFWENFVLILETLEGNQIHVIKPVLPKLNSLFEYALAEGRTRWLIHPSWHLCVYQRLLQSENKTLAGEGVTHFLELWGGEGLPSAPDFSEFIIGPLMDALSESSLYSRSPGQPSGSCPPVGMKLQGFLATYVSHLPEEKAKRSFLLRFIEKMGTRHWCAVPVVFFSKALAHIPRTRVLGAEGLRALREVLRRTMVTHQVLLRGAAQAYLLQAALRLVDVEAVALSEAAGFLACLRPEESLGRGTALWTEVCDWLRVNEASFGKSRNGAEGREESSLDAYVRSLVRDYVKSPSDEGGKCFVPDCFEAKLVATMVLLAADAEGMKSGGSGKEDRGPDGLRTVLQPLVDVLSKLGTNPYIPALRADRCLQLLRQLLRTASSRGSGSRHDEVWTVLQSSFVAASESISDFLLRRLTVGELSTLPDLDRCRLYLGVLGELATLHPGGAAAPGSWLPPLKSAAVRHLRDKPDGGGAPALGEQVQKAVSMACLAAVCEAAERPPRRSLDALDADGTLRTFVASAQFDRRPEKPRWPRERSSSLEEPSPSQGWGKCVAQYVHDQWVCRRFALSRPWRGQAAAPGAGTPPEAPLRAALEALAVLPPDRVLPVFGSMRILVPELLSSHEALCVRSLDAAWKIVASSSSAQLVFWPNLEAFVGFAFDSRVLAVAARRKGRAHARLKEIASEMTGMSSTRTGVFNVLISHCCRSWLASAGSPEDPLSYARDYVGLVAEACVFGPVFRRDQRLVQDVQAFIGSLGSECAANVVTESAHRDDRYVRVCAVKFLCLLDGARRPASKLFVQELAAGLLEKEAVVSGSRSHYYANSLQHRIQNRVWQVLLVLFPKLDEDFLSGVVDKVFQAAAVSSQASVKYAVQWMIILILHRCPQFFPKFWDCFRSGEENFKTSICTYLSVLFHLDVIIQDEAEMRAQLKKGLVVALQWCFSHNFRVRLYALVTLKKIWGLCKTWCPEDCQALMPAIESSLQQVENTHGAGNAKKNWQRIQEHFFFAVFHPLRDHNLETIFYILPRLSELAEDEWISLSQFTGFPAIPGESAGPGWGRARGELRDLQPGPWVQPDTGLNPAELALQLEGTDVQKKVIPWKNDRSAPLDLDRLFRDRAARLGKSLSGLIVVASLVAKPANLGGLCRTCEIFGVATLVLGSLRCVSDKQFQHLSVSAEQWLPLLEVKPAQLGDYLQQRKAAGYTVIGVEQTAKSVDLTEYRFPEKSLLLLGNEREGIPANLLRQLDVCVEIPQQGIVRSLNVHVSGALLVWEYTRQRLTPRAARRAHEGQGS
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(979921..980107,980316..980452,981201..981325,981411..981605,981774..981948,983804..983885,985856..986052,992885..992971,994069..994218,994348..994458,995291..995414,1001067..1001138,1001223..1001410,1002891..1003079,1003167..1003404,1005034..1005227,1007108..1007260,1012727..1012824,1016094..1016269,1017712..1017808,1018500..1018635,1021257..1021346,1026088..1026184,1026292..1026427,1026670..1026770,1028807..1028859,1028970..1029118,1029629..1029698,1032042..1032139,1033968..1035549))
location: region:979921-1035549:-1
so has part: feature:1033968-1035549:-1:exon
so has part: feature:1032042-1032139:-1:exon
so has part: feature:1029629-1029698:-1:exon
so has part: feature:1028970-1029118:-1:exon
so has part: feature:1028807-1028859:-1:exon
so has part: feature:1026670-1026770:-1:exon
so has part: feature:1026292-1026427:-1:exon
so has part: feature:1026088-1026184:-1:exon
so has part: feature:1021257-1021346:-1:exon
so has part: feature:1018500-1018635:-1:exon
so has part: feature:1017712-1017808:-1:exon
so has part: feature:1016094-1016269:-1:exon
so has part: feature:1012727-1012824:-1:exon
so has part: feature:1007108-1007260:-1:exon
so has part: feature:1005034-1005227:-1:exon
so has part: feature:1003167-1003404:-1:exon
so has part: feature:1002891-1003079:-1:exon
so has part: feature:1001223-1001410:-1:exon
so has part: feature:1001067-1001138:-1:exon
so has part: feature:995291-995414:-1:exon
so has part: feature:994348-994458:-1:exon
so has part: feature:994069-994218:-1:exon
so has part: feature:992885-992971:-1:exon
so has part: feature:985856-986052:-1:exon
so has part: feature:983804-983885:-1:exon
so has part: feature:981774-981948:-1:exon
so has part: feature:981411-981605:-1:exon
so has part: feature:981201-981325:-1:exon
so has part: feature:980316-980452:-1:exon
so has part: feature:979921-980107:-1:exon

XP_038617326.1
type: Protein
SIO_000068: ncbiprotein

position:979921:-1
position: 979921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033968-1035549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032042-1032139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029629-1029698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028970-1029118:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028807-1028859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026670-1026770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026292-1026427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1026088-1026184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021257-1021346:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1018500-1018635:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1017712-1017808:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1016094-1016269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1012727-1012824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1007108-1007260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1005034-1005227:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1003167-1003404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1002891-1003079:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1001223-1001410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1001067-1001138:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:995291-995414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:994348-994458:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:994069-994218:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:992885-992971:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:985856-986052:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:983804-983885:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:981774-981948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:981411-981605:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:981201-981325:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:980316-980452:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:979921-980107:-1:exon

IRF2BP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IRF2BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1053867..1067245)
location: region:1053867-1067245:-1
so has part: feature:1053867-1067245:-1:exon
subclass of: SO_0000010

119940833
type: Gene
SIO_000068: ncbigene

position:1053867:-1
position: 1053867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067245:-1
position: 1067245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053867-1067245:-1:exon

IRF2BP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IRF2BP2
product: interferon regulatory factor 2 binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038761181.1
SIO_010081: IRF2BP2
subclass of: SO_0000673
so part of: IRF2BP2
location: complement(join(1053867..1054810,1066458..1067245))
location: region:1053867-1067245:-1
so has part: feature:1066458-1067245:-1:exon
so has part: feature:1053867-1054810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066458-1067245:-1:exon

position:1066458:-1
position: 1066458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1053867-1054810:-1:exon

position:1054810:-1
position: 1054810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRF2BP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IRF2BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 2-binding protein 2
translation: MSSALSLSLSAGVSPPSPSPLSPLSSPSPSRRQSCYLCDLPRMPWAVVWDFSEPVCRGCVNYEGADRVQLVIDAARQLKRGHGGGGGGHPGAGGRTPPLPPHDRHPRPGALPLPNGFPPKAEEPPDPPRRPLGPALTPLLNGAAAAGQPSGMGRANEPAAHREKAPRRSSLDGLGGVEPDGGAACGGGGKARSEQDWPGKARTVRDTLLALHHHAHPGPFEPKPKKEPGLGPPRALLAFEVNGAALAPKPVPRPARKRKASPEPEGEAGPPKLNPAAHRTPPPAAAGPDGPSPMAALILAADHAGGPKDGGPRRPGEPAHPAAAAAAAALCCTLCRERLEDTHFVQCPSVPSHKFCFPCSRQSIKQQGAGGEVYCPSGDKCPLVGSSVPWAFMQGEIATILAGDVKVKKERDP
SIO_010081: IRF2BP2
subclass of: SO_0000673
so part of: IRF2BP2
location: complement(join(1054320..1054810,1066458..1067208))
location: region:1054320-1067208:-1
so has part: feature:1066458-1067208:-1:exon
so has part: feature:1054320-1054810:-1:exon

XP_038617109.1
type: Protein
SIO_000068: ncbiprotein

position:1054320:-1
position: 1054320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067208:-1
position: 1067208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066458-1067208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054320-1054810:-1:exon

TOMM20
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TOMM20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1131721..1146034)
location: region:1131721-1146034:-1
so has part: feature:1131721-1146034:-1:exon
subclass of: SO_0000010

119940880
type: Gene
SIO_000068: ncbigene

position:1131721:-1
position: 1131721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146034:-1
position: 1146034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131721-1146034:-1:exon

TOMM20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TOMM20
product: translocase of outer mitochondrial membrane 20
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038761250.1
SIO_010081: TOMM20
subclass of: SO_0000673
so part of: TOMM20
location: complement(join(1131721..1132136,1133948..1134091,1135304..1135385,1136727..1136773,1145886..1146034))
location: region:1131721-1146034:-1
so has part: feature:1145886-1146034:-1:exon
so has part: feature:1136727-1136773:-1:exon
so has part: feature:1135304-1135385:-1:exon
so has part: feature:1133948-1134091:-1:exon
so has part: feature:1131721-1132136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145886-1146034:-1:exon

position:1145886:-1
position: 1145886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136727-1136773:-1:exon

position:1136727:-1
position: 1136727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136773:-1
position: 1136773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135304-1135385:-1:exon

position:1135304:-1
position: 1135304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135385:-1
position: 1135385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1133948-1134091:-1:exon

position:1133948:-1
position: 1133948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134091:-1
position: 1134091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1131721-1132136:-1:exon

position:1132136:-1
position: 1132136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TOMM20
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM20 homolog
translation: MVGRSGALAAGLCGALFIGYCIYFDRKRRSQPDFKHRLRQRRKKQKLARERAGLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQRIVSAQSLAEDDVE
SIO_010081: TOMM20
subclass of: SO_0000673
so part of: TOMM20
location: complement(join(1132092..1132136,1133948..1134091,1135304..1135385,1136727..1136773,1145886..1146006))
location: region:1132092-1146006:-1
so has part: feature:1145886-1146006:-1:exon
so has part: feature:1136727-1136773:-1:exon
so has part: feature:1135304-1135385:-1:exon
so has part: feature:1133948-1134091:-1:exon
so has part: feature:1132092-1132136:-1:exon

XP_038617178.1
type: Protein
SIO_000068: ncbiprotein

position:1132092:-1
position: 1132092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146006:-1
position: 1146006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145886-1146006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136727-1136773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135304-1135385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133948-1134091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132092-1132136:-1:exon

RBM34
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RBM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149711..1172411)
location: region:1149711-1172411:-1
so has part: feature:1149711-1172411:-1:exon
subclass of: SO_0000010

119940982
type: Gene
SIO_000068: ncbigene

position:1149711:-1
position: 1149711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172411:-1
position: 1172411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149711-1172411:-1:exon

RBM34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RBM34
product: RNA binding motif protein 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038761403.1
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1149711..1150035,1151987..1152105,1154454..1154493,1155964..1156027,1157165..1157248,1159016..1159059,1162997..1163056,1163458..1163656,1165690..1165832,1166954..1167158,1172377..1172411))
location: region:1149711-1172411:-1
so has part: feature:1172377-1172411:-1:exon
so has part: feature:1166954-1167158:-1:exon
so has part: feature:1165690-1165832:-1:exon
so has part: feature:1163458-1163656:-1:exon
so has part: feature:1162997-1163056:-1:exon
so has part: feature:1159016-1159059:-1:exon
so has part: feature:1157165-1157248:-1:exon
so has part: feature:1155964-1156027:-1:exon
so has part: feature:1154454-1154493:-1:exon
so has part: feature:1151987-1152105:-1:exon
so has part: feature:1149711-1150035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172377-1172411:-1:exon

position:1172377:-1
position: 1172377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1166954-1167158:-1:exon

position:1166954:-1
position: 1166954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167158:-1
position: 1167158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1165690-1165832:-1:exon

position:1165690:-1
position: 1165690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165832:-1
position: 1165832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1163458-1163656:-1:exon

position:1163458:-1
position: 1163458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163656:-1
position: 1163656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1162997-1163056:-1:exon

position:1162997:-1
position: 1162997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163056:-1
position: 1163056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1159016-1159059:-1:exon

position:1159016:-1
position: 1159016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159059:-1
position: 1159059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1157165-1157248:-1:exon

position:1157165:-1
position: 1157165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157248:-1
position: 1157248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1155964-1156027:-1:exon

position:1155964:-1
position: 1155964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156027:-1
position: 1156027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1154454-1154493:-1:exon

position:1154454:-1
position: 1154454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154493:-1
position: 1154493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1151987-1152105:-1:exon

position:1151987:-1
position: 1151987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152105:-1
position: 1152105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1149711-1150035:-1:exon

position:1150035:-1
position: 1150035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RBM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 34
translation: MFEEKGPSWRSGEAERKKRRQRRPGAASSTAPGPSGEYRIGQVLGSLSGARRARGREGALASLFHLPLAPAQPLYLPAPTEATRKRKEEEEAETPTASAGEPGPLRKKAKKKKKKKNPSLADQRIADRESALARADDEEEERETQATEKRKGGSSRAGGEAGDAGGKASDSEVERLKNDRTVFVGNLPVSCNKKKLKSIFKEYGPIESVRFRSVIPAEGIATKKLAAIKRKVHPEQKNINAYVVFKEESAATKALKRNGTQISDGFRIRVDLASETSSRDKRSVFVGNLAYKIEEASVQEHFSDCGQIIAVRIVRDGVTGVGKGFGYVLFENTDAVQLALKLNNSELMGRKLRVMRSVNKEKIRASPNPNGKDLAAPEQRFSPLKKTGHLEHAFSGEKAVPGKKRRKKKKGQKTGNRKQVEKPK
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1149754..1150035,1151987..1152105,1154454..1154493,1155964..1156027,1157165..1157248,1159016..1159059,1162997..1163056,1163458..1163656,1165690..1165832,1166954..1167158,1172377..1172411))
location: region:1149754-1172411:-1
so has part: feature:1172377-1172411:-1:exon
so has part: feature:1166954-1167158:-1:exon
so has part: feature:1165690-1165832:-1:exon
so has part: feature:1163458-1163656:-1:exon
so has part: feature:1162997-1163056:-1:exon
so has part: feature:1159016-1159059:-1:exon
so has part: feature:1157165-1157248:-1:exon
so has part: feature:1155964-1156027:-1:exon
so has part: feature:1154454-1154493:-1:exon
so has part: feature:1151987-1152105:-1:exon
so has part: feature:1149754-1150035:-1:exon

XP_038617331.1
type: Protein
SIO_000068: ncbiprotein

position:1149754:-1
position: 1149754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172377-1172411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166954-1167158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1165690-1165832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1163458-1163656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162997-1163056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159016-1159059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157165-1157248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1155964-1156027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154454-1154493:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151987-1152105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149754-1150035:-1:exon

ARID4B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1173621..1283001)
location: region:1173621-1283001:-1
so has part: feature:1173621-1283001:-1:exon
subclass of: SO_0000010

119940766
type: Gene
SIO_000068: ncbigene

position:1173621:-1
position: 1173621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283001:-1
position: 1283001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173621-1283001:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761071.1
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1173621..1173918,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278929,1282901..1283001))
location: region:1173621-1283001:-1
so has part: feature:1282901-1283001:-1:exon
so has part: feature:1278875-1278929:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1173621-1173918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282901-1283001:-1:exon

position:1282901:-1
position: 1282901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278875-1278929:-1:exon

position:1278875:-1
position: 1278875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278929:-1
position: 1278929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1234925-1235035:-1:exon

position:1234925:-1
position: 1234925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235035:-1
position: 1235035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233567-1233632:-1:exon

position:1233567:-1
position: 1233567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233632:-1
position: 1233632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1229186-1229276:-1:exon

position:1229186:-1
position: 1229186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229276:-1
position: 1229276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226834-1226913:-1:exon

position:1226834:-1
position: 1226834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226913:-1
position: 1226913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1224104-1224195:-1:exon

position:1224104:-1
position: 1224104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224195:-1
position: 1224195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1221300-1221438:-1:exon

position:1221300:-1
position: 1221300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221438:-1
position: 1221438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1218395-1218474:-1:exon

position:1218395:-1
position: 1218395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218474:-1
position: 1218474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217681-1217757:-1:exon

position:1217681:-1
position: 1217681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217757:-1
position: 1217757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1216540-1216694:-1:exon

position:1216540:-1
position: 1216540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216694:-1
position: 1216694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1213200-1213272:-1:exon

position:1213200:-1
position: 1213200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213272:-1
position: 1213272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1212029-1212123:-1:exon

position:1212029:-1
position: 1212029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212123:-1
position: 1212123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1208931-1209028:-1:exon

position:1208931:-1
position: 1208931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209028:-1
position: 1209028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1206049-1206292:-1:exon

position:1206049:-1
position: 1206049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206292:-1
position: 1206292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1203308-1203483:-1:exon

position:1203308:-1
position: 1203308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203483:-1
position: 1203483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1192096-1192180:-1:exon

position:1192096:-1
position: 1192096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192180:-1
position: 1192180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1187162-1187360:-1:exon

position:1187162:-1
position: 1187162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187360:-1
position: 1187360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1184094-1185296:-1:exon

position:1184094:-1
position: 1184094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185296:-1
position: 1185296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1181237-1181350:-1:exon

position:1181237:-1
position: 1181237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181350:-1
position: 1181350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1177781-1177996:-1:exon

position:1177781:-1
position: 1177781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177996:-1
position: 1177996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1175961-1176107:-1:exon

position:1175961:-1
position: 1175961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176107:-1
position: 1176107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1173621-1173918:-1:exon

position:1173918:-1
position: 1173918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761067.1
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1173621..1173918,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278929,1282901..1283001))
location: region:1173621-1283001:-1
so has part: feature:1282901-1283001:-1:exon
so has part: feature:1278875-1278929:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1173621-1173918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282901-1283001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278875-1278929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198437-1198715:-1:exon

position:1198437:-1
position: 1198437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198715:-1
position: 1198715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1173621-1173918:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X4
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGAAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVQEISSDAAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSNRPCKECENAKEGKVHEEPGPEVKAVKAEEGATEPQETEKPAGEETERKENIKPPLGNRKNVPEPGATQADREKESGREKNEEDERLEEKAEEISKVDEALGAKGEAEEEKGKSGYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFPTSTPPETGSKADGAEGRSAEPAHVKAIEITSILNGLQASESSAEESERDAEPAPQRAESPGKKEPPGPDPSEPRSKEEQGPSSAPAESQTLPEPGGRREPEEFSEDSDSEEEDGASKKRKDAKREAGDKAAKPPAKRGKRRFGGGEDGAKAGSPSRKDDRAKGKEAPGLEHSSNSSSEDDEDEKAKVKGTPAKKYNGLEEKRKSLRATVFYSGFSEVAEKRLKLLTSSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPWDGGAAGEEQPAAATAAAAGEEERRPAGPRPGPDPDRPGPPGAEGKPAEEKAVETGDKKADFPSSGSNSVLNTPPTTPESPASVTATETGRQPAAGPASEALAPGREEVRGIKSETDSTVEVDGVAGELHDLRSEGNVSPTGFDAGVGSGSGTRPEPEHPEKVCTGQKRAKEAQGGGSSAKKPKRNHKTAVVNNKKKVKASNSSDSEELSAGESAPKAPPAKAAAAGMKAHSAKSPARIQSPGKCGKNGEKDSDLKEHGGRLPKIYKWSFQMADLEKLSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERERKAFVRFTVLRSRWKWFRSVRIRDCEKRSVGGATKTVAERSNHGIDREERSVGGATWKEELLGELESICRALRAAENSVI
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1173677..1173918,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278880))
location: region:1173677-1278880:-1
so has part: feature:1278875-1278880:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1173677-1173918:-1:exon

XP_038616999.1
type: Protein
SIO_000068: ncbiprotein

position:1173677:-1
position: 1173677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278880:-1
position: 1278880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278875-1278880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1173677-1173918:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X1
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGAAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVQEISSDAAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSNRPCKECENAKEGKVHEEPGPEVKAVKAEEGATEPQETEKPAGEETERKENIKPPLGNRKNVPEPGATQADREKESGREKNEEDERLEEKAEEISKVDEALGAKGEAEEEKGKSGDEANKEEEEDEEEAEEEEEEEEEVEEEEEEEEEEDVDDPNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKHSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFPTSTPPETGSKADGAEGRSAEPAHVKAIEITSILNGLQASESSAEESERDAEPAPQRAESPGKKEPPGPDPSEPRSKEEQGPSSAPAESQTLPEPGGRREPEEFSEDSDSEEEDGASKKRKDAKREAGDKAAKPPAKRGKRRFGGGEDGAKAGSPSRKDDRAKGKEAPGLEHSSNSSSEDDEDEKAKVKGTPAKKYNGLEEKRKSLRATVFYSGFSEVAEKRLKLLTSSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPWDGGAAGEEQPAAATAAAAGEEERRPAGPRPGPDPDRPGPPGAEGKPAEEKAVETGDKKADFPSSGSNSVLNTPPTTPESPASVTATETGRQPAAGPASEALAPGREEVRGIKSETDSTVEVDGVAGELHDLRSEGNVSPTGFDAGVGSGSGTRPEPEHPEKVCTGQKRAKEAQGGGSSAKKPKRNHKTAVVNNKKKVKASNSSDSEELSAGESAPKAPPAKAAAAGMKAHSAKSPARIQSPGKCGKNGEKDSDLKEHGGRLPKIYKWSFQMADLEKLSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERERKAFVRFTVLRSRWKWFRSVRIRDCEKRSVGGATKTVAERSNHGIDREERSVGGATWKEELLGELESICRALRAAENSVI
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1173677..1173918,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278880))
location: region:1173677-1278880:-1
so has part: feature:1278875-1278880:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1173677-1173918:-1:exon

XP_038616995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1278875-1278880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1198437-1198715:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1173677-1173918:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761072.1
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175105..1175346,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278929,1282901..1283001))
location: region:1175105-1283001:-1
so has part: feature:1282901-1283001:-1:exon
so has part: feature:1278875-1278929:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175105-1175346:-1:exon

position:1175105:-1
position: 1175105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282901-1283001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278875-1278929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175105-1175346:-1:exon

position:1175346:-1
position: 1175346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761068.1
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175105..1175346,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278929,1282901..1283001))
location: region:1175105-1283001:-1
so has part: feature:1282901-1283001:-1:exon
so has part: feature:1278875-1278929:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175105-1175346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282901-1283001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278875-1278929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198437-1198715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1175105-1175346:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038761070.1
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175147..1175264,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278929,1282901..1283001))
location: region:1175147-1283001:-1
so has part: feature:1282901-1283001:-1:exon
so has part: feature:1278875-1278929:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175147-1175264:-1:exon

position:1175147:-1
position: 1175147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282901-1283001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278875-1278929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198437-1198715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1175147-1175264:-1:exon

position:1175264:-1
position: 1175264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X5
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGAAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVQEISSDAAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSNRPCKECENAKEGKVHEEPGPEVKAVKAEEGATEPQETEKPAGEETERKENIKPPLGNRKNVPEPGATQADREKESGREKNEEDERLEEKAEEISKVDEALGAKGEAEEEKGKSGYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFPTSTPPETGSKADGAEGRSAEPAHVKAIEITSILNGLQASESSAEESERDAEPAPQRAESPGKKEPPGPDPSEPRSKEEQGPSSAPAESQTLPEPGGRREPEEFSEDSDSEEEDGASKKRKDAKREAGDKAAKPPAKRGKRRFGGGEDGAKAGSPSRKDDRAKGKEAPGLEHSSNSSSEDDEDEKAKVKGTPAKKYNGLEEKRKSLRATVFYSGFSEVAEKRLKLLTSSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPWDGGAAGEEQPAAATAAAAGEEERRPAGPRPGPDPDRPGPPGAEGKPAEEKAVETGDKKADFPSSGSNSVLNTPPTTPESPASVTATETGRQPAAGPASEALAPGREEVRGIKSETDSTVEVDGVAGELHDLRSEGNVSPTGFDAGVGSGSGTRPEPEHPEKVCTGQKRAKEAQGGGSSAKKPKRNHKTAVVNNKKKVKASNSSDSEELSAGESAPKAPPAKAAAAGMKAHSAKSPARIQSPGKCGKNGEKDSDLKEHGGRLPKIYKWSFQMADLEKLSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATTSLSSSSSSSSSSSSSSSSSPSSSSITAAVMLTLAEPSMATAPQNGVSVECR
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175177..1175346,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278880))
location: region:1175177-1278880:-1
so has part: feature:1278875-1278880:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175177-1175346:-1:exon

XP_038617000.1
type: Protein
SIO_000068: ncbiprotein

position:1175177:-1
position: 1175177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278875-1278880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1175177-1175346:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X2
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGAAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVQEISSDAAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSNRPCKECENAKEGKVHEEPGPEVKAVKAEEGATEPQETEKPAGEETERKENIKPPLGNRKNVPEPGATQADREKESGREKNEEDERLEEKAEEISKVDEALGAKGEAEEEKGKSGDEANKEEEEDEEEAEEEEEEEEEVEEEEEEEEEEDVDDPNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKHSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFPTSTPPETGSKADGAEGRSAEPAHVKAIEITSILNGLQASESSAEESERDAEPAPQRAESPGKKEPPGPDPSEPRSKEEQGPSSAPAESQTLPEPGGRREPEEFSEDSDSEEEDGASKKRKDAKREAGDKAAKPPAKRGKRRFGGGEDGAKAGSPSRKDDRAKGKEAPGLEHSSNSSSEDDEDEKAKVKGTPAKKYNGLEEKRKSLRATVFYSGFSEVAEKRLKLLTSSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPWDGGAAGEEQPAAATAAAAGEEERRPAGPRPGPDPDRPGPPGAEGKPAEEKAVETGDKKADFPSSGSNSVLNTPPTTPESPASVTATETGRQPAAGPASEALAPGREEVRGIKSETDSTVEVDGVAGELHDLRSEGNVSPTGFDAGVGSGSGTRPEPEHPEKVCTGQKRAKEAQGGGSSAKKPKRNHKTAVVNNKKKVKASNSSDSEELSAGESAPKAPPAKAAAAGMKAHSAKSPARIQSPGKCGKNGEKDSDLKEHGGRLPKIYKWSFQMADLEKLSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATTSLSSSSSSSSSSSSSSSSSPSSSSITAAVMLTLAEPSMATAPQNGVSVECR
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175177..1175346,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278880))
location: region:1175177-1278880:-1
so has part: feature:1278875-1278880:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175177-1175346:-1:exon

XP_038616996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1278875-1278880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1198437-1198715:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175177-1175346:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X3
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGAAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVQEISSDAAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSNRPCKECENAKEGKVHEEPGPEVKAVKAEEGATEPQETEKPAGEETERKENIKPPLGNRKNVPEPGATQADREKESGREKNEEDERLEEKAEEISKVDEALGAKGEAEEEKGKSGDEANKEEEEDEEEAEEEEEEEEEVEEEEEEEEEEDVDDPNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKHSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFPTSTPPETGSKADGAEGRSAEPAHVKAIEITSILNGLQASESSAEESERDAEPAPQRAESPGKKEPPGPDPSEPRSKEEQGPSSAPAESQTLPEPGGRREPEEFSEDSDSEEEDGASKKRKDAKREAGDKAAKPPAKRGKRRFGGGEDGAKAGSPSRKDDRAKGKEAPGLEHSSNSSSEDDEDEKAKVKGTPAKKYNGLEEKRKSLRATVFYSGFSEVAEKRLKLLTSSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPWDGGAAGEEQPAAATAAAAGEEERRPAGPRPGPDPDRPGPPGAEGKPAEEKAVETGDKKADFPSSGSNSVLNTPPTTPESPASVTATETGRQPAAGPASEALAPGREEVRGIKSETDSTVEVDGVAGELHDLRSEGNVSPTGFDAGVGSGSGTRPEPEHPEKVCTGQKRAKEAQGGGSSAKKPKRNHKTAVVNNKKKVKASNSSDSEELSAGESAPKAPPAKAAAAGMKAHSAKSPARIQSPGKCGKNGEKDSDLKEHGGRLPKIYKWSFQMADLEKLSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKEREIPSRRP
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1175245..1175264,1175961..1176107,1177781..1177996,1181237..1181350,1184094..1185296,1187162..1187360,1192096..1192180,1198437..1198715,1203308..1203483,1206049..1206292,1208931..1209028,1212029..1212123,1213200..1213272,1216540..1216694,1217681..1217757,1218395..1218474,1221300..1221438,1224104..1224195,1226834..1226913,1229186..1229276,1233567..1233632,1234925..1235035,1278875..1278880))
location: region:1175245-1278880:-1
so has part: feature:1278875-1278880:-1:exon
so has part: feature:1234925-1235035:-1:exon
so has part: feature:1233567-1233632:-1:exon
so has part: feature:1229186-1229276:-1:exon
so has part: feature:1226834-1226913:-1:exon
so has part: feature:1224104-1224195:-1:exon
so has part: feature:1221300-1221438:-1:exon
so has part: feature:1218395-1218474:-1:exon
so has part: feature:1217681-1217757:-1:exon
so has part: feature:1216540-1216694:-1:exon
so has part: feature:1213200-1213272:-1:exon
so has part: feature:1212029-1212123:-1:exon
so has part: feature:1208931-1209028:-1:exon
so has part: feature:1206049-1206292:-1:exon
so has part: feature:1203308-1203483:-1:exon
so has part: feature:1198437-1198715:-1:exon
so has part: feature:1192096-1192180:-1:exon
so has part: feature:1187162-1187360:-1:exon
so has part: feature:1184094-1185296:-1:exon
so has part: feature:1181237-1181350:-1:exon
so has part: feature:1177781-1177996:-1:exon
so has part: feature:1175961-1176107:-1:exon
so has part: feature:1175245-1175264:-1:exon

XP_038616998.1
type: Protein
SIO_000068: ncbiprotein

position:1175245:-1
position: 1175245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278875-1278880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234925-1235035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233567-1233632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229186-1229276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226834-1226913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1224104-1224195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221300-1221438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218395-1218474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217681-1217757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216540-1216694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1213200-1213272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212029-1212123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208931-1209028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206049-1206292:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203308-1203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1198437-1198715:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1192096-1192180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1187162-1187360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184094-1185296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1181237-1181350:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1177781-1177996:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1175961-1176107:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1175245-1175264:-1:exon

GGPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1283500..1302455
location: region:1283500-1302455:1
so has part: feature:1283500-1302455:1:exon
subclass of: SO_0000010

119941013
type: Gene
SIO_000068: ncbigene

position:1283500:1
position: 1283500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302455:1
position: 1302455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283500-1302455:1:exon

GGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GGPS1
product: geranylgeranyl diphosphate synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761443.1
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1283500..1283529,1291045..1291140,1300433..1300503,1301211..1302455)
location: region:1283500-1302455:1
so has part: feature:1283500-1283529:1:exon
so has part: feature:1291045-1291140:1:exon
so has part: feature:1300433-1300503:1:exon
so has part: feature:1301211-1302455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1283500-1283529:1:exon

position:1283529:1
position: 1283529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291045-1291140:1:exon

position:1291045:1
position: 1291045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291140:1
position: 1291140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1300433-1300503:1:exon

position:1300433:1
position: 1300433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300503:1
position: 1300503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1301211-1302455:1:exon

position:1301211:1
position: 1301211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase
translation: MEVTQEASERILLEPYKYLLQLPGKQVRTKLSQAFDHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVRLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKKYCVHYLEDAGSFEYTRQTLKALESEAYKQIEALGGNPELVALIRHLSEMFREDDGN
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1291071..1291140,1300433..1300503,1301211..1301975)
location: region:1291071-1301975:1
so has part: feature:1291071-1291140:1:exon
so has part: feature:1300433-1300503:1:exon
so has part: feature:1301211-1301975:1:exon

XP_038617371.1
type: Protein
SIO_000068: ncbiprotein

position:1291071:1
position: 1291071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301975:1
position: 1301975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291071-1291140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300433-1300503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1301211-1301975:1:exon

TBCE
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1310937..1334745
location: region:1310937-1334745:1
so has part: feature:1310937-1334745:1:exon
subclass of: SO_0000010

119941020
type: Gene
SIO_000068: ncbigene

position:1310937:1
position: 1310937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334745:1
position: 1334745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310937-1334745:1:exon

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TBCE
product: tubulin folding cofactor E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761460.1
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1310937..1310973,1312454..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1331424..1331492,1332476..1332535,1334218..1334309,1334518..1334745)
location: region:1310937-1334745:1
so has part: feature:1310937-1310973:1:exon
so has part: feature:1312454-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1331424-1331492:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310937-1310973:1:exon

position:1310973:1
position: 1310973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312454-1312587:1:exon

position:1312454:1
position: 1312454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312587:1
position: 1312587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1316999-1317083:1:exon

position:1316999:1
position: 1316999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317083:1
position: 1317083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1318286-1318471:1:exon

position:1318286:1
position: 1318286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318471:1
position: 1318471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1319114-1319202:1:exon

position:1319114:1
position: 1319114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319202:1
position: 1319202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1320300-1320399:1:exon

position:1320300:1
position: 1320300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320399:1
position: 1320399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1321075-1321180:1:exon

position:1321075:1
position: 1321075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321180:1
position: 1321180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1322513-1322589:1:exon

position:1322513:1
position: 1322513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322589:1
position: 1322589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1322956-1323051:1:exon

position:1322956:1
position: 1322956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323051:1
position: 1323051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1325904-1325968:1:exon

position:1325904:1
position: 1325904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325968:1
position: 1325968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1326514-1326578:1:exon

position:1326514:1
position: 1326514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326578:1
position: 1326578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1328803-1328955:1:exon

position:1328803:1
position: 1328803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328955:1
position: 1328955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1329794-1329947:1:exon

position:1329794:1
position: 1329794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329947:1
position: 1329947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1331424-1331492:1:exon

position:1331424:1
position: 1331424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331492:1
position: 1331492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1332476-1332535:1:exon

position:1332476:1
position: 1332476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332535:1
position: 1332535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1334218-1334309:1:exon

position:1334218:1
position: 1334218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334309:1
position: 1334309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1334518-1334745:1:exon

position:1334518:1
position: 1334518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TBCE
product: tubulin folding cofactor E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761459.1
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1310939..1311011,1312454..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1331424..1331492,1332476..1332535,1334218..1334309,1334518..1334745)
location: region:1310939-1334745:1
so has part: feature:1310939-1311011:1:exon
so has part: feature:1312454-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1331424-1331492:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334745:1:exon

position:1310939:1
position: 1310939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310939-1311011:1:exon

position:1311011:1
position: 1311011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312454-1312587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316999-1317083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1318286-1318471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1319114-1319202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320300-1320399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1321075-1321180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322513-1322589:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322956-1323051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325904-1325968:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326514-1326578:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1328803-1328955:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1329794-1329947:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1331424-1331492:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1332476-1332535:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1334218-1334309:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1334518-1334745:1:exon

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TBCE
product: tubulin folding cofactor E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761461.1
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1310939..1311011,1312454..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1332476..1332535,1334218..1334309,1334518..1334745)
location: region:1310939-1334745:1
so has part: feature:1310939-1311011:1:exon
so has part: feature:1312454-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310939-1311011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312454-1312587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316999-1317083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1318286-1318471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1319114-1319202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320300-1320399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1321075-1321180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322513-1322589:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322956-1323051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325904-1325968:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326514-1326578:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1328803-1328955:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1329794-1329947:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1332476-1332535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1334218-1334309:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1334518-1334745:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X1
translation: MSDSLPADAVGRRIDVSGDLATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGSHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVGREQALVIGNRPVETIGFESVKKRQSQLNRLQEVSVCGYAVSCAGPKGEITKMCPNISKIDLSRNLLSSWGEVTRIADQLTDLEVLNLSENKLRFPPDDARPSPGTFSALKVLVLNRTGITWAEAMRCASGWPVLEELYLAANDLAVTSRPPDVLQTLWLLDLSDNPLVDENHLRFLASLPGLEQLLLSNTGLSSLHFPDAGIGGRTAMFPSLQYLVVSGNRITQWSFIDELDKLGRLQSLTCTRTPLTEGSEEPRTVRQLIIAKIGRLKVLNKCEILPEERQGAELDYRKKFGNDWKASGGHQQPELDKPSAEFLAAHPRYQLLCRRYGPPEDGELKVQQPFMLKNQLLTLTIKCPDRPAQKLIQKQLPDSMTVQKVKGLLSRLFKVPGSELRLSYESPKMEGREIQLESDQQPLQFYSVENGDRLLVRW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1312488..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1331424..1331492,1332476..1332535,1334218..1334309,1334518..1334610)
location: region:1312488-1334610:1
so has part: feature:1312488-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1331424-1331492:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334610:1:exon

XP_038617387.1
type: Protein
SIO_000068: ncbiprotein

position:1312488:1
position: 1312488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334610:1
position: 1334610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312488-1312587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316999-1317083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1318286-1318471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1319114-1319202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320300-1320399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321075-1321180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322513-1322589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322956-1323051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1325904-1325968:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326514-1326578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1328803-1328955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1329794-1329947:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1331424-1331492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1332476-1332535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1334218-1334309:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1334518-1334610:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X1
translation: MSDSLPADAVGRRIDVSGDLATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGSHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVGREQALVIGNRPVETIGFESVKKRQSQLNRLQEVSVCGYAVSCAGPKGEITKMCPNISKIDLSRNLLSSWGEVTRIADQLTDLEVLNLSENKLRFPPDDARPSPGTFSALKVLVLNRTGITWAEAMRCASGWPVLEELYLAANDLAVTSRPPDVLQTLWLLDLSDNPLVDENHLRFLASLPGLEQLLLSNTGLSSLHFPDAGIGGRTAMFPSLQYLVVSGNRITQWSFIDELDKLGRLQSLTCTRTPLTEGSEEPRTVRQLIIAKIGRLKVLNKCEILPEERQGAELDYRKKFGNDWKASGGHQQPELDKPSAEFLAAHPRYQLLCRRYGPPEDGELKVQQPFMLKNQLLTLTIKCPDRPAQKLIQKQLPDSMTVQKVKGLLSRLFKVPGSELRLSYESPKMEGREIQLESDQQPLQFYSVENGDRLLVRW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1312488..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1331424..1331492,1332476..1332535,1334218..1334309,1334518..1334610)
location: region:1312488-1334610:1
so has part: feature:1312488-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1331424-1331492:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334610:1:exon

XP_038617388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1312488-1312587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316999-1317083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1318286-1318471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1319114-1319202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320300-1320399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321075-1321180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322513-1322589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322956-1323051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1325904-1325968:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326514-1326578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1328803-1328955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1329794-1329947:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1331424-1331492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1332476-1332535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1334218-1334309:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1334518-1334610:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X2
translation: MSDSLPADAVGRRIDVSGDLATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGSHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVGREQALVIGNRPVETIGFESVKKRQSQLNRLQEVSVCGYAVSCAGPKGEITKMCPNISKIDLSRNLLSSWGEVTRIADQLTDLEVLNLSENKLRFPPDDARPSPGTFSALKVLVLNRTGITWAEAMRCASGWPVLEELYLAANDLAVTSRPPDVLQTLWLLDLSDNPLVDENHLRFLASLPGLEQLLLSNTGLSSLHFPDAGIGGRTAMFPSLQYLVVSGNRITQWSFIDELDKLGRLQSLTCTRTPLTEGSEEPRTVRQLIIAKIGRLKVLNKCEILPEERQGAELDYRKKFGNDWKASGGHQQPELDKPSAEFLAAHPRYQLLCRTLTIKCPDRPAQKLIQKQLPDSMTVQKVKGLLSRLFKVPGSELRLSYESPKMEGREIQLESDQQPLQFYSVENGDRLLVRW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1312488..1312587,1316999..1317083,1318286..1318471,1319114..1319202,1320300..1320399,1321075..1321180,1322513..1322589,1322956..1323051,1325904..1325968,1326514..1326578,1328803..1328955,1329794..1329947,1332476..1332535,1334218..1334309,1334518..1334610)
location: region:1312488-1334610:1
so has part: feature:1312488-1312587:1:exon
so has part: feature:1316999-1317083:1:exon
so has part: feature:1318286-1318471:1:exon
so has part: feature:1319114-1319202:1:exon
so has part: feature:1320300-1320399:1:exon
so has part: feature:1321075-1321180:1:exon
so has part: feature:1322513-1322589:1:exon
so has part: feature:1322956-1323051:1:exon
so has part: feature:1325904-1325968:1:exon
so has part: feature:1326514-1326578:1:exon
so has part: feature:1328803-1328955:1:exon
so has part: feature:1329794-1329947:1:exon
so has part: feature:1332476-1332535:1:exon
so has part: feature:1334218-1334309:1:exon
so has part: feature:1334518-1334610:1:exon

XP_038617389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1312488-1312587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316999-1317083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1318286-1318471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1319114-1319202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320300-1320399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321075-1321180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322513-1322589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322956-1323051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1325904-1325968:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326514-1326578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1328803-1328955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1329794-1329947:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1332476-1332535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1334218-1334309:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1334518-1334610:1:exon

B3GALNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1334803..1354346)
location: region:1334803-1354346:-1
so has part: feature:1334803-1354346:-1:exon
subclass of: SO_0000010

119941022
type: Gene
SIO_000068: ncbigene

position:1334803:-1
position: 1334803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354346:-1
position: 1354346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334803-1354346:-1:exon

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761462.1
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1334803..1335388,1335770..1335826,1336628..1336787,1337386..1337511,1337641..1337824,1339237..1339315,1340815..1340925,1344892..1344987,1347059..1347252,1349260..1349360,1350736..1350883,1354198..1354323))
location: region:1334803-1354323:-1
so has part: feature:1354198-1354323:-1:exon
so has part: feature:1350736-1350883:-1:exon
so has part: feature:1349260-1349360:-1:exon
so has part: feature:1347059-1347252:-1:exon
so has part: feature:1344892-1344987:-1:exon
so has part: feature:1340815-1340925:-1:exon
so has part: feature:1339237-1339315:-1:exon
so has part: feature:1337641-1337824:-1:exon
so has part: feature:1337386-1337511:-1:exon
so has part: feature:1336628-1336787:-1:exon
so has part: feature:1335770-1335826:-1:exon
so has part: feature:1334803-1335388:-1:exon

position:1354323:-1
position: 1354323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354198-1354323:-1:exon

position:1354198:-1
position: 1354198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1350736-1350883:-1:exon

position:1350736:-1
position: 1350736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350883:-1
position: 1350883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1349260-1349360:-1:exon

position:1349260:-1
position: 1349260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349360:-1
position: 1349360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1347059-1347252:-1:exon

position:1347059:-1
position: 1347059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347252:-1
position: 1347252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1344892-1344987:-1:exon

position:1344892:-1
position: 1344892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344987:-1
position: 1344987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1340815-1340925:-1:exon

position:1340815:-1
position: 1340815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340925:-1
position: 1340925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1339237-1339315:-1:exon

position:1339237:-1
position: 1339237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339315:-1
position: 1339315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1337641-1337824:-1:exon

position:1337641:-1
position: 1337641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337824:-1
position: 1337824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1337386-1337511:-1:exon

position:1337386:-1
position: 1337386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337511:-1
position: 1337511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1336628-1336787:-1:exon

position:1336628:-1
position: 1336628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336787:-1
position: 1336787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1335770-1335826:-1:exon

position:1335770:-1
position: 1335770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335826:-1
position: 1335826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1334803-1335388:-1:exon

position:1335388:-1
position: 1335388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1
translation: MRNWLVLLGPALLGAALHLWLRPRPAPPGGPAEARRGASSQVDVVVGVLSARHHRDLRAVIRDTWLNHLNHHPAFHRRVLVKFIIGAHGCEVPVEDREDPYSCRLLNITDPVLNQEIEAFGLPEETASEERGDRVVSVSFRVLYPIVISSLGVFYDAGEAGFRRNITVKLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGIIVWESQDLRGLVSKNLHRVTVNDGGGVLRVNTAGEGALPHEFLEGVEGVAGGFIYTIQDGDALLQNLRTRPERFLRHVAGLREEDALLRAESAAYGDIVFVDIVDTYRNVPAKLLHFYRWTVQTASFDLLLKTDDDCYIDLEAVFNRIAHKHLRRPNLWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVQWLAANAERLKTYQGEDVSMGIWMAALGPKRFQDGLWLCEKTCEPGMLSSPQYSPRELAELWRLKESCGDPCRCGAG
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1335254..1335388,1335770..1335826,1336628..1336787,1337386..1337511,1337641..1337824,1339237..1339315,1340815..1340925,1344892..1344987,1347059..1347252,1349260..1349360,1350736..1350883,1354198..1354282))
location: region:1335254-1354282:-1
so has part: feature:1354198-1354282:-1:exon
so has part: feature:1350736-1350883:-1:exon
so has part: feature:1349260-1349360:-1:exon
so has part: feature:1347059-1347252:-1:exon
so has part: feature:1344892-1344987:-1:exon
so has part: feature:1340815-1340925:-1:exon
so has part: feature:1339237-1339315:-1:exon
so has part: feature:1337641-1337824:-1:exon
so has part: feature:1337386-1337511:-1:exon
so has part: feature:1336628-1336787:-1:exon
so has part: feature:1335770-1335826:-1:exon
so has part: feature:1335254-1335388:-1:exon

XP_038617390.1
type: Protein
SIO_000068: ncbiprotein

position:1335254:-1
position: 1335254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354282:-1
position: 1354282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354198-1354282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1350736-1350883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349260-1349360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347059-1347252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344892-1344987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340815-1340925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339237-1339315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337641-1337824:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1337386-1337511:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1336628-1336787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335770-1335826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335254-1335388:-1:exon

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038761463.1
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1336673..1336787,1337386..1337804,1339237..1339315,1340815..1340925,1344892..1344987,1347059..1347252,1349260..1349360,1350736..1350883,1354198..1354346))
location: region:1336673-1354346:-1
so has part: feature:1354198-1354346:-1:exon
so has part: feature:1350736-1350883:-1:exon
so has part: feature:1349260-1349360:-1:exon
so has part: feature:1347059-1347252:-1:exon
so has part: feature:1344892-1344987:-1:exon
so has part: feature:1340815-1340925:-1:exon
so has part: feature:1339237-1339315:-1:exon
so has part: feature:1337386-1337804:-1:exon
so has part: feature:1336673-1336787:-1:exon

position:1336673:-1
position: 1336673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354198-1354346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1350736-1350883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349260-1349360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347059-1347252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344892-1344987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340815-1340925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339237-1339315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337386-1337804:-1:exon

position:1337804:-1
position: 1337804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1336673-1336787:-1:exon

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X2
translation: MRNWLVLLGPALLGAALHLWLRPRPAPPGGPAEARRGASSQVDVVVGVLSARHHRDLRAVIRDTWLNHLNHHPAFHRRVLVKFIIGAHGCEVPVEDREDPYSCRLLNITDPVLNQEIEAFGLPEETASEERGDRVVSVSFRVLYPIVISSLGVFYDAGEAGFRRNITVKLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGIIVWESQDLRGLVSKNLHRVTVNDGGGVLRVNTAGEGALPHEFLEGVEGVAGGFIYTIQEPPHAAGEVPPPRRRAPGGGRPVEGRERRVRRHRVRGHRRHLQKRAREAAPLLQVVSETGWGSGPLPSSSSSPRGLSQAAAGRPGARLGLVSYLFGQQDRSDGQLRPVTEDGRRLLHRLGGRVQQDRPQASAAAKSLVGKFQAELGG
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1336764..1336787,1337386..1337804,1339237..1339315,1340815..1340925,1344892..1344987,1347059..1347252,1349260..1349360,1350736..1350883,1354198..1354282))
location: region:1336764-1354282:-1
so has part: feature:1354198-1354282:-1:exon
so has part: feature:1350736-1350883:-1:exon
so has part: feature:1349260-1349360:-1:exon
so has part: feature:1347059-1347252:-1:exon
so has part: feature:1344892-1344987:-1:exon
so has part: feature:1340815-1340925:-1:exon
so has part: feature:1339237-1339315:-1:exon
so has part: feature:1337386-1337804:-1:exon
so has part: feature:1336764-1336787:-1:exon

XP_038617391.1
type: Protein
SIO_000068: ncbiprotein

position:1336764:-1
position: 1336764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354198-1354282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1350736-1350883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349260-1349360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347059-1347252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344892-1344987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340815-1340925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339237-1339315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337386-1337804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1336764-1336787:-1:exon

GNG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GNG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1366672..1375249)
location: region:1366672-1375249:-1
so has part: feature:1366672-1375249:-1:exon
subclass of: SO_0000010

119940923
type: Gene
SIO_000068: ncbigene

position:1366672:-1
position: 1366672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375249:-1
position: 1375249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366672-1375249:-1:exon

GNG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GNG4
product: G protein subunit gamma 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038761317.1
SIO_010081: GNG4
subclass of: SO_0000673
so part of: GNG4
location: complement(join(1366672..1367006,1375132..1375249))
location: region:1366672-1375249:-1
so has part: feature:1375132-1375249:-1:exon
so has part: feature:1366672-1367006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1375132-1375249:-1:exon

position:1375132:-1
position: 1375132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366672-1367006:-1:exon

position:1367006:-1
position: 1367006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GNG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
translation: MKDIMANSSTTSVSQARKAVEQLKMEACMDRIKVSKAAADLLAYCDAHLREDPLIIPVPASENPFREKKFFCTIL
SIO_010081: GNG4
subclass of: SO_0000673
so part of: GNG4
location: complement(join(1366878..1367006,1375132..1375230))
location: region:1366878-1375230:-1
so has part: feature:1375132-1375230:-1:exon
so has part: feature:1366878-1367006:-1:exon

XP_038617245.1
type: Protein
SIO_000068: ncbiprotein

position:1366878:-1
position: 1366878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375230:-1
position: 1375230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1375132-1375230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366878-1367006:-1:exon

LYST
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LYST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1393135..1548192)
location: region:1393135-1548192:-1
so has part: feature:1393135-1548192:-1:exon
subclass of: SO_0000010

119940576
type: Gene
SIO_000068: ncbigene

position:1393135:-1
position: 1393135
reference: sequence
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position:1548192:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1393135-1548192:-1:exon

LYST
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LYST
product: lysosomal trafficking regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038760742.1
SIO_010081: LYST
subclass of: SO_0000673
so part of: LYST
location: complement(join(1393135..1395243,1396469..1396540,1398054..1398210,1399559..1399656,1401300..1401439,1406365..1406463,1409533..1409669,1413830..1414019,1416107..1416337,1421603..1421820,1422986..1423126,1426518..1426674,1433132..1433198,1436896..1437140,1437837..1437989,1440772..1440827,1444264..1444325,1445857..1445953,1446039..1446184,1448720..1448908,1449180..1449256,1451251..1451415,1457060..1457266,1463004..1463182,1464775..1464966,1470107..1470259,1470912..1471078,1475781..1476011,1478826..1478995,1480104..1480281,1482216..1482834,1484220..1484351,1485904..1486102,1487470..1487607,1488494..1488643,1489171..1489344,1490459..1490704,1491636..1491826,1495139..1495299,1496557..1496730,1498085..1498229,1499640..1500048,1502206..1502315,1504727..1504793,1506952..1507178,1509561..1509651,1510993..1511154,1512775..1513639,1516397..1518347,1520003..1520093,1521223..1521421,1526694..1526784,1548140..1548192))
location: region:1393135-1548192:-1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 27
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SIO_000300: 29
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SIO_000300: 32
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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SIO_000300: 38
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SIO_000300: 39
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SIO_000300: 42
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SIO_000300: 47
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SIO_000300: 49
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SIO_000300: 50
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SIO_000300: 51
SIO_000628: feature:1398054-1398210:-1:exon

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urn:…
SIO_000300: 52
SIO_000628: feature:1396469-1396540:-1:exon

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urn:…
SIO_000300: 53
SIO_000628: feature:1393135-1395243:-1:exon

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LYST
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LYST
product: lysosomal trafficking regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038760741.1
SIO_010081: LYST
subclass of: SO_0000673
so part of: LYST
location: complement(join(1393135..1395243,1396469..1396540,1398054..1398210,1399559..1399656,1401300..1401439,1406365..1406463,1409533..1409669,1413830..1414019,1416107..1416337,1421603..1421820,1422986..1423126,1426518..1426674,1433132..1433198,1436896..1437140,1437837..1437989,1440772..1440827,1444264..1444325,1445857..1445953,1446039..1446184,1448720..1448908,1449180..1449256,1451251..1451415,1457060..1457266,1463004..1463182,1464775..1464966,1470107..1470259,1470912..1471078,1475781..1476011,1478826..1478995,1480104..1480281,1482216..1482834,1484220..1484351,1485904..1486102,1487470..1487607,1488494..1488643,1489171..1489344,1490459..1490704,1491636..1491826,1495139..1495299,1496557..1496730,1498085..1498229,1499640..1500048,1502206..1502315,1504727..1504793,1506952..1507178,1509495..1509651,1510993..1511154,1512775..1513639,1516397..1518347,1520003..1520093,1521223..1521421,1526694..1526784,1548140..1548192))
location: region:1393135-1548192:-1
so has part: feature:1548140-1548192:-1:exon
so has part: feature:1526694-1526784:-1:exon
so has part: feature:1521223-1521421:-1:exon
so has part: feature:1520003-1520093:-1:exon
so has part: feature:1516397-1518347:-1:exon
so has part: feature:1512775-1513639:-1:exon
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so has part: feature:1506952-1507178:-1:exon
so has part: feature:1504727-1504793:-1:exon
so has part: feature:1502206-1502315:-1:exon
so has part: feature:1499640-1500048:-1:exon
so has part: feature:1498085-1498229:-1:exon
so has part: feature:1496557-1496730:-1:exon
so has part: feature:1495139-1495299:-1:exon
so has part: feature:1491636-1491826:-1:exon
so has part: feature:1490459-1490704:-1:exon
so has part: feature:1489171-1489344:-1:exon
so has part: feature:1488494-1488643:-1:exon
so has part: feature:1487470-1487607:-1:exon
so has part: feature:1485904-1486102:-1:exon
so has part: feature:1484220-1484351:-1:exon
so has part: feature:1482216-1482834:-1:exon
so has part: feature:1480104-1480281:-1:exon
so has part: feature:1478826-1478995:-1:exon
so has part: feature:1475781-1476011:-1:exon
so has part: feature:1470912-1471078:-1:exon
so has part: feature:1470107-1470259:-1:exon
so has part: feature:1464775-1464966:-1:exon
so has part: feature:1463004-1463182:-1:exon
so has part: feature:1457060-1457266:-1:exon
so has part: feature:1451251-1451415:-1:exon
so has part: feature:1449180-1449256:-1:exon
so has part: feature:1448720-1448908:-1:exon
so has part: feature:1446039-1446184:-1:exon
so has part: feature:1445857-1445953:-1:exon
so has part: feature:1444264-1444325:-1:exon
so has part: feature:1440772-1440827:-1:exon
so has part: feature:1437837-1437989:-1:exon
so has part: feature:1436896-1437140:-1:exon
so has part: feature:1433132-1433198:-1:exon
so has part: feature:1426518-1426674:-1:exon
so has part: feature:1422986-1423126:-1:exon
so has part: feature:1421603-1421820:-1:exon
so has part: feature:1416107-1416337:-1:exon
so has part: feature:1413830-1414019:-1:exon
so has part: feature:1409533-1409669:-1:exon
so has part: feature:1406365-1406463:-1:exon
so has part: feature:1401300-1401439:-1:exon
so has part: feature:1399559-1399656:-1:exon
so has part: feature:1398054-1398210:-1:exon
so has part: feature:1396469-1396540:-1:exon
so has part: feature:1393135-1395243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548140-1548192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1526694-1526784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1521223-1521421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520003-1520093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1516397-1518347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1512775-1513639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1510993-1511154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1509495-1509651:-1:exon

position:1509495:-1
position: 1509495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1506952-1507178:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1504727-1504793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502206-1502315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1499640-1500048:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1498085-1498229:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1496557-1496730:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1495139-1495299:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1491636-1491826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1490459-1490704:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1489171-1489344:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1488494-1488643:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1487470-1487607:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485904-1486102:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1484220-1484351:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1482216-1482834:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1480104-1480281:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1478826-1478995:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1475781-1476011:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1470912-1471078:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1470107-1470259:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1464775-1464966:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1463004-1463182:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1457060-1457266:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1451251-1451415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1449180-1449256:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1448720-1448908:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446039-1446184:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1445857-1445953:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1444264-1444325:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1440772-1440827:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1437837-1437989:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1436896-1437140:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1433132-1433198:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1426518-1426674:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1422986-1423126:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1421603-1421820:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1416107-1416337:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1413830-1414019:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1409533-1409669:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1406365-1406463:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1401300-1401439:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1399559-1399656:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1398054-1398210:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1396469-1396540:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1393135-1395243:-1:exon

LYST
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LYST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-trafficking regulator isoform X2
translation: MSSDSNSLAREFLTDVNRLCNAVVQRAEAREEEEEETHMAALGQYLVQGRGFLLLTQLNSIIDQALTCREELLTLLLSLLPLVWRIPVQEEKAVDFNLPFSADVVLTKEANSSLLKSAQEKPSLDGRAPSAHGPARARAPLQNRHQRKTTHRYSVRDARKSQLSTSDSEANSDEKSLAPGRYRRARLTPRLVVQTPKEDPPPARAAPAAVAVPGWASATAVPSEPAAASLDRSPFDLCHVLLSLLEKVCRFDSHAHPKSALAANVVPTLTEFLAGSGEAGGPRGPAESRGVCAGWTEEPVALVQRMLFRTALRLAPVEVGPAEAAPDGLRKNLTEVLRAASRIRARWAEGDPREEQEAPAFSRHRHRALLLPELLRGVLQLLIGCLQGAASHPSSFSQAMELVREFIQHQGFQLVEAAVLRLEGLAAGEAADHLRALLSWVLRLIGAVKKAKAEQLHQSVCPRKRHRRCEYSRFLHHHRDLSGLLVSAFKSRVSERPFEESADGEVRYPERCCCIAVCAHQCLRLLRRATLGSTRVQILSGIHGVGVCCCMDPESVIGPLLHAFGSPGLTAFQPHVLGVLAQLVLDQLGGAEPAPQPKPAACNVCAVDGDRLAPLEAALRGSPAEGGPAPAARRPPGILPSGGGEELLWKWDALEAYRPLVLGAEPGPGAQLAGHVCHLIHRGNAVLRWKLYSYVFHPLLQRGAELALRSRQPGGPRPAGSDGWWPPQEVLQIYVQALPGLLRSRVLRDLFLSCNGVNQMIELNYLDGIRSHSLKALETLIVCLGEQQEDAPVPEAGGPGREQEGLPFPAPDRPASSESPQSLSRFYAGLRESCPRKRKSADEDVHVNTVNLFLCVAFLCVSREGDGERDPANDSEDTSGYDSTASEPLPQTLPALAPESLALPPPEQTRRAADTWTAGRAVYMASPVFQKQFHRLGGLEVCRRLITMLIQALGGNARGEEAGERGRDPGAGGPGPSDSPPATAAALGEASAEDRKERECSLQRIRLLEALLAICLHSARSSQQKVEVELPNQNLSVDDVLLEMRAHLSRSKVVETALAEPLFDSLLRVALGDYPPDADRSEEKAEKSHQAKAETVSQPGDLSEEAEESQDCNLKLFGGDSKGEAERRRLSCSPGDLTENLPTGELIYPEICTLVLNLLSAAKTRVDVLAHVFGSFLRVVRQKEKNITFLLQQGTVRNLLGGFLSILAQTDSSFQACQIVLMDLLVSLMSSRTCSEELTLLLRTFLEKSPSTEVLLKGILKIVESNAAMSPLQYIAFPLLQIPNLSSSSSSQKGLGSSKAPGLWKRARVLQGRKETDGGAHQLLSSWHVAPVHLALVGQNCWPHMSEGFSVSVWLSAEGLYEAGSPPDRGKKRKRSRPGGQDGSPSGAEGGRRGGVASVSSGESPADDGCVHLLSLGSKVLMIQVWADLSTGALIFRMCMDPNDDMKAGLLAQVESQENVFLPGKWQHLALTYSQQPEGKKNIHGKLSMWVSGQRKPDVALDYTLPRKTTLSSDSNKTFCMVGHCLSSQEELLRVAGRWDLGNLLLFNGAKIGPQEAFYLYACGPDFTSVMPCKYGKSANDFSKYISKEILQCEQIRELFMSKKDVDLSPLIEGLAVVYSSHRPAQYTIYEPVIRLKGQVKTTLSQRPFSTKEVQSILLEPHLLKSLQPVEHRTLQGVLHEIGGAGAFVFLFARVVDISSCEETQALALHIILSLTKYNQQRIQEMENCNGFSMIHQVLIKQKCIVGFHFLKTLLEGCCGEEILHVNEDGQFQLDANSSAVIRDVKLLEELLFDWKIWSKAEQGVWETLLAALEVLIRDSHHQQMFNIKQLLKARVVHHFLLTCQVLQEHKEGHLTSMPREVCRSFVKIIEEVLGSPPDLELLTLIFHFLIAVHPPTNTYVCHNPMNFYFSLHIDGKLFLEKVQSIVYMRHSSSGGKSIASPGFAITSPSGFTASPPDGNTSSHRSPSQETPSPAALLRSRSLPASPTASPDARPRRLAG…
SIO_010081: LYST
subclass of: SO_0000673
so part of: LYST
location: complement(join(1395105..1395243,1396469..1396540,1398054..1398210,1399559..1399656,1401300..1401439,1406365..1406463,1409533..1409669,1413830..1414019,1416107..1416337,1421603..1421820,1422986..1423126,1426518..1426674,1433132..1433198,1436896..1437140,1437837..1437989,1440772..1440827,1444264..1444325,1445857..1445953,1446039..1446184,1448720..1448908,1449180..1449256,1451251..1451415,1457060..1457266,1463004..1463182,1464775..1464966,1470107..1470259,1470912..1471078,1475781..1476011,1478826..1478995,1480104..1480281,1482216..1482834,1484220..1484351,1485904..1486102,1487470..1487607,1488494..1488643,1489171..1489344,1490459..1490704,1491636..1491826,1495139..1495299,1496557..1496730,1498085..1498229,1499640..1500048,1502206..1502315,1504727..1504793,1506952..1507178,1509561..1509651,1510993..1511154,1512775..1513639,1516397..1518347,1520003..1520093,1521223..1521414))
location: region:1395105-1521414:-1
so has part: feature:1521223-1521414:-1:exon
so has part: feature:1520003-1520093:-1:exon
so has part: feature:1516397-1518347:-1:exon
so has part: feature:1512775-1513639:-1:exon
so has part: feature:1510993-1511154:-1:exon
so has part: feature:1509561-1509651:-1:exon
so has part: feature:1506952-1507178:-1:exon
so has part: feature:1504727-1504793:-1:exon
so has part: feature:1502206-1502315:-1:exon
so has part: feature:1499640-1500048:-1:exon
so has part: feature:1498085-1498229:-1:exon
so has part: feature:1496557-1496730:-1:exon
so has part: feature:1495139-1495299:-1:exon
so has part: feature:1491636-1491826:-1:exon
so has part: feature:1490459-1490704:-1:exon
so has part: feature:1489171-1489344:-1:exon
so has part: feature:1488494-1488643:-1:exon
so has part: feature:1487470-1487607:-1:exon
so has part: feature:1485904-1486102:-1:exon
so has part: feature:1484220-1484351:-1:exon
so has part: feature:1482216-1482834:-1:exon
so has part: feature:1480104-1480281:-1:exon
so has part: feature:1478826-1478995:-1:exon
so has part: feature:1475781-1476011:-1:exon
so has part: feature:1470912-1471078:-1:exon
so has part: feature:1470107-1470259:-1:exon
so has part: feature:1464775-1464966:-1:exon
so has part: feature:1463004-1463182:-1:exon
so has part: feature:1457060-1457266:-1:exon
so has part: feature:1451251-1451415:-1:exon
so has part: feature:1449180-1449256:-1:exon
so has part: feature:1448720-1448908:-1:exon
so has part: feature:1446039-1446184:-1:exon
so has part: feature:1445857-1445953:-1:exon
so has part: feature:1444264-1444325:-1:exon
so has part: feature:1440772-1440827:-1:exon
so has part: feature:1437837-1437989:-1:exon
so has part: feature:1436896-1437140:-1:exon
so has part: feature:1433132-1433198:-1:exon
so has part: feature:1426518-1426674:-1:exon
so has part: feature:1422986-1423126:-1:exon
so has part: feature:1421603-1421820:-1:exon
so has part: feature:1416107-1416337:-1:exon
so has part: feature:1413830-1414019:-1:exon
so has part: feature:1409533-1409669:-1:exon
so has part: feature:1406365-1406463:-1:exon
so has part: feature:1401300-1401439:-1:exon
so has part: feature:1399559-1399656:-1:exon
so has part: feature:1398054-1398210:-1:exon
so has part: feature:1396469-1396540:-1:exon
so has part: feature:1395105-1395243:-1:exon

XP_038616670.1
type: Protein
SIO_000068: ncbiprotein

position:1395105:-1
position: 1395105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521414:-1
position: 1521414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1521223-1521414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1520003-1520093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1516397-1518347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1512775-1513639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1510993-1511154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509561-1509651:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1506952-1507178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1504727-1504793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1502206-1502315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499640-1500048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1498085-1498229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1496557-1496730:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1495139-1495299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491636-1491826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1490459-1490704:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1489171-1489344:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1488494-1488643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1487470-1487607:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1485904-1486102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1484220-1484351:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1482216-1482834:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1480104-1480281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1478826-1478995:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1475781-1476011:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1470912-1471078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1470107-1470259:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1464775-1464966:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1463004-1463182:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1457060-1457266:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1451251-1451415:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1449180-1449256:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1448720-1448908:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1446039-1446184:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1445857-1445953:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1444264-1444325:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1440772-1440827:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1437837-1437989:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1436896-1437140:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1433132-1433198:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1426518-1426674:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1422986-1423126:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1421603-1421820:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1416107-1416337:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1413830-1414019:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1409533-1409669:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1406365-1406463:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1401300-1401439:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1399559-1399656:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1398054-1398210:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1396469-1396540:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1395105-1395243:-1:exon

LYST
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LYST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-trafficking regulator isoform X1
translation: MSSDSNSLAREFLTDVNRLCNAVVQRAEAREEEEEETHMAALGQYLVQGRGFLLLTQLNSIIDQALTCREELLTLLLSLLPLVWRIPVQEEKAVDFNLPFSADVVLTKEANSSLLKSAQEKPSLDGRAPSAHGPARARAPLQNRHQRKTTHRYSVRDARKSQLSTSDSEANSDEKSLAPGRYRRARLTPRLVVQTPKEDPPPARAAPAAVAVPGWASATAVPSEPAAASLDRSPFDLCHVLLSLLEKVCRFDSHAHPKSALAANVVPTLTEFLAGSGEAGGPRGPAESRGVCAGWTEEPVALVQRMLFRTALRLAPVEVGPAEAAPDGLRKNLTEVLRAASRIRARWAEGDPREEQEAPAFSRHRHRALLLPELLRGVLQLLIGCLQGAASHPSSFSQAMELVREFIQHQGFQLVEAAVLRLEGLAAGEAADHLRALLSWVLRLIGAVKKAKAEQLHQSVCPRKRHRRCEYSRFLHHHRDLSGLLVSAFKSRVSERPFEESADGEVRYPERCCCIAVCAHQCLRLLRRATLGSTRVQILSGIHGVGVCCCMDPESVIGPLLHAFGSPGLTAFQPHVLGVLAQLVLDQLGGAEPAPQPKPAACNVCAVDGDRLAPLEAALRGSPAEGGPAPAARRPPGILPSGGGEELLWKWDALEAYRPLVLGAEPGPGAQLAGHVCHLIHRGNAVLRWKLYSYVFHPLLQRGAELALRSRQPGGPRPAGSDGWWPPQEVLQIYVQALPGLLRSRVLRDLFLSCNGVNQMIELNYLDGIRSHSLKALETLIVCLGEQQEDAPVPEAGGPGREQEGLPFPAPDRPASSESPQSLSRFYAGLRESCPRKRKSADEDVHVNTVNLFLCVAFLCVSREGDGERDPANDSEDTSGYDSTASEPLPQTLPALAPESLALPPPEQTRRAADTWTAGRAVYMASPVFQKQFHRLGGLEVCRRLITMLIQALGGNARGEEAGERGRDPGAGGPGPSDSPPATAAALGEASAEDRKERECSLQRIRLLEALLAICLHSARSSQQKVEVELPNQNLSVDDVLLEMRAHLSRSKVVETALAEPLFDSLLRVALGDYPPDADRSEEKAEKSHQAKAETVSQPGDLSEEAEESQDCNLKLFGEEEGYEADSESNPESSESQEEGGDSKGEAERRRLSCSPGDLTENLPTGELIYPEICTLVLNLLSAAKTRVDVLAHVFGSFLRVVRQKEKNITFLLQQGTVRNLLGGFLSILAQTDSSFQACQIVLMDLLVSLMSSRTCSEELTLLLRTFLEKSPSTEVLLKGILKIVESNAAMSPLQYIAFPLLQIPNLSSSSSSQKGLGSSKAPGLWKRARVLQGRKETDGGAHQLLSSWHVAPVHLALVGQNCWPHMSEGFSVSVWLSAEGLYEAGSPPDRGKKRKRSRPGGQDGSPSGAEGGRRGGVASVSSGESPADDGCVHLLSLGSKVLMIQVWADLSTGALIFRMCMDPNDDMKAGLLAQVESQENVFLPGKWQHLALTYSQQPEGKKNIHGKLSMWVSGQRKPDVALDYTLPRKTTLSSDSNKTFCMVGHCLSSQEELLRVAGRWDLGNLLLFNGAKIGPQEAFYLYACGPDFTSVMPCKYGKSANDFSKYISKEILQCEQIRELFMSKKDVDLSPLIEGLAVVYSSHRPAQYTIYEPVIRLKGQVKTTLSQRPFSTKEVQSILLEPHLLKSLQPVEHRTLQGVLHEIGGAGAFVFLFARVVDISSCEETQALALHIILSLTKYNQQRIQEMENCNGFSMIHQVLIKQKCIVGFHFLKTLLEGCCGEEILHVNEDGQFQLDANSSAVIRDVKLLEELLFDWKIWSKAEQGVWETLLAALEVLIRDSHHQQMFNIKQLLKARVVHHFLLTCQVLQEHKEGHLTSMPREVCRSFVKIIEEVLGSPPDLELLTLIFHFLIAVHPPTNTYVCHNPMNFYFSLHIDGKLFLEKVQSIVYMRHSSSGGKSIASPGFAITSPSGFTASPPDGNTSSHRSPSQETPSPAALL…
SIO_010081: LYST
subclass of: SO_0000673
so part of: LYST
location: complement(join(1395105..1395243,1396469..1396540,1398054..1398210,1399559..1399656,1401300..1401439,1406365..1406463,1409533..1409669,1413830..1414019,1416107..1416337,1421603..1421820,1422986..1423126,1426518..1426674,1433132..1433198,1436896..1437140,1437837..1437989,1440772..1440827,1444264..1444325,1445857..1445953,1446039..1446184,1448720..1448908,1449180..1449256,1451251..1451415,1457060..1457266,1463004..1463182,1464775..1464966,1470107..1470259,1470912..1471078,1475781..1476011,1478826..1478995,1480104..1480281,1482216..1482834,1484220..1484351,1485904..1486102,1487470..1487607,1488494..1488643,1489171..1489344,1490459..1490704,1491636..1491826,1495139..1495299,1496557..1496730,1498085..1498229,1499640..1500048,1502206..1502315,1504727..1504793,1506952..1507178,1509495..1509651,1510993..1511154,1512775..1513639,1516397..1518347,1520003..1520093,1521223..1521414))
location: region:1395105-1521414:-1
so has part: feature:1521223-1521414:-1:exon
so has part: feature:1520003-1520093:-1:exon
so has part: feature:1516397-1518347:-1:exon
so has part: feature:1512775-1513639:-1:exon
so has part: feature:1510993-1511154:-1:exon
so has part: feature:1509495-1509651:-1:exon
so has part: feature:1506952-1507178:-1:exon
so has part: feature:1504727-1504793:-1:exon
so has part: feature:1502206-1502315:-1:exon
so has part: feature:1499640-1500048:-1:exon
so has part: feature:1498085-1498229:-1:exon
so has part: feature:1496557-1496730:-1:exon
so has part: feature:1495139-1495299:-1:exon
so has part: feature:1491636-1491826:-1:exon
so has part: feature:1490459-1490704:-1:exon
so has part: feature:1489171-1489344:-1:exon
so has part: feature:1488494-1488643:-1:exon
so has part: feature:1487470-1487607:-1:exon
so has part: feature:1485904-1486102:-1:exon
so has part: feature:1484220-1484351:-1:exon
so has part: feature:1482216-1482834:-1:exon
so has part: feature:1480104-1480281:-1:exon
so has part: feature:1478826-1478995:-1:exon
so has part: feature:1475781-1476011:-1:exon
so has part: feature:1470912-1471078:-1:exon
so has part: feature:1470107-1470259:-1:exon
so has part: feature:1464775-1464966:-1:exon
so has part: feature:1463004-1463182:-1:exon
so has part: feature:1457060-1457266:-1:exon
so has part: feature:1451251-1451415:-1:exon
so has part: feature:1449180-1449256:-1:exon
so has part: feature:1448720-1448908:-1:exon
so has part: feature:1446039-1446184:-1:exon
so has part: feature:1445857-1445953:-1:exon
so has part: feature:1444264-1444325:-1:exon
so has part: feature:1440772-1440827:-1:exon
so has part: feature:1437837-1437989:-1:exon
so has part: feature:1436896-1437140:-1:exon
so has part: feature:1433132-1433198:-1:exon
so has part: feature:1426518-1426674:-1:exon
so has part: feature:1422986-1423126:-1:exon
so has part: feature:1421603-1421820:-1:exon
so has part: feature:1416107-1416337:-1:exon
so has part: feature:1413830-1414019:-1:exon
so has part: feature:1409533-1409669:-1:exon
so has part: feature:1406365-1406463:-1:exon
so has part: feature:1401300-1401439:-1:exon
so has part: feature:1399559-1399656:-1:exon
so has part: feature:1398054-1398210:-1:exon
so has part: feature:1396469-1396540:-1:exon
so has part: feature:1395105-1395243:-1:exon

XP_038616669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1521223-1521414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1520003-1520093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1516397-1518347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1512775-1513639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1510993-1511154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509495-1509651:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1506952-1507178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1504727-1504793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1502206-1502315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499640-1500048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1498085-1498229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1496557-1496730:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1495139-1495299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491636-1491826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1490459-1490704:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1489171-1489344:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1488494-1488643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1487470-1487607:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1485904-1486102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1484220-1484351:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1482216-1482834:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1480104-1480281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1478826-1478995:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1475781-1476011:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1470912-1471078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1470107-1470259:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1464775-1464966:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1463004-1463182:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1457060-1457266:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1451251-1451415:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1449180-1449256:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1448720-1448908:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1446039-1446184:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1445857-1445953:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1444264-1444325:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1440772-1440827:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1437837-1437989:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1436896-1437140:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1433132-1433198:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1426518-1426674:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1422986-1423126:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1421603-1421820:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1416107-1416337:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1413830-1414019:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1409533-1409669:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1406365-1406463:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1401300-1401439:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1399559-1399656:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1398054-1398210:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1396469-1396540:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1395105-1395243:-1:exon

NID1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NID1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1568691..1632848)
location: region:1568691-1632848:-1
so has part: feature:1568691-1632848:-1:exon
subclass of: SO_0000010

119940774
type: Gene
SIO_000068: ncbigene

position:1568691:-1
position: 1568691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632848:-1
position: 1632848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568691-1632848:-1:exon

NID1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NID1
product: nidogen 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038761084.1
SIO_010081: NID1
subclass of: SO_0000673
so part of: NID1
location: complement(join(1568691..1569158,1569941..1570053,1570830..1570953,1571099..1571256,1572263..1572434,1573052..1573178,1576056..1576229,1580196..1580423,1592328..1592450,1597868..1598017,1603216..1603344,1605831..1605974,1606734..1606982,1607068..1607268,1608289..1608540,1611577..1611726,1615918..1616312,1617718..1617947,1619565..1619864,1632636..1632848))
location: region:1568691-1632848:-1
so has part: feature:1632636-1632848:-1:exon
so has part: feature:1619565-1619864:-1:exon
so has part: feature:1617718-1617947:-1:exon
so has part: feature:1615918-1616312:-1:exon
so has part: feature:1611577-1611726:-1:exon
so has part: feature:1608289-1608540:-1:exon
so has part: feature:1607068-1607268:-1:exon
so has part: feature:1606734-1606982:-1:exon
so has part: feature:1605831-1605974:-1:exon
so has part: feature:1603216-1603344:-1:exon
so has part: feature:1597868-1598017:-1:exon
so has part: feature:1592328-1592450:-1:exon
so has part: feature:1580196-1580423:-1:exon
so has part: feature:1576056-1576229:-1:exon
so has part: feature:1573052-1573178:-1:exon
so has part: feature:1572263-1572434:-1:exon
so has part: feature:1571099-1571256:-1:exon
so has part: feature:1570830-1570953:-1:exon
so has part: feature:1569941-1570053:-1:exon
so has part: feature:1568691-1569158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1632636-1632848:-1:exon

position:1632636:-1
position: 1632636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619565-1619864:-1:exon

position:1619565:-1
position: 1619565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619864:-1
position: 1619864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1617718-1617947:-1:exon

position:1617718:-1
position: 1617718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617947:-1
position: 1617947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1615918-1616312:-1:exon

position:1615918:-1
position: 1615918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616312:-1
position: 1616312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1611577-1611726:-1:exon

position:1611577:-1
position: 1611577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611726:-1
position: 1611726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1608289-1608540:-1:exon

position:1608289:-1
position: 1608289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608540:-1
position: 1608540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1607068-1607268:-1:exon

position:1607068:-1
position: 1607068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607268:-1
position: 1607268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1606734-1606982:-1:exon

position:1606734:-1
position: 1606734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606982:-1
position: 1606982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1605831-1605974:-1:exon

position:1605831:-1
position: 1605831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605974:-1
position: 1605974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1603216-1603344:-1:exon

position:1603216:-1
position: 1603216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603344:-1
position: 1603344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1597868-1598017:-1:exon

position:1597868:-1
position: 1597868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598017:-1
position: 1598017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1592328-1592450:-1:exon

position:1592328:-1
position: 1592328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592450:-1
position: 1592450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1580196-1580423:-1:exon

position:1580196:-1
position: 1580196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580423:-1
position: 1580423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1576056-1576229:-1:exon

position:1576056:-1
position: 1576056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576229:-1
position: 1576229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1573052-1573178:-1:exon

position:1573052:-1
position: 1573052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573178:-1
position: 1573178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1572263-1572434:-1:exon

position:1572263:-1
position: 1572263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572434:-1
position: 1572434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1571099-1571256:-1:exon

position:1571099:-1
position: 1571099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571256:-1
position: 1571256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1570830-1570953:-1:exon

position:1570830:-1
position: 1570830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570953:-1
position: 1570953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1569941-1570053:-1:exon

position:1569941:-1
position: 1569941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570053:-1
position: 1570053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1568691-1569158:-1:exon

position:1569158:-1
position: 1569158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NID1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NID1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nidogen-1
translation: MLGLLLDLSGPGLGLSRTGLFPYGPNQGDLQLQPGDDRVAPPLLLRNRLHFYQLDALHNVYVSTNGYIATSQPPEKEVLPGKFPPTFGAIAPFLADLDTTDGRGKVFYREDSSPAVLQLAADCVLRGFPDLQFHPLSAVVVTWESVAPHHGPEGIAAQEDKRNTFQAVLASSDSSSYAVFLYPEDGLQFYGTRSKDTGDPVSATVGFSQGSQVGLFWTSDGAYNIFANDRESLENLAKSSNSGQQGIWVFEIGSPATANGVVAADFGSGPDGADYDEDDFDYDATVGPRAAPGGESPTRGPGEAATAGGPRGQSPAPAGPERPEAEGPSSSPAPELSTTWTRAFRFRARSFPQQPPQVIDVDEVEETGIVFSYNTDSRQTCANNRHQCSVHAECRDYATGFCCSCVAGYTGNGRQCVAEGSPQRVNGKVRGTVYVGGRQTPFVLDSTDLHSYVVMNHGRSYTAISTVSEALGPSLLPLAPLGGIIGWMFAVEQQGFKNGFSITGGEFTRHAEVTFLGQGEKLLIKQQLKGIDEHGHLTISTELEGRVPEIPSGSTVHIEPYTELYHFSDSVITSSSTREYTVTEPERDGGDARTSTSTYQWRQTIAFQQCSHEDSQQALPSTQQLAVDSVFVLYNRDEQILRYALSNSIGPIREGPPDSGGNPCYTGTHGCDTNAACRPGPDNSFTCDCSVGFRGDGRVCYDINECVEQSEACSSNSVCHNYPGTFRCECLEGYRFAEDGRTCVATDDERPTNYCENGLHDCDIPQRAQCVYTGGSTYTCSCLRGFSGDGQACEDVDECQQRPCHPDASCHNTPGSFTCRCQAGYAGDGFRCVPGESEKTRCQLERERLLGAAGALDPRGPRPVGMFVPQCDQQGNYLATQCHGGTGACWCVDRHGSEIAGTRTGPGMRPPCLSTVAPPVHAGPSVPPAVIPPPPGTHLLFAQTGKIERLPLEGNGMKKAEAKALLHIPEKVIVGLAFDCVDQVVYWTDISGPSIGRASLHGREPDTIIGQGLGSPEGLAVDHLGRNLFWTDSQLDRIEVAKLDGTLRRVLFESDLVNPRGIVADPVRGNLYWTDWNRESPKIETSYLDGTHRRVLVKDDLGLPNGLTFDPHTSLLCWVDAGTHWAECLNPAQPDRRRVLGGLQYPFAVTGFGKDLYYTDWKTNAVVVVDRHASKETDTFHPHKQTRLYGITTALAQCPQGHSYCSVNNGGCTHLCLATPGSRSCRCPDNTAPVNCIERK
SIO_010081: NID1
subclass of: SO_0000673
so part of: NID1
location: complement(join(1569037..1569158,1569941..1570053,1570830..1570953,1571099..1571256,1572263..1572434,1573052..1573178,1576056..1576229,1580196..1580423,1592328..1592450,1597868..1598017,1603216..1603344,1605831..1605974,1606734..1606982,1607068..1607268,1608289..1608540,1611577..1611726,1615918..1616312,1617718..1617947,1619565..1619864,1632636..1632818))
location: region:1569037-1632818:-1
so has part: feature:1632636-1632818:-1:exon
so has part: feature:1619565-1619864:-1:exon
so has part: feature:1617718-1617947:-1:exon
so has part: feature:1615918-1616312:-1:exon
so has part: feature:1611577-1611726:-1:exon
so has part: feature:1608289-1608540:-1:exon
so has part: feature:1607068-1607268:-1:exon
so has part: feature:1606734-1606982:-1:exon
so has part: feature:1605831-1605974:-1:exon
so has part: feature:1603216-1603344:-1:exon
so has part: feature:1597868-1598017:-1:exon
so has part: feature:1592328-1592450:-1:exon
so has part: feature:1580196-1580423:-1:exon
so has part: feature:1576056-1576229:-1:exon
so has part: feature:1573052-1573178:-1:exon
so has part: feature:1572263-1572434:-1:exon
so has part: feature:1571099-1571256:-1:exon
so has part: feature:1570830-1570953:-1:exon
so has part: feature:1569941-1570053:-1:exon
so has part: feature:1569037-1569158:-1:exon

XP_038617012.1
type: Protein
SIO_000068: ncbiprotein

position:1569037:-1
position: 1569037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632818:-1
position: 1632818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632636-1632818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619565-1619864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1617718-1617947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615918-1616312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1611577-1611726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1608289-1608540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1607068-1607268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1606734-1606982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1605831-1605974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1603216-1603344:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597868-1598017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1592328-1592450:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1580196-1580423:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1576056-1576229:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573052-1573178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1572263-1572434:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1571099-1571256:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1570830-1570953:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1569941-1570053:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1569037-1569158:-1:exon

GPR137B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GPR137B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1646009..1672656
location: region:1646009-1672656:1
so has part: feature:1646009-1672656:1:exon
subclass of: SO_0000010

119940979
type: Gene
SIO_000068: ncbigene

position:1646009:1
position: 1646009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672656:1
position: 1672656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646009-1672656:1:exon

GPR137B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GPR137B
product: G protein-coupled receptor 137B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038761399.1
SIO_010081: GPR137B
subclass of: SO_0000673
so part of: GPR137B
location: join(1646009..1646493,1661296..1661345,1663046..1663268,1664860..1665003,1666290..1666418,1670072..1670196,1671896..1672656)
location: region:1646009-1672656:1
so has part: feature:1646009-1646493:1:exon
so has part: feature:1661296-1661345:1:exon
so has part: feature:1663046-1663268:1:exon
so has part: feature:1664860-1665003:1:exon
so has part: feature:1666290-1666418:1:exon
so has part: feature:1670072-1670196:1:exon
so has part: feature:1671896-1672656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1646009-1646493:1:exon

position:1646493:1
position: 1646493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661296-1661345:1:exon

position:1661296:1
position: 1661296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661345:1
position: 1661345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1663046-1663268:1:exon

position:1663046:1
position: 1663046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663268:1
position: 1663268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1664860-1665003:1:exon

position:1664860:1
position: 1664860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665003:1
position: 1665003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1666290-1666418:1:exon

position:1666290:1
position: 1666290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666418:1
position: 1666418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1670072-1670196:1:exon

position:1670072:1
position: 1670072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670196:1
position: 1670196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1671896-1672656:1:exon

position:1671896:1
position: 1671896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR137B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GPR137B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integral membrane protein GPR137B
translation: MRTPVPPSAHGGHPPWQRLVEGIPLGNDSLSPTLSPAVPPYVKLGLTVVYTSFYSLLFVFVYTQLWLVLHHGHKRLSYQTVFLFLCLLWAALRTVLFSFYFRDFLTANRLGPFAFWLLYCCPVCLQFFTLTLMNLYFCQVIFKAKSKFSPELLKYRLALYLASLVVSLLFLLVNLTCAVLVRTGTWERKVVVSVRVAINDTLFVLCAVSLSVCLYKISKMSLANIYLESKGSSVCQVTAIGVTVILLYASRACYNLFTLSFSRHGSSFDYDWYNVSDQADLKSQLGDAGYVVFGVVLFVWELLPTSLVVYFFRVRNPIKDLSNPRGVPSHAFSPRSYFFDNPRRYDSDDNLAWNVAPQGFQGSFAPDYYDWGQPSSSFTGHIGSLQQDSDLDSGKPSHA
SIO_010081: GPR137B
subclass of: SO_0000673
so part of: GPR137B
location: join(1646077..1646493,1661296..1661345,1663046..1663268,1664860..1665003,1666290..1666418,1670072..1670196,1671896..1672007)
location: region:1646077-1672007:1
so has part: feature:1646077-1646493:1:exon
so has part: feature:1661296-1661345:1:exon
so has part: feature:1663046-1663268:1:exon
so has part: feature:1664860-1665003:1:exon
so has part: feature:1666290-1666418:1:exon
so has part: feature:1670072-1670196:1:exon
so has part: feature:1671896-1672007:1:exon

XP_038617327.1
type: Protein
SIO_000068: ncbiprotein

position:1646077:1
position: 1646077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672007:1
position: 1672007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646077-1646493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1661296-1661345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663046-1663268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1664860-1665003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1666290-1666418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1670072-1670196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1671896-1672007:1:exon

ERO1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ERO1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1678542..1720520)
location: region:1678542-1720520:-1
so has part: feature:1678542-1720520:-1:exon
subclass of: SO_0000010

119940715
type: Gene
SIO_000068: ncbigene

position:1678542:-1
position: 1678542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720520:-1
position: 1720520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678542-1720520:-1:exon

ERO1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ERO1B
product: endoplasmic reticulum oxidoreductase 1 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038760983.1
SIO_010081: ERO1B
subclass of: SO_0000673
so part of: ERO1B
location: complement(join(1678542..1680614,1681177..1681310,1686524..1686610,1688199..1688268,1692739..1692979,1693169..1693261,1695736..1695762,1697180..1697191,1697909..1697955,1698047..1698167,1701940..1702013,1703663..1703745,1704426..1704467,1705900..1705983,1710135..1710254,1720365..1720520))
location: region:1678542-1720520:-1
so has part: feature:1720365-1720520:-1:exon
so has part: feature:1710135-1710254:-1:exon
so has part: feature:1705900-1705983:-1:exon
so has part: feature:1704426-1704467:-1:exon
so has part: feature:1703663-1703745:-1:exon
so has part: feature:1701940-1702013:-1:exon
so has part: feature:1698047-1698167:-1:exon
so has part: feature:1697909-1697955:-1:exon
so has part: feature:1697180-1697191:-1:exon
so has part: feature:1695736-1695762:-1:exon
so has part: feature:1693169-1693261:-1:exon
so has part: feature:1692739-1692979:-1:exon
so has part: feature:1688199-1688268:-1:exon
so has part: feature:1686524-1686610:-1:exon
so has part: feature:1681177-1681310:-1:exon
so has part: feature:1678542-1680614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1720365-1720520:-1:exon

position:1720365:-1
position: 1720365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1710135-1710254:-1:exon

position:1710135:-1
position: 1710135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710254:-1
position: 1710254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1705983:-1:exon

position:1705900:-1
position: 1705900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705983:-1
position: 1705983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1704426-1704467:-1:exon

position:1704426:-1
position: 1704426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1704467:-1
position: 1704467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1703663-1703745:-1:exon

position:1703663:-1
position: 1703663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1703745:-1
position: 1703745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1701940-1702013:-1:exon

position:1701940:-1
position: 1701940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702013:-1
position: 1702013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1698047-1698167:-1:exon

position:1698047:-1
position: 1698047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698167:-1
position: 1698167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1697909-1697955:-1:exon

position:1697909:-1
position: 1697909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697955:-1
position: 1697955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1697180-1697191:-1:exon

position:1697180:-1
position: 1697180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697191:-1
position: 1697191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1695736-1695762:-1:exon

position:1695736:-1
position: 1695736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695762:-1
position: 1695762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1693169-1693261:-1:exon

position:1693169:-1
position: 1693169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693261:-1
position: 1693261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1692739-1692979:-1:exon

position:1692739:-1
position: 1692739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692979:-1
position: 1692979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1688199-1688268:-1:exon

position:1688199:-1
position: 1688199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688268:-1
position: 1688268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1686524-1686610:-1:exon

position:1686524:-1
position: 1686524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686610:-1
position: 1686610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1681177-1681310:-1:exon

position:1681177:-1
position: 1681177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681310:-1
position: 1681310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1678542-1680614:-1:exon

position:1680614:-1
position: 1680614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERO1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ERO1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERO1-like protein beta
translation: MGGTAGRPPRTLPVLLLAAAAALSCLGPAGEAQLAGVLDDCLCDIESIDSFNTYKIFPKMQRLQERDYFRYYKVNLKRPCPFWVDDGHCSIKDCHVEPCPESKVPVGIKAGSSNKYSKAANNTKEMEDCEQANKLGAVNSTLSNQSKEAFIDWARYDDSQDHFCELDDETSPSAQYVDLLLNPERYTGYKGSSAWRVWNSIYEENCFKPRSVYRPLNPLAPSRGKDDGESFYTWLEGLCLEKRVFYKLISGLHASINLHLCANYLLEETWGKPSWGPNVREFTRRFVDTQGEGPRRLKNLYFLYLIELRALSKVAPYFERSIVDLYTGNVEEDAQTKTLLLDIFQDTKSFPMHFDEKSMFAGEKKGAKSLKEEFRLHFKNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSEKEIQKLPENSPSKGFQLTRQEIVALLNAFGRLSTSIRELQNFKVLLQHSR
SIO_010081: ERO1B
subclass of: SO_0000673
so part of: ERO1B
location: complement(join(1680554..1680614,1681177..1681310,1686524..1686610,1688199..1688268,1692739..1692979,1693169..1693261,1695736..1695762,1697180..1697191,1697909..1697955,1698047..1698167,1701940..1702013,1703663..1703745,1704426..1704467,1705900..1705983,1710135..1710254,1720365..1720463))
location: region:1680554-1720463:-1
so has part: feature:1720365-1720463:-1:exon
so has part: feature:1710135-1710254:-1:exon
so has part: feature:1705900-1705983:-1:exon
so has part: feature:1704426-1704467:-1:exon
so has part: feature:1703663-1703745:-1:exon
so has part: feature:1701940-1702013:-1:exon
so has part: feature:1698047-1698167:-1:exon
so has part: feature:1697909-1697955:-1:exon
so has part: feature:1697180-1697191:-1:exon
so has part: feature:1695736-1695762:-1:exon
so has part: feature:1693169-1693261:-1:exon
so has part: feature:1692739-1692979:-1:exon
so has part: feature:1688199-1688268:-1:exon
so has part: feature:1686524-1686610:-1:exon
so has part: feature:1681177-1681310:-1:exon
so has part: feature:1680554-1680614:-1:exon

XP_038616911.1
type: Protein
SIO_000068: ncbiprotein

position:1680554:-1
position: 1680554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720463:-1
position: 1720463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720365-1720463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1710135-1710254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1705983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704426-1704467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1703663-1703745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701940-1702013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1698047-1698167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1697909-1697955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1697180-1697191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695736-1695762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1693169-1693261:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1692739-1692979:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1688199-1688268:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686524-1686610:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1681177-1681310:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1680554-1680614:-1:exon

EDARADD
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EDARADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1732712..1783142
location: region:1732712-1783142:1
so has part: feature:1732712-1783142:1:exon
subclass of: SO_0000010

119940983
type: Gene
SIO_000068: ncbigene

position:1732712:1
position: 1732712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783142:1
position: 1783142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732712-1783142:1:exon

EDARADD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EDARADD
product: EDAR associated death domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038761404.1
SIO_010081: EDARADD
subclass of: SO_0000673
so part of: EDARADD
location: join(1732712..1732793,1736983..1737051,1739970..1740028,1751543..1751582,1751759..1751813,1777028..1777187,1777311..1777488,1782394..1783142)
location: region:1732712-1783142:1
so has part: feature:1732712-1732793:1:exon
so has part: feature:1736983-1737051:1:exon
so has part: feature:1739970-1740028:1:exon
so has part: feature:1751543-1751582:1:exon
so has part: feature:1751759-1751813:1:exon
so has part: feature:1777028-1777187:1:exon
so has part: feature:1777311-1777488:1:exon
so has part: feature:1782394-1783142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1732712-1732793:1:exon

position:1732793:1
position: 1732793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1736983-1737051:1:exon

position:1736983:1
position: 1736983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737051:1
position: 1737051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1739970-1740028:1:exon

position:1739970:1
position: 1739970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740028:1
position: 1740028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1751543-1751582:1:exon

position:1751543:1
position: 1751543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751582:1
position: 1751582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1751759-1751813:1:exon

position:1751759:1
position: 1751759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751813:1
position: 1751813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1777028-1777187:1:exon

position:1777028:1
position: 1777028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777187:1
position: 1777187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1777311-1777488:1:exon

position:1777311:1
position: 1777311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777488:1
position: 1777488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1782394-1783142:1:exon

position:1782394:1
position: 1782394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDARADD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EDARADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectodysplasin-A receptor-associated adapter protein
translation: MHQNNACVKIRKLPKYQITGITDDVEADASSFRSRLTAIMEPPDDATLCPDPVAKEPVEDTDPSTLSFQMSDKYPVQDTELPKGPKLRFFRRRVLLRQSVTCEAQRLGLVRALDELSSGRSPGSSTERRSRSGKGTVTVRPRTETPAPGGDARDWKIALEKNFPREHLTEVSGNNRLFSWRLRGPPQFSKIVLTQEIHKMGALKFPDYISGGSREPRKDPSPGSPRVPRISDLLNDQDLLDVIRIKLDPCHPTVKNWRNFASKWGMGYDELCFLEQRPQSPTLEFLLRNSQRTVGQLVDLCRLYHRADVEKVLLRWVEDEWPKRLPF
SIO_010081: EDARADD
subclass of: SO_0000673
so part of: EDARADD
location: join(1732712..1732793,1736983..1737051,1739970..1740028,1751543..1751582,1751759..1751813,1777028..1777187,1777311..1777488,1782394..1782734)
location: region:1732712-1782734:1
so has part: feature:1732712-1732793:1:exon
so has part: feature:1736983-1737051:1:exon
so has part: feature:1739970-1740028:1:exon
so has part: feature:1751543-1751582:1:exon
so has part: feature:1751759-1751813:1:exon
so has part: feature:1777028-1777187:1:exon
so has part: feature:1777311-1777488:1:exon
so has part: feature:1782394-1782734:1:exon

XP_038617332.1
type: Protein
SIO_000068: ncbiprotein

position:1782734:1
position: 1782734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732712-1732793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1736983-1737051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1739970-1740028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1751543-1751582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1751759-1751813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777028-1777187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1777311-1777488:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782394-1782734:1:exon

LGALS8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LGALS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1792507..1804093
location: region:1792507-1804093:1
so has part: feature:1792507-1804093:1:exon
subclass of: SO_0000010

119940697
type: Gene
SIO_000068: ncbigene

position:1792507:1
position: 1792507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804093:1
position: 1804093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792507-1804093:1:exon

LGALS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LGALS8
product: galectin 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038760950.1
SIO_010081: LGALS8
subclass of: SO_0000673
so part of: LGALS8
location: join(1792507..1792547,1794479..1794563,1794931..1795019,1796011..1796221,1796989..1797108,1798782..1798808,1801364..1801452,1802340..1802508,1803420..1804093)
location: region:1792507-1804093:1
so has part: feature:1792507-1792547:1:exon
so has part: feature:1794479-1794563:1:exon
so has part: feature:1794931-1795019:1:exon
so has part: feature:1796011-1796221:1:exon
so has part: feature:1796989-1797108:1:exon
so has part: feature:1798782-1798808:1:exon
so has part: feature:1801364-1801452:1:exon
so has part: feature:1802340-1802508:1:exon
so has part: feature:1803420-1804093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792507-1792547:1:exon

position:1792547:1
position: 1792547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1794479-1794563:1:exon

position:1794479:1
position: 1794479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794563:1
position: 1794563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1794931-1795019:1:exon

position:1794931:1
position: 1794931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795019:1
position: 1795019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1796011-1796221:1:exon

position:1796011:1
position: 1796011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796221:1
position: 1796221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1796989-1797108:1:exon

position:1796989:1
position: 1796989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797108:1
position: 1797108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1798782-1798808:1:exon

position:1798782:1
position: 1798782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798808:1
position: 1798808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1801364-1801452:1:exon

position:1801364:1
position: 1801364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801452:1
position: 1801452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1802340-1802508:1:exon

position:1802340:1
position: 1802340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802508:1
position: 1802508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1803420-1804093:1:exon

position:1803420:1
position: 1803420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LGALS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LGALS8
product: galectin 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038760951.1
SIO_010081: LGALS8
subclass of: SO_0000673
so part of: LGALS8
location: join(1792507..1792547,1794479..1794563,1794931..1795019,1796011..1796221,1796989..1797108,1801364..1801452,1802340..1802508,1803420..1804093)
location: region:1792507-1804093:1
so has part: feature:1792507-1792547:1:exon
so has part: feature:1794479-1794563:1:exon
so has part: feature:1794931-1795019:1:exon
so has part: feature:1796011-1796221:1:exon
so has part: feature:1796989-1797108:1:exon
so has part: feature:1801364-1801452:1:exon
so has part: feature:1802340-1802508:1:exon
so has part: feature:1803420-1804093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792507-1792547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1794479-1794563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794931-1795019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796011-1796221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796989-1797108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1801364-1801452:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1802340-1802508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1803420-1804093:1:exon

LGALS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LGALS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galectin-8 isoform X1
translation: MMFSDSLENAVHNPVIPYVGTLAEELVPGLVMVVNGHVPDDADRFQIDFQCGSSVKPRADVAFHFNPRFRRPGRVVCNSLRGEKWGREEVTHRMPFEKGKPFRIVVMVLQDKFQVAVNGKHFLLYAHRMDPLLVDTVGISGKVHIQSFGFLPNPDARAATSPLVLPYNARLSSPLAPGRTVAIRGEVDKDPKGSFSVNLRVGGSRDIALHLNPRLKSSAFVRNSFLRDSWGEEEKSLPDFPFSPGMYFEMLIYCEAQQYKVAINGEHILEYKHRFTDLAKVDTVEVQGDVRLRDVTSW
SIO_010081: LGALS8
subclass of: SO_0000673
so part of: LGALS8
location: join(1794522..1794563,1794931..1795019,1796011..1796221,1796989..1797108,1798782..1798808,1801364..1801452,1802340..1802508,1803420..1803569)
location: region:1794522-1803569:1
so has part: feature:1794522-1794563:1:exon
so has part: feature:1794931-1795019:1:exon
so has part: feature:1796011-1796221:1:exon
so has part: feature:1796989-1797108:1:exon
so has part: feature:1798782-1798808:1:exon
so has part: feature:1801364-1801452:1:exon
so has part: feature:1802340-1802508:1:exon
so has part: feature:1803420-1803569:1:exon

XP_038616878.1
type: Protein
SIO_000068: ncbiprotein

position:1794522:1
position: 1794522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803569:1
position: 1803569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794522-1794563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1794931-1795019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796011-1796221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796989-1797108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798782-1798808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1801364-1801452:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1802340-1802508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1803420-1803569:1:exon

LGALS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LGALS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galectin-8 isoform X2
translation: MMFSDSLENAVHNPVIPYVGTLAEELVPGLVMVVNGHVPDDADRFQIDFQCGSSVKPRADVAFHFNPRFRRPGRVVCNSLRGEKWGREEVTHRMPFEKGKPFRIVVMVLQDKFQVAVNGKHFLLYAHRMDPLLVDTVGISGKVHIQSFGFLPNPVLPYNARLSSPLAPGRTVAIRGEVDKDPKGSFSVNLRVGGSRDIALHLNPRLKSSAFVRNSFLRDSWGEEEKSLPDFPFSPGMYFEMLIYCEAQQYKVAINGEHILEYKHRFTDLAKVDTVEVQGDVRLRDVTSW
SIO_010081: LGALS8
subclass of: SO_0000673
so part of: LGALS8
location: join(1794522..1794563,1794931..1795019,1796011..1796221,1796989..1797108,1801364..1801452,1802340..1802508,1803420..1803569)
location: region:1794522-1803569:1
so has part: feature:1794522-1794563:1:exon
so has part: feature:1794931-1795019:1:exon
so has part: feature:1796011-1796221:1:exon
so has part: feature:1796989-1797108:1:exon
so has part: feature:1801364-1801452:1:exon
so has part: feature:1802340-1802508:1:exon
so has part: feature:1803420-1803569:1:exon

XP_038616879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1794522-1794563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1794931-1795019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796011-1796221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796989-1797108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1801364-1801452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1802340-1802508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1803420-1803569:1:exon

HEATR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: HEATR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1803775..1884827)
location: region:1803775-1884827:-1
so has part: feature:1803775-1884827:-1:exon
subclass of: SO_0000010

119940698
type: Gene
SIO_000068: ncbigene

position:1803775:-1
position: 1803775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884827:-1
position: 1884827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803775-1884827:-1:exon

HEATR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: HEATR1
product: HEAT repeat containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038760952.1
SIO_010081: HEATR1
subclass of: SO_0000673
so part of: HEATR1
location: complement(join(1803775..1805023,1805641..1805749,1805827..1805985,1808438..1808592,1808684..1808852,1810313..1810417,1810590..1810724,1813294..1813452,1813598..1813748,1815581..1815876,1815992..1816132,1819036..1819159,1819457..1819503,1821453..1821613,1823571..1823700,1823829..1824059,1826714..1826842,1830308..1830429,1830531..1830649,1833365..1833508,1835119..1835222,1838047..1838178,1838286..1838528,1839810..1839974,1843539..1843711,1845648..1845840,1847762..1847898,1849272..1849455,1849631..1849825,1851630..1851751,1853538..1853749,1854084..1854172,1856515..1856610,1860253..1860360,1860474..1860594,1861687..1861797,1866111..1866213,1868421..1868554,1871800..1872011,1873941..1874081,1878093..1878194,1878549..1878690,1880234..1880450,1880791..1880945,1884748..1884827))
location: region:1803775-1884827:-1
so has part: feature:1884748-1884827:-1:exon
so has part: feature:1880791-1880945:-1:exon
so has part: feature:1880234-1880450:-1:exon
so has part: feature:1878549-1878690:-1:exon
so has part: feature:1878093-1878194:-1:exon
so has part: feature:1873941-1874081:-1:exon
so has part: feature:1871800-1872011:-1:exon
so has part: feature:1868421-1868554:-1:exon
so has part: feature:1866111-1866213:-1:exon
so has part: feature:1861687-1861797:-1:exon
so has part: feature:1860474-1860594:-1:exon
so has part: feature:1860253-1860360:-1:exon
so has part: feature:1856515-1856610:-1:exon
so has part: feature:1854084-1854172:-1:exon
so has part: feature:1853538-1853749:-1:exon
so has part: feature:1851630-1851751:-1:exon
so has part: feature:1849631-1849825:-1:exon
so has part: feature:1849272-1849455:-1:exon
so has part: feature:1847762-1847898:-1:exon
so has part: feature:1845648-1845840:-1:exon
so has part: feature:1843539-1843711:-1:exon
so has part: feature:1839810-1839974:-1:exon
so has part: feature:1838286-1838528:-1:exon
so has part: feature:1838047-1838178:-1:exon
so has part: feature:1835119-1835222:-1:exon
so has part: feature:1833365-1833508:-1:exon
so has part: feature:1830531-1830649:-1:exon
so has part: feature:1830308-1830429:-1:exon
so has part: feature:1826714-1826842:-1:exon
so has part: feature:1823829-1824059:-1:exon
so has part: feature:1823571-1823700:-1:exon
so has part: feature:1821453-1821613:-1:exon
so has part: feature:1819457-1819503:-1:exon
so has part: feature:1819036-1819159:-1:exon
so has part: feature:1815992-1816132:-1:exon
so has part: feature:1815581-1815876:-1:exon
so has part: feature:1813598-1813748:-1:exon
so has part: feature:1813294-1813452:-1:exon
so has part: feature:1810590-1810724:-1:exon
so has part: feature:1810313-1810417:-1:exon
so has part: feature:1808684-1808852:-1:exon
so has part: feature:1808438-1808592:-1:exon
so has part: feature:1805827-1805985:-1:exon
so has part: feature:1805641-1805749:-1:exon
so has part: feature:1803775-1805023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1884748-1884827:-1:exon

position:1884748:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:1880791-1880945:-1:exon

position:1880791:-1
position: 1880791
reference: sequence
type: ReverseStrandPosition
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position:1880945:-1
position: 1880945
reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1880234-1880450:-1:exon

position:1880234:-1
position: 1880234
reference: sequence
type: ReverseStrandPosition
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position:1880450:-1
position: 1880450
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1878549-1878690:-1:exon

position:1878549:-1
position: 1878549
reference: sequence
type: ReverseStrandPosition
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position:1878690:-1
position: 1878690
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urn:…
SIO_000300: 5
SIO_000628: feature:1878093-1878194:-1:exon

position:1878093:-1
position: 1878093
reference: sequence
type: ReverseStrandPosition
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position:1878194:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1873941-1874081:-1:exon

position:1873941:-1
position: 1873941
reference: sequence
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position:1874081:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:1871800-1872011:-1:exon

position:1871800:-1
position: 1871800
reference: sequence
type: ReverseStrandPosition
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position:1872011:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:1868421-1868554:-1:exon

position:1868421:-1
position: 1868421
reference: sequence
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position:1868554:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:1866111-1866213:-1:exon

position:1866111:-1
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reference: sequence
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