Tachyglossus aculeatus isolate mTacAcu1 chromosome 6, mTacAcu1.pri, whole genome shotgun sequence.
type: Entry
definition: Tachyglossus aculeatus isolate mTacAcu1 chromosome 6, mTacAcu1.pri, whole genome shotgun sequence.
sequence version: NC_052071.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052071.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA687514
dblink: SAMN12634963
keyword: WGS
keyword: RefSeq
source: Tachyglossus aculeatus (Australian echidna)
organism: Tachyglossus aculeatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027604.1.\nAssembly name: mTacAcu1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/09. The original whole-genome shotgun project has the\naccession JADRJE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-OCT-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n pbgcpp v. 1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-09-17; Manual Curation\n v. 2020-10-26; VGP assembly pipeline v.\n 1.6\nAssembly Name :: mTacAcu1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.29x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Bionano Genomics DLS; Phase Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tachyglossus aculeatus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 61686051
topology: linear
so has quality: SO_0000987
location: 1..61686051
location: region:1-61686051:1
RO_0002162: 9261

NC_052071
type: RefSeq
SIO_000068: refseq

PRJNA687514
type: BioProject
SIO_000068: bioproject

SAMN12634963
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61686051:1
position: 61686051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-61686051:1:source
so part of: sequence
organism: Tachyglossus aculeatus
mol type: genomic DNA
isolate: mTacAcu1
chromosome: 6
sex: male
tissue type: liver
dev stage: adult
country: Australia: Upper Barnard River, New South Wales
lat lon: 31.647305 S 151.500011 E
collected by: Tasman Daish, Frank Grutzner

9261
type: Taxonomy
SIO_000068: taxonomy

LOC119929981
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(49432..50316)
location: region:49432-50316:-1
so has part: feature:49432-50316:-1:exon

119929981
type: Gene
SIO_000068: ncbigene

position:49432:-1
position: 49432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50316:-1
position: 50316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49432-50316:-1:exon

LOC119929981
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119929981
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119929981
subclass of: SO_0000673
so part of: LOC119929981
location: complement(49432..50316)
location: region:49432-50316:-1
so has part: feature:49432-50316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49432-50316:-1:exon

LOC119929488
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 68192..69109
location: region:68192-69109:1
so has part: feature:68192-69109:1:exon
subclass of: SO_0000010

119929488
type: Gene
SIO_000068: ncbigene

position:68192:1
position: 68192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69109:1
position: 69109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68192-69109:1:exon

LOC119929488
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929488
product: putative olfactory receptor 14L1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_038747638.1
SIO_010081: LOC119929488
subclass of: SO_0000673
so part of: LOC119929488
location: 68192..69109
location: region:68192-69109:1
so has part: feature:68192-69109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68192-69109:1:exon

LOC119929488
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative olfactory receptor 14L1
translation: MSNCTAVREFFLLGFSEARELQLVQAALFFLVYLAALTGNLLIVTITALDQRLHTPMYFFLRNLSVLDFCYISVTVPKYIFNSFTHNGSISFLGCITQVFFFMSLASAEVAFLTAMSYDRYVAICLPLRYEIIMSRQACGKMAAASWLSGGVSGLMHTAATFSVPFCGPSTIHQFFCDVPQLLALSDPSVIIIEVWVTIAVVSLAFLCLASIVVSYVHIFWAVLRMPVSEGRAKAFSTCLPHLAVVTFFVSTGGFAYLNPKGSPVLDLLLSVFYAVVPPAVNPLIYSLRNKDMKSALWKILGGKL
SIO_010081: LOC119929488
subclass of: SO_0000673
so part of: LOC119929488
location: 68192..69109
location: region:68192-69109:1
so has part: feature:68192-69109:1:exon

XP_038603566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68192-69109:1:exon

LOC119929982
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(237619..239060)
location: region:237619-239060:-1
so has part: feature:237619-239060:-1:exon

119929982
type: Gene
SIO_000068: ncbigene

position:237619:-1
position: 237619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239060:-1
position: 239060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237619-239060:-1:exon

LOC119929982
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119929982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119929982
subclass of: SO_0000673
so part of: LOC119929982
location: complement(237619..237725)
location: region:237619-237725:-1
so has part: feature:237619-237725:-1:exon

position:237725:-1
position: 237725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237619-237725:-1:exon

LOC119929982
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119929982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119929982
subclass of: SO_0000673
so part of: LOC119929982
location: complement(238065..239060)
location: region:238065-239060:-1
so has part: feature:238065-239060:-1:exon

position:238065:-1
position: 238065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238065-239060:-1:exon

LOC119929459
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252606..255438
location: region:252606-255438:1
so has part: feature:252606-255438:1:exon
subclass of: SO_0000011

119929459
type: Gene
SIO_000068: ncbigene

position:252606:1
position: 252606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255438:1
position: 255438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252606-255438:1:exon

LOC119929459
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119929459
product: uncharacterized LOC119929459
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005451555.1
SIO_010081: LOC119929459
subclass of: SO_0000673
so part of: LOC119929459
location: join(252606..252646,253743..253800,255371..255438)
location: region:252606-255438:1
so has part: feature:252606-252646:1:exon
so has part: feature:253743-253800:1:exon
so has part: feature:255371-255438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252606-252646:1:exon

position:252646:1
position: 252646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253743-253800:1:exon

position:253743:1
position: 253743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253800:1
position: 253800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255371-255438:1:exon

position:255371:1
position: 255371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119929983
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264781..271008)
location: region:264781-271008:-1
so has part: feature:264781-271008:-1:exon
subclass of: SO_0000010

119929983
type: Gene
SIO_000068: ncbigene

position:264781:-1
position: 264781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271008:-1
position: 271008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264781-271008:-1:exon

LOC119929983
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929983
product: AT-rich interactive domain-containing protein 4B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748379.1
SIO_010081: LOC119929983
subclass of: SO_0000673
so part of: LOC119929983
location: complement(join(264781..264880,270251..271008))
location: region:264781-271008:-1
so has part: feature:270251-271008:-1:exon
so has part: feature:264781-264880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270251-271008:-1:exon

position:270251:-1
position: 270251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264781-264880:-1:exon

position:264880:-1
position: 264880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119929983
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B-like
translation: MKALDEPPYLTVGTDVSTKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTAEVQDDHIKGPLKVGTAVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPWKDVQEISSDAAPKPDAVLKLALSTEPPERAGSQVQVQIERGGGGPERAVGAGVSDQER
SIO_010081: LOC119929983
subclass of: SO_0000673
so part of: LOC119929983
location: complement(join(264781..264880,270251..271008))
location: region:264781-271008:-1
so has part: feature:270251-271008:-1:exon
so has part: feature:264781-264880:-1:exon

XP_038604307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270251-271008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264781-264880:-1:exon

LOC119930177
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930177
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1970822..1970959
location: region:1970822-1970959:1
so has part: feature:1970822-1970959:1:exon
subclass of: SO_0000578

119930177
type: Gene
SIO_000068: ncbigene

position:1970822:1
position: 1970822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970959:1
position: 1970959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1970822-1970959:1:exon

LOC119930177
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119930177
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005451665.1
SIO_010081: LOC119930177
subclass of: SO_0000673
so part of: LOC119930177
location: 1970822..1970959
location: region:1970822-1970959:1
so has part: feature:1970822-1970959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1970822-1970959:1:exon

LOC119929984
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2075028..2080434
location: region:2075028-2080434:1
so has part: feature:2075028-2080434:1:exon
subclass of: SO_0000010

119929984
type: Gene
SIO_000068: ncbigene

position:2075028:1
position: 2075028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080434:1
position: 2080434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075028-2080434:1:exon

LOC119929984
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929984
product: olfactory receptor 14A16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038748380.1
SIO_010081: LOC119929984
subclass of: SO_0000673
so part of: LOC119929984
location: join(2075028..2075981,2078250..2078372,2080264..2080434)
location: region:2075028-2080434:1
so has part: feature:2075028-2075981:1:exon
so has part: feature:2078250-2078372:1:exon
so has part: feature:2080264-2080434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2075028-2075981:1:exon

position:2075981:1
position: 2075981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2078250-2078372:1:exon

position:2078250:1
position: 2078250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078372:1
position: 2078372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2080264-2080434:1:exon

position:2080264:1
position: 2080264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119929984
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14A16-like
translation: MPNVSTVREFLLLELSDIRELQLVYSALFLLVYLGALTGNLLIVAVTALDRRLHTPMYFFLRNLSIVDLCYISVTVPKSAVISLTDRRAISLLGCAAQVFLVVVLATSELAVLTAMSYDRYAAICHPLDYELIMNNTACGKMAAASWLIGVMVGVLYSASTFSLSFCGSNIIQQFFCDIPSLLKISCSEDHVIIDVSITGGVVLVVICFVCIVVSYVSIFLAVLRKPAAESRTKAFSTCLPHLTVVIVFLLTGAVAYLKPVSESTSTLDLLVSMSYTMMPPTLNPVIYSLRNRDMKAALGRVLKGRFLLPPLRDKMFVHPHPGYQGNHQPGSDTTTEHRHDAAVTSVVSGSRMSKTFSANFFFDVPSLLKITCFEDHSTINVSVTFALIMAAVSSISIVASYVRIFWDILRMLAA
SIO_010081: LOC119929984
subclass of: SO_0000673
so part of: LOC119929984
location: join(2075028..2075981,2078250..2078372,2080264..2080434)
location: region:2075028-2080434:1
so has part: feature:2075028-2075981:1:exon
so has part: feature:2078250-2078372:1:exon
so has part: feature:2080264-2080434:1:exon

XP_038604308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2075028-2075981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2078250-2078372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2080264-2080434:1:exon

LOC119930324
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930324
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2149861..2149998
location: region:2149861-2149998:1
so has part: feature:2149861-2149998:1:exon
subclass of: SO_0000578

119930324
type: Gene
SIO_000068: ncbigene

position:2149861:1
position: 2149861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149998:1
position: 2149998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149861-2149998:1:exon

LOC119930324
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119930324
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005451802.1
SIO_010081: LOC119930324
subclass of: SO_0000673
so part of: LOC119930324
location: 2149861..2149998
location: region:2149861-2149998:1
so has part: feature:2149861-2149998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2149861-2149998:1:exon

LOC119929641
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2158321..2159249
location: region:2158321-2159249:1
so has part: feature:2158321-2159249:1:exon

119929641
type: Gene
SIO_000068: ncbigene

position:2158321:1
position: 2158321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159249:1
position: 2159249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2158321-2159249:1:exon

LOC119929641
type: Exon
subclass of: SO_0000147
RO_0002162: 9261
gene: LOC119929641
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119929641
subclass of: SO_0000673
so part of: LOC119929641
location: 2158321..2159249
location: region:2158321-2159249:1
so has part: feature:2158321-2159249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2158321-2159249:1:exon

LOC119930261
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930261
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2178165..2178302)
location: region:2178165-2178302:-1
so has part: feature:2178165-2178302:-1:exon
subclass of: SO_0000578

119930261
type: Gene
SIO_000068: ncbigene

position:2178165:-1
position: 2178165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2178302:-1
position: 2178302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2178165-2178302:-1:exon

LOC119930261
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119930261
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005451743.1
SIO_010081: LOC119930261
subclass of: SO_0000673
so part of: LOC119930261
location: complement(2178165..2178302)
location: region:2178165-2178302:-1
so has part: feature:2178165-2178302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2178165-2178302:-1:exon

LOC119930275
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930275
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2270528..2270664)
location: region:2270528-2270664:-1
so has part: feature:2270528-2270664:-1:exon
subclass of: SO_0000578

119930275
type: Gene
SIO_000068: ncbigene

position:2270528:-1
position: 2270528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270664:-1
position: 2270664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2270528-2270664:-1:exon

LOC119930275
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: snoRNA
gene: LOC119930275
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005451757.1
SIO_010081: LOC119930275
subclass of: SO_0000673
so part of: LOC119930275
location: complement(2270528..2270664)
location: region:2270528-2270664:-1
so has part: feature:2270528-2270664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2270528-2270664:-1:exon

LOC119930128
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2368964..2421297
location: region:2368964-2421297:1
so has part: feature:2368964-2421297:1:exon
subclass of: SO_0000010

119930128
type: Gene
SIO_000068: ncbigene

position:2368964:1
position: 2368964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421297:1
position: 2421297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368964-2421297:1:exon

LOC119930128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119930128
product: ligand of Numb protein X 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748628.1
SIO_010081: LOC119930128
subclass of: SO_0000673
so part of: LOC119930128
location: join(2368964..2369024,2400547..2400961,2403452..2403672,2405732..2405994,2406358..2406714,2409528..2409710,2410206..2410380,2412418..2412643,2417260..2417418,2419943..2421297)
location: region:2368964-2421297:1
so has part: feature:2368964-2369024:1:exon
so has part: feature:2400547-2400961:1:exon
so has part: feature:2403452-2403672:1:exon
so has part: feature:2405732-2405994:1:exon
so has part: feature:2406358-2406714:1:exon
so has part: feature:2409528-2409710:1:exon
so has part: feature:2410206-2410380:1:exon
so has part: feature:2412418-2412643:1:exon
so has part: feature:2417260-2417418:1:exon
so has part: feature:2419943-2421297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2368964-2369024:1:exon

position:2369024:1
position: 2369024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2400547-2400961:1:exon

position:2400547:1
position: 2400547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400961:1
position: 2400961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2403452-2403672:1:exon

position:2403452:1
position: 2403452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403672:1
position: 2403672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2405732-2405994:1:exon

position:2405732:1
position: 2405732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405994:1
position: 2405994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2406358-2406714:1:exon

position:2406358:1
position: 2406358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2406714:1
position: 2406714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2409528-2409710:1:exon

position:2409528:1
position: 2409528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409710:1
position: 2409710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2410206-2410380:1:exon

position:2410206:1
position: 2410206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410380:1
position: 2410380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2412418-2412643:1:exon

position:2412418:1
position: 2412418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412643:1
position: 2412643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2417260-2417418:1:exon

position:2417260:1
position: 2417260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417418:1
position: 2417418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2419943-2421297:1:exon

position:2419943:1
position: 2419943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119930128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119930128
product: ligand of Numb protein X 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748629.1
SIO_010081: LOC119930128
subclass of: SO_0000673
so part of: LOC119930128
location: join(2368964..2369024,2400547..2400961,2403452..2403672,2405798..2405994,2406358..2406714,2409528..2409710,2410206..2410380,2412418..2412643,2417260..2417418,2419943..2421297)
location: region:2368964-2421297:1
so has part: feature:2368964-2369024:1:exon
so has part: feature:2400547-2400961:1:exon
so has part: feature:2403452-2403672:1:exon
so has part: feature:2405798-2405994:1:exon
so has part: feature:2406358-2406714:1:exon
so has part: feature:2409528-2409710:1:exon
so has part: feature:2410206-2410380:1:exon
so has part: feature:2412418-2412643:1:exon
so has part: feature:2417260-2417418:1:exon
so has part: feature:2419943-2421297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2368964-2369024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2400547-2400961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403452-2403672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405798-2405994:1:exon

position:2405798:1
position: 2405798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2406358-2406714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2409528-2409710:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2410206-2410380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2412418-2412643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2417260-2417418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2419943-2421297:1:exon

LOC119930128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119930128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2-like isoform X1
translation: MLDSTTQPAGAPAGGELCHECGQQHHLPNNHLYNFQDEVDDELLCHICLQPLLQPVDTPCGHTYCFCCLEGFLQEASFCPMDRKKLSLQHCRRSSLLVRNLLDKLIVLCPFQPDCPLAMQRCQLEGHLQNRCPGFRKYRAELGRKKGPLGRSQEEPLPGEEAGAPGEQTPGAVPPVVESPLAAAVSLGLPEPGLVNPAYEESEEVSGDGVAGGEDHEGSLSFLLPADGPPRASLVAETVAVELRRLDPEEELGLRIVGGRDTPLGNIVVQEVRRDSLAALDGRVAPGDHVLEVNGVTIGNVTHEQAIGLLRQPGPTLRLVVLQEKGFSPKAPAQDAGREVIRVTLVKRDQMEPLGIKLIRKGEEAGIFILDLLDGGLAAKNGQLSRNDQVLAINGQDLRQGTPEAAAHIIQTSENRVHFVVLRQKTPSLQEAGEDGGMLGSGSSSSSGGGSPVHPRRRPEQTHYLRPATYQKEPPAGFVSQERILTIKKEPRESLGITIGGGRDSKHKLPVFVTSVQPVGCLSRDGRVRRGSVLLSINGVDLTQLSYYEAVSALKHHTASTSVMLKVLDILVPERGPENGEVVPEAAREPGHGWAPLWVTWLGLPSCLHCCQDIVLRKSDAESWGFSIVGGFEEAKGSQPFFIKTIVPGTPAFRDKRLRCGDEIVAVNGLPAVRMANSELIPMLKEQKNRVTLTVVSWPGSLV
SIO_010081: LOC119930128
subclass of: SO_0000673
so part of: LOC119930128
location: join(2400570..2400961,2403452..2403672,2405732..2405994,2406358..2406714,2409528..2409710,2410206..2410380,2412418..2412643,2417260..2417418,2419943..2420078)
location: region:2400570-2420078:1
so has part: feature:2400570-2400961:1:exon
so has part: feature:2403452-2403672:1:exon
so has part: feature:2405732-2405994:1:exon
so has part: feature:2406358-2406714:1:exon
so has part: feature:2409528-2409710:1:exon
so has part: feature:2410206-2410380:1:exon
so has part: feature:2412418-2412643:1:exon
so has part: feature:2417260-2417418:1:exon
so has part: feature:2419943-2420078:1:exon

XP_038604556.1
type: Protein
SIO_000068: ncbiprotein

position:2400570:1
position: 2400570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420078:1
position: 2420078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2400570-2400961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403452-2403672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405732-2405994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2406358-2406714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2409528-2409710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2410206-2410380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412418-2412643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2417260-2417418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2419943-2420078:1:exon

LOC119930128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119930128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2-like isoform X2
translation: MLDSTTQPAGAPAGGELCHECGQQHHLPNNHLYNFQDEVDDELLCHICLQPLLQPVDTPCGHTYCFCCLEGFLQEASFCPMDRKKLSLQHCRRSSLLVRNLLDKLIVLCPFQPDCPLAMQRCQLEGHLQNRCPGFRKYRAELGRKKGPLGRSQEEPLPGEEAGAPGEQTPGAVPPVVESPLAAAVSLGLPEPGLVNPAYEESEEDGPPRASLVAETVAVELRRLDPEEELGLRIVGGRDTPLGNIVVQEVRRDSLAALDGRVAPGDHVLEVNGVTIGNVTHEQAIGLLRQPGPTLRLVVLQEKGFSPKAPAQDAGREVIRVTLVKRDQMEPLGIKLIRKGEEAGIFILDLLDGGLAAKNGQLSRNDQVLAINGQDLRQGTPEAAAHIIQTSENRVHFVVLRQKTPSLQEAGEDGGMLGSGSSSSSGGGSPVHPRRRPEQTHYLRPATYQKEPPAGFVSQERILTIKKEPRESLGITIGGGRDSKHKLPVFVTSVQPVGCLSRDGRVRRGSVLLSINGVDLTQLSYYEAVSALKHHTASTSVMLKVLDILVPERGPENGEVVPEAAREPGHGWAPLWVTWLGLPSCLHCCQDIVLRKSDAESWGFSIVGGFEEAKGSQPFFIKTIVPGTPAFRDKRLRCGDEIVAVNGLPAVRMANSELIPMLKEQKNRVTLTVVSWPGSLV
SIO_010081: LOC119930128
subclass of: SO_0000673
so part of: LOC119930128
location: join(2400570..2400961,2403452..2403672,2405798..2405994,2406358..2406714,2409528..2409710,2410206..2410380,2412418..2412643,2417260..2417418,2419943..2420078)
location: region:2400570-2420078:1
so has part: feature:2400570-2400961:1:exon
so has part: feature:2403452-2403672:1:exon
so has part: feature:2405798-2405994:1:exon
so has part: feature:2406358-2406714:1:exon
so has part: feature:2409528-2409710:1:exon
so has part: feature:2410206-2410380:1:exon
so has part: feature:2412418-2412643:1:exon
so has part: feature:2417260-2417418:1:exon
so has part: feature:2419943-2420078:1:exon

XP_038604557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2400570-2400961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403452-2403672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405798-2405994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2406358-2406714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2409528-2409710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2410206-2410380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412418-2412643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2417260-2417418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2419943-2420078:1:exon

LOC119930078
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2428557..2471150)
location: region:2428557-2471150:-1
so has part: feature:2428557-2471150:-1:exon
subclass of: SO_0000010

119930078
type: Gene
SIO_000068: ncbigene

position:2428557:-1
position: 2428557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2471150:-1
position: 2471150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428557-2471150:-1:exon

LOC119930078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119930078
product: pre-mRNA 3'-end-processing factor FIP1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038748528.1
SIO_010081: LOC119930078
subclass of: SO_0000673
so part of: LOC119930078
location: complement(join(2428557..2429644,2433120..2433278,2435972..2436119,2439601..2439656,2441050..2441107,2443133..2443159,2445809..2446016,2448218..2448323,2453903..2454027,2454695..2454825,2456749..2456859,2457817..2457875,2458577..2458680,2463725..2463806,2469588..2469627,2470927..2471150))
location: region:2428557-2471150:-1
so has part: feature:2470927-2471150:-1:exon
so has part: feature:2469588-2469627:-1:exon
so has part: feature:2463725-2463806:-1:exon
so has part: feature:2458577-2458680:-1:exon
so has part: feature:2457817-2457875:-1:exon
so has part: feature:2456749-2456859:-1:exon
so has part: feature:2454695-2454825:-1:exon
so has part: feature:2453903-2454027:-1:exon
so has part: feature:2448218-2448323:-1:exon
so has part: feature:2445809-2446016:-1:exon
so has part: feature:2443133-2443159:-1:exon
so has part: feature:2441050-2441107:-1:exon
so has part: feature:2439601-2439656:-1:exon
so has part: feature:2435972-2436119:-1:exon
so has part: feature:2433120-2433278:-1:exon
so has part: feature:2428557-2429644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2470927-2471150:-1:exon

position:2470927:-1
position: 2470927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2469588-2469627:-1:exon

position:2469588:-1
position: 2469588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469627:-1
position: 2469627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2463725-2463806:-1:exon

position:2463725:-1
position: 2463725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463806:-1
position: 2463806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2458577-2458680:-1:exon

position:2458577:-1
position: 2458577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458680:-1
position: 2458680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2457817-2457875:-1:exon

position:2457817:-1
position: 2457817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457875:-1
position: 2457875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2456749-2456859:-1:exon

position:2456749:-1
position: 2456749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456859:-1
position: 2456859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2454695-2454825:-1:exon

position:2454695:-1
position: 2454695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2454825:-1
position: 2454825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2453903-2454027:-1:exon

position:2453903:-1
position: 2453903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2454027:-1
position: 2454027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2448218-2448323:-1:exon

position:2448218:-1
position: 2448218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2448323:-1
position: 2448323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2445809-2446016:-1:exon

position:2445809:-1
position: 2445809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2446016:-1
position: 2446016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2443133-2443159:-1:exon

position:2443133:-1
position: 2443133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2443159:-1
position: 2443159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2441050-2441107:-1:exon

position:2441050:-1
position: 2441050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441107:-1
position: 2441107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2439601-2439656:-1:exon

position:2439601:-1
position: 2439601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439656:-1
position: 2439656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2435972-2436119:-1:exon

position:2435972:-1
position: 2435972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2436119:-1
position: 2436119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2433120-2433278:-1:exon

position:2433120:-1
position: 2433120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2433278:-1
position: 2433278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2428557-2429644:-1:exon

position:2429644:-1
position: 2429644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119930078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119930078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3'-end-processing factor FIP1-like
translation: MATELEAAGPGANAAGRLEAEEDEEHWLYGDDTSGKLDHRLLSGHVDTSLPLHDAGRENRGGGEDGDPAQHVAPSGGEDEDDDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKMGRGYGAATSAKLQPKGIDLDALGNINGFPVVEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPSPPISTENKITVQQGRTGNADKEPENIIIKTEFKTDFVALVGGRVKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGEHGSKPQPSPQPQPQPAQPQQPPQQQPFVPPAAGPPPPPLAGPPPPHFLHPPPPSVPSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPSSYNNRQPPPFGYSSAAESGFISYPPISATHTPWVTTLDKGSGVSGGGHWSRRERDRTPTTSEYNNDDERYRYYSRERSYDLDREYRRSRDRSREREERHRERRHREKEEGSKHKSSRRKQHENDEGEGHRRHKHKKNKRSKEDKEASEDGVPEGGEPDAKD
SIO_010081: LOC119930078
subclass of: SO_0000673
so part of: LOC119930078
location: complement(join(2429512..2429644,2433120..2433278,2435972..2436119,2439601..2439656,2441050..2441107,2443133..2443159,2445809..2446016,2448218..2448323,2453903..2454027,2454695..2454825,2456749..2456859,2457817..2457875,2458577..2458680,2463725..2463806,2469588..2469627,2470927..2471017))
location: region:2429512-2471017:-1
so has part: feature:2470927-2471017:-1:exon
so has part: feature:2469588-2469627:-1:exon
so has part: feature:2463725-2463806:-1:exon
so has part: feature:2458577-2458680:-1:exon
so has part: feature:2457817-2457875:-1:exon
so has part: feature:2456749-2456859:-1:exon
so has part: feature:2454695-2454825:-1:exon
so has part: feature:2453903-2454027:-1:exon
so has part: feature:2448218-2448323:-1:exon
so has part: feature:2445809-2446016:-1:exon
so has part: feature:2443133-2443159:-1:exon
so has part: feature:2441050-2441107:-1:exon
so has part: feature:2439601-2439656:-1:exon
so has part: feature:2435972-2436119:-1:exon
so has part: feature:2433120-2433278:-1:exon
so has part: feature:2429512-2429644:-1:exon

XP_038604456.1
type: Protein
SIO_000068: ncbiprotein

position:2429512:-1
position: 2429512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2471017:-1
position: 2471017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470927-2471017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2469588-2469627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2463725-2463806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2458577-2458680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2457817-2457875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456749-2456859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2454695-2454825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2453903-2454027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2448218-2448323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2445809-2446016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2443133-2443159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2441050-2441107:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2439601-2439656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435972-2436119:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2433120-2433278:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2429512-2429644:-1:exon

CHIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2499539..2545236)
location: region:2499539-2545236:-1
so has part: feature:2499539-2545236:-1:exon
subclass of: SO_0000010

119929705
type: Gene
SIO_000068: ncbigene

position:2499539:-1
position: 2499539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545236:-1
position: 2545236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2499539-2545236:-1:exon

CHIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHIC1
product: cysteine rich hydrophobic domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038747936.1
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: complement(join(2499539..2502190,2503825..2503881,2514823..2514978,2533632..2533686,2544977..2545236))
location: region:2499539-2545236:-1
so has part: feature:2544977-2545236:-1:exon
so has part: feature:2533632-2533686:-1:exon
so has part: feature:2514823-2514978:-1:exon
so has part: feature:2503825-2503881:-1:exon
so has part: feature:2499539-2502190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2544977-2545236:-1:exon

position:2544977:-1
position: 2544977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2533632-2533686:-1:exon

position:2533632:-1
position: 2533632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2533686:-1
position: 2533686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2514823-2514978:-1:exon

position:2514823:-1
position: 2514823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514978:-1
position: 2514978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2503825-2503881:-1:exon

position:2503825:-1
position: 2503825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503881:-1
position: 2503881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2499539-2502190:-1:exon

position:2502190:-1
position: 2502190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CHIC1
product: cysteine rich hydrophobic domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038747935.1
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: complement(join(2499539..2502190,2503467..2503526,2503825..2503881,2514823..2514978,2533632..2533686,2544977..2545236))
location: region:2499539-2545236:-1
so has part: feature:2544977-2545236:-1:exon
so has part: feature:2533632-2533686:-1:exon
so has part: feature:2514823-2514978:-1:exon
so has part: feature:2503825-2503881:-1:exon
so has part: feature:2503467-2503526:-1:exon
so has part: feature:2499539-2502190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2544977-2545236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533632-2533686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514823-2514978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2503825-2503881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2503467-2503526:-1:exon

position:2503467:-1
position: 2503467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503526:-1
position: 2503526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2499539-2502190:-1:exon

CHIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich hydrophobic domain-containing protein 1 isoform X2
translation: MSVLLPNMAEFDTISELEEDGAAAAVAVPEEEEEEEEAVDEEEEDEDDEEEEEEEEPPPPPRVVSEEHLRRYAPDPVSVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLKKNLPINVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLLEWENNRLYHKVILIEFLPKYPILRPD
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: complement(join(2502140..2502190,2503825..2503881,2514823..2514978,2533632..2533686,2544977..2545236))
location: region:2502140-2545236:-1
so has part: feature:2544977-2545236:-1:exon
so has part: feature:2533632-2533686:-1:exon
so has part: feature:2514823-2514978:-1:exon
so has part: feature:2503825-2503881:-1:exon
so has part: feature:2502140-2502190:-1:exon

XP_038603864.1
type: Protein
SIO_000068: ncbiprotein

position:2502140:-1
position: 2502140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2544977-2545236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533632-2533686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514823-2514978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2503825-2503881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2502140-2502190:-1:exon

CHIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich hydrophobic domain-containing protein 1 isoform X1
translation: MSVLLPNMAEFDTISELEEDGAAAAVAVPEEEEEEEEAVDEEEEDEDDEEEEEEEEPPPPPRVVSEEHLRRYAPDPVSVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLKKNLPINVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLLEWENNRLYHKLGLHWKLSKRKCESSNMMEYVILIEFLPKYPILRPD
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: complement(join(2502140..2502190,2503467..2503526,2503825..2503881,2514823..2514978,2533632..2533686,2544977..2545236))
location: region:2502140-2545236:-1
so has part: feature:2544977-2545236:-1:exon
so has part: feature:2533632-2533686:-1:exon
so has part: feature:2514823-2514978:-1:exon
so has part: feature:2503825-2503881:-1:exon
so has part: feature:2503467-2503526:-1:exon
so has part: feature:2502140-2502190:-1:exon

XP_038603863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2544977-2545236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533632-2533686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514823-2514978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2503825-2503881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2503467-2503526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2502140-2502190:-1:exon

LOC119929956
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2567164..2584313)
location: region:2567164-2584313:-1
so has part: feature:2567164-2584313:-1:exon
subclass of: SO_0000010

119929956
type: Gene
SIO_000068: ncbigene

position:2567164:-1
position: 2567164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584313:-1
position: 2584313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567164-2584313:-1:exon

LOC119929956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929956
product: homeobox protein CDX-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038748342.1
SIO_010081: LOC119929956
subclass of: SO_0000673
so part of: LOC119929956
location: complement(join(2567164..2568102,2575221..2575366,2583695..2584313))
location: region:2567164-2584313:-1
so has part: feature:2583695-2584313:-1:exon
so has part: feature:2575221-2575366:-1:exon
so has part: feature:2567164-2568102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2583695-2584313:-1:exon

position:2583695:-1
position: 2583695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2575221-2575366:-1:exon

position:2575221:-1
position: 2575221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575366:-1
position: 2575366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2567164-2568102:-1:exon

position:2568102:-1
position: 2568102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119929956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-4-like
translation: MFGSCLVDQDPAMYPGSLRAGGGGSGGPLPGQTFAPGPSYADYMGYPSGPGLDGPGQPPAGWGSPYGAPREDWGVYGAGPSLASGAPGPPPPPAPPAPAPPPPPPPPPPPGPGPYGSPDYGALSGPGPGGLPPVDAAGADPLPPAGQRHTAYEWMRRTVQSAAGTGKTRTREKYRVVYTDHQRLELEKEFRCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKMIKKKISQFDGSGGSAQSDSGSVSPAELPSSLFPPPHAIRELQPIEVHQVIISE
SIO_010081: LOC119929956
subclass of: SO_0000673
so part of: LOC119929956
location: complement(join(2567896..2568102,2575221..2575366,2583695..2584190))
location: region:2567896-2584190:-1
so has part: feature:2583695-2584190:-1:exon
so has part: feature:2575221-2575366:-1:exon
so has part: feature:2567896-2568102:-1:exon

XP_038604270.1
type: Protein
SIO_000068: ncbiprotein

position:2567896:-1
position: 2567896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584190:-1
position: 2584190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2583695-2584190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575221-2575366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2567896-2568102:-1:exon

LOC119929990
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2602607..2639042)
location: region:2602607-2639042:-1
so has part: feature:2602607-2639042:-1:exon
subclass of: SO_0000010

119929990
type: Gene
SIO_000068: ncbigene

position:2602607:-1
position: 2602607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639042:-1
position: 2639042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602607-2639042:-1:exon

LOC119929990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929990
product: homeobox protein CDX-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_038748393.1
SIO_010081: LOC119929990
subclass of: SO_0000673
so part of: LOC119929990
location: complement(join(2602607..2602850,2602924..2603162,2617712..2617857,2638550..2639042))
location: region:2602607-2639042:-1
so has part: feature:2638550-2639042:-1:exon
so has part: feature:2617712-2617857:-1:exon
so has part: feature:2602924-2603162:-1:exon
so has part: feature:2602607-2602850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2638550-2639042:-1:exon

position:2638550:-1
position: 2638550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2617712-2617857:-1:exon

position:2617712:-1
position: 2617712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617857:-1
position: 2617857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2602924-2603162:-1:exon

position:2602924:-1
position: 2602924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2603162:-1
position: 2603162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2602607-2602850:-1:exon

position:2602850:-1
position: 2602850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119929990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-4-like
translation: MFGSCLVDQDPPMYPGSLRGGGGGGGGPLPGQSFAPGPPYADYMGYPSGPGLDGPGQPPAGWGSPYGAPREDWGVYGAGPSLPPGAPGPPPPPAPPAPAPAPPAPPPPPGPGPYGSPDYGALSGPGPGGLPPVDAAGADPLPPAGQRHTAYEWMRRTVQSAAGTGKTRTREKYRVVYTDRQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKERKLMKKKMTHFDGSLGTIQSDSGSVSPVPGSDPVTCSDLSGALFPPPPPPPPPQPPTPTLALNGLSMQSFPPGCGCHRAWTPPLGGGRAGCPEGGPDPFRLQGVQPGPKLFEDLEILRVFIVSLPPPRPTPKPLPKIVRAFANLVQSD
SIO_010081: LOC119929990
subclass of: SO_0000673
so part of: LOC119929990
location: complement(join(2602607..2602850,2602924..2603162,2617712..2617857,2638550..2639042))
location: region:2602607-2639042:-1
so has part: feature:2638550-2639042:-1:exon
so has part: feature:2617712-2617857:-1:exon
so has part: feature:2602924-2603162:-1:exon
so has part: feature:2602607-2602850:-1:exon

XP_038604321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2638550-2639042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2617712-2617857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2602924-2603162:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2602607-2602850:-1:exon

LOC119929662
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2684912..2907697)
location: region:2684912-2907697:-1
so has part: feature:2684912-2907697:-1:exon
subclass of: SO_0000010

119929662
type: Gene
SIO_000068: ncbigene

position:2684912:-1
position: 2684912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907697:-1
position: 2907697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684912-2907697:-1:exon

LOC119929662
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929662
product: vascular endothelial growth factor receptor kdr-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038747850.1
SIO_010081: LOC119929662
subclass of: SO_0000673
so part of: LOC119929662
location: complement(join(2684912..2689787,2693732..2693832,2696062..2696128,2699131..2699240,2701473..2701578,2704633..2704732,2717273..2717384,2717495..2717617,2718211..2718308,2718484..2718649,2720830..2720918,2726552..2726665,2727915..2728019,2729064..2729199,2733153..2733259,2735511..2735636,2737886..2738032,2738409..2738702,2740989..2741097,2757292..2757412,2766185..2766335,2783517..2783692,2785389..2785506,2786352..2786517,2796364..2796500,2799576..2799744,2805563..2805690,2841286..2841506,2846591..2846687,2907631..2907697))
location: region:2684912-2907697:-1
so has part: feature:2907631-2907697:-1:exon
so has part: feature:2846591-2846687:-1:exon
so has part: feature:2841286-2841506:-1:exon
so has part: feature:2805563-2805690:-1:exon
so has part: feature:2799576-2799744:-1:exon
so has part: feature:2796364-2796500:-1:exon
so has part: feature:2786352-2786517:-1:exon
so has part: feature:2785389-2785506:-1:exon
so has part: feature:2783517-2783692:-1:exon
so has part: feature:2766185-2766335:-1:exon
so has part: feature:2757292-2757412:-1:exon
so has part: feature:2740989-2741097:-1:exon
so has part: feature:2738409-2738702:-1:exon
so has part: feature:2737886-2738032:-1:exon
so has part: feature:2735511-2735636:-1:exon
so has part: feature:2733153-2733259:-1:exon
so has part: feature:2729064-2729199:-1:exon
so has part: feature:2727915-2728019:-1:exon
so has part: feature:2726552-2726665:-1:exon
so has part: feature:2720830-2720918:-1:exon
so has part: feature:2718484-2718649:-1:exon
so has part: feature:2718211-2718308:-1:exon
so has part: feature:2717495-2717617:-1:exon
so has part: feature:2717273-2717384:-1:exon
so has part: feature:2704633-2704732:-1:exon
so has part: feature:2701473-2701578:-1:exon
so has part: feature:2699131-2699240:-1:exon
so has part: feature:2696062-2696128:-1:exon
so has part: feature:2693732-2693832:-1:exon
so has part: feature:2684912-2689787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2907631-2907697:-1:exon

position:2907631:-1
position: 2907631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2846591-2846687:-1:exon

position:2846591:-1
position: 2846591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846687:-1
position: 2846687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2841286-2841506:-1:exon

position:2841286:-1
position: 2841286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841506:-1
position: 2841506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2805563-2805690:-1:exon

position:2805563:-1
position: 2805563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805690:-1
position: 2805690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2799576-2799744:-1:exon

position:2799576:-1
position: 2799576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2799744:-1
position: 2799744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2796364-2796500:-1:exon

position:2796364:-1
position: 2796364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2796500:-1
position: 2796500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2786352-2786517:-1:exon

position:2786352:-1
position: 2786352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786517:-1
position: 2786517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2785389-2785506:-1:exon

position:2785389:-1
position: 2785389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785506:-1
position: 2785506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2783517-2783692:-1:exon

position:2783517:-1
position: 2783517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783692:-1
position: 2783692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2766185-2766335:-1:exon

position:2766185:-1
position: 2766185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766335:-1
position: 2766335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2757292-2757412:-1:exon

position:2757292:-1
position: 2757292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757412:-1
position: 2757412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2740989-2741097:-1:exon

position:2740989:-1
position: 2740989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741097:-1
position: 2741097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2738409-2738702:-1:exon

position:2738409:-1
position: 2738409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738702:-1
position: 2738702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2737886-2738032:-1:exon

position:2737886:-1
position: 2737886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738032:-1
position: 2738032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2735511-2735636:-1:exon

position:2735511:-1
position: 2735511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735636:-1
position: 2735636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2733153-2733259:-1:exon

position:2733153:-1
position: 2733153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733259:-1
position: 2733259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2729064-2729199:-1:exon

position:2729064:-1
position: 2729064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729199:-1
position: 2729199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2727915-2728019:-1:exon

position:2727915:-1
position: 2727915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728019:-1
position: 2728019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2726552-2726665:-1:exon

position:2726552:-1
position: 2726552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726665:-1
position: 2726665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2720830-2720918:-1:exon

position:2720830:-1
position: 2720830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720918:-1
position: 2720918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2718484-2718649:-1:exon

position:2718484:-1
position: 2718484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718649:-1
position: 2718649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2718211-2718308:-1:exon

position:2718211:-1
position: 2718211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718308:-1
position: 2718308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2717495-2717617:-1:exon

position:2717495:-1
position: 2717495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717617:-1
position: 2717617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2717273-2717384:-1:exon

position:2717273:-1
position: 2717273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717384:-1
position: 2717384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2704633-2704732:-1:exon

position:2704633:-1
position: 2704633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704732:-1
position: 2704732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2701473-2701578:-1:exon

position:2701473:-1
position: 2701473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701578:-1
position: 2701578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2699131-2699240:-1:exon

position:2699131:-1
position: 2699131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699240:-1
position: 2699240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2696062-2696128:-1:exon

position:2696062:-1
position: 2696062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2696128:-1
position: 2696128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2693732-2693832:-1:exon

position:2693732:-1
position: 2693732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2693832:-1
position: 2693832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2684912-2689787:-1:exon

position:2689787:-1
position: 2689787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119929662
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor receptor kdr-like
translation: MGPEPALLALAAGLLQGLLGLPGLADEDFLMKPELSFSGEQVVIEAGTTFDVTCRGSAPLAWLWGGNSSLRRVRRQERPCPDDPRVTCSQLTVFRMAANDTGYFTCAYQNDADANDPDLRATVYVFVQDPSQPFVQPHSDVPLVINILPSTQEVVVPCRVSSPDLQVDLDLFLPSPSYKFTSFSKDWDPKKGFTVTRPSYQFFSNMLQCITKAGGKTFRTLYLPQKVETEKKNLVISANHQKMLVGALLRLRCAAETTYNGRIDFKWEYKKKRAECCEVKKNMKTDDPVYKSSSTLTIRNVTMEDNGLYTCRENNASGLEANITITVYERAFIKVLPTNNSTMEGTAGQKMLKLVVRVTAFPHPSVAWFKDGRPVEENITCYQSDPVRYKLTIRDVKLKYAGLYTVVLSNPQYGLSENHSIQLVINERPKIYEKETDLNEMEPVLLGSEHTLRCTASGVPAPSISWSWEPCLPDDPLCRRRSKRVSISGHSLTTGPYLANTIKSVVETTLFHEERNKTLSTLIIASSNVSGVYFCVASNKVGGDERGMKFFVSDVPEQLETEPQVSAIAGHDAVLRCRAARFIFDHLVWLDPSGAVFPATSTRNQSDSYSISLALVIHNASLEHEGKYSCRARHRHNATLEQEQSTQLQIKERVAPYVLETLASLTVNSSGKIVLECKVGGTPAPGITWTKNGYPVLPASGIFLENHTLVIERAKKDDEGTYECQATNEVGRASTSAVITVEGSEERSNIEVIILVCTGLAATLFWLLLTLFIRKLRKPSVSDIKTGYLSIIMDPEEVPLDEQCERLPYDSSRWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKSSTCKTVAVKMLKECATANECKALMSELKILIHIGHHLNVVNLLGACTKSGGPLMVIVEFCKYGNLSNYLRGKRGDFIAFKSQEGSEPGEKSLEDSSSDLTELIKRRLESVASTGSSASSGFIEDKSYSDSEEEEEDSEDLYKRLLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEDFCRRLKEGTRMRSPEYSTPEIYQTMLDCWRGPCTERPNFTELVERLGDLLQASVQQEGKEYIPLNITDGGLNPKSHPLEETNRGNRWSALETGSKKRPLSVKTFDEVPVEQEKSEESGSDSGMVLTSDEIKSLKRLEIRSWPHGIMALALRAVSKSKESVLSESSREGLKFQPTAALLEAGGPLDFALEDSALLSLDPALECHSPPPDYNSVVHYSAPPV
SIO_010081: LOC119929662
subclass of: SO_0000673
so part of: LOC119929662
location: complement(join(2689571..2689787,2693732..2693832,2696062..2696128,2699131..2699240,2701473..2701578,2704633..2704732,2717273..2717384,2717495..2717617,2718211..2718308,2718484..2718649,2720830..2720918,2726552..2726665,2727915..2728019,2729064..2729199,2733153..2733259,2735511..2735636,2737886..2738032,2738409..2738702,2740989..2741097,2757292..2757412,2766185..2766335,2783517..2783692,2785389..2785506,2786352..2786517,2796364..2796500,2799576..2799744,2805563..2805690,2841286..2841506,2846591..2846687,2907631..2907697))
location: region:2689571-2907697:-1
so has part: feature:2907631-2907697:-1:exon
so has part: feature:2846591-2846687:-1:exon
so has part: feature:2841286-2841506:-1:exon
so has part: feature:2805563-2805690:-1:exon
so has part: feature:2799576-2799744:-1:exon
so has part: feature:2796364-2796500:-1:exon
so has part: feature:2786352-2786517:-1:exon
so has part: feature:2785389-2785506:-1:exon
so has part: feature:2783517-2783692:-1:exon
so has part: feature:2766185-2766335:-1:exon
so has part: feature:2757292-2757412:-1:exon
so has part: feature:2740989-2741097:-1:exon
so has part: feature:2738409-2738702:-1:exon
so has part: feature:2737886-2738032:-1:exon
so has part: feature:2735511-2735636:-1:exon
so has part: feature:2733153-2733259:-1:exon
so has part: feature:2729064-2729199:-1:exon
so has part: feature:2727915-2728019:-1:exon
so has part: feature:2726552-2726665:-1:exon
so has part: feature:2720830-2720918:-1:exon
so has part: feature:2718484-2718649:-1:exon
so has part: feature:2718211-2718308:-1:exon
so has part: feature:2717495-2717617:-1:exon
so has part: feature:2717273-2717384:-1:exon
so has part: feature:2704633-2704732:-1:exon
so has part: feature:2701473-2701578:-1:exon
so has part: feature:2699131-2699240:-1:exon
so has part: feature:2696062-2696128:-1:exon
so has part: feature:2693732-2693832:-1:exon
so has part: feature:2689571-2689787:-1:exon

XP_038603778.1
type: Protein
SIO_000068: ncbiprotein

position:2689571:-1
position: 2689571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907631-2907697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2846591-2846687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841286-2841506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2805563-2805690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2799576-2799744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2796364-2796500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2786352-2786517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2785389-2785506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783517-2783692:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2766185-2766335:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757292-2757412:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2740989-2741097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2738409-2738702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2737886-2738032:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2735511-2735636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2733153-2733259:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2729064-2729199:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727915-2728019:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2726552-2726665:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2720830-2720918:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2718484-2718649:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2718211-2718308:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2717495-2717617:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2717273-2717384:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2704633-2704732:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2701473-2701578:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699131-2699240:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2696062-2696128:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2693732-2693832:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2689571-2689787:-1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2928232..2928303)
location: region:2928232-2928303:-1
so has part: feature:2928232-2928303:-1:exon
subclass of: SO_0000663

119930361
type: Gene
SIO_000068: ncbigene

position:2928232:-1
position: 2928232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928303:-1
position: 2928303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2928232-2928303:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9261
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2928269..2928271),aa:Ala, seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(2928232..2928303)
location: region:2928232-2928303:-1
so has part: feature:2928232-2928303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2928232-2928303:-1:exon

ARHGEF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ARHGEF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2988692..3122635)
location: region:2988692-3122635:-1
so has part: feature:2988692-3122635:-1:exon
subclass of: SO_0000010

119929628
type: Gene
SIO_000068: ncbigene

position:2988692:-1
position: 2988692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122635:-1
position: 3122635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2988692-3122635:-1:exon

ARHGEF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARHGEF9
product: Cdc42 guanine nucleotide exchange factor 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038747803.1
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2988692..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040993,3122567..3122635))
location: region:2988692-3122635:-1
so has part: feature:3122567-3122635:-1:exon
so has part: feature:3040814-3040993:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2988692-2990043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3122567-3122635:-1:exon

position:3122567:-1
position: 3122567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040814-3040993:-1:exon

position:3040814:-1
position: 3040814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040993:-1
position: 3040993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3024680-3024871:-1:exon

position:3024680:-1
position: 3024680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024871:-1
position: 3024871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3016062-3016241:-1:exon

position:3016062:-1
position: 3016062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016241:-1
position: 3016241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3011867-3012099:-1:exon

position:3011867:-1
position: 3011867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012099:-1
position: 3012099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3007500-3007629:-1:exon

position:3007500:-1
position: 3007500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007629:-1
position: 3007629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2999856-2999987:-1:exon

position:2999856:-1
position: 2999856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2999987:-1
position: 2999987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2998150-2998393:-1:exon

position:2998150:-1
position: 2998150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998393:-1
position: 2998393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2997404-2997472:-1:exon

position:2997404:-1
position: 2997404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997472:-1
position: 2997472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2988692-2990043:-1:exon

position:2990043:-1
position: 2990043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARHGEF9
product: Cdc42 guanine nucleotide exchange factor 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038747805.1
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2988692..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040993,3084124..3084307))
location: region:2988692-3084307:-1
so has part: feature:3084124-3084307:-1:exon
so has part: feature:3040814-3040993:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2988692-2990043:-1:exon

position:3084307:-1
position: 3084307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084124-3084307:-1:exon

position:3084124:-1
position: 3084124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040814-3040993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024680-3024871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016062-3016241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3011867-3012099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3007500-3007629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2999856-2999987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2998150-2998393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2997404-2997472:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2988692-2990043:-1:exon

ARHGEF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ARHGEF9
product: Cdc42 guanine nucleotide exchange factor 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038747804.1
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2988692..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040993,3084113..3084307))
location: region:2988692-3084307:-1
so has part: feature:3084113-3084307:-1:exon
so has part: feature:3040814-3040993:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2988692-2990043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3084113-3084307:-1:exon

position:3084113:-1
position: 3084113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040814-3040993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024680-3024871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016062-3016241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3011867-3012099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3007500-3007629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2999856-2999987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2998150-2998393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2997404-2997472:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2988692-2990043:-1:exon

ARHGEF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARHGEF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 9 isoform X2
translation: MTLLISAGSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDGVEEGTSEVQNGHLDPGSDCLCLGRTLQNRDQMRANVINEIMSTERHYIKHLKDICDGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNEDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKEGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMSWIFQPYGRNQQRVFFLFDHQMVLCKKDMIRRDILYYKGRIDMDKYEVVEIEDGRDDDFNVSLKNAFKLHNKETEEVHLFFAKKLEEKLRWLRAFREERKMVQEDEKIGFEISENQKRQAAMTVRKVSKQKGVSCSRSVPPGYPPPQDPLNQGQYLMPDGLNQSQVFEFAEPKRSQSPFWQNFSRLTPFKK
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2989862..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040993,3084113..3084121))
location: region:2989862-3084121:-1
so has part: feature:3084113-3084121:-1:exon
so has part: feature:3040814-3040993:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2989862-2990043:-1:exon

XP_038603732.1
type: Protein
SIO_000068: ncbiprotein

position:2989862:-1
position: 2989862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084121:-1
position: 3084121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084113-3084121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040814-3040993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024680-3024871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016062-3016241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3011867-3012099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3007500-3007629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2999856-2999987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2998150-2998393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2997404-2997472:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2989862-2990043:-1:exon

ARHGEF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARHGEF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 9 isoform X1
translation: MANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDGVEEGTSEVQNGHLDPGSDCLCLGRTLQNRDQMRANVINEIMSTERHYIKHLKDICDGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNEDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKEGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMSWIFQPYGRNQQRVFFLFDHQMVLCKKDMIRRDILYYKGRIDMDKYEVVEIEDGRDDDFNVSLKNAFKLHNKETEEVHLFFAKKLEEKLRWLRAFREERKMVQEDEKIGFEISENQKRQAAMTVRKVSKQKGVSCSRSVPPGYPPPQDPLNQGQYLMPDGLNQSQVFEFAEPKRSQSPFWQNFSRLTPFKK
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2989862..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040939))
location: region:2989862-3040939:-1
so has part: feature:3040814-3040939:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2989862-2990043:-1:exon

XP_038603731.1
type: Protein
SIO_000068: ncbiprotein

position:3040939:-1
position: 3040939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3040814-3040939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024680-3024871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3016062-3016241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3011867-3012099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3007500-3007629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999856-2999987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2998150-2998393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2997404-2997472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2989862-2990043:-1:exon

ARHGEF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ARHGEF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 9 isoform X1
translation: MANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDGVEEGTSEVQNGHLDPGSDCLCLGRTLQNRDQMRANVINEIMSTERHYIKHLKDICDGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNEDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKEGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMSWIFQPYGRNQQRVFFLFDHQMVLCKKDMIRRDILYYKGRIDMDKYEVVEIEDGRDDDFNVSLKNAFKLHNKETEEVHLFFAKKLEEKLRWLRAFREERKMVQEDEKIGFEISENQKRQAAMTVRKVSKQKGVSCSRSVPPGYPPPQDPLNQGQYLMPDGLNQSQVFEFAEPKRSQSPFWQNFSRLTPFKK
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: complement(join(2989862..2990043,2997404..2997472,2998150..2998393,2999856..2999987,3007500..3007629,3011867..3012099,3016062..3016241,3024680..3024871,3040814..3040939))
location: region:2989862-3040939:-1
so has part: feature:3040814-3040939:-1:exon
so has part: feature:3024680-3024871:-1:exon
so has part: feature:3016062-3016241:-1:exon
so has part: feature:3011867-3012099:-1:exon
so has part: feature:3007500-3007629:-1:exon
so has part: feature:2999856-2999987:-1:exon
so has part: feature:2998150-2998393:-1:exon
so has part: feature:2997404-2997472:-1:exon
so has part: feature:2989862-2990043:-1:exon

XP_038603733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3040814-3040939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024680-3024871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3016062-3016241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3011867-3012099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3007500-3007629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999856-2999987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2998150-2998393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2997404-2997472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2989862-2990043:-1:exon

AMER1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AMER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3204310..3211448)
location: region:3204310-3211448:-1
so has part: feature:3204310-3211448:-1:exon
subclass of: SO_0000010

119929995
type: Gene
SIO_000068: ncbigene

position:3204310:-1
position: 3204310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211448:-1
position: 3211448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204310-3211448:-1:exon

AMER1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AMER1
product: APC membrane recruitment protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748400.1
SIO_010081: AMER1
subclass of: SO_0000673
so part of: AMER1
location: complement(join(3204310..3206886,3211347..3211448))
location: region:3204310-3211448:-1
so has part: feature:3211347-3211448:-1:exon
so has part: feature:3204310-3206886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3211347-3211448:-1:exon

position:3211347:-1
position: 3211347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3204310-3206886:-1:exon

position:3206886:-1
position: 3206886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMER1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AMER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 1
translation: METVSGSRVEGTKPSEAAGGEPSSRVPEAAGEGAGAEPAPAPGPGKLRKTALKLFGGKRGICTLPSLFGGGRSRGPGKGAARKGQSRTHDGLGQVAGGSDPPGEARPPPGSQSAQGALGPGPAPGGPEAAGGERLPPPQRPRRGLKGLLSSIRLHKKSRAAAPGTPREAQAGPSGSATPPTSGGSDASGDRGPGKSEPAAAAEGTGPAGPGGPSPARAAEADPAGPAAADREEGPGAGEPAPGPSGDQLSLLFGDVTSLKSFDSLTGCGDVTAEQDEDSLAESTVSGERGPGREAAKRSSCLVTYQGGGEEMASPDGMEEAERPAEGGGRPAWESPAPARGESPPGDRCPQPRSPPPPGDLLSPQSDQPESAPNSDEGYYDSMTPGPEEEPGPARRDRLPRDSYSGDALYEFFDPEEEDLGASPAGDEGLFEAFGDFGPWPLGKGTARAVVETEEERLAALQRQLLYWELRQDGLRGRGEQEPGGPPGPGWSAPTPGRGGREALGQGRGAVGTERGPEGPGETEAELAVSFSQALVAFGGGGGGGGTLFSSLSGSSASDSSFTQNLPALPAMVTFDIVDVEREGEGECEDAHEHLAASLETFDACFSPPKEVGLGSVGRPGWALASGPFGGFPWGVGSLPRHLGLPGLSPPPPPAPTALGRRSRSLDTESLDLELAGRHPAGGCSGAGEGGDGLFFGPRAPGWPCSLPRSRPAAPPRAGVDAPPSRGRPPGGPLARSEPRAPGYAVRPCDLPLAGPAKPGQEAQRTRAERGTRAPGQQRGPGGCLPKSLGAGQGHRTMEA
SIO_010081: AMER1
subclass of: SO_0000673
so part of: AMER1
location: complement(3204386..3206788)
location: region:3204386-3206788:-1
so has part: feature:3204386-3206788:-1:exon

XP_038604328.1
type: Protein
SIO_000068: ncbiprotein

position:3204386:-1
position: 3204386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3206788:-1
position: 3206788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204386-3206788:-1:exon

ASB12
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ASB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3223741..3230565)
location: region:3223741-3230565:-1
so has part: feature:3223741-3230565:-1:exon
subclass of: SO_0000010

119929963
type: Gene
SIO_000068: ncbigene

position:3223741:-1
position: 3223741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230565:-1
position: 3230565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3223741-3230565:-1:exon

ASB12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ASB12
product: ankyrin repeat and SOCS box containing 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038748351.1
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223741..3224140,3229332..3230187,3230500..3230565))
location: region:3223741-3230565:-1
so has part: feature:3230500-3230565:-1:exon
so has part: feature:3229332-3230187:-1:exon
so has part: feature:3223741-3224140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3230500-3230565:-1:exon

position:3230500:-1
position: 3230500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3229332-3230187:-1:exon

position:3229332:-1
position: 3229332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230187:-1
position: 3230187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3223741-3224140:-1:exon

position:3224140:-1
position: 3224140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ASB12
product: ankyrin repeat and SOCS box containing 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038748352.1
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223741..3224140,3229332..3230187,3230447..3230531))
location: region:3223741-3230531:-1
so has part: feature:3230447-3230531:-1:exon
so has part: feature:3229332-3230187:-1:exon
so has part: feature:3223741-3224140:-1:exon

position:3230531:-1
position: 3230531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230447-3230531:-1:exon

position:3230447:-1
position: 3230447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3229332-3230187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3223741-3224140:-1:exon

ASB12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ASB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 12 isoform X1
translation: MRVISLRSPKRSHMDVSKMFSLLRLEEEEEEEEVGEGAAAGAKQELSRAVGADDHGALDLLLRQARYKRFINSRSGWGVPGTPLRLAAARGHLRCLRVLLAHGAEVDRLDAKAQTPLFTAVSHGHAACARLLLEAGASPLGSPYNNCSPVLTAARDGRGAILQALLAHGADANVRARVPAWAPGPAACTGPLYLAAAYGHLDCFRLLLLHGADPDYNCTDPRLLARVARPRTLLELCLRRGCGPDYVRLLVDFGANVYLPPLPPGGPPADGEAVALLCRERGPTEAGPLLSPQLIPSLCCPRRGWRSAEPCPWPAGPKSSTGWNSRRGWPTTSSTSPRPGSGSRRPHPPADPRALVFLQK
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223902..3224140,3229332..3230175))
location: region:3223902-3230175:-1
so has part: feature:3229332-3230175:-1:exon
so has part: feature:3223902-3224140:-1:exon

XP_038604279.1
type: Protein
SIO_000068: ncbiprotein

position:3223902:-1
position: 3223902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230175:-1
position: 3230175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3229332-3230175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223902-3224140:-1:exon

ASB12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ASB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 12 isoform X1
translation: MRVISLRSPKRSHMDVSKMFSLLRLEEEEEEEEVGEGAAAGAKQELSRAVGADDHGALDLLLRQARYKRFINSRSGWGVPGTPLRLAAARGHLRCLRVLLAHGAEVDRLDAKAQTPLFTAVSHGHAACARLLLEAGASPLGSPYNNCSPVLTAARDGRGAILQALLAHGADANVRARVPAWAPGPAACTGPLYLAAAYGHLDCFRLLLLHGADPDYNCTDPRLLARVARPRTLLELCLRRGCGPDYVRLLVDFGANVYLPPLPPGGPPADGEAVALLCRERGPTEAGPLLSPQLIPSLCCPRRGWRSAEPCPWPAGPKSSTGWNSRRGWPTTSSTSPRPGSGSRRPHPPADPRALVFLQK
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223902..3224140,3229332..3230175))
location: region:3223902-3230175:-1
so has part: feature:3229332-3230175:-1:exon
so has part: feature:3223902-3224140:-1:exon

XP_038604280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3229332-3230175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223902-3224140:-1:exon

ASB12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ASB12
product: ankyrin repeat and SOCS box containing 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748353.1
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223906..3224105,3229332..3230187,3230500..3230565))
location: region:3223906-3230565:-1
so has part: feature:3230500-3230565:-1:exon
so has part: feature:3229332-3230187:-1:exon
so has part: feature:3223906-3224105:-1:exon

position:3223906:-1
position: 3223906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230500-3230565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3229332-3230187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3223906-3224105:-1:exon

position:3224105:-1
position: 3224105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ASB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 12 isoform X2
translation: MRVISLRSPKRSHMDVSKMFSLLRLEEEEEEEEVGEGAAAGAKQELSRAVGADDHGALDLLLRQARYKRFINSRSGWGVPGTPLRLAAARGHLRCLRVLLAHGAEVDRLDAKAQTPLFTAVSHGHAACARLLLEAGASPLGSPYNNCSPVLTAARDGRGAILQALLAHGADANVRARVPAWAPGPAACTGPLYLAAAYGHLDCFRLLLLHGADPDYNCTDPRLLARVARPRTLLELCLRRGCGPDYVRLLVDFGANVYLPPLPPGGPPADGEAVALLCRERAHPKPLLSQARLAVRRALPLAGRAQVVDRLELPPRLADYLKHQS
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: complement(join(3223972..3224105,3229332..3230175))
location: region:3223972-3230175:-1
so has part: feature:3229332-3230175:-1:exon
so has part: feature:3223972-3224105:-1:exon

XP_038604281.1
type: Protein
SIO_000068: ncbiprotein

position:3223972:-1
position: 3223972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3229332-3230175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223972-3224105:-1:exon

MTMR8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MTMR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3238141..3288358)
location: region:3238141-3288358:-1
so has part: feature:3238141-3288358:-1:exon
subclass of: SO_0000010

119929651
type: Gene
SIO_000068: ncbigene

position:3238141:-1
position: 3238141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288358:-1
position: 3288358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3238141-3288358:-1:exon

MTMR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR8
product: myotubularin related protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038747838.1
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3238141..3242526,3246380..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271110,3273482..3273644,3277591..3277713,3288320..3288358))
location: region:3238141-3288358:-1
so has part: feature:3288320-3288358:-1:exon
so has part: feature:3277591-3277713:-1:exon
so has part: feature:3273482-3273644:-1:exon
so has part: feature:3270953-3271110:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246380-3246506:-1:exon
so has part: feature:3238141-3242526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3288320-3288358:-1:exon

position:3288320:-1
position: 3288320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3277591-3277713:-1:exon

position:3277591:-1
position: 3277591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277713:-1
position: 3277713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3273482-3273644:-1:exon

position:3273482:-1
position: 3273482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273644:-1
position: 3273644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3270953-3271110:-1:exon

position:3270953:-1
position: 3270953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271110:-1
position: 3271110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3268586-3268714:-1:exon

position:3268586:-1
position: 3268586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268714:-1
position: 3268714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3262985-3263119:-1:exon

position:3262985:-1
position: 3262985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263119:-1
position: 3263119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3260766-3260898:-1:exon

position:3260766:-1
position: 3260766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260898:-1
position: 3260898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3258119-3258228:-1:exon

position:3258119:-1
position: 3258119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258228:-1
position: 3258228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3255456-3255581:-1:exon

position:3255456:-1
position: 3255456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255581:-1
position: 3255581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3250781-3250830:-1:exon

position:3250781:-1
position: 3250781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3250830:-1
position: 3250830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3250002-3250202:-1:exon

position:3250002:-1
position: 3250002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3250202:-1
position: 3250202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3248778-3248906:-1:exon

position:3248778:-1
position: 3248778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248906:-1
position: 3248906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3246380-3246506:-1:exon

position:3246380:-1
position: 3246380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246506:-1
position: 3246506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3238141-3242526:-1:exon

position:3242526:-1
position: 3242526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR8
product: myotubularin related protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038747836.1
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3238141..3242526,3246362..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271110,3273482..3273644,3277591..3277713,3288320..3288358))
location: region:3238141-3288358:-1
so has part: feature:3288320-3288358:-1:exon
so has part: feature:3277591-3277713:-1:exon
so has part: feature:3273482-3273644:-1:exon
so has part: feature:3270953-3271110:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246362-3246506:-1:exon
so has part: feature:3238141-3242526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3288320-3288358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3277591-3277713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3273482-3273644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270953-3271110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268586-3268714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262985-3263119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3260766-3260898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258119-3258228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3255456-3255581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3250781-3250830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3250002-3250202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3248778-3248906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3246362-3246506:-1:exon

position:3246362:-1
position: 3246362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3238141-3242526:-1:exon

MTMR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MTMR8
product: myotubularin related protein 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038747839.1
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3238141..3242526,3246362..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271110,3273482..3273644,3277591..3277713,3279680..3279756))
location: region:3238141-3279756:-1
so has part: feature:3279680-3279756:-1:exon
so has part: feature:3277591-3277713:-1:exon
so has part: feature:3273482-3273644:-1:exon
so has part: feature:3270953-3271110:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246362-3246506:-1:exon
so has part: feature:3238141-3242526:-1:exon

position:3279756:-1
position: 3279756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3279680-3279756:-1:exon

position:3279680:-1
position: 3279680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3277591-3277713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3273482-3273644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270953-3271110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268586-3268714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262985-3263119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3260766-3260898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258119-3258228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3255456-3255581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3250781-3250830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3250002-3250202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3248778-3248906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3246362-3246506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3238141-3242526:-1:exon

MTMR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 8 isoform X2
translation: MEHIAVPKVENVKLLDRYVAKKSANGTLYLTATHLIYVDVSAEVRKETWILHHHIASVEKLPLTPAGCPLLLRCKNFRVAHFVFGSEREGHAVYSSLLKLSQPVKPDELYAFAYNPKSSKDSRESGWKLIDVKADYRRMGIPNEYWQITEANKNYEVCSTYPPDLVVPKTANRTTVVGSAKFRSRGRIPVLSYFYKANNAAICRCSQPLSGFSARCPEDEQMLQAISQANPGSPFMYVVDTRPKLNAMANRAAGKGYENEDNYANIRFKFIGIENIHVMRSSLQKLLEVCEMKAPSMSDFLAGLENSGWLRHIKAVTDAGIFLAQAVEREKASVLVHCSDGWDRTAQVCSLAGILLDPFYRTFKGLMVLIEKEWISMGHKFSQRCGHLEGDPKEVSPIFTQFVECVWQLMEQFPCAFEFNERFLLEIHDHAFSCQFGNFLGTCHREREELKICEKTHSLWPFLLQKKQEFRNPLYKGVTAYGTLQPNTLPFSFQFWCGMFNRFDKGMHPKQSALDHLLTCLRQKTELEENTTQLENKLPDLGRPFSERPGTQPEKTSVKPPRSPLADSPLRCEEEPSAPFPNGSLTPNLAPRPKESPPPPHRGHSVTGTIEASVVGGGSPEQQQQ
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3242257..3242526,3246380..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271110,3273482..3273644,3277591..3277713,3288320..3288343))
location: region:3242257-3288343:-1
so has part: feature:3288320-3288343:-1:exon
so has part: feature:3277591-3277713:-1:exon
so has part: feature:3273482-3273644:-1:exon
so has part: feature:3270953-3271110:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246380-3246506:-1:exon
so has part: feature:3242257-3242526:-1:exon

XP_038603766.1
type: Protein
SIO_000068: ncbiprotein

position:3242257:-1
position: 3242257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288343:-1
position: 3288343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3288320-3288343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3277591-3277713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3273482-3273644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270953-3271110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268586-3268714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262985-3263119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3260766-3260898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258119-3258228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3255456-3255581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3250781-3250830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3250002-3250202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3248778-3248906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3246380-3246506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3242257-3242526:-1:exon

MTMR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 8 isoform X1
translation: MEHIAVPKVENVKLLDRYVAKKSANGTLYLTATHLIYVDVSAEVRKETWILHHHIASVEKLPLTPAGCPLLLRCKNFRVAHFVFGSEREGHAVYSSLLKLSQPVKPDELYAFAYNPKSSKDSRESGWKLIDVKADYRRMGIPNEYWQITEANKNYEVCSTYPPDLVVPKTANRTTVVGSAKFRSRGRIPVLSYFYKANNAAICRCSQPLSGFSARCPEDEQMLQAISQANPGSPFMYVVDTRPKLNAMANRAAGKGYENEDNYANIRFKFIGIENIHVMRSSLQKLLEVCEMKAPSMSDFLAGLENSGWLRHIKAVTDAGIFLAQAVEREKASVLVHCSDGWDRTAQVCSLAGILLDPFYRTFKGLMVLIEKEWISMGHKFSQRCGHLEGDPKEVSPIFTQFVECVWQLMEQFPCAFEFNERFLLEIHDHAFSCQFGNFLGTCHREREELKICEKTHSLWPFLLQKKQEFRNPLYKGVTAYGTLQPNTLPFSFQFWCGMFNRFDKGMHPKQSALDHLLTCLRQKTELEENTTQLENVSSPGQKLPDLGRPFSERPGTQPEKTSVKPPRSPLADSPLRCEEEPSAPFPNGSLTPNLAPRPKESPPPPHRGHSVTGTIEASVVGGGSPEQQQQ
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3242257..3242526,3246362..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271110,3273482..3273644,3277591..3277713,3288320..3288343))
location: region:3242257-3288343:-1
so has part: feature:3288320-3288343:-1:exon
so has part: feature:3277591-3277713:-1:exon
so has part: feature:3273482-3273644:-1:exon
so has part: feature:3270953-3271110:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246362-3246506:-1:exon
so has part: feature:3242257-3242526:-1:exon

XP_038603764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3288320-3288343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3277591-3277713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3273482-3273644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270953-3271110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268586-3268714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262985-3263119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3260766-3260898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258119-3258228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3255456-3255581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3250781-3250830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3250002-3250202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3248778-3248906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3246362-3246506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3242257-3242526:-1:exon

MTMR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MTMR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 8 isoform X3
translation: MGIPNEYWQITEANKNYEVCSTYPPDLVVPKTANRTTVVGSAKFRSRGRIPVLSYFYKANNAAICRCSQPLSGFSARCPEDEQMLQAISQANPGSPFMYVVDTRPKLNAMANRAAGKGYENEDNYANIRFKFIGIENIHVMRSSLQKLLEVCEMKAPSMSDFLAGLENSGWLRHIKAVTDAGIFLAQAVEREKASVLVHCSDGWDRTAQVCSLAGILLDPFYRTFKGLMVLIEKEWISMGHKFSQRCGHLEGDPKEVSPIFTQFVECVWQLMEQFPCAFEFNERFLLEIHDHAFSCQFGNFLGTCHREREELKICEKTHSLWPFLLQKKQEFRNPLYKGVTAYGTLQPNTLPFSFQFWCGMFNRFDKGMHPKQSALDHLLTCLRQKTELEENTTQLENVSSPGQKLPDLGRPFSERPGTQPEKTSVKPPRSPLADSPLRCEEEPSAPFPNGSLTPNLAPRPKESPPPPHRGHSVTGTIEASVVGGGSPEQQQQ
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: complement(join(3242257..3242526,3246362..3246506,3248778..3248906,3250002..3250202,3250781..3250830,3255456..3255581,3258119..3258228,3260766..3260898,3262985..3263119,3268586..3268714,3270953..3271006))
location: region:3242257-3271006:-1
so has part: feature:3270953-3271006:-1:exon
so has part: feature:3268586-3268714:-1:exon
so has part: feature:3262985-3263119:-1:exon
so has part: feature:3260766-3260898:-1:exon
so has part: feature:3258119-3258228:-1:exon
so has part: feature:3255456-3255581:-1:exon
so has part: feature:3250781-3250830:-1:exon
so has part: feature:3250002-3250202:-1:exon
so has part: feature:3248778-3248906:-1:exon
so has part: feature:3246362-3246506:-1:exon
so has part: feature:3242257-3242526:-1:exon

XP_038603767.1
type: Protein
SIO_000068: ncbiprotein

position:3271006:-1
position: 3271006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3270953-3271006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3268586-3268714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3262985-3263119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3260766-3260898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3258119-3258228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3255456-3255581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3250781-3250830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3250002-3250202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3248778-3248906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3246362-3246506:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3242257-3242526:-1:exon

EDA2R
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EDA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3370359..3387996)
location: region:3370359-3387996:-1
so has part: feature:3370359-3387996:-1:exon
subclass of: SO_0000010

119930033
type: Gene
SIO_000068: ncbigene

position:3370359:-1
position: 3370359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3387996:-1
position: 3387996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3370359-3387996:-1:exon

EDA2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EDA2R
product: ectodysplasin A2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038748449.1
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(3370359..3370571,3370830..3371227,3371694..3371846,3372577..3372741,3372860..3372945,3373913..3374091,3374355..3374460,3387948..3387996))
location: region:3370359-3387996:-1
so has part: feature:3387948-3387996:-1:exon
so has part: feature:3374355-3374460:-1:exon
so has part: feature:3373913-3374091:-1:exon
so has part: feature:3372860-3372945:-1:exon
so has part: feature:3372577-3372741:-1:exon
so has part: feature:3371694-3371846:-1:exon
so has part: feature:3370830-3371227:-1:exon
so has part: feature:3370359-3370571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3387948-3387996:-1:exon

position:3387948:-1
position: 3387948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3374355-3374460:-1:exon

position:3374355:-1
position: 3374355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374460:-1
position: 3374460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3373913-3374091:-1:exon

position:3373913:-1
position: 3373913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374091:-1
position: 3374091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3372860-3372945:-1:exon

position:3372860:-1
position: 3372860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372945:-1
position: 3372945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3372577-3372741:-1:exon

position:3372577:-1
position: 3372577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372741:-1
position: 3372741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3371694-3371846:-1:exon

position:3371694:-1
position: 3371694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371846:-1
position: 3371846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3370830-3371227:-1:exon

position:3370830:-1
position: 3370830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371227:-1
position: 3371227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3370359-3370571:-1:exon

position:3370571:-1
position: 3370571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDA2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EDA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 27
translation: MVCQENQFQDERGQCVDCGQCGPGWELAKECGYGEGGPSPCTVCPRRRFKATQGHHGCQACTSCALFNRVQTASCTGTADAVCGHCLPGFYSKTRIGGRQDRECFPCSPQTPPSENQCPVRLDAGQPPGPSASWQEAVLVTLVSCALVAIALVLVALAFLYLRRFLKSHCQQVFRRSQDFMGQMGPCPMSSSGGCSPDEEPPPGPWGLAAKSWGSCVRPAAAGASAVDDVAPGLQMPLAPAGCELCPACPTPGLGPRPAASSPDTQLMLCSSEGHSGWAPGSLSSAGPPGAGPPPASAPASCASETHARWPHAPVECTEFDLHKFSNIGTNEGAGPVSPSCCLHARRPPQAPQPPTASSSHGAHVPW
SIO_010081: EDA2R
subclass of: SO_0000673
so part of: EDA2R
location: complement(join(3370536..3370571,3370830..3371227,3371694..3371846,3372577..3372741,3372860..3372945,3373913..3374091,3374355..3374441))
location: region:3370536-3374441:-1
so has part: feature:3374355-3374441:-1:exon
so has part: feature:3373913-3374091:-1:exon
so has part: feature:3372860-3372945:-1:exon
so has part: feature:3372577-3372741:-1:exon
so has part: feature:3371694-3371846:-1:exon
so has part: feature:3370830-3371227:-1:exon
so has part: feature:3370536-3370571:-1:exon

XP_038604377.1
type: Protein
SIO_000068: ncbiprotein

position:3370536:-1
position: 3370536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374441:-1
position: 3374441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3374355-3374441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3373913-3374091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3372860-3372945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3372577-3372741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3371694-3371846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3370830-3371227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3370536-3370571:-1:exon

AR
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3567310..3644359
location: region:3567310-3644359:1
so has part: feature:3567310-3644359:1:exon
subclass of: SO_0000010

119930035
type: Gene
SIO_000068: ncbigene

position:3567310:1
position: 3567310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3644359:1
position: 3644359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3567310-3644359:1:exon

AR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AR
product: androgen receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038748453.1
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(3567310..3568984,3618642..3618793,3629995..3630111,3639577..3639870,3641016..3641160,3642379..3642509,3643344..3643501,3643701..3644359)
location: region:3567310-3644359:1
so has part: feature:3567310-3568984:1:exon
so has part: feature:3618642-3618793:1:exon
so has part: feature:3629995-3630111:1:exon
so has part: feature:3639577-3639870:1:exon
so has part: feature:3641016-3641160:1:exon
so has part: feature:3642379-3642509:1:exon
so has part: feature:3643344-3643501:1:exon
so has part: feature:3643701-3644359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3567310-3568984:1:exon

position:3568984:1
position: 3568984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3618642-3618793:1:exon

position:3618642:1
position: 3618642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3618793:1
position: 3618793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3629995-3630111:1:exon

position:3629995:1
position: 3629995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630111:1
position: 3630111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3639577-3639870:1:exon

position:3639577:1
position: 3639577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3639870:1
position: 3639870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3641016-3641160:1:exon

position:3641016:1
position: 3641016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3641160:1
position: 3641160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3642379-3642509:1:exon

position:3642379:1
position: 3642379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3642509:1
position: 3642509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3643344-3643501:1:exon

position:3643344:1
position: 3643344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3643501:1
position: 3643501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3643701-3644359:1:exon

position:3643701:1
position: 3643701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: androgen receptor isoform X1
translation: MEVQLGLGRVHPRPPPPKAFRGAFQNLFQSVREVSQSPGARGGSNAPRAPPPPPPPPAAGASPAQQVRTEGSPDAAGTHAGYLSLDDDEDDEEEEEEEERAPRRRAAEGRPGTGTDGDPLPPNPPAAPAGDDSAVPGGLALLGPGFPGLLLPGEQDGPARQPAKEPAAVGYPGTAAGISDSAKELCRAVSVSMGLGGEALDHLSPGDQLRGDCMFAALLGSPPARPAPCPPDGKGGPPAPPPPPPPPGDDPAHHPTGDYGAYKAGCAKGPPDGPAPELPSPLALYKPAALDEGAAFAGRDYYNFQLALAGTPPHPRVKLESPLDYGPAWAAQCRYGELAGLAHGGPGAGSPAAPPSTWHTLFAADEGQFYGPVGTGGEPCPGGAAPYPYPRPEGDLAPPEMWYPGGVVGRMPFPGPVKSELAPWAEGYPGPYGDVRLEAAREHVLPIDYYFPPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGARKLKKLGSLKLQEEGEAAGGSGGGPPEEPGPPLGLSHMDSYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAVLLTSLNELGERQLVHIVKWAKALPGFRNLHVDDQMSVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQVPKILSGKVKPIYFHAQ
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(3567678..3568984,3618642..3618793,3629995..3630111,3639577..3639870,3641016..3641160,3642379..3642509,3643344..3643501,3643701..3643856)
location: region:3567678-3643856:1
so has part: feature:3567678-3568984:1:exon
so has part: feature:3618642-3618793:1:exon
so has part: feature:3629995-3630111:1:exon
so has part: feature:3639577-3639870:1:exon
so has part: feature:3641016-3641160:1:exon
so has part: feature:3642379-3642509:1:exon
so has part: feature:3643344-3643501:1:exon
so has part: feature:3643701-3643856:1:exon

XP_038604381.1
type: Protein
SIO_000068: ncbiprotein

position:3567678:1
position: 3567678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3643856:1
position: 3643856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3567678-3568984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3618642-3618793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629995-3630111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639577-3639870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3641016-3641160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3642379-3642509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3643344-3643501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3643701-3643856:1:exon

AR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AR
product: androgen receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038748454.1
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(3614223..3615767,3618642..3618793,3629995..3630111,3639577..3639870,3641016..3641160,3642379..3642509,3643344..3643501,3643701..3644359)
location: region:3614223-3644359:1
so has part: feature:3614223-3615767:1:exon
so has part: feature:3618642-3618793:1:exon
so has part: feature:3629995-3630111:1:exon
so has part: feature:3639577-3639870:1:exon
so has part: feature:3641016-3641160:1:exon
so has part: feature:3642379-3642509:1:exon
so has part: feature:3643344-3643501:1:exon
so has part: feature:3643701-3644359:1:exon

position:3614223:1
position: 3614223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3614223-3615767:1:exon

position:3615767:1
position: 3615767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3618642-3618793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629995-3630111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639577-3639870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3641016-3641160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3642379-3642509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3643344-3643501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3643701-3644359:1:exon

AR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: androgen receptor isoform X2
translation: MTADLRRGGRYSSSRDLCPRACSRASEISSGLEAAREHVLPIDYYFPPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGARKLKKLGSLKLQEEGEAAGGSGGGPPEEPGPPLGLSHMDSYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFAVLLTSLNELGERQLVHIVKWAKALPGFRNLHVDDQMSVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPTSCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQVPKILSGKVKPIYFHAQ
SIO_010081: AR
subclass of: SO_0000673
so part of: AR
location: join(3615676..3615767,3618642..3618793,3629995..3630111,3639577..3639870,3641016..3641160,3642379..3642509,3643344..3643501,3643701..3643856)
location: region:3615676-3643856:1
so has part: feature:3615676-3615767:1:exon
so has part: feature:3618642-3618793:1:exon
so has part: feature:3629995-3630111:1:exon
so has part: feature:3639577-3639870:1:exon
so has part: feature:3641016-3641160:1:exon
so has part: feature:3642379-3642509:1:exon
so has part: feature:3643344-3643501:1:exon
so has part: feature:3643701-3643856:1:exon

XP_038604382.1
type: Protein
SIO_000068: ncbiprotein

position:3615676:1
position: 3615676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615676-3615767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3618642-3618793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629995-3630111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639577-3639870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3641016-3641160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3642379-3642509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3643344-3643501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3643701-3643856:1:exon

OPHN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: OPHN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3658329..3753143)
location: region:3658329-3753143:-1
so has part: feature:3658329-3753143:-1:exon
subclass of: SO_0000010

119929918
type: Gene
SIO_000068: ncbigene

position:3658329:-1
position: 3658329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3753143:-1
position: 3753143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3658329-3753143:-1:exon

OPHN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: OPHN1
product: oligophrenin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748273.1
SIO_010081: OPHN1
subclass of: SO_0000673
so part of: OPHN1
location: complement(join(3658329..3659898,3663119..3663169,3663301..3663351,3664189..3664354,3665503..3665808,3669504..3669660,3698742..3698901,3699095..3699201,3699563..3699621,3700385..3700469,3704137..3704211,3705839..3705901,3706043..3706076,3712139..3712217,3714518..3714609,3714933..3715033,3715691..3715820,3716802..3716906,3717203..3717313,3717428..3717529,3727065..3727136,3731064..3731125,3733469..3733564,3752990..3753143))
location: region:3658329-3753143:-1
so has part: feature:3752990-3753143:-1:exon
so has part: feature:3733469-3733564:-1:exon
so has part: feature:3731064-3731125:-1:exon
so has part: feature:3727065-3727136:-1:exon
so has part: feature:3717428-3717529:-1:exon
so has part: feature:3717203-3717313:-1:exon
so has part: feature:3716802-3716906:-1:exon
so has part: feature:3715691-3715820:-1:exon
so has part: feature:3714933-3715033:-1:exon
so has part: feature:3714518-3714609:-1:exon
so has part: feature:3712139-3712217:-1:exon
so has part: feature:3706043-3706076:-1:exon
so has part: feature:3705839-3705901:-1:exon
so has part: feature:3704137-3704211:-1:exon
so has part: feature:3700385-3700469:-1:exon
so has part: feature:3699563-3699621:-1:exon
so has part: feature:3699095-3699201:-1:exon
so has part: feature:3698742-3698901:-1:exon
so has part: feature:3669504-3669660:-1:exon
so has part: feature:3665503-3665808:-1:exon
so has part: feature:3664189-3664354:-1:exon
so has part: feature:3663301-3663351:-1:exon
so has part: feature:3663119-3663169:-1:exon
so has part: feature:3658329-3659898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3752990-3753143:-1:exon

position:3752990:-1
position: 3752990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3733469-3733564:-1:exon

position:3733469:-1
position: 3733469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3733564:-1
position: 3733564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3731064-3731125:-1:exon

position:3731064:-1
position: 3731064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731125:-1
position: 3731125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3727065-3727136:-1:exon

position:3727065:-1
position: 3727065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727136:-1
position: 3727136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3717428-3717529:-1:exon

position:3717428:-1
position: 3717428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3717529:-1
position: 3717529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3717203-3717313:-1:exon

position:3717203:-1
position: 3717203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3717313:-1
position: 3717313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3716802-3716906:-1:exon

position:3716802:-1
position: 3716802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3716906:-1
position: 3716906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3715691-3715820:-1:exon

position:3715691:-1
position: 3715691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715820:-1
position: 3715820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3714933-3715033:-1:exon

position:3714933:-1
position: 3714933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715033:-1
position: 3715033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3714518-3714609:-1:exon

position:3714518:-1
position: 3714518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714609:-1
position: 3714609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3712139-3712217:-1:exon

position:3712139:-1
position: 3712139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3712217:-1
position: 3712217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3706043-3706076:-1:exon

position:3706043:-1
position: 3706043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3706076:-1
position: 3706076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3705839-3705901:-1:exon

position:3705839:-1
position: 3705839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3705901:-1
position: 3705901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3704137-3704211:-1:exon

position:3704137:-1
position: 3704137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704211:-1
position: 3704211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3700385-3700469:-1:exon

position:3700385:-1
position: 3700385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700469:-1
position: 3700469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3699563-3699621:-1:exon

position:3699563:-1
position: 3699563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699621:-1
position: 3699621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3699095-3699201:-1:exon

position:3699095:-1
position: 3699095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699201:-1
position: 3699201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3698742-3698901:-1:exon

position:3698742:-1
position: 3698742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3698901:-1
position: 3698901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3669504-3669660:-1:exon

position:3669504:-1
position: 3669504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3669660:-1
position: 3669660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3665503-3665808:-1:exon

position:3665503:-1
position: 3665503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3665808:-1
position: 3665808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3664189-3664354:-1:exon

position:3664189:-1
position: 3664189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664354:-1
position: 3664354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3663301-3663351:-1:exon

position:3663301:-1
position: 3663301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3663351:-1
position: 3663351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3663119-3663169:-1:exon

position:3663119:-1
position: 3663119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3663169:-1
position: 3663169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3658329-3659898:-1:exon

position:3659898:-1
position: 3659898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPHN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: OPHN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: oligophrenin-1
translation: MGHPPLEFSDCYLDSPDFRDRLKCYEQELERTNRFIKDVVRDGACLIAAIRGYSSAVQKFSQTLQSFQFDFIGDTLTDDEINIAESFKEFAELLREVENERMMMVQNASDLLIKPLETFRREEIGVTKERKKKFEKDGERFYSLLDRHLNLSSKKKESQLQEADQQVDKERRSFFESSLDYVHQIQEVQESKKFNVVEPVLAFLHSLFISNNLTVELTQDFLPYKQQLQISLQNTRNHFLSTREEMEDLKERMKETPQTCKLPGQPTIEGYLYSQEKWALGISWVKHYCRYKKETRTLTMTPMEQKPGAKQGSSDLTLTHCVRRKTESIDKRFCFDIETSERPGTLTLQALSEANRRLWMEAMDGKEPIYHSPITKREEMELNDVGFRFVRKCINAVEAKGLWTEGVYRTVGSNLQVQKLLNAFFDPRCPGEVDLQDSDWDIKTITSSLKFYLRNLSEPVMTYKLHKELVSAAKSENLDERLGAVHSLVYKLPPKNREMLELLIRHLVSVCELSRENLMTPANMAVVFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEHFGKICSGPPEDNVAPPAPPPRVSARRHKPITISKRPLRERAEFYCPPPAPAAQNHGDHHHRTVNGSLSGSLEPPRPQKQPPGPRPREGDPRGRSPSRPAHEAHPEQSPEQRPGPRLPEGAIRPPPTRAPNGLGTEPPRIPSLHIKRPAPRPLAHSKEGDADAAGRLRSPGDRPALTRPPMRPPDPPARTLVPQRLEQRPEPTAGGTEGIPPSVVASRTKFFETASRKPGSPSPAQGRLPGDES
SIO_010081: OPHN1
subclass of: SO_0000673
so part of: OPHN1
location: complement(join(3663127..3663169,3663301..3663351,3664189..3664354,3665503..3665808,3669504..3669660,3698742..3698901,3699095..3699201,3699563..3699621,3700385..3700469,3704137..3704211,3705839..3705901,3706043..3706076,3712139..3712217,3714518..3714609,3714933..3715033,3715691..3715820,3716802..3716906,3717203..3717313,3717428..3717529,3727065..3727136,3731064..3731125,3733469..3733564,3752990..3753143))
location: region:3663127-3753143:-1
so has part: feature:3752990-3753143:-1:exon
so has part: feature:3733469-3733564:-1:exon
so has part: feature:3731064-3731125:-1:exon
so has part: feature:3727065-3727136:-1:exon
so has part: feature:3717428-3717529:-1:exon
so has part: feature:3717203-3717313:-1:exon
so has part: feature:3716802-3716906:-1:exon
so has part: feature:3715691-3715820:-1:exon
so has part: feature:3714933-3715033:-1:exon
so has part: feature:3714518-3714609:-1:exon
so has part: feature:3712139-3712217:-1:exon
so has part: feature:3706043-3706076:-1:exon
so has part: feature:3705839-3705901:-1:exon
so has part: feature:3704137-3704211:-1:exon
so has part: feature:3700385-3700469:-1:exon
so has part: feature:3699563-3699621:-1:exon
so has part: feature:3699095-3699201:-1:exon
so has part: feature:3698742-3698901:-1:exon
so has part: feature:3669504-3669660:-1:exon
so has part: feature:3665503-3665808:-1:exon
so has part: feature:3664189-3664354:-1:exon
so has part: feature:3663301-3663351:-1:exon
so has part: feature:3663127-3663169:-1:exon

XP_038604201.1
type: Protein
SIO_000068: ncbiprotein

position:3663127:-1
position: 3663127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3752990-3753143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3733469-3733564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3731064-3731125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3727065-3727136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3717428-3717529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3717203-3717313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3716802-3716906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3715691-3715820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3714933-3715033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3714518-3714609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3712139-3712217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3706043-3706076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3705839-3705901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3704137-3704211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3700385-3700469:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3699563-3699621:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3699095-3699201:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3698742-3698901:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3669504-3669660:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3665503-3665808:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3664189-3664354:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3663301-3663351:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3663127-3663169:-1:exon

YIPF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: YIPF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3772821..3790158
location: region:3772821-3790158:1
so has part: feature:3772821-3790158:1:exon
subclass of: SO_0000010

119929726
type: Gene
SIO_000068: ncbigene

position:3772821:1
position: 3772821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3790158:1
position: 3790158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772821-3790158:1:exon

YIPF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: YIPF6
product: Yip1 domain family member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038747971.1
SIO_010081: YIPF6
subclass of: SO_0000673
so part of: YIPF6
location: join(3772821..3772878,3777518..3777646,3780454..3780532,3784946..3784988,3788062..3788187,3788497..3788663,3789233..3790158)
location: region:3772821-3790158:1
so has part: feature:3772821-3772878:1:exon
so has part: feature:3777518-3777646:1:exon
so has part: feature:3780454-3780532:1:exon
so has part: feature:3784946-3784988:1:exon
so has part: feature:3788062-3788187:1:exon
so has part: feature:3788497-3788663:1:exon
so has part: feature:3789233-3790158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3772821-3772878:1:exon

position:3772878:1
position: 3772878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3777518-3777646:1:exon

position:3777518:1
position: 3777518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777646:1
position: 3777646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3780454-3780532:1:exon

position:3780454:1
position: 3780454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780532:1
position: 3780532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3784946-3784988:1:exon

position:3784946:1
position: 3784946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784988:1
position: 3784988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3788062-3788187:1:exon

position:3788062:1
position: 3788062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788187:1
position: 3788187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3788497-3788663:1:exon

position:3788497:1
position: 3788497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788663:1
position: 3788663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3789233-3790158:1:exon

position:3789233:1
position: 3789233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: YIPF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF6
translation: MAEAEERAGGGAADKPLFAGLADVSISEDVPVEGQITVPMGTHGPEDDYSTLDEPVKDTIMRDLKAVGKKFVHVMYPKKSSALLRDWDLWGPLVLCVSLALMLQGGSADSKEDGGPQFAEVFVVIWFGAVVITLNSKLLGGTISFFQSLCVLGYCVLPLTVALLLCRLLALAGPGGTSAAIFIVRLFLVLAMFAWSTLASTAFLADSQPPNRKALVVYPIFLFYFVISWMILTFTPQ
SIO_010081: YIPF6
subclass of: SO_0000673
so part of: YIPF6
location: join(3772828..3772878,3777518..3777646,3780454..3780532,3784946..3784988,3788062..3788187,3788497..3788663,3789233..3789351)
location: region:3772828-3789351:1
so has part: feature:3772828-3772878:1:exon
so has part: feature:3777518-3777646:1:exon
so has part: feature:3780454-3780532:1:exon
so has part: feature:3784946-3784988:1:exon
so has part: feature:3788062-3788187:1:exon
so has part: feature:3788497-3788663:1:exon
so has part: feature:3789233-3789351:1:exon

XP_038603899.1
type: Protein
SIO_000068: ncbiprotein

position:3772828:1
position: 3772828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3789351:1
position: 3789351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772828-3772878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3777518-3777646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3780454-3780532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3784946-3784988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3788062-3788187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788497-3788663:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3789233-3789351:1:exon

STARD8
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: STARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3799892..3875711
location: region:3799892-3875711:1
so has part: feature:3799892-3875711:1:exon
subclass of: SO_0000010

119930051
type: Gene
SIO_000068: ncbigene

position:3799892:1
position: 3799892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3875711:1
position: 3875711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3799892-3875711:1:exon

STARD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: STARD8
product: StAR related lipid transfer domain containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038748486.1
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(3799892..3799973,3815625..3815655,3854476..3854547,3855307..3855388,3855675..3855735,3856803..3857623,3860757..3860930,3862982..3863141,3865535..3865733,3866867..3867077,3868515..3868629,3869199..3869450,3870335..3870555,3873224..3873415,3874787..3875711)
location: region:3799892-3875711:1
so has part: feature:3799892-3799973:1:exon
so has part: feature:3815625-3815655:1:exon
so has part: feature:3854476-3854547:1:exon
so has part: feature:3855307-3855388:1:exon
so has part: feature:3855675-3855735:1:exon
so has part: feature:3856803-3857623:1:exon
so has part: feature:3860757-3860930:1:exon
so has part: feature:3862982-3863141:1:exon
so has part: feature:3865535-3865733:1:exon
so has part: feature:3866867-3867077:1:exon
so has part: feature:3868515-3868629:1:exon
so has part: feature:3869199-3869450:1:exon
so has part: feature:3870335-3870555:1:exon
so has part: feature:3873224-3873415:1:exon
so has part: feature:3874787-3875711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3799892-3799973:1:exon

position:3799973:1
position: 3799973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815625-3815655:1:exon

position:3815625:1
position: 3815625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3815655:1
position: 3815655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3854476-3854547:1:exon

position:3854476:1
position: 3854476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3854547:1
position: 3854547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3855307-3855388:1:exon

position:3855307:1
position: 3855307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3855388:1
position: 3855388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3855675-3855735:1:exon

position:3855675:1
position: 3855675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3855735:1
position: 3855735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3856803-3857623:1:exon

position:3856803:1
position: 3856803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3857623:1
position: 3857623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3860757-3860930:1:exon

position:3860757:1
position: 3860757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3860930:1
position: 3860930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3862982-3863141:1:exon

position:3862982:1
position: 3862982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3863141:1
position: 3863141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3865535-3865733:1:exon

position:3865535:1
position: 3865535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865733:1
position: 3865733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3866867-3867077:1:exon

position:3866867:1
position: 3866867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867077:1
position: 3867077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3868515-3868629:1:exon

position:3868515:1
position: 3868515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3868629:1
position: 3868629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3869199-3869450:1:exon

position:3869199:1
position: 3869199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3869450:1
position: 3869450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3870335-3870555:1:exon

position:3870335:1
position: 3870335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870555:1
position: 3870555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3873224-3873415:1:exon

position:3873224:1
position: 3873224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3873415:1
position: 3873415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3874787-3875711:1:exon

position:3874787:1
position: 3874787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STARD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: STARD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stAR-related lipid transfer protein 8
translation: MPLLEAFWACFRKIKCSPFLEGKKAEAEVKKACSWLRAAGFPQYVQLYDDSQFPLDIESVKRDHPFLDQDSLRALCRRLMTLNASASMKLEVRFQHKNEASQEDLCIISDHRARLGPSAPPSPGLRAASSHESVLTTLSTASLPSQASGGPLLLAPPGPACRRPGKARPGSFLRRLESLRHREKPGRASPPPESRPRGTVQVGPGGAHRVHVPGDHKPGTFPRSLSIESLCPEAGRALEDRHLPEARARRDSVGSCASLYDNVACGHQQPDEEEEEGGGDAPLDAILQHVRGLQQRVELWARAVCPELDDDDDDDEGTDSGGEAAFPPGLSPEDERSGSDAGTSASDSLTEAEDAERRDSGVGASLTRPCRKIRWHSFQNSHRPSLGSASLELSCRSCAQINLLQKYSLLRLTAFLDKFSAAPGRGWAWSVPKFMKRSKTPDYRGRSVFGVPPIVHVQRTGQPLPQSIQQAMRYLRGQCRHQVGVFRRSGVKSRIEALRRLNEASPDHVSYAGQSPYDVADLLKQYFRDLPEPLFTSKLGDSFLRIYHDVPKEHRLAAVQAAVTLLPDENREVLQTLLYFLSDMARAQGNQMTAGSLAVCLAPSVFHLNVSKKEGTSPRAIPKRGTAGKPAQRDLNDNMAATQGLSHMISDCKKLFKVPQDMMLQLCHSYAASPGPEPGGESGGPPGAGAGHPGFLLPGDGASQEDLLEASVQDLLCEAAERFKGWINVPGPRNTQLASKKVRDGAAPRRAWKASSSVRASPGAVLQRVLRERALWDEDLLRERVLAVPGPDTDLYHYVTGSMAPHPHRDFLVLRRWRSDLPRGGCLLVSTSLEPGTPVPPLPTLEGGVRALLFTSQYLMEPCGPALTRLTHICRADLRGRSPDWYNKAFGHLCATEVARIRDSFPAAQPGRPSAKP
SIO_010081: STARD8
subclass of: SO_0000673
so part of: STARD8
location: join(3799929..3799973,3815625..3815655,3854476..3854547,3855307..3855388,3855675..3855735,3856803..3857623,3860757..3860930,3862982..3863141,3865535..3865733,3866867..3867077,3868515..3868629,3869199..3869450,3870335..3870555,3873224..3873415,3874787..3874904)
location: region:3799929-3874904:1
so has part: feature:3799929-3799973:1:exon
so has part: feature:3815625-3815655:1:exon
so has part: feature:3854476-3854547:1:exon
so has part: feature:3855307-3855388:1:exon
so has part: feature:3855675-3855735:1:exon
so has part: feature:3856803-3857623:1:exon
so has part: feature:3860757-3860930:1:exon
so has part: feature:3862982-3863141:1:exon
so has part: feature:3865535-3865733:1:exon
so has part: feature:3866867-3867077:1:exon
so has part: feature:3868515-3868629:1:exon
so has part: feature:3869199-3869450:1:exon
so has part: feature:3870335-3870555:1:exon
so has part: feature:3873224-3873415:1:exon
so has part: feature:3874787-3874904:1:exon

XP_038604414.1
type: Protein
SIO_000068: ncbiprotein

position:3799929:1
position: 3799929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3874904:1
position: 3874904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3799929-3799973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815625-3815655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3854476-3854547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3855307-3855388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3855675-3855735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3856803-3857623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3860757-3860930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3862982-3863141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3865535-3865733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3866867-3867077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868515-3868629:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3869199-3869450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3870335-3870555:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3873224-3873415:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3874787-3874904:1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4016461..4016531
location: region:4016461-4016531:1
so has part: feature:4016461-4016531:1:exon
subclass of: SO_0000663

119930349
type: Gene
SIO_000068: ncbigene

position:4016461:1
position: 4016461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4016531:1
position: 4016531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016461-4016531:1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9261
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4016493..4016495,aa:Gly,seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: 4016461..4016531
location: region:4016461-4016531:1
so has part: feature:4016461-4016531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4016461-4016531:1:exon

LOC119929999
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4017843..4080488
location: region:4017843-4080488:1
so has part: feature:4017843-4080488:1:exon
subclass of: SO_0000010

119929999
type: Gene
SIO_000068: ncbigene

position:4017843:1
position: 4017843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080488:1
position: 4080488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4017843-4080488:1:exon

LOC119929999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929999
product: DNA-directed RNA polymerase II subunit RPB1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038748405.1
SIO_010081: LOC119929999
subclass of: SO_0000673
so part of: LOC119929999
location: join(4017843..4017857,4027040..4027104,4031375..4031459,4040911..4041135,4041376..4041414,4047956..4048034,4062649..4062755,4064949..4065081,4075570..4075662,4076015..4076057,4076218..4076332,4079353..4079469,4079728..4079970,4080291..4080488)
location: region:4017843-4080488:1
so has part: feature:4017843-4017857:1:exon
so has part: feature:4027040-4027104:1:exon
so has part: feature:4031375-4031459:1:exon
so has part: feature:4040911-4041135:1:exon
so has part: feature:4041376-4041414:1:exon
so has part: feature:4047956-4048034:1:exon
so has part: feature:4062649-4062755:1:exon
so has part: feature:4064949-4065081:1:exon
so has part: feature:4075570-4075662:1:exon
so has part: feature:4076015-4076057:1:exon
so has part: feature:4076218-4076332:1:exon
so has part: feature:4079353-4079469:1:exon
so has part: feature:4079728-4079970:1:exon
so has part: feature:4080291-4080488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4017843-4017857:1:exon

position:4017857:1
position: 4017857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4027040-4027104:1:exon

position:4027040:1
position: 4027040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027104:1
position: 4027104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4031375-4031459:1:exon

position:4031375:1
position: 4031375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4031459:1
position: 4031459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4040911-4041135:1:exon

position:4040911:1
position: 4040911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041135:1
position: 4041135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4041376-4041414:1:exon

position:4041376:1
position: 4041376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041414:1
position: 4041414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4047956-4048034:1:exon

position:4047956:1
position: 4047956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048034:1
position: 4048034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4062649-4062755:1:exon

position:4062649:1
position: 4062649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062755:1
position: 4062755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4064949-4065081:1:exon

position:4064949:1
position: 4064949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065081:1
position: 4065081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4075570-4075662:1:exon

position:4075570:1
position: 4075570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4075662:1
position: 4075662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4076015-4076057:1:exon

position:4076015:1
position: 4076015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076057:1
position: 4076057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4076218-4076332:1:exon

position:4076218:1
position: 4076218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076332:1
position: 4076332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4079353-4079469:1:exon

position:4079353:1
position: 4079353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079469:1
position: 4079469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4079728-4079970:1:exon

position:4079728:1
position: 4079728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079970:1
position: 4079970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4080291-4080488:1:exon

position:4080291:1
position: 4080291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119929999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1-like
translation: MGMETELGIWREREPALRGIGGNSGPRAAPHPGRMPAQRPKVRVTPGLEDQRVDTHPSGRAQATPTSEDAIRQAPPTLDSQHPSGRAQAAPLGGDVIRWTTPALGSQQPSGHARQVMTPSSNPAYFRKPRPHATPRGLSSITMTFLNRRRQLRLWPPARPPSPTPNNYGVQAGAYSVIRIQSLGLPVVGSPAARPLDVYLVGLVLGPRGRFPRRKARDPMGDHLGGLGRVLGGPRARLRSGWSLPGGGQGPAHPDLAQSQAPPTFDSQHPSGRDDAPPTPDSQHRPGYGTATPIRPEGSAPAPPFVFPVRRSLCAPRSAQPHATPRGLSSITMSSPEPLWDPSSPPKSLPEVSQCSPEPLWDPSSPPKSLLESSPEPLWGPSSPPKSLPGVSQSSPEPLWGPSSPPKSLLGVSQSSPEPLWDPSSPPRSLPGVSQSSPEPLWDPSSPPKSLPGSSPEPLWNPSSPPKSLPGVSQSPQNLPGTPPAPQNHPRGPPGSFWDPSPNPQLGRKRPKIWDFCL
SIO_010081: LOC119929999
subclass of: SO_0000673
so part of: LOC119929999
location: join(4017843..4017857,4027040..4027104,4031375..4031459,4040911..4041135,4041376..4041414,4047956..4048034,4062649..4062755,4064949..4065081,4075570..4075662,4076015..4076057,4076218..4076332,4079353..4079469,4079728..4079970,4080291..4080488)
location: region:4017843-4080488:1
so has part: feature:4017843-4017857:1:exon
so has part: feature:4027040-4027104:1:exon
so has part: feature:4031375-4031459:1:exon
so has part: feature:4040911-4041135:1:exon
so has part: feature:4041376-4041414:1:exon
so has part: feature:4047956-4048034:1:exon
so has part: feature:4062649-4062755:1:exon
so has part: feature:4064949-4065081:1:exon
so has part: feature:4075570-4075662:1:exon
so has part: feature:4076015-4076057:1:exon
so has part: feature:4076218-4076332:1:exon
so has part: feature:4079353-4079469:1:exon
so has part: feature:4079728-4079970:1:exon
so has part: feature:4080291-4080488:1:exon

XP_038604333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4017843-4017857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4027040-4027104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4031375-4031459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4040911-4041135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4041376-4041414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4047956-4048034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4062649-4062755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4064949-4065081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4075570-4075662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4076015-4076057:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4076218-4076332:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4079353-4079469:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079728-4079970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4080291-4080488:1:exon

EFNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EFNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4097535..4131387)
location: region:4097535-4131387:-1
so has part: feature:4097535-4131387:-1:exon
subclass of: SO_0000010

119930000
type: Gene
SIO_000068: ncbigene

position:4097535:-1
position: 4097535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131387:-1
position: 4131387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4097535-4131387:-1:exon

EFNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EFNB1
product: ephrin B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748406.1
SIO_010081: EFNB1
subclass of: SO_0000673
so part of: EFNB1
location: complement(join(4097535..4098490,4098573..4098783,4100066..4100197,4100289..4100381,4104204..4104481,4115678..4116039,4116150..4116268,4130946..4131387))
location: region:4097535-4131387:-1
so has part: feature:4130946-4131387:-1:exon
so has part: feature:4116150-4116268:-1:exon
so has part: feature:4115678-4116039:-1:exon
so has part: feature:4104204-4104481:-1:exon
so has part: feature:4100289-4100381:-1:exon
so has part: feature:4100066-4100197:-1:exon
so has part: feature:4098573-4098783:-1:exon
so has part: feature:4097535-4098490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4130946-4131387:-1:exon

position:4130946:-1
position: 4130946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4116150-4116268:-1:exon

position:4116150:-1
position: 4116150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4116268:-1
position: 4116268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4115678-4116039:-1:exon

position:4115678:-1
position: 4115678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4116039:-1
position: 4116039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4104204-4104481:-1:exon

position:4104204:-1
position: 4104204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4104481:-1
position: 4104481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4100289-4100381:-1:exon

position:4100289:-1
position: 4100289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100381:-1
position: 4100381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4100066-4100197:-1:exon

position:4100066:-1
position: 4100066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100197:-1
position: 4100197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4098573-4098783:-1:exon

position:4098573:-1
position: 4098573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098783:-1
position: 4098783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4097535-4098490:-1:exon

position:4098490:-1
position: 4098490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EFNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-B1
translation: MRRSHQVALQRRALRPGLSRLLAATRQSAASLRPGLSRPLAATRQSAASLRPGLPCPLAAVRRSAASDRASPAPLRRLGAAQPPSDRASPASLRRLGAAQPPSDRASPAPLRRFGAAQPQTGPPLPPCGGSAQRSLPQTGPHLPPCGVPPRGGRVPFKGPSPPASVGVSSREAPPGGRPPLAGAVGAGALVPPRRQGRGAGAAPPPGGGVRACPPVSACPPVSPSPCPRPRVPVPVSPACGSGRSPGGAGAPGAAGGDGALSPPTPSMGGPRLAAPALALALALALGRLATPLARTLDPVAWTSHNPKFLSGTGLVIHPEIGDKLDITCPRAEAGRPYEYYKLYLVRREQAAACSTVLDPNVLVTCNRPDTEIRFTIKFQEFSPNYMGLEFKRRRDYYITSTSNGSLEGLENREGGVCQSRSMKIVMKVGQDPSGAGPEPPATGRPGKEAADNAAGAATQAPRGARPSGGTDGKHETVNQAGGGGGVADGFFGSKVAVFAAIGAGCVIFLLLIIFLTVLLLKLRKRHRRHSQARAAALSLRTLAGPGGGGTAGTEASDIIIPLRTAENNYCPHYEKVSGDYGHPVYIVQEMPPQSPANIYYKV
SIO_010081: EFNB1
subclass of: SO_0000673
so part of: EFNB1
location: complement(join(4098316..4098490,4098573..4098783,4100066..4100197,4100289..4100381,4104204..4104481,4115678..4116039,4116150..4116268,4130946..4131387))
location: region:4098316-4131387:-1
so has part: feature:4130946-4131387:-1:exon
so has part: feature:4116150-4116268:-1:exon
so has part: feature:4115678-4116039:-1:exon
so has part: feature:4104204-4104481:-1:exon
so has part: feature:4100289-4100381:-1:exon
so has part: feature:4100066-4100197:-1:exon
so has part: feature:4098573-4098783:-1:exon
so has part: feature:4098316-4098490:-1:exon

XP_038604334.1
type: Protein
SIO_000068: ncbiprotein

position:4098316:-1
position: 4098316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130946-4131387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4116150-4116268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4115678-4116039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4104204-4104481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100289-4100381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4100066-4100197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4098573-4098783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4098316-4098490:-1:exon

FAM155B
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FAM155B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4149526..4170858
location: region:4149526-4170858:1
so has part: feature:4149526-4170858:1:exon
subclass of: SO_0000010

119930002
type: Gene
SIO_000068: ncbigene

position:4149526:1
position: 4149526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170858:1
position: 4170858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149526-4170858:1:exon

FAM155B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FAM155B
product: family with sequence similarity 155 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748407.1
SIO_010081: FAM155B
subclass of: SO_0000673
so part of: FAM155B
location: join(4149526..4149602,4149871..4149982,4150014..4150325,4169046..4169217,4170286..4170478,4170590..4170858)
location: region:4149526-4170858:1
so has part: feature:4149526-4149602:1:exon
so has part: feature:4149871-4149982:1:exon
so has part: feature:4150014-4150325:1:exon
so has part: feature:4169046-4169217:1:exon
so has part: feature:4170286-4170478:1:exon
so has part: feature:4170590-4170858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4149526-4149602:1:exon

position:4149602:1
position: 4149602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4149871-4149982:1:exon

position:4149871:1
position: 4149871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4149982:1
position: 4149982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4150014-4150325:1:exon

position:4150014:1
position: 4150014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4150325:1
position: 4150325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4169046-4169217:1:exon

position:4169046:1
position: 4169046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4169217:1
position: 4169217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4170286-4170478:1:exon

position:4170286:1
position: 4170286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170478:1
position: 4170478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4170590-4170858:1:exon

position:4170590:1
position: 4170590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM155B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FAM155B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein FAM155B
translation: MRGPSWCPWRRAASPGAGARGSRSWGGGPRPPDRPRARGWRLWLATLLLFTVLLWTPLWPCAGPPRPAPAPPLALDAPGGPLGALRLAFCDAYTLGDLLLAGRAGPQGPGCSLDALRGDGDACARCLGAFRRLDRHAQEKFDEFDGLLRRYLPAPDYSVRSCVGDCKAVYKAWLCSEYFNVTQQQCRRRVPCKQYCLEVQTRCPFVLPDNDDLIYGGLPGFICAGWLEGPAGGEEATCCDVQWDSCDFPPDGGEGGGGNASAPPPDHHHHRRRRHHHHHHQQPTRRRRRVVSFSGAGAGAGPEALPAREEGLARDE
SIO_010081: FAM155B
subclass of: SO_0000673
so part of: FAM155B
location: join(4149526..4149602,4149871..4149982,4150014..4150325,4169046..4169217,4170286..4170478,4170590..4170674)
location: region:4149526-4170674:1
so has part: feature:4149526-4149602:1:exon
so has part: feature:4149871-4149982:1:exon
so has part: feature:4150014-4150325:1:exon
so has part: feature:4169046-4169217:1:exon
so has part: feature:4170286-4170478:1:exon
so has part: feature:4170590-4170674:1:exon

XP_038604335.1
type: Protein
SIO_000068: ncbiprotein

position:4170674:1
position: 4170674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149526-4149602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4149871-4149982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4150014-4150325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4169046-4169217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4170286-4170478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4170590-4170674:1:exon

LOC119929873
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4151903..4152925)
location: region:4151903-4152925:-1
so has part: feature:4151903-4152925:-1:exon
subclass of: SO_0000011

119929873
type: Gene
SIO_000068: ncbigene

position:4151903:-1
position: 4151903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152925:-1
position: 4152925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4151903-4152925:-1:exon

LOC119929873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119929873
product: uncharacterized LOC119929873
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005451596.1
SIO_010081: LOC119929873
subclass of: SO_0000673
so part of: LOC119929873
location: complement(join(4151903..4151941,4152019..4152105,4152191..4152277,4152435..4152521,4152639..4152725,4152839..4152925))
location: region:4151903-4152925:-1
so has part: feature:4152839-4152925:-1:exon
so has part: feature:4152639-4152725:-1:exon
so has part: feature:4152435-4152521:-1:exon
so has part: feature:4152191-4152277:-1:exon
so has part: feature:4152019-4152105:-1:exon
so has part: feature:4151903-4151941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4152839-4152925:-1:exon

position:4152839:-1
position: 4152839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4152639-4152725:-1:exon

position:4152639:-1
position: 4152639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152725:-1
position: 4152725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4152435-4152521:-1:exon

position:4152435:-1
position: 4152435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152521:-1
position: 4152521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4152191-4152277:-1:exon

position:4152191:-1
position: 4152191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152277:-1
position: 4152277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4152019-4152105:-1:exon

position:4152019:-1
position: 4152019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152105:-1
position: 4152105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4151903-4151941:-1:exon

position:4151941:-1
position: 4151941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDA
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: EDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4262907..4273383
location: region:4262907-4273383:1
so has part: feature:4262907-4273383:1:exon
subclass of: SO_0000010

119930003
type: Gene
SIO_000068: ncbigene

position:4262907:1
position: 4262907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273383:1
position: 4273383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262907-4273383:1:exon

EDA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: EDA
product: ectodysplasin A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748408.1
SIO_010081: EDA
subclass of: SO_0000673
so part of: EDA
location: join(4262907..4262936,4263672..4263852,4264163..4264197,4264352..4264403,4265511..4265626,4273035..4273383)
location: region:4262907-4273383:1
so has part: feature:4262907-4262936:1:exon
so has part: feature:4263672-4263852:1:exon
so has part: feature:4264163-4264197:1:exon
so has part: feature:4264352-4264403:1:exon
so has part: feature:4265511-4265626:1:exon
so has part: feature:4273035-4273383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4262907-4262936:1:exon

position:4262936:1
position: 4262936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4263672-4263852:1:exon

position:4263672:1
position: 4263672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4263852:1
position: 4263852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4264163-4264197:1:exon

position:4264163:1
position: 4264163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4264197:1
position: 4264197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4264352-4264403:1:exon

position:4264352:1
position: 4264352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4264403:1
position: 4264403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4265511-4265626:1:exon

position:4265511:1
position: 4265511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265626:1
position: 4265626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4273035-4273383:1:exon

position:4273035:1
position: 4273035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: EDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectodysplasin-A
translation: MSLCLSIHLLERRPAPPGPNGPPGPPGPPGPQGPPGIPGIPGIPGTTVMGPPGPPGPPGPQGPPGLQGPSGAADKAGAREAQPAVVHLQGQGAAIQVKNGGILNDWARVTLNPKVFKLHPRSGELEVLVEGAYFIYSQVYYINFTDFASYEVVVDEKPFLQCTRSIEPGKTNFNTCYTAGVCLLRARQKIAVKMVHADISINMSRHTTFFGAVRLGEAPAA
SIO_010081: EDA
subclass of: SO_0000673
so part of: EDA
location: join(4262907..4262936,4263672..4263852,4264163..4264197,4264352..4264403,4265511..4265626,4273035..4273286)
location: region:4262907-4273286:1
so has part: feature:4262907-4262936:1:exon
so has part: feature:4263672-4263852:1:exon
so has part: feature:4264163-4264197:1:exon
so has part: feature:4264352-4264403:1:exon
so has part: feature:4265511-4265626:1:exon
so has part: feature:4273035-4273286:1:exon

XP_038604336.1
type: Protein
SIO_000068: ncbiprotein

position:4273286:1
position: 4273286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262907-4262936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4263672-4263852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4264163-4264197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4264352-4264403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265511-4265626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4273035-4273286:1:exon

IGBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4275892..4287166
location: region:4275892-4287166:1
so has part: feature:4275892-4287166:1:exon
subclass of: SO_0000010

119929853
type: Gene
SIO_000068: ncbigene

position:4275892:1
position: 4275892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4287166:1
position: 4287166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275892-4287166:1:exon

IGBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IGBP1
product: immunoglobulin binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748188.1
SIO_010081: IGBP1
subclass of: SO_0000673
so part of: IGBP1
location: join(4275892..4276097,4278452..4278721,4281779..4281977,4283867..4283946,4284080..4284192,4286871..4287166)
location: region:4275892-4287166:1
so has part: feature:4275892-4276097:1:exon
so has part: feature:4278452-4278721:1:exon
so has part: feature:4281779-4281977:1:exon
so has part: feature:4283867-4283946:1:exon
so has part: feature:4284080-4284192:1:exon
so has part: feature:4286871-4287166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4275892-4276097:1:exon

position:4276097:1
position: 4276097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4278452-4278721:1:exon

position:4278452:1
position: 4278452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278721:1
position: 4278721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4281779-4281977:1:exon

position:4281779:1
position: 4281779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281977:1
position: 4281977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4283867-4283946:1:exon

position:4283867:1
position: 4283867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283946:1
position: 4283946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4284080-4284192:1:exon

position:4284080:1
position: 4284080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4284192:1
position: 4284192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4286871-4287166:1:exon

position:4286871:1
position: 4286871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin-binding protein 1
translation: MAEEEEAAAATSHPRLPELLEQGWQLLDEVEATSEPTGSRLVQDKVKLGLSLLDQAARMVDQLDLFSRHEDLEEVASADLKYLLVPALRGALTLKQAAPGQRLDQVQRARGHFADFLQRCRDYGLSAAEPAGRPAGPPGARPDLVAAATHRQAKIQRYKQKKEAESQLAALKEAVAAGRADEEQVRAYYLLHVQKWVGASLDEMESIDQEAEILRGRDQAGQQASTSHPPRPGRPPMRPFVLTRDAAQAKVFGLGYPSLATMTVNEWYDQHEKWGALPDQGVPRAPAGAAKEDDRDREKEEEEEEESESSLRKARGWDEWKDTNPRGYGNRQNMG
SIO_010081: IGBP1
subclass of: SO_0000673
so part of: IGBP1
location: join(4275898..4276097,4278452..4278721,4281779..4281977,4283867..4283946,4284080..4284192,4286871..4287016)
location: region:4275898-4287016:1
so has part: feature:4275898-4276097:1:exon
so has part: feature:4278452-4278721:1:exon
so has part: feature:4281779-4281977:1:exon
so has part: feature:4283867-4283946:1:exon
so has part: feature:4284080-4284192:1:exon
so has part: feature:4286871-4287016:1:exon

XP_038604116.1
type: Protein
SIO_000068: ncbiprotein

position:4275898:1
position: 4275898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4287016:1
position: 4287016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275898-4276097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4278452-4278721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4281779-4281977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4283867-4283946:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4284080-4284192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4286871-4287016:1:exon

PDZD11
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4302918..4355604)
location: region:4302918-4355604:-1
so has part: feature:4302918-4355604:-1:exon
subclass of: SO_0000010

119929988
type: Gene
SIO_000068: ncbigene

position:4302918:-1
position: 4302918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4355604:-1
position: 4355604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4302918-4355604:-1:exon

PDZD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDZD11
product: PDZ domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038748388.1
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4302918..4303364,4343410..4343470,4347824..4347922,4348024..4348080,4351349..4351487,4355556..4355604))
location: region:4302918-4355604:-1
so has part: feature:4355556-4355604:-1:exon
so has part: feature:4351349-4351487:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4302918-4303364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4355556-4355604:-1:exon

position:4355556:-1
position: 4355556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4351349-4351487:-1:exon

position:4351349:-1
position: 4351349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4351487:-1
position: 4351487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4348024-4348080:-1:exon

position:4348024:-1
position: 4348024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348080:-1
position: 4348080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4347824-4347922:-1:exon

position:4347824:-1
position: 4347824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4347922:-1
position: 4347922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4343410-4343470:-1:exon

position:4343410:-1
position: 4343410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343470:-1
position: 4343470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4302918-4303364:-1:exon

position:4303364:-1
position: 4303364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDZD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDZD11
product: PDZ domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748386.1
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4302920..4303364,4343410..4343470,4347824..4347922,4349618..4349701,4351349..4351487,4355556..4355604))
location: region:4302920-4355604:-1
so has part: feature:4355556-4355604:-1:exon
so has part: feature:4351349-4351487:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4302920-4303364:-1:exon

position:4302920:-1
position: 4302920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355556-4355604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4351349-4351487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4349618-4349701:-1:exon

position:4349618:-1
position: 4349618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349701:-1
position: 4349701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4302920-4303364:-1:exon

PDZD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDZD11
product: PDZ domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038748385.1
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4303085..4303364,4343410..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351487,4355556..4355604))
location: region:4303085-4355604:-1
so has part: feature:4355556-4355604:-1:exon
so has part: feature:4351349-4351487:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4303085-4303364:-1:exon

position:4303085:-1
position: 4303085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355556-4355604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4351349-4351487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4303085-4303364:-1:exon

PDZD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 11 isoform X4
translation: MEMDGRPPYDDYPVVFLPPYENPPAWIPPHELGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNHVDFQDIEHGKAVEILKTAREINMQVRFFPYTPPCKPSSLLQIQLLPADPSGQEPSAPRETPA
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4303267..4303364,4343410..4343470,4347824..4347922,4348024..4348080,4351349..4351441))
location: region:4303267-4351441:-1
so has part: feature:4351349-4351441:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4303267-4303364:-1:exon

XP_038604316.1
type: Protein
SIO_000068: ncbiprotein

position:4303267:-1
position: 4303267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4351441:-1
position: 4351441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351349-4351441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4303267-4303364:-1:exon

PDZD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 11 isoform X2
translation: MEMDGRPPYDDYPVVFLPPYENPPAWIPPHERVYHPDYNNELTQFLPRTIQLQKPSGAQVIPDSDAHRAGLQEGDQVLAVNHVDFQDIEHGKAVEILKTAREINMQVRFFPYTPPCKPSSLLQIQLLPADPSGQEPSAPRETPA
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4303267..4303364,4343410..4343470,4347824..4347922,4349618..4349701,4351349..4351441))
location: region:4303267-4351441:-1
so has part: feature:4351349-4351441:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4303267-4303364:-1:exon

XP_038604314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4351349-4351441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4303267-4303364:-1:exon

PDZD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 11 isoform X1
translation: MEMDGRPPYDDYPVVFLPPYENPPAWIPPHERVYHPDYNNELTQFLPRTIQLQKPSGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNHVDFQDIEHGKAVEILKTAREINMQVRFFPYTPPCKPSSLLQIQLLPADPSGQEPSAPRETPA
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4303267..4303364,4343410..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351441))
location: region:4303267-4351441:-1
so has part: feature:4351349-4351441:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4303267-4303364:-1:exon

XP_038604313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4351349-4351441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4303267-4303364:-1:exon

LOC119929987
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4310408..4324875
location: region:4310408-4324875:1
so has part: feature:4310408-4324875:1:exon
subclass of: SO_0000010

119929987
type: Gene
SIO_000068: ncbigene

position:4310408:1
position: 4310408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324875:1
position: 4324875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4310408-4324875:1:exon

LOC119929987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929987
product: START domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038748383.1
SIO_010081: LOC119929987
subclass of: SO_0000673
so part of: LOC119929987
location: join(4310408..4310930,4312460..4312607,4314291..4314394,4315656..4315773,4321850..4321902,4324589..4324875)
location: region:4310408-4324875:1
so has part: feature:4310408-4310930:1:exon
so has part: feature:4312460-4312607:1:exon
so has part: feature:4314291-4314394:1:exon
so has part: feature:4315656-4315773:1:exon
so has part: feature:4321850-4321902:1:exon
so has part: feature:4324589-4324875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4310408-4310930:1:exon

position:4310930:1
position: 4310930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4312460-4312607:1:exon

position:4312460:1
position: 4312460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4312607:1
position: 4312607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4314291-4314394:1:exon

position:4314291:1
position: 4314291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4314394:1
position: 4314394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4315656-4315773:1:exon

position:4315656:1
position: 4315656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4315773:1
position: 4315773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4321850-4321902:1:exon

position:4321850:1
position: 4321850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4321902:1
position: 4321902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4324589-4324875:1:exon

position:4324589:1
position: 4324589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119929987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: START domain-containing protein 10-like
translation: MPRTTWWSVPGPPPGPSDRSQAAVHKIKGCVTIGDVPIETVYDVLHDQEYRKTWDITMLDSFDIARINNTTDVGYYAWKCPKPMKNRDVVTLRTWKVTDNTCMIINFSVTHPNYPPRKDMVRAVSILTGYLLLSTGPRSCHLTYLAQLDPKGSLPPWVINKASQCVAPMMLRKLQKASRSYPAWKREHGQHVKPWRYPEQCTLPVISVGQLRHGGGPDPAGEPRD
SIO_010081: LOC119929987
subclass of: SO_0000673
so part of: LOC119929987
location: join(4310847..4310930,4312460..4312607,4314291..4314394,4315656..4315773,4321850..4321902,4324589..4324759)
location: region:4310847-4324759:1
so has part: feature:4310847-4310930:1:exon
so has part: feature:4312460-4312607:1:exon
so has part: feature:4314291-4314394:1:exon
so has part: feature:4315656-4315773:1:exon
so has part: feature:4321850-4321902:1:exon
so has part: feature:4324589-4324759:1:exon

XP_038604311.1
type: Protein
SIO_000068: ncbiprotein

position:4310847:1
position: 4310847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324759:1
position: 4324759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4310847-4310930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4312460-4312607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4314291-4314394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4315656-4315773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4321850-4321902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4324589-4324759:1:exon

PDZD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDZD11
product: PDZ domain containing 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038748389.1
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4331094..4331288,4343433..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351487,4355556..4355604))
location: region:4331094-4355604:-1
so has part: feature:4355556-4355604:-1:exon
so has part: feature:4351349-4351487:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343433-4343470:-1:exon
so has part: feature:4331094-4331288:-1:exon

position:4331094:-1
position: 4331094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355556-4355604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4351349-4351487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4343433-4343470:-1:exon

position:4343433:-1
position: 4343433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4331094-4331288:-1:exon

position:4331288:-1
position: 4331288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDZD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: PDZD11
product: PDZ domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748387.1
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4331094..4331288,4343410..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351487,4355556..4355604))
location: region:4331094-4355604:-1
so has part: feature:4355556-4355604:-1:exon
so has part: feature:4351349-4351487:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4331094-4331288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4355556-4355604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4351349-4351487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4331094-4331288:-1:exon

PDZD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 11 isoform X3
translation: MEMDGRPPYDDYPVVFLPPYENPPAWIPPHERVYHPDYNNELTQFLPRTIQLQKPSGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNHVDFQDIEHGKAVEILKTAREINMQVRFFPYNYNRQKERTVH
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4331254..4331288,4343410..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351441))
location: region:4331254-4351441:-1
so has part: feature:4351349-4351441:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343410-4343470:-1:exon
so has part: feature:4331254-4331288:-1:exon

XP_038604315.1
type: Protein
SIO_000068: ncbiprotein

position:4331254:-1
position: 4331254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351349-4351441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4343410-4343470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4331254-4331288:-1:exon

PDZD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: PDZD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 11 isoform X5
translation: MEMDGRPPYDDYPVVFLPPYENPPAWIPPHERVYHPDYNNELTQFLPRTIQLQKPSGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNHVDFQDIEHGKAVEILKTAREINIL
SIO_010081: PDZD11
subclass of: SO_0000673
so part of: PDZD11
location: complement(join(4331282..4331288,4343433..4343470,4347824..4347922,4348024..4348080,4349618..4349701,4351349..4351441))
location: region:4331282-4351441:-1
so has part: feature:4351349-4351441:-1:exon
so has part: feature:4349618-4349701:-1:exon
so has part: feature:4348024-4348080:-1:exon
so has part: feature:4347824-4347922:-1:exon
so has part: feature:4343433-4343470:-1:exon
so has part: feature:4331282-4331288:-1:exon

XP_038604317.1
type: Protein
SIO_000068: ncbiprotein

position:4331282:-1
position: 4331282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351349-4351441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4349618-4349701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4348024-4348080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347824-4347922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4343433-4343470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4331282-4331288:-1:exon

KIF4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: KIF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4355953..4431327
location: region:4355953-4431327:1
so has part: feature:4355953-4431327:1:exon
subclass of: SO_0000010

119929732
type: Gene
SIO_000068: ncbigene

position:4355953:1
position: 4355953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4431327:1
position: 4431327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355953-4431327:1:exon

KIF4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: KIF4A
product: kinesin family member 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038747981.1
SIO_010081: KIF4A
subclass of: SO_0000673
so part of: KIF4A
location: join(4355953..4356075,4358251..4358365,4359485..4359675,4363951..4364043,4368874..4369040,4371713..4371807,4371901..4372017,4377585..4377760,4382188..4382249,4385311..4385443,4394431..4394489,4396135..4396240,4397518..4397574,4399120..4399302,4399383..4399486,4399948..4400092,4403853..4403963,4406059..4406142,4406411..4406524,4408550..4408705,4410364..4410458,4414021..4414150,4417190..4417360,4420834..4420941,4421583..4421660,4422957..4423055,4423153..4423305,4425972..4426103,4430644..4430766,4430997..4431327)
location: region:4355953-4431327:1
so has part: feature:4355953-4356075:1:exon
so has part: feature:4358251-4358365:1:exon
so has part: feature:4359485-4359675:1:exon
so has part: feature:4363951-4364043:1:exon
so has part: feature:4368874-4369040:1:exon
so has part: feature:4371713-4371807:1:exon
so has part: feature:4371901-4372017:1:exon
so has part: feature:4377585-4377760:1:exon
so has part: feature:4382188-4382249:1:exon
so has part: feature:4385311-4385443:1:exon
so has part: feature:4394431-4394489:1:exon
so has part: feature:4396135-4396240:1:exon
so has part: feature:4397518-4397574:1:exon
so has part: feature:4399120-4399302:1:exon
so has part: feature:4399383-4399486:1:exon
so has part: feature:4399948-4400092:1:exon
so has part: feature:4403853-4403963:1:exon
so has part: feature:4406059-4406142:1:exon
so has part: feature:4406411-4406524:1:exon
so has part: feature:4408550-4408705:1:exon
so has part: feature:4410364-4410458:1:exon
so has part: feature:4414021-4414150:1:exon
so has part: feature:4417190-4417360:1:exon
so has part: feature:4420834-4420941:1:exon
so has part: feature:4421583-4421660:1:exon
so has part: feature:4422957-4423055:1:exon
so has part: feature:4423153-4423305:1:exon
so has part: feature:4425972-4426103:1:exon
so has part: feature:4430644-4430766:1:exon
so has part: feature:4430997-4431327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4355953-4356075:1:exon

position:4356075:1
position: 4356075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4358251-4358365:1:exon

position:4358251:1
position: 4358251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4358365:1
position: 4358365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4359485-4359675:1:exon

position:4359485:1
position: 4359485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4359675:1
position: 4359675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4363951-4364043:1:exon

position:4363951:1
position: 4363951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4364043:1
position: 4364043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4368874-4369040:1:exon

position:4368874:1
position: 4368874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4369040:1
position: 4369040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4371713-4371807:1:exon

position:4371713:1
position: 4371713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4371807:1
position: 4371807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4371901-4372017:1:exon

position:4371901:1
position: 4371901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4372017:1
position: 4372017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4377585-4377760:1:exon

position:4377585:1
position: 4377585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4377760:1
position: 4377760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4382188-4382249:1:exon

position:4382188:1
position: 4382188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4382249:1
position: 4382249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4385311-4385443:1:exon

position:4385311:1
position: 4385311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4385443:1
position: 4385443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4394431-4394489:1:exon

position:4394431:1
position: 4394431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4394489:1
position: 4394489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4396135-4396240:1:exon

position:4396135:1
position: 4396135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4396240:1
position: 4396240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4397518-4397574:1:exon

position:4397518:1
position: 4397518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4397574:1
position: 4397574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4399120-4399302:1:exon

position:4399120:1
position: 4399120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399302:1
position: 4399302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4399383-4399486:1:exon

position:4399383:1
position: 4399383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399486:1
position: 4399486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4399948-4400092:1:exon

position:4399948:1
position: 4399948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400092:1
position: 4400092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4403853-4403963:1:exon

position:4403853:1
position: 4403853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4403963:1
position: 4403963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4406059-4406142:1:exon

position:4406059:1
position: 4406059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406142:1
position: 4406142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4406411-4406524:1:exon

position:4406411:1
position: 4406411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406524:1
position: 4406524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4408550-4408705:1:exon

position:4408550:1
position: 4408550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4408705:1
position: 4408705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4410364-4410458:1:exon

position:4410364:1
position: 4410364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410458:1
position: 4410458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4414021-4414150:1:exon

position:4414021:1
position: 4414021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4414150:1
position: 4414150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4417190-4417360:1:exon

position:4417190:1
position: 4417190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417360:1
position: 4417360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4420834-4420941:1:exon

position:4420834:1
position: 4420834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4420941:1
position: 4420941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4421583-4421660:1:exon

position:4421583:1
position: 4421583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4421660:1
position: 4421660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4422957-4423055:1:exon

position:4422957:1
position: 4422957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4423055:1
position: 4423055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4423153-4423305:1:exon

position:4423153:1
position: 4423153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4423305:1
position: 4423305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4425972-4426103:1:exon

position:4425972:1
position: 4425972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4426103:1
position: 4426103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4430644-4430766:1:exon

position:4430644:1
position: 4430644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4430766:1
position: 4430766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4430997-4431327:1:exon

position:4430997:1
position: 4430997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: KIF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome-associated kinesin KIF4A
translation: MGKEDDKGIPVRVALRCRPLVPKELAEGCQACLAFVPGEPQVVVGTDKSFTYDFVFDPTTEQEEVFTSAVAPLVRGVFKGYNATVLAYGQTGSGKTYSMGGAYTADQEREPSVGVIPRVIQLLFREIERRADTDFTTKVSYLEIYNEEILDLLCPARDKSSQINIREDPKQGIKIVGLTEKAVGSGPEMVRCLEQGNTGRTVASTAMNSQSSRSHAIFTISIEQRKRSDKSGSFCSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTVMIACVSPADSNLEETLNTLRYADRARKIKNKPVVNVDPQTAELHHLKQQVQQLQVLLLQAHGGTLPAAVNEAPSENLQSLMERNRCLSEENEQLSRGLSEAAGQTAQMLERIILTEQANDKMNAKLEGLKQHAACKLDLQKLAETSADGELREEVEVIRDLQQLITQLSDETATCVAAGIDAAGEMEPAGATPDASGCADAFSTQHALRQAQMSKELGELNQALALKEALARKMTQNDHRLQPIQSQYQDNMKSLEAEVASLQKEKEDLLLALHSAKKDANQAKLSERRRKRLLELEGQMGELRKKLGDQAKLLKLKESTEHTVFKLNQEIRTMKSQRVQLMRQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELLKLERDFQKQSSVLRRKTEEAAAANKRLKDALQKQQEVAEKRKESQSRGMEGTAARVKSWLANEVEVLVSTEEAKRHLHELLGDRKTLAQDLALLKQKKEAGENPPPKLRRRTYSVTDLKIPETEASITKQIESLETEMELRSAQIADLQQKLLDADSEDRAKQRWESIATILEAKCALKYLTGELVASKVEVSRMEGRLRQSNASCGEIHKMLSEERAQAAQAEADLQGALVRLEQEHQEKVLYLLSQLQQSQAAEARLEESGSEREQQLLDRLRFQDEELEKMRGVCEQNQRLLQENDAMKQKLTLLQVASGQKLSIPRAIGPSPDSSYEYVPPKPKPSRAARERAREQSVALDDLLSPSAPSDSEDDADWKPRRAARAAKRSTAGCSCKGWCRNKQCGCRKQKANCNHHCSCDAARCRNREAENSSSSPESTTFPEPLPDPEISLNLEGPLDVSGRASFFNPPFVTPNSKLLQEMTVLGQGLPGTSLRKKGPPGPDPEDPPDSGVFPRKKRSQRALISNSSFFSGCTPIEEEGGP
SIO_010081: KIF4A
subclass of: SO_0000673
so part of: KIF4A
location: join(4355953..4356075,4358251..4358365,4359485..4359675,4363951..4364043,4368874..4369040,4371713..4371807,4371901..4372017,4377585..4377760,4382188..4382249,4385311..4385443,4394431..4394489,4396135..4396240,4397518..4397574,4399120..4399302,4399383..4399486,4399948..4400092,4403853..4403963,4406059..4406142,4406411..4406524,4408550..4408705,4410364..4410458,4414021..4414150,4417190..4417360,4420834..4420941,4421583..4421660,4422957..4423055,4423153..4423305,4425972..4426103,4430644..4430766,4430997..4431194)
location: region:4355953-4431194:1
so has part: feature:4355953-4356075:1:exon
so has part: feature:4358251-4358365:1:exon
so has part: feature:4359485-4359675:1:exon
so has part: feature:4363951-4364043:1:exon
so has part: feature:4368874-4369040:1:exon
so has part: feature:4371713-4371807:1:exon
so has part: feature:4371901-4372017:1:exon
so has part: feature:4377585-4377760:1:exon
so has part: feature:4382188-4382249:1:exon
so has part: feature:4385311-4385443:1:exon
so has part: feature:4394431-4394489:1:exon
so has part: feature:4396135-4396240:1:exon
so has part: feature:4397518-4397574:1:exon
so has part: feature:4399120-4399302:1:exon
so has part: feature:4399383-4399486:1:exon
so has part: feature:4399948-4400092:1:exon
so has part: feature:4403853-4403963:1:exon
so has part: feature:4406059-4406142:1:exon
so has part: feature:4406411-4406524:1:exon
so has part: feature:4408550-4408705:1:exon
so has part: feature:4410364-4410458:1:exon
so has part: feature:4414021-4414150:1:exon
so has part: feature:4417190-4417360:1:exon
so has part: feature:4420834-4420941:1:exon
so has part: feature:4421583-4421660:1:exon
so has part: feature:4422957-4423055:1:exon
so has part: feature:4423153-4423305:1:exon
so has part: feature:4425972-4426103:1:exon
so has part: feature:4430644-4430766:1:exon
so has part: feature:4430997-4431194:1:exon

XP_038603909.1
type: Protein
SIO_000068: ncbiprotein

position:4431194:1
position: 4431194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355953-4356075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4358251-4358365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4359485-4359675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4363951-4364043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4368874-4369040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4371713-4371807:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4371901-4372017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4377585-4377760:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4382188-4382249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4385311-4385443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4394431-4394489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4396135-4396240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4397518-4397574:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4399120-4399302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4399383-4399486:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4399948-4400092:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4403853-4403963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4406059-4406142:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4406411-4406524:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4408550-4408705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4410364-4410458:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4414021-4414150:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4417190-4417360:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4420834-4420941:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4421583-4421660:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4422957-4423055:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4423153-4423305:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4425972-4426103:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4430644-4430766:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4430997-4431194:1:exon

KIF4A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9261
gene: KIF4A
product: kinesin family member 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005451586.1
SIO_010081: KIF4A
so part of: KIF4A
location: join(4355953..4356075,4358251..4358365,4359485..4359675,4363951..4364043,4368874..4369040,4371713..4371807,4371901..4372017,4377585..4377760,4382188..4382249,4385311..4385443,4394431..4394489,4396135..4396240,4397518..4397574,4399120..4399302,4399383..4399486,4399948..4400092,4403853..4403963,4406059..4406142,4406411..4406524,4408550..4408705,4410364..4410458,4414021..4414150,4417190..4417360,4420834..4420941,4421583..4421660,4422957..4423055,4423172..4423305,4425972..4426103,4430644..4430766,4430997..4431085)
location: region:4355953-4431085:1
so has part: feature:4355953-4356075:1:exon
so has part: feature:4358251-4358365:1:exon
so has part: feature:4359485-4359675:1:exon
so has part: feature:4363951-4364043:1:exon
so has part: feature:4368874-4369040:1:exon
so has part: feature:4371713-4371807:1:exon
so has part: feature:4371901-4372017:1:exon
so has part: feature:4377585-4377760:1:exon
so has part: feature:4382188-4382249:1:exon
so has part: feature:4385311-4385443:1:exon
so has part: feature:4394431-4394489:1:exon
so has part: feature:4396135-4396240:1:exon
so has part: feature:4397518-4397574:1:exon
so has part: feature:4399120-4399302:1:exon
so has part: feature:4399383-4399486:1:exon
so has part: feature:4399948-4400092:1:exon
so has part: feature:4403853-4403963:1:exon
so has part: feature:4406059-4406142:1:exon
so has part: feature:4406411-4406524:1:exon
so has part: feature:4408550-4408705:1:exon
so has part: feature:4410364-4410458:1:exon
so has part: feature:4414021-4414150:1:exon
so has part: feature:4417190-4417360:1:exon
so has part: feature:4420834-4420941:1:exon
so has part: feature:4421583-4421660:1:exon
so has part: feature:4422957-4423055:1:exon
so has part: feature:4423172-4423305:1:exon
so has part: feature:4425972-4426103:1:exon
so has part: feature:4430644-4430766:1:exon
so has part: feature:4430997-4431085:1:exon

position:4431085:1
position: 4431085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355953-4356075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4358251-4358365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4359485-4359675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4363951-4364043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4368874-4369040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4371713-4371807:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4371901-4372017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4377585-4377760:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4382188-4382249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4385311-4385443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4394431-4394489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4396135-4396240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4397518-4397574:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4399120-4399302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4399383-4399486:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4399948-4400092:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4403853-4403963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4406059-4406142:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4406411-4406524:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4408550-4408705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4410364-4410458:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4414021-4414150:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4417190-4417360:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4420834-4420941:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4421583-4421660:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4422957-4423055:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4423172-4423305:1:exon

position:4423172:1
position: 4423172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4425972-4426103:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4430644-4430766:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4430997-4431085:1:exon

GDPD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GDPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4469291..4493617
location: region:4469291-4493617:1
so has part: feature:4469291-4493617:1:exon
subclass of: SO_0000010

119929933
type: Gene
SIO_000068: ncbigene

position:4469291:1
position: 4469291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493617:1
position: 4493617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469291-4493617:1:exon

GDPD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GDPD2
product: glycerophosphodiester phosphodiesterase domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748300.1
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: join(4469291..4469550,4471106..4471209,4471300..4471393,4471651..4471710,4471935..4472033,4473379..4473472,4473589..4473731,4475258..4475340,4475417..4475558,4478149..4478370,4479291..4479469,4481310..4481457,4493074..4493156,4493255..4493283,4493363..4493617)
location: region:4469291-4493617:1
so has part: feature:4469291-4469550:1:exon
so has part: feature:4471106-4471209:1:exon
so has part: feature:4471300-4471393:1:exon
so has part: feature:4471651-4471710:1:exon
so has part: feature:4471935-4472033:1:exon
so has part: feature:4473379-4473472:1:exon
so has part: feature:4473589-4473731:1:exon
so has part: feature:4475258-4475340:1:exon
so has part: feature:4475417-4475558:1:exon
so has part: feature:4478149-4478370:1:exon
so has part: feature:4479291-4479469:1:exon
so has part: feature:4481310-4481457:1:exon
so has part: feature:4493074-4493156:1:exon
so has part: feature:4493255-4493283:1:exon
so has part: feature:4493363-4493617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469291-4469550:1:exon

position:4469550:1
position: 4469550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4471106-4471209:1:exon

position:4471106:1
position: 4471106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4471209:1
position: 4471209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4471300-4471393:1:exon

position:4471300:1
position: 4471300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4471393:1
position: 4471393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4471651-4471710:1:exon

position:4471651:1
position: 4471651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4471710:1
position: 4471710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4471935-4472033:1:exon

position:4471935:1
position: 4471935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4472033:1
position: 4472033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4473379-4473472:1:exon

position:4473379:1
position: 4473379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4473472:1
position: 4473472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4473589-4473731:1:exon

position:4473589:1
position: 4473589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4473731:1
position: 4473731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4475258-4475340:1:exon

position:4475258:1
position: 4475258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4475340:1
position: 4475340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4475417-4475558:1:exon

position:4475417:1
position: 4475417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4475558:1
position: 4475558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4478149-4478370:1:exon

position:4478149:1
position: 4478149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4478370:1
position: 4478370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4479291-4479469:1:exon

position:4479291:1
position: 4479291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4479469:1
position: 4479469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4481310-4481457:1:exon

position:4481310:1
position: 4481310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4481457:1
position: 4481457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4493074-4493156:1:exon

position:4493074:1
position: 4493074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493156:1
position: 4493156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4493255-4493283:1:exon

position:4493255:1
position: 4493255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493283:1
position: 4493283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4493363-4493617:1:exon

position:4493363:1
position: 4493363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDPD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GDPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphoinositol inositolphosphodiesterase GDPD2
translation: MAEASAWRSGCARGLSSLYSCRWRGSKTPETTQCDRVWLGLLSATCLLAVGWLYVSLVLLNDLHNFNEFLFRNWGHWLDWSWVLLLVASLLVVYSSVLLLLALLLVLCGKPLRLHWLHKGLLLLTVAVVGAGLLLLELRWREEWDSLRLSLKATGPFLHVGGVAALTLLAWPLADAYYGTPRTGSGPLLGLFLGSALVLYLLPLGISSPCIMEPAQLPPKPALVGHRGAPMLAPENTLMSLRKTAECGARVFETDVMVSSDGVPFLMHDERLVRTTNVAPEWANEHSSNLSWKELQTLNAGAWFLQRRPFWGSPALSEGERLEAGNQSVPALGRALREAAALHLAVMFDLRRPPAHHAHRHDFVQRTLGAVLDSGVPQNTVLWLPDEERAEVQRQAPGVQHIYGRHGTPGALPETPNVSHGPPGHGLNLPYQDLLRLDLPALHRDNVTVNLFVVDAPWLFSLLWCSAVDSVTTNACQRLQPLRRPLWMMRPRTYQLVWVATDFISALLLLCVFCVQRRRARQRQRRGPESTVLLTRIDSLGSSASSSSPGSPTATEETPRPPDGP
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: join(4469452..4469550,4471106..4471209,4471300..4471393,4471651..4471710,4471935..4472033,4473379..4473472,4473589..4473731,4475258..4475340,4475417..4475558,4478149..4478370,4479291..4479469,4481310..4481457,4493074..4493156,4493255..4493283,4493363..4493481)
location: region:4469452-4493481:1
so has part: feature:4469452-4469550:1:exon
so has part: feature:4471106-4471209:1:exon
so has part: feature:4471300-4471393:1:exon
so has part: feature:4471651-4471710:1:exon
so has part: feature:4471935-4472033:1:exon
so has part: feature:4473379-4473472:1:exon
so has part: feature:4473589-4473731:1:exon
so has part: feature:4475258-4475340:1:exon
so has part: feature:4475417-4475558:1:exon
so has part: feature:4478149-4478370:1:exon
so has part: feature:4479291-4479469:1:exon
so has part: feature:4481310-4481457:1:exon
so has part: feature:4493074-4493156:1:exon
so has part: feature:4493255-4493283:1:exon
so has part: feature:4493363-4493481:1:exon

XP_038604228.1
type: Protein
SIO_000068: ncbiprotein

position:4469452:1
position: 4469452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493481:1
position: 4493481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469452-4469550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4471106-4471209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4471300-4471393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4471651-4471710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4471935-4472033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4473379-4473472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4473589-4473731:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4475258-4475340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4475417-4475558:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4478149-4478370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4479291-4479469:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4481310-4481457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4493074-4493156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4493255-4493283:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4493363-4493481:1:exon

DLG3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: DLG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4500743..4596720
location: region:4500743-4596720:1
so has part: feature:4500743-4596720:1:exon
subclass of: SO_0000010

119929822
type: Gene
SIO_000068: ncbigene

position:4500743:1
position: 4500743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4596720:1
position: 4596720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500743-4596720:1:exon

DLG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DLG3
product: discs large MAGUK scaffold protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748132.1
SIO_010081: DLG3
subclass of: SO_0000673
so part of: DLG3
location: join(4500743..4500791,4516174..4516227,4516997..4517050,4518125..4518249,4523389..4523558,4525739..4525875,4526149..4526341,4527714..4527873,4536912..4537068,4538960..4539062,4562070..4562184,4564375..4564551,4569156..4569231,4576386..4576485,4582139..4582180,4583655..4583705,4586541..4586642,4588097..4588269,4591629..4591738,4596395..4596486,4596589..4596720)
location: region:4500743-4596720:1
so has part: feature:4500743-4500791:1:exon
so has part: feature:4516174-4516227:1:exon
so has part: feature:4516997-4517050:1:exon
so has part: feature:4518125-4518249:1:exon
so has part: feature:4523389-4523558:1:exon
so has part: feature:4525739-4525875:1:exon
so has part: feature:4526149-4526341:1:exon
so has part: feature:4527714-4527873:1:exon
so has part: feature:4536912-4537068:1:exon
so has part: feature:4538960-4539062:1:exon
so has part: feature:4562070-4562184:1:exon
so has part: feature:4564375-4564551:1:exon
so has part: feature:4569156-4569231:1:exon
so has part: feature:4576386-4576485:1:exon
so has part: feature:4582139-4582180:1:exon
so has part: feature:4583655-4583705:1:exon
so has part: feature:4586541-4586642:1:exon
so has part: feature:4588097-4588269:1:exon
so has part: feature:4591629-4591738:1:exon
so has part: feature:4596395-4596486:1:exon
so has part: feature:4596589-4596720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4500743-4500791:1:exon

position:4500791:1
position: 4500791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4516174-4516227:1:exon

position:4516174:1
position: 4516174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4516227:1
position: 4516227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4516997-4517050:1:exon

position:4516997:1
position: 4516997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4517050:1
position: 4517050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4518125-4518249:1:exon

position:4518125:1
position: 4518125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4518249:1
position: 4518249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4523389-4523558:1:exon

position:4523389:1
position: 4523389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4523558:1
position: 4523558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4525739-4525875:1:exon

position:4525739:1
position: 4525739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525875:1
position: 4525875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4526149-4526341:1:exon

position:4526149:1
position: 4526149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4526341:1
position: 4526341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4527714-4527873:1:exon

position:4527714:1
position: 4527714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527873:1
position: 4527873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4536912-4537068:1:exon

position:4536912:1
position: 4536912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537068:1
position: 4537068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4538960-4539062:1:exon

position:4538960:1
position: 4538960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539062:1
position: 4539062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4562070-4562184:1:exon

position:4562070:1
position: 4562070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4562184:1
position: 4562184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4564375-4564551:1:exon

position:4564375:1
position: 4564375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4564551:1
position: 4564551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4569156-4569231:1:exon

position:4569156:1
position: 4569156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4569231:1
position: 4569231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4576386-4576485:1:exon

position:4576386:1
position: 4576386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4576485:1
position: 4576485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4582139-4582180:1:exon

position:4582139:1
position: 4582139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4582180:1
position: 4582180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4583655-4583705:1:exon

position:4583655:1
position: 4583655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4583705:1
position: 4583705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4586541-4586642:1:exon

position:4586541:1
position: 4586541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586642:1
position: 4586642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4588097-4588269:1:exon

position:4588097:1
position: 4588097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588269:1
position: 4588269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4591629-4591738:1:exon

position:4591629:1
position: 4591629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4591738:1
position: 4591738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4596395-4596486:1:exon

position:4596395:1
position: 4596395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4596486:1
position: 4596486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4596589-4596720:1:exon

position:4596589:1
position: 4596589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: DLG3
product: discs large MAGUK scaffold protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038748133.1
SIO_010081: DLG3
subclass of: SO_0000673
so part of: DLG3
location: join(4500743..4500791,4516174..4516227,4516997..4517050,4518125..4518249,4523389..4523558,4525739..4525875,4526149..4526341,4527714..4527873,4536912..4537068,4538960..4539062,4562070..4562184,4564375..4564551,4569156..4569231,4581519..4581564,4582139..4582180,4583655..4583705,4586541..4586642,4588097..4588269,4591629..4591738,4596395..4596486,4596589..4596695)
location: region:4500743-4596695:1
so has part: feature:4500743-4500791:1:exon
so has part: feature:4516174-4516227:1:exon
so has part: feature:4516997-4517050:1:exon
so has part: feature:4518125-4518249:1:exon
so has part: feature:4523389-4523558:1:exon
so has part: feature:4525739-4525875:1:exon
so has part: feature:4526149-4526341:1:exon
so has part: feature:4527714-4527873:1:exon
so has part: feature:4536912-4537068:1:exon
so has part: feature:4538960-4539062:1:exon
so has part: feature:4562070-4562184:1:exon
so has part: feature:4564375-4564551:1:exon
so has part: feature:4569156-4569231:1:exon
so has part: feature:4581519-4581564:1:exon
so has part: feature:4582139-4582180:1:exon
so has part: feature:4583655-4583705:1:exon
so has part: feature:4586541-4586642:1:exon
so has part: feature:4588097-4588269:1:exon
so has part: feature:4591629-4591738:1:exon
so has part: feature:4596395-4596486:1:exon
so has part: feature:4596589-4596695:1:exon

position:4596695:1
position: 4596695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500743-4500791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4516174-4516227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4516997-4517050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4518125-4518249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4523389-4523558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4525739-4525875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4526149-4526341:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4527714-4527873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4536912-4537068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4538960-4539062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4562070-4562184:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4564375-4564551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4569156-4569231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4581519-4581564:1:exon

position:4581519:1
position: 4581519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4581564:1
position: 4581564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4582139-4582180:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4583655-4583705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4586541-4586642:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4588097-4588269:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4591629-4591738:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4596395-4596486:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4596589-4596695:1:exon

DLG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DLG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3 isoform X1
translation: MHLLRTRLPSMAPTLINADALDPGLSVNGGSNGFFKYEEIVLERGNSGLGFSIAGGMDNPHIPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLIIRRRQLPPETVTEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGSAQKDGRLQIGDRLLAVNNTDLQDVRHEEAVASLKNTSDMVYLKVAKPGGGPGGGGPGAPGGFGAGGHLDDMYAPPDYASTFAALPDNHISHNPGLAYLGAMEGRPTYPAPTPAPPPRYSPTPRHLLGDDDFTREPRKVILHKGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAVALKRAGQTVTIMAQYRPEEYSRFESKIHDLREQMMSSSMSSGSGSLRTSEKRSLYVRALFDYDRSRDSCLPSQGLSFSYGDILHVVNASDDEWWQARLVTPRGEGEQIGVIPSKKRVEKKERARLKTVKFHARTGMIEANRSIKTKRKKSFRLSRKFPFYKSKENVAHESGGPEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPVKDRVNDDLISEFPHKFGSCVPHTTRPRRENEVDGQDYHFVASREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKRCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKVYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWIASAEKL
SIO_010081: DLG3
subclass of: SO_0000673
so part of: DLG3
location: join(4500768..4500791,4516174..4516227,4516997..4517050,4518125..4518249,4523389..4523558,4525739..4525875,4526149..4526341,4527714..4527873,4536912..4537068,4538960..4539062,4562070..4562184,4564375..4564551,4569156..4569231,4576386..4576485,4582139..4582180,4583655..4583705,4586541..4586642,4588097..4588269,4591629..4591738,4596395..4596486,4596589..4596695)
location: region:4500768-4596695:1
so has part: feature:4500768-4500791:1:exon
so has part: feature:4516174-4516227:1:exon
so has part: feature:4516997-4517050:1:exon
so has part: feature:4518125-4518249:1:exon
so has part: feature:4523389-4523558:1:exon
so has part: feature:4525739-4525875:1:exon
so has part: feature:4526149-4526341:1:exon
so has part: feature:4527714-4527873:1:exon
so has part: feature:4536912-4537068:1:exon
so has part: feature:4538960-4539062:1:exon
so has part: feature:4562070-4562184:1:exon
so has part: feature:4564375-4564551:1:exon
so has part: feature:4569156-4569231:1:exon
so has part: feature:4576386-4576485:1:exon
so has part: feature:4582139-4582180:1:exon
so has part: feature:4583655-4583705:1:exon
so has part: feature:4586541-4586642:1:exon
so has part: feature:4588097-4588269:1:exon
so has part: feature:4591629-4591738:1:exon
so has part: feature:4596395-4596486:1:exon
so has part: feature:4596589-4596695:1:exon

XP_038604060.1
type: Protein
SIO_000068: ncbiprotein

position:4500768:1
position: 4500768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500768-4500791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4516174-4516227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4516997-4517050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4518125-4518249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4523389-4523558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4525739-4525875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4526149-4526341:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4527714-4527873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4536912-4537068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4538960-4539062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4562070-4562184:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4564375-4564551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4569156-4569231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4576386-4576485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4582139-4582180:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4583655-4583705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4586541-4586642:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4588097-4588269:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4591629-4591738:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4596395-4596486:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4596589-4596695:1:exon

DLG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: DLG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3 isoform X2
translation: MHLLRTRLPSMAPTLINADALDPGLSVNGGSNGFFKYEEIVLERGNSGLGFSIAGGMDNPHIPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLIIRRRQLPPETVTEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGSAQKDGRLQIGDRLLAVNNTDLQDVRHEEAVASLKNTSDMVYLKVAKPGGGPGGGGPGAPGGFGAGGHLDDMYAPPDYASTFAALPDNHISHNPGLAYLGAMEGRPTYPAPTPAPPPRYSPTPRHLLGDDDFTREPRKVILHKGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAVALKRAGQTVTIMAQYRPEEYSRFESKIHDLREQMMSSSMSSGSGSLRTSEKRSLYVRALFDYDRSRDSCLPSQGLSFSYGDILHVVNASDDEWWQARLVTPRGEGEQIGVIPSKKRVEKKERARLKTVKFHARTGMIEANRDFPGLSDDYYGAKNLKGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPVKDRVNDDLISEFPHKFGSCVPHTTRPRRENEVDGQDYHFVASREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKRCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKVYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWIASAEKL
SIO_010081: DLG3
subclass of: SO_0000673
so part of: DLG3
location: join(4500768..4500791,4516174..4516227,4516997..4517050,4518125..4518249,4523389..4523558,4525739..4525875,4526149..4526341,4527714..4527873,4536912..4537068,4538960..4539062,4562070..4562184,4564375..4564551,4569156..4569231,4581519..4581564,4582139..4582180,4583655..4583705,4586541..4586642,4588097..4588269,4591629..4591738,4596395..4596486,4596589..4596695)
location: region:4500768-4596695:1
so has part: feature:4500768-4500791:1:exon
so has part: feature:4516174-4516227:1:exon
so has part: feature:4516997-4517050:1:exon
so has part: feature:4518125-4518249:1:exon
so has part: feature:4523389-4523558:1:exon
so has part: feature:4525739-4525875:1:exon
so has part: feature:4526149-4526341:1:exon
so has part: feature:4527714-4527873:1:exon
so has part: feature:4536912-4537068:1:exon
so has part: feature:4538960-4539062:1:exon
so has part: feature:4562070-4562184:1:exon
so has part: feature:4564375-4564551:1:exon
so has part: feature:4569156-4569231:1:exon
so has part: feature:4581519-4581564:1:exon
so has part: feature:4582139-4582180:1:exon
so has part: feature:4583655-4583705:1:exon
so has part: feature:4586541-4586642:1:exon
so has part: feature:4588097-4588269:1:exon
so has part: feature:4591629-4591738:1:exon
so has part: feature:4596395-4596486:1:exon
so has part: feature:4596589-4596695:1:exon

XP_038604061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4500768-4500791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4516174-4516227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4516997-4517050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4518125-4518249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4523389-4523558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4525739-4525875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4526149-4526341:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4527714-4527873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4536912-4537068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4538960-4539062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4562070-4562184:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4564375-4564551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4569156-4569231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4581519-4581564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4582139-4582180:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4583655-4583705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4586541-4586642:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4588097-4588269:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4591629-4591738:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4596395-4596486:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4596589-4596695:1:exon

SLC7A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC7A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4623075..4642872)
location: region:4623075-4642872:-1
so has part: feature:4623075-4642872:-1:exon
subclass of: SO_0000010

119929905
type: Gene
SIO_000068: ncbigene

position:4623075:-1
position: 4623075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4642872:-1
position: 4642872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4623075-4642872:-1:exon

SLC7A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC7A3
product: solute carrier family 7 member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748254.1
SIO_010081: SLC7A3
subclass of: SO_0000673
so part of: SLC7A3
location: complement(join(4623075..4623296,4623376..4623484,4625721..4625887,4625967..4626163,4634854..4634956,4637050..4637189,4637303..4637525,4637766..4637878,4639109..4639286,4639420..4639578,4642485..4642872))
location: region:4623075-4642872:-1
so has part: feature:4642485-4642872:-1:exon
so has part: feature:4639420-4639578:-1:exon
so has part: feature:4639109-4639286:-1:exon
so has part: feature:4637766-4637878:-1:exon
so has part: feature:4637303-4637525:-1:exon
so has part: feature:4637050-4637189:-1:exon
so has part: feature:4634854-4634956:-1:exon
so has part: feature:4625967-4626163:-1:exon
so has part: feature:4625721-4625887:-1:exon
so has part: feature:4623376-4623484:-1:exon
so has part: feature:4623075-4623296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4642485-4642872:-1:exon

position:4642485:-1
position: 4642485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4639420-4639578:-1:exon

position:4639420:-1
position: 4639420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4639578:-1
position: 4639578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4639109-4639286:-1:exon

position:4639109:-1
position: 4639109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4639286:-1
position: 4639286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4637766-4637878:-1:exon

position:4637766:-1
position: 4637766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637878:-1
position: 4637878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4637303-4637525:-1:exon

position:4637303:-1
position: 4637303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637525:-1
position: 4637525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4637050-4637189:-1:exon

position:4637050:-1
position: 4637050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637189:-1
position: 4637189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4634854-4634956:-1:exon

position:4634854:-1
position: 4634854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4634956:-1
position: 4634956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4625967-4626163:-1:exon

position:4625967:-1
position: 4625967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4626163:-1
position: 4626163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4625721-4625887:-1:exon

position:4625721:-1
position: 4625721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625887:-1
position: 4625887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4623376-4623484:-1:exon

position:4623376:-1
position: 4623376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4623484:-1
position: 4623484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4623075-4623296:-1:exon

position:4623296:-1
position: 4623296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC7A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cationic amino acid transporter 3
translation: MAPGRRVRQALGIFGEKLARRRPLEPGPGAETRFSRCLSGLDLVALGVGSTLGAGVYVLAGEVAKDKAGPSIVLCFLVAALSSVLAGLCYAEFGARVPRAGSAYLYSYVTVGELWAFTTGWNLILSYVIGTASVARAWSSAFDNLIGNRISATLQEAVPLGVPHVLAEYPDFFAFGLVLLLTGLLALGASESALVTKVFTGVNLLVLGFVIVSGFVKGDLRNWRLAADDYALDSPGPNDTYRLGPLGAGGFVPFGPDGILRGAATCFYAFVGFDCIATTGEEARDPQRTIPTGIVVSLLVCFVAYFGVSAALTLMMPYYLLRPESPLPEAFRHVGWAPARYVVAVGSLCALSTSLLGSMFPMPRVIFAMAEDGLLFRPLALVHARTRTPLVATVASGLVAAIMAFLFELSDLVDLMSIGTLLAYSLVAVCVLILRYQPDELMERKGEERVELRSAREEKTGRQEGGPGHPAPTLSRLLCHATAGPTPASGRLVYTCVSLLAVGLTALSLVLAQWAEELLAGSPVPVALFLLLLGLVAGVTGVVWRQPQSPTRLSFKVPVLPFLPVLSVFINVYLMMQLSAGTWARFGVWMALGFAIYFGYGIRHSVEGQRGDPLPTKTRSSDTSV
SIO_010081: SLC7A3
subclass of: SO_0000673
so part of: SLC7A3
location: complement(join(4623196..4623296,4623376..4623484,4625721..4625887,4625967..4626163,4634854..4634956,4637050..4637189,4637303..4637525,4637766..4637878,4639109..4639286,4639420..4639578,4642485..4642872))
location: region:4623196-4642872:-1
so has part: feature:4642485-4642872:-1:exon
so has part: feature:4639420-4639578:-1:exon
so has part: feature:4639109-4639286:-1:exon
so has part: feature:4637766-4637878:-1:exon
so has part: feature:4637303-4637525:-1:exon
so has part: feature:4637050-4637189:-1:exon
so has part: feature:4634854-4634956:-1:exon
so has part: feature:4625967-4626163:-1:exon
so has part: feature:4625721-4625887:-1:exon
so has part: feature:4623376-4623484:-1:exon
so has part: feature:4623196-4623296:-1:exon

XP_038604182.1
type: Protein
SIO_000068: ncbiprotein

position:4623196:-1
position: 4623196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4642485-4642872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4639420-4639578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4639109-4639286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4637766-4637878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4637303-4637525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4637050-4637189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4634854-4634956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4625967-4626163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4625721-4625887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4623376-4623484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4623196-4623296:-1:exon

SNX12
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SNX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4652913..4667895
location: region:4652913-4667895:1
so has part: feature:4652913-4667895:1:exon
subclass of: SO_0000010

119929945
type: Gene
SIO_000068: ncbigene

position:4652913:1
position: 4652913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4667895:1
position: 4667895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4652913-4667895:1:exon

SNX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SNX12
product: sorting nexin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748321.1
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(4652913..4653088,4660080..4660175,4662864..4662988,4667382..4667895)
location: region:4652913-4667895:1
so has part: feature:4652913-4653088:1:exon
so has part: feature:4660080-4660175:1:exon
so has part: feature:4662864-4662988:1:exon
so has part: feature:4667382-4667895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4652913-4653088:1:exon

position:4653088:1
position: 4653088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4660080-4660175:1:exon

position:4660080:1
position: 4660080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4660175:1
position: 4660175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4662864-4662988:1:exon

position:4662864:1
position: 4662864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4662988:1
position: 4662988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4667382-4667895:1:exon

position:4667382:1
position: 4667382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SNX12
product: sorting nexin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748322.1
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(4652913..4653076,4660080..4660175,4662864..4662988,4667382..4667895)
location: region:4652913-4667895:1
so has part: feature:4652913-4653076:1:exon
so has part: feature:4660080-4660175:1:exon
so has part: feature:4662864-4662988:1:exon
so has part: feature:4667382-4667895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4652913-4653076:1:exon

position:4653076:1
position: 4653076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4660080-4660175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4662864-4662988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4667382-4667895:1:exon

SNX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SNX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-12 isoform X1
translation: MSEASVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEEAFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEETIDRNYVPGKVRQ
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(4652924..4653088,4660080..4660175,4662864..4662988,4667382..4667484)
location: region:4652924-4667484:1
so has part: feature:4652924-4653088:1:exon
so has part: feature:4660080-4660175:1:exon
so has part: feature:4662864-4662988:1:exon
so has part: feature:4667382-4667484:1:exon

XP_038604249.1
type: Protein
SIO_000068: ncbiprotein

position:4652924:1
position: 4652924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4667484:1
position: 4667484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4652924-4653088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4660080-4660175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4662864-4662988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4667382-4667484:1:exon

SNX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SNX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-12 isoform X2
translation: MSEASVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYETNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEEAFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEETIDRNYVPGKVRQ
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(4652924..4653076,4660080..4660175,4662864..4662988,4667382..4667484)
location: region:4652924-4667484:1
so has part: feature:4652924-4653076:1:exon
so has part: feature:4660080-4660175:1:exon
so has part: feature:4662864-4662988:1:exon
so has part: feature:4667382-4667484:1:exon

XP_038604250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4652924-4653076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4660080-4660175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4662864-4662988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4667382-4667484:1:exon

FOXO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: FOXO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4676895..4691741
location: region:4676895-4691741:1
so has part: feature:4676895-4691741:1:exon
subclass of: SO_0000010

119930004
type: Gene
SIO_000068: ncbigene

position:4676895:1
position: 4676895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691741:1
position: 4691741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4676895-4691741:1:exon

FOXO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: FOXO4
product: forkhead box O4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748409.1
SIO_010081: FOXO4
subclass of: SO_0000673
so part of: FOXO4
location: join(4676895..4678298,4690500..4691274,4691470..4691614,4691726..4691741)
location: region:4676895-4691741:1
so has part: feature:4676895-4678298:1:exon
so has part: feature:4690500-4691274:1:exon
so has part: feature:4691470-4691614:1:exon
so has part: feature:4691726-4691741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4676895-4678298:1:exon

position:4678298:1
position: 4678298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4690500-4691274:1:exon

position:4690500:1
position: 4690500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691274:1
position: 4691274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4691470-4691614:1:exon

position:4691470:1
position: 4691470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691614:1
position: 4691614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4691726-4691741:1:exon

position:4691726:1
position: 4691726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: FOXO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O4
translation: MAAQAEGPGAPRGSRGDPDLEPLSRPRSCTWPLPRPEPPPGLPGPPPDRPGPPGPRKGGARRNAWGSQSYADLISQAIASSPDHRLTLAQIYDWMVRSVPYFKDKGDTNSSAGWKNSIRHNLSLHSKFVKVHNEATGKSSWWTLNPEAGKGGKAPRRRAASMDNSSRRARGKKKAAAAAAGGPDEADVWTVFRPRSGSNTSTASARPSPGAAEPDGADDEPPCAPVSEELELMDGLNLTSPAARDVLVGPADPVLPQTEPPPPPGSPPSGRRAGEPDAQARLPHDLDLDLELENLECDMDSIISDLLGGGEGLDFSFDPEAPRAPGRTPPRPPLGVQLAQGGPRGRGGGRRRTPGDPARFWGRGWDLFLFFGAGKHYSVPPPEGRAEETRPGSESRRGSLPAAPGLSLPPGRTSRGGGVESRGLPP
SIO_010081: FOXO4
subclass of: SO_0000673
so part of: FOXO4
location: join(4677954..4678298,4690500..4691274,4691470..4691614,4691726..4691741)
location: region:4677954-4691741:1
so has part: feature:4677954-4678298:1:exon
so has part: feature:4690500-4691274:1:exon
so has part: feature:4691470-4691614:1:exon
so has part: feature:4691726-4691741:1:exon

XP_038604337.1
type: Protein
SIO_000068: ncbiprotein

position:4677954:1
position: 4677954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4677954-4678298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690500-4691274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4691470-4691614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4691726-4691741:1:exon

C6HXorf65
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: C6HXorf65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4693115..4709747)
location: region:4693115-4709747:-1
so has part: feature:4693115-4709747:-1:exon
subclass of: SO_0000010

119929846
type: Gene
SIO_000068: ncbigene

position:4693115:-1
position: 4693115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709747:-1
position: 4709747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4693115-4709747:-1:exon

C6HXorf65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: C6HXorf65
product: chromosome 6 CXorf65 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038748174.1
SIO_010081: C6HXorf65
subclass of: SO_0000673
so part of: C6HXorf65
location: complement(join(4693115..4693254,4695625..4695728,4698999..4699067,4702413..4702547,4706795..4706881,4709682..4709747))
location: region:4693115-4709747:-1
so has part: feature:4709682-4709747:-1:exon
so has part: feature:4706795-4706881:-1:exon
so has part: feature:4702413-4702547:-1:exon
so has part: feature:4698999-4699067:-1:exon
so has part: feature:4695625-4695728:-1:exon
so has part: feature:4693115-4693254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4709682-4709747:-1:exon

position:4709682:-1
position: 4709682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4706795-4706881:-1:exon

position:4706795:-1
position: 4706795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4706881:-1
position: 4706881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4702413-4702547:-1:exon

position:4702413:-1
position: 4702413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4702547:-1
position: 4702547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4698999-4699067:-1:exon

position:4698999:-1
position: 4698999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4699067:-1
position: 4699067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4695625-4695728:-1:exon

position:4695625:-1
position: 4695625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695728:-1
position: 4695728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4693115-4693254:-1:exon

position:4693254:-1
position: 4693254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C6HXorf65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: C6HXorf65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CXorf65 homolog
translation: MFICVKHGDGQEFLANTNCSIPFLLQYARHKVGLPDSVPIDLCDQAGTLKLLFTAKLPGESAAKYFLPRGVYYVCRLERGAPGSRNENAYQAIIPILKEPDPGLLDALRAQCDYLEKSRLKLHRGQEKRIAAIDSASCLSTKTVGRGGQAEEEAAGRRGLLVAKAKSETSNKKEKHR
SIO_010081: C6HXorf65
subclass of: SO_0000673
so part of: C6HXorf65
location: complement(join(4693141..4693254,4695625..4695728,4698999..4699067,4702413..4702547,4706795..4706881,4709682..4709706))
location: region:4693141-4709706:-1
so has part: feature:4709682-4709706:-1:exon
so has part: feature:4706795-4706881:-1:exon
so has part: feature:4702413-4702547:-1:exon
so has part: feature:4698999-4699067:-1:exon
so has part: feature:4695625-4695728:-1:exon
so has part: feature:4693141-4693254:-1:exon

XP_038604102.1
type: Protein
SIO_000068: ncbiprotein

position:4693141:-1
position: 4693141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709706:-1
position: 4709706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4709682-4709706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4706795-4706881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4702413-4702547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4698999-4699067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4695625-4695728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4693141-4693254:-1:exon

IL2RG
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: IL2RG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4710462..4728078)
location: region:4710462-4728078:-1
so has part: feature:4710462-4728078:-1:exon
subclass of: SO_0000010

119929845
type: Gene
SIO_000068: ncbigene

position:4710462:-1
position: 4710462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4728078:-1
position: 4728078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4710462-4728078:-1:exon

IL2RG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: IL2RG
product: interleukin 2 receptor subunit gamma
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038748173.1
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: complement(join(4710462..4710560,4715423..4715504,4715588..4715699,4717569..4717732,4723694..4723833,4727046..4727224,4727485..4727620,4727841..4728078))
location: region:4710462-4728078:-1
so has part: feature:4727841-4728078:-1:exon
so has part: feature:4727485-4727620:-1:exon
so has part: feature:4727046-4727224:-1:exon
so has part: feature:4723694-4723833:-1:exon
so has part: feature:4717569-4717732:-1:exon
so has part: feature:4715588-4715699:-1:exon
so has part: feature:4715423-4715504:-1:exon
so has part: feature:4710462-4710560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4727841-4728078:-1:exon

position:4727841:-1
position: 4727841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4727485-4727620:-1:exon

position:4727485:-1
position: 4727485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4727620:-1
position: 4727620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4727046-4727224:-1:exon

position:4727046:-1
position: 4727046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4727224:-1
position: 4727224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4723694-4723833:-1:exon

position:4723694:-1
position: 4723694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4723833:-1
position: 4723833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4717569-4717732:-1:exon

position:4717569:-1
position: 4717569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4717732:-1
position: 4717732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4715588-4715699:-1:exon

position:4715588:-1
position: 4715588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715699:-1
position: 4715699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4715423-4715504:-1:exon

position:4715423:-1
position: 4715423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715504:-1
position: 4715504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4710462-4710560:-1:exon

position:4710560:-1
position: 4710560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL2RG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: IL2RG
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cytokine receptor common subunit gamma
translation: MASPSWASLLPLLLFLLGGRASSRPPAPAVVSGGLLAPRPLPVRCVVFNVEYMTCTWNGSDRSWPRAANLTLRYWCGKGENRSRECGRYLVTEGLRSGCWFNRTEICLYETFGVQLWTPFGALPKQEGMRLQDLVVPWPPWNLTLWNVSDSQLELSWTDRYSSQCLEHQVQYQTDQDAEWTVQWVSQQQRFSLASADGHKRYTFRVRSRFSPYCGSAQAWSSWSDPVHWGVNSSREAPPTGTGGLAGVGAVLIPLAFLTVLLVLVTALVRLERVWIILMPQIPNLKHLDELVSAHRGNFSDWSGVSKGLEESLQPDYSEHLCHISEPPPPDL
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: complement(join(4710462..4710560,4715423..4715504,4715588..4715699,4717569..4717732,4723694..4723833,4727046..4727224,4727485..4727620,4727841..4727928))
location: region:4710462-4727928:-1
so has part: feature:4727841-4727928:-1:exon
so has part: feature:4727485-4727620:-1:exon
so has part: feature:4727046-4727224:-1:exon
so has part: feature:4723694-4723833:-1:exon
so has part: feature:4717569-4717732:-1:exon
so has part: feature:4715588-4715699:-1:exon
so has part: feature:4715423-4715504:-1:exon
so has part: feature:4710462-4710560:-1:exon

XP_038604101.1
type: Protein
SIO_000068: ncbiprotein

position:4727928:-1
position: 4727928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4727841-4727928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4727485-4727620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4727046-4727224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4723694-4723833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4717569-4717732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4715588-4715699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4715423-4715504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4710462-4710560:-1:exon

MED12
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MED12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4740879..4839147
location: region:4740879-4839147:1
so has part: feature:4740879-4839147:1:exon
subclass of: SO_0000010

119930005
type: Gene
SIO_000068: ncbigene

position:4740879:1
position: 4740879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4839147:1
position: 4839147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740879-4839147:1:exon

MED12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MED12
product: mediator complex subunit 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748411.1
SIO_010081: MED12
subclass of: SO_0000673
so part of: MED12
location: join(4740879..4740988,4744312..4744416,4746959..4747150,4751459..4751618,4754854..4755020,4755099..4755209,4763060..4763318,4763421..4763567,4766916..4767015,4767250..4767386,4767500..4767631,4768810..4768936,4770962..4771188,4771280..4771360,4771457..4771627,4773455..4773599,4774314..4774432,4776208..4776351,4776444..4776607,4776705..4776836,4782556..4782783,4785544..4785688,4790467..4790587,4794881..4794982,4798483..4798596,4798706..4798875,4800654..4800833,4801001..4801072,4802621..4802742,4804497..4804658,4806066..4806177,4806273..4806362,4813255..4813364,4813463..4813598,4814808..4814969,4815062..4815460,4818680..4818830,4828025..4828260,4829993..4830073,4830163..4830404,4836948..4837196,4839111..4839147)
location: region:4740879-4839147:1
so has part: feature:4740879-4740988:1:exon
so has part: feature:4744312-4744416:1:exon
so has part: feature:4746959-4747150:1:exon
so has part: feature:4751459-4751618:1:exon
so has part: feature:4754854-4755020:1:exon
so has part: feature:4755099-4755209:1:exon
so has part: feature:4763060-4763318:1:exon
so has part: feature:4763421-4763567:1:exon
so has part: feature:4766916-4767015:1:exon
so has part: feature:4767250-4767386:1:exon
so has part: feature:4767500-4767631:1:exon
so has part: feature:4768810-4768936:1:exon
so has part: feature:4770962-4771188:1:exon
so has part: feature:4771280-4771360:1:exon
so has part: feature:4771457-4771627:1:exon
so has part: feature:4773455-4773599:1:exon
so has part: feature:4774314-4774432:1:exon
so has part: feature:4776208-4776351:1:exon
so has part: feature:4776444-4776607:1:exon
so has part: feature:4776705-4776836:1:exon
so has part: feature:4782556-4782783:1:exon
so has part: feature:4785544-4785688:1:exon
so has part: feature:4790467-4790587:1:exon
so has part: feature:4794881-4794982:1:exon
so has part: feature:4798483-4798596:1:exon
so has part: feature:4798706-4798875:1:exon
so has part: feature:4800654-4800833:1:exon
so has part: feature:4801001-4801072:1:exon
so has part: feature:4802621-4802742:1:exon
so has part: feature:4804497-4804658:1:exon
so has part: feature:4806066-4806177:1:exon
so has part: feature:4806273-4806362:1:exon
so has part: feature:4813255-4813364:1:exon
so has part: feature:4813463-4813598:1:exon
so has part: feature:4814808-4814969:1:exon
so has part: feature:4815062-4815460:1:exon
so has part: feature:4818680-4818830:1:exon
so has part: feature:4828025-4828260:1:exon
so has part: feature:4829993-4830073:1:exon
so has part: feature:4830163-4830404:1:exon
so has part: feature:4836948-4837196:1:exon
so has part: feature:4839111-4839147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4740879-4740988:1:exon

position:4740988:1
position: 4740988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4744312-4744416:1:exon

position:4744312:1
position: 4744312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4744416:1
position: 4744416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4746959-4747150:1:exon

position:4746959:1
position: 4746959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4747150:1
position: 4747150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4751459-4751618:1:exon

position:4751459:1
position: 4751459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751618:1
position: 4751618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4754854-4755020:1:exon

position:4754854:1
position: 4754854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4755020:1
position: 4755020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4755099-4755209:1:exon

position:4755099:1
position: 4755099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4755209:1
position: 4755209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4763060-4763318:1:exon

position:4763060:1
position: 4763060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4763318:1
position: 4763318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4763421-4763567:1:exon

position:4763421:1
position: 4763421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4763567:1
position: 4763567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4766916-4767015:1:exon

position:4766916:1
position: 4766916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767015:1
position: 4767015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4767250-4767386:1:exon

position:4767250:1
position: 4767250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767386:1
position: 4767386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4767500-4767631:1:exon

position:4767500:1
position: 4767500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767631:1
position: 4767631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4768810-4768936:1:exon

position:4768810:1
position: 4768810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4768936:1
position: 4768936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4770962-4771188:1:exon

position:4770962:1
position: 4770962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771188:1
position: 4771188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4771280-4771360:1:exon

position:4771280:1
position: 4771280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771360:1
position: 4771360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4771457-4771627:1:exon

position:4771457:1
position: 4771457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771627:1
position: 4771627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4773455-4773599:1:exon

position:4773455:1
position: 4773455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4773599:1
position: 4773599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4774314-4774432:1:exon

position:4774314:1
position: 4774314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4774432:1
position: 4774432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4776208-4776351:1:exon

position:4776208:1
position: 4776208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776351:1
position: 4776351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4776444-4776607:1:exon

position:4776444:1
position: 4776444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776607:1
position: 4776607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4776705-4776836:1:exon

position:4776705:1
position: 4776705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776836:1
position: 4776836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4782556-4782783:1:exon

position:4782556:1
position: 4782556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4782783:1
position: 4782783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4785544-4785688:1:exon

position:4785544:1
position: 4785544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4785688:1
position: 4785688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4790467-4790587:1:exon

position:4790467:1
position: 4790467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4790587:1
position: 4790587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4794881-4794982:1:exon

position:4794881:1
position: 4794881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4794982:1
position: 4794982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4798483-4798596:1:exon

position:4798483:1
position: 4798483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4798596:1
position: 4798596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4798706-4798875:1:exon

position:4798706:1
position: 4798706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4798875:1
position: 4798875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4800654-4800833:1:exon

position:4800654:1
position: 4800654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4800833:1
position: 4800833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4801001-4801072:1:exon

position:4801001:1
position: 4801001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4801072:1
position: 4801072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4802621-4802742:1:exon

position:4802621:1
position: 4802621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4802742:1
position: 4802742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4804497-4804658:1:exon

position:4804497:1
position: 4804497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4804658:1
position: 4804658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4806066-4806177:1:exon

position:4806066:1
position: 4806066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4806177:1
position: 4806177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4806273-4806362:1:exon

position:4806273:1
position: 4806273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4806362:1
position: 4806362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4813255-4813364:1:exon

position:4813255:1
position: 4813255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4813364:1
position: 4813364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4813463-4813598:1:exon

position:4813463:1
position: 4813463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4813598:1
position: 4813598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4814808-4814969:1:exon

position:4814808:1
position: 4814808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4814969:1
position: 4814969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:4815062-4815460:1:exon

position:4815062:1
position: 4815062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4815460:1
position: 4815460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:4818680-4818830:1:exon

position:4818680:1
position: 4818680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4818830:1
position: 4818830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:4828025-4828260:1:exon

position:4828025:1
position: 4828025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4828260:1
position: 4828260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:4829993-4830073:1:exon

position:4829993:1
position: 4829993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830073:1
position: 4830073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:4830163-4830404:1:exon

position:4830163:1
position: 4830163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830404:1
position: 4830404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:4836948-4837196:1:exon

position:4836948:1
position: 4836948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4837196:1
position: 4837196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:4839111-4839147:1:exon

position:4839111:1
position: 4839111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MED12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MED12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12
translation: MAAFGVLSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAKNVNFNPAKISSNFSSIIAEKLRCSTLPDTGRRKPQVNQKDNFWLVTARSQNAINAWFTDLAGTKPLLHLAKKVPIFSKKEEVLGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHVIDPFIEWTQIITKYLWEQVQKMADFYRPGGCGSAPGPPPHDVEAALRQWEYNEKLAMFMFQDGMLDRHEFLTWVLECFEKIRPAEDELLRLLLPLLLRYSGEFVQSAYLSRRLAYFCTRRLALQLDGAGGHPPHGPAGPPPAALPAPAPAPPPQPANAPPPPFSDLLLCPQHRPLVFGLSCLLQSILLCCPSALVWHYSLTDNRIKTGSPLDHLPIAPSNLPMPGGNSTFTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFNNSLDSLCNRIFGLGPGKDGHEVSPDDDAVVALLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAERCGESEAADEKGSVSSGSLSAPSAPIFQDVLLQFLDTQAPVLTDPRSESERVEFFNLVLLFCELIRHDVFSHNMYTCTLISRGDLALGAPGPRPPSPAPDDDDPDRKDGEPPGAAKLEDAGLSEPMDVDPGSGAAFEELEKPDFSMFSPTMHCEGKGSPSPEKPDADREAKAPTKEKAEGSLGALYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDEARHAIKKITKDILKVLNRKGTAETGGEDGQKRRRSRPEAFPTAEDIFSKFQHLSHFDQHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQLIFDLMEYSLSISGLIDFAIQLLNELSVVEAELLLKSSDLVGSYTTGLCLCIVAVLRHYHACLILNQDQMAQVFEGLCGVVKHGMNRSDSSSAERCILAYLYDLYTSCSHLRSKFGELFSDFCSKVKNTIYCNVEPSESNMRWAPEFMIDTLENPAAHTFTYTGLGKSLTDNPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQPDCNKPAVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGASFTVAGGPDELPEEDGAGGGRRPGGRSVSVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQRLMQLICYPHRLLDHEHGDNPQRQRIKRILQNLDQWTMRQSSLELQLMIKQTASNEMNSLLENIAKATIEVFQQSAETGAATGPSPPSSKAKPVLSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVHQIVNNWRDDQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLEVIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGIMEENKRAYMNLVKKLRKELGERQSDSLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFEGLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYFLEPLPLPPEDEEPPPPPAPMEPEKKPPEPPKPDKAAQAQPPAATAAVAAEERKKKPSKSKKRSQAAGKAEDFGLGPGRGGPYPVAVPTDVMHHQAGTPGARINYGQSPAGLYPQNQPLPAGGPRLDTTYRPMRVPVGKLPSRPAYPGVLPSPIPGVLGLDAAYKSPAYRQQAQPQQPAPPPPPPVPQGQFLRQQLQAKLSQGILGQPAAVRQIPPGSSYGALQASQGYTPYGSHLGLQQAAAAAAAGPAHPAGLVPPTYPGQPYPGPHAATANATLVEATRHLQQRSSG…
SIO_010081: MED12
subclass of: SO_0000673
so part of: MED12
location: join(4740890..4740988,4744312..4744416,4746959..4747150,4751459..4751618,4754854..4755020,4755099..4755209,4763060..4763318,4763421..4763567,4766916..4767015,4767250..4767386,4767500..4767631,4768810..4768936,4770962..4771188,4771280..4771360,4771457..4771627,4773455..4773599,4774314..4774432,4776208..4776351,4776444..4776607,4776705..4776836,4782556..4782783,4785544..4785688,4790467..4790587,4794881..4794982,4798483..4798596,4798706..4798875,4800654..4800833,4801001..4801072,4802621..4802742,4804497..4804658,4806066..4806177,4806273..4806362,4813255..4813364,4813463..4813598,4814808..4814969,4815062..4815460,4818680..4818830,4828025..4828260,4829993..4830073,4830163..4830404,4836948..4837196,4839111..4839147)
location: region:4740890-4839147:1
so has part: feature:4740890-4740988:1:exon
so has part: feature:4744312-4744416:1:exon
so has part: feature:4746959-4747150:1:exon
so has part: feature:4751459-4751618:1:exon
so has part: feature:4754854-4755020:1:exon
so has part: feature:4755099-4755209:1:exon
so has part: feature:4763060-4763318:1:exon
so has part: feature:4763421-4763567:1:exon
so has part: feature:4766916-4767015:1:exon
so has part: feature:4767250-4767386:1:exon
so has part: feature:4767500-4767631:1:exon
so has part: feature:4768810-4768936:1:exon
so has part: feature:4770962-4771188:1:exon
so has part: feature:4771280-4771360:1:exon
so has part: feature:4771457-4771627:1:exon
so has part: feature:4773455-4773599:1:exon
so has part: feature:4774314-4774432:1:exon
so has part: feature:4776208-4776351:1:exon
so has part: feature:4776444-4776607:1:exon
so has part: feature:4776705-4776836:1:exon
so has part: feature:4782556-4782783:1:exon
so has part: feature:4785544-4785688:1:exon
so has part: feature:4790467-4790587:1:exon
so has part: feature:4794881-4794982:1:exon
so has part: feature:4798483-4798596:1:exon
so has part: feature:4798706-4798875:1:exon
so has part: feature:4800654-4800833:1:exon
so has part: feature:4801001-4801072:1:exon
so has part: feature:4802621-4802742:1:exon
so has part: feature:4804497-4804658:1:exon
so has part: feature:4806066-4806177:1:exon
so has part: feature:4806273-4806362:1:exon
so has part: feature:4813255-4813364:1:exon
so has part: feature:4813463-4813598:1:exon
so has part: feature:4814808-4814969:1:exon
so has part: feature:4815062-4815460:1:exon
so has part: feature:4818680-4818830:1:exon
so has part: feature:4828025-4828260:1:exon
so has part: feature:4829993-4830073:1:exon
so has part: feature:4830163-4830404:1:exon
so has part: feature:4836948-4837196:1:exon
so has part: feature:4839111-4839147:1:exon

XP_038604339.1
type: Protein
SIO_000068: ncbiprotein

position:4740890:1
position: 4740890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740890-4740988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4744312-4744416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4746959-4747150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4751459-4751618:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4754854-4755020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4755099-4755209:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4763060-4763318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4763421-4763567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4766916-4767015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4767250-4767386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4767500-4767631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4768810-4768936:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4770962-4771188:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4771280-4771360:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4771457-4771627:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4773455-4773599:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4774314-4774432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4776208-4776351:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4776444-4776607:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4776705-4776836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4782556-4782783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4785544-4785688:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4790467-4790587:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4794881-4794982:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4798483-4798596:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4798706-4798875:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4800654-4800833:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4801001-4801072:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4802621-4802742:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4804497-4804658:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4806066-4806177:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4806273-4806362:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4813255-4813364:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4813463-4813598:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4814808-4814969:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4815062-4815460:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4818680-4818830:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4828025-4828260:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4829993-4830073:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4830163-4830404:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4836948-4837196:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4839111-4839147:1:exon

LOC119930132
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4839313..4851160
location: region:4839313-4851160:1
so has part: feature:4839313-4851160:1:exon
subclass of: SO_0000011

119930132
type: Gene
SIO_000068: ncbigene

position:4839313:1
position: 4839313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851160:1
position: 4851160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4839313-4851160:1:exon

LOC119930132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9261
nc RNA class: lncRNA
gene: LOC119930132
product: uncharacterized LOC119930132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005451629.1
SIO_010081: LOC119930132
subclass of: SO_0000673
so part of: LOC119930132
location: join(4839313..4839397,4850738..4850819,4850920..4851160)
location: region:4839313-4851160:1
so has part: feature:4839313-4839397:1:exon
so has part: feature:4850738-4850819:1:exon
so has part: feature:4850920-4851160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4839313-4839397:1:exon

position:4839397:1
position: 4839397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4850738-4850819:1:exon

position:4850738:1
position: 4850738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4850819:1
position: 4850819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4850920-4851160:1:exon

position:4850920:1
position: 4850920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NLGN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4864334..4905651
location: region:4864334-4905651:1
so has part: feature:4864334-4905651:1:exon
subclass of: SO_0000010

119929947
type: Gene
SIO_000068: ncbigene

position:4864334:1
position: 4864334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4905651:1
position: 4905651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4864334-4905651:1:exon

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NLGN3
product: neuroligin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748326.1
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4864334..4864397,4866647..4867200,4867521..4867580,4886916..4886975,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905651)
location: region:4864334-4905651:1
so has part: feature:4864334-4864397:1:exon
so has part: feature:4866647-4867200:1:exon
so has part: feature:4867521-4867580:1:exon
so has part: feature:4886916-4886975:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4864334-4864397:1:exon

position:4864397:1
position: 4864397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4866647-4867200:1:exon

position:4866647:1
position: 4866647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4867200:1
position: 4867200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4867521-4867580:1:exon

position:4867521:1
position: 4867521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4867580:1
position: 4867580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4886916-4886975:1:exon

position:4886916:1
position: 4886916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4886975:1
position: 4886975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4887424-4887573:1:exon

position:4887424:1
position: 4887424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4887573:1
position: 4887573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4889123-4889308:1:exon

position:4889123:1
position: 4889123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4889308:1
position: 4889308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4900702-4901491:1:exon

position:4900702:1
position: 4900702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4901491:1
position: 4901491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4904724-4905651:1:exon

position:4904724:1
position: 4904724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NLGN3
product: neuroligin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748327.1
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4864334..4864397,4866647..4867200,4886916..4886975,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905651)
location: region:4864334-4905651:1
so has part: feature:4864334-4864397:1:exon
so has part: feature:4866647-4867200:1:exon
so has part: feature:4886916-4886975:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4864334-4864397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4866647-4867200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4886916-4886975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4887424-4887573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4889123-4889308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4900702-4901491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4904724-4905651:1:exon

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NLGN3
product: neuroligin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748328.1
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4864334..4864397,4866647..4867200,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905651)
location: region:4864334-4905651:1
so has part: feature:4864334-4864397:1:exon
so has part: feature:4866647-4867200:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4864334-4864397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4866647-4867200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4887424-4887573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4889123-4889308:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4900702-4901491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4904724-4905651:1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X1
translation: MLPVWFTANLDVVATYIQDPSEDCLYLNVYVPTEDVKRISKECARKPNKKICRKGGSGSKKQGQDLADNDGDEDEDIRDGGSKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVVTLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSQNIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPAKYTSLLADKVGCNVLDTADLVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGINQGEGLKFVEGAVDPEDGVSGAAFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPAVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGMPMLGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWAKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTTKVPGPDATRRPGPAARPTQRPAGGAPAYSHEGARDGGPRHAAGPPPGGDPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRRDPPRPPSPRRGPEEEMAALRLGPGTPEGEAAGADAAPRDALRLAALPDYALTLCRSPDDPPLVTPNTITMIPNSLVGLQTLHPYTFAAGFAGTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4867095..4867200,4867521..4867580,4886916..4886975,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905534)
location: region:4867095-4905534:1
so has part: feature:4867095-4867200:1:exon
so has part: feature:4867521-4867580:1:exon
so has part: feature:4886916-4886975:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905534:1:exon

XP_038604254.1
type: Protein
SIO_000068: ncbiprotein

position:4867095:1
position: 4867095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4905534:1
position: 4905534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4867095-4867200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4867521-4867580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4886916-4886975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4887424-4887573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4889123-4889308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4900702-4901491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4904724-4905534:1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X2
translation: MLPVWFTANLDVVATYIQDPSEDCLYLNVYVPTEDGSGSKKQGQDLADNDGDEDEDIRDGGSKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVVTLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSQNIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPAKYTSLLADKVGCNVLDTADLVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGINQGEGLKFVEGAVDPEDGVSGAAFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPAVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGMPMLGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWAKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTTKVPGPDATRRPGPAARPTQRPAGGAPAYSHEGARDGGPRHAAGPPPGGDPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRRDPPRPPSPRRGPEEEMAALRLGPGTPEGEAAGADAAPRDALRLAALPDYALTLCRSPDDPPLVTPNTITMIPNSLVGLQTLHPYTFAAGFAGTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4867095..4867200,4886916..4886975,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905534)
location: region:4867095-4905534:1
so has part: feature:4867095-4867200:1:exon
so has part: feature:4886916-4886975:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905534:1:exon

XP_038604255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4867095-4867200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4886916-4886975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4887424-4887573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4889123-4889308:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4900702-4901491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4904724-4905534:1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X3
translation: MLPVWFTANLDVVATYIQDPSEDCLYLNVYVPTEDDIRDGGSKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVVTLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSQNIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPAKYTSLLADKVGCNVLDTADLVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGINQGEGLKFVEGAVDPEDGVSGAAFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPAVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGMPMLGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWAKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTTKVPGPDATRRPGPAARPTQRPAGGAPAYSHEGARDGGPRHAAGPPPGGDPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRRDPPRPPSPRRGPEEEMAALRLGPGTPEGEAAGADAAPRDALRLAALPDYALTLCRSPDDPPLVTPNTITMIPNSLVGLQTLHPYTFAAGFAGTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: join(4867095..4867200,4887424..4887573,4889123..4889308,4900702..4901491,4904724..4905534)
location: region:4867095-4905534:1
so has part: feature:4867095-4867200:1:exon
so has part: feature:4887424-4887573:1:exon
so has part: feature:4889123-4889308:1:exon
so has part: feature:4900702-4901491:1:exon
so has part: feature:4904724-4905534:1:exon

XP_038604256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4867095-4867200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4887424-4887573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4889123-4889308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4900702-4901491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4904724-4905534:1:exon

GJB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GJB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4915892..4932281
location: region:4915892-4932281:1
so has part: feature:4915892-4932281:1:exon
subclass of: SO_0000010

119929802
type: Gene
SIO_000068: ncbigene

position:4915892:1
position: 4915892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4932281:1
position: 4932281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4915892-4932281:1:exon

GJB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GJB1
product: gap junction protein beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038748091.1
SIO_010081: GJB1
subclass of: SO_0000673
so part of: GJB1
location: join(4915892..4916049,4931355..4932281)
location: region:4915892-4932281:1
so has part: feature:4915892-4916049:1:exon
so has part: feature:4931355-4932281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4915892-4916049:1:exon

position:4916049:1
position: 4916049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4931355-4932281:1:exon

position:4931355:1
position: 4931355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GJB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GJB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-1 protein
translation: MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSAFTCNTQQPGCNSVCYDHFFPVSHVRLWSLQLILVSTPALLVAMHVAHQQHAEKKLLRLEGRGDPLLLEEVKRHKVRISGTLWWTYVVSVAFRLLFEAVFMYVFYLLYPGYAMVRLVKCEAFPCPNTVDCFVSRPTEKTVFTVFMLAASGLCVALNVAELVYLVVRACARRARRRRGHRARGGSGGFGHRLSPESKQNEINKLLGEQDGSLKDLLRRGPGSAQAEKGDRCSAC
SIO_010081: GJB1
subclass of: SO_0000673
so part of: GJB1
location: 4931369..4932217
location: region:4931369-4932217:1
so has part: feature:4931369-4932217:1:exon

XP_038604019.1
type: Protein
SIO_000068: ncbiprotein

position:4931369:1
position: 4931369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4932217:1
position: 4932217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4931369-4932217:1:exon

ZMYM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4933128..4947019)
location: region:4933128-4947019:-1
so has part: feature:4933128-4947019:-1:exon
subclass of: SO_0000010

119929479
type: Gene
SIO_000068: ncbigene

position:4933128:-1
position: 4933128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4947019:-1
position: 4947019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4933128-4947019:-1:exon

ZMYM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZMYM3
product: zinc finger MYM-type containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038747618.1
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: complement(join(4933128..4933489,4933570..4933690,4934017..4934280,4934462..4934576,4939660..4939811,4939892..4940087,4940168..4940274,4940354..4940500,4940586..4940760,4940926..4941044,4941125..4941284,4941369..4941442,4941539..4941704,4941790..4941962,4944034..4944184,4944287..4944373,4944494..4944609,4944703..4944853,4945550..4945768,4945858..4946041,4946130..4946436,4946554..4946626,4946714..4946757,4946883..4947019))
location: region:4933128-4947019:-1
so has part: feature:4946883-4947019:-1:exon
so has part: feature:4946714-4946757:-1:exon
so has part: feature:4946554-4946626:-1:exon
so has part: feature:4946130-4946436:-1:exon
so has part: feature:4945858-4946041:-1:exon
so has part: feature:4945550-4945768:-1:exon
so has part: feature:4944703-4944853:-1:exon
so has part: feature:4944494-4944609:-1:exon
so has part: feature:4944287-4944373:-1:exon
so has part: feature:4944034-4944184:-1:exon
so has part: feature:4941790-4941962:-1:exon
so has part: feature:4941539-4941704:-1:exon
so has part: feature:4941369-4941442:-1:exon
so has part: feature:4941125-4941284:-1:exon
so has part: feature:4940926-4941044:-1:exon
so has part: feature:4940586-4940760:-1:exon
so has part: feature:4940354-4940500:-1:exon
so has part: feature:4940168-4940274:-1:exon
so has part: feature:4939892-4940087:-1:exon
so has part: feature:4939660-4939811:-1:exon
so has part: feature:4934462-4934576:-1:exon
so has part: feature:4934017-4934280:-1:exon
so has part: feature:4933570-4933690:-1:exon
so has part: feature:4933128-4933489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4946883-4947019:-1:exon

position:4946883:-1
position: 4946883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4946714-4946757:-1:exon

position:4946714:-1
position: 4946714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946757:-1
position: 4946757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4946554-4946626:-1:exon

position:4946554:-1
position: 4946554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946626:-1
position: 4946626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4946130-4946436:-1:exon

position:4946130:-1
position: 4946130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946436:-1
position: 4946436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4945858-4946041:-1:exon

position:4945858:-1
position: 4945858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4946041:-1
position: 4946041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4945550-4945768:-1:exon

position:4945550:-1
position: 4945550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4945768:-1
position: 4945768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4944703-4944853:-1:exon

position:4944703:-1
position: 4944703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944853:-1
position: 4944853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4944494-4944609:-1:exon

position:4944494:-1
position: 4944494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944609:-1
position: 4944609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4944287-4944373:-1:exon

position:4944287:-1
position: 4944287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944373:-1
position: 4944373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4944034-4944184:-1:exon

position:4944034:-1
position: 4944034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944184:-1
position: 4944184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4941790-4941962:-1:exon

position:4941790:-1
position: 4941790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941962:-1
position: 4941962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4941539-4941704:-1:exon

position:4941539:-1
position: 4941539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941704:-1
position: 4941704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4941369-4941442:-1:exon

position:4941369:-1
position: 4941369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941442:-1
position: 4941442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4941125-4941284:-1:exon

position:4941125:-1
position: 4941125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941284:-1
position: 4941284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4940926-4941044:-1:exon

position:4940926:-1
position: 4940926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941044:-1
position: 4941044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4940586-4940760:-1:exon

position:4940586:-1
position: 4940586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4940760:-1
position: 4940760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4940354-4940500:-1:exon

position:4940354:-1
position: 4940354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4940500:-1
position: 4940500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4940168-4940274:-1:exon

position:4940168:-1
position: 4940168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4940274:-1
position: 4940274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4939892-4940087:-1:exon

position:4939892:-1
position: 4939892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4940087:-1
position: 4940087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4939660-4939811:-1:exon

position:4939660:-1
position: 4939660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4939811:-1
position: 4939811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4934462-4934576:-1:exon

position:4934462:-1
position: 4934462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4934576:-1
position: 4934576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4934017-4934280:-1:exon

position:4934017:-1
position: 4934017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4934280:-1
position: 4934280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4933570-4933690:-1:exon

position:4933570:-1
position: 4933570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4933690:-1
position: 4933690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4933128-4933489:-1:exon

position:4933489:-1
position: 4933489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMYM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: ZMYM3
product: zinc finger MYM-type containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038747617.1
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: complement(join(4933128..4933489,4933570..4933690,4934017..4934280,4934462..4934576,4939660..4939811,4939892..4940087,4940168..4940274,4940354..4940500,4940586..4940760,4940926..4941044,4941125..4941442,4941539..4941704,4941790..4941962,4944034..4944184,4944287..4944373,4944494..4944609,4944703..4944853,4945550..4945768,4945858..4946041,4946130..4946436,4946554..4946626,4946714..4946757,4946883..4947019))
location: region:4933128-4947019:-1
so has part: feature:4946883-4947019:-1:exon
so has part: feature:4946714-4946757:-1:exon
so has part: feature:4946554-4946626:-1:exon
so has part: feature:4946130-4946436:-1:exon
so has part: feature:4945858-4946041:-1:exon
so has part: feature:4945550-4945768:-1:exon
so has part: feature:4944703-4944853:-1:exon
so has part: feature:4944494-4944609:-1:exon
so has part: feature:4944287-4944373:-1:exon
so has part: feature:4944034-4944184:-1:exon
so has part: feature:4941790-4941962:-1:exon
so has part: feature:4941539-4941704:-1:exon
so has part: feature:4941125-4941442:-1:exon
so has part: feature:4940926-4941044:-1:exon
so has part: feature:4940586-4940760:-1:exon
so has part: feature:4940354-4940500:-1:exon
so has part: feature:4940168-4940274:-1:exon
so has part: feature:4939892-4940087:-1:exon
so has part: feature:4939660-4939811:-1:exon
so has part: feature:4934462-4934576:-1:exon
so has part: feature:4934017-4934280:-1:exon
so has part: feature:4933570-4933690:-1:exon
so has part: feature:4933128-4933489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4946883-4947019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4946714-4946757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4946554-4946626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4946130-4946436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4945858-4946041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4945550-4945768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4944703-4944853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4944494-4944609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4944287-4944373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4944034-4944184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941790-4941962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4941539-4941704:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4941125-4941442:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4940926-4941044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4940586-4940760:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4940354-4940500:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4940168-4940274:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4939892-4940087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4939660-4939811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4934462-4934576:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4934017-4934280:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4933570-4933690:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4933128-4933489:-1:exon

ZMYM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 3 isoform X2
translation: MAGGSPEREPPEPPSPPAGDPREGGGGGSQTDPGGPGSPAPSGLAGAVQPERGSEPPLEKGHKRSERARRSEATKAETVDSAESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRVSLRAHAASRAAAAAAARSAGAKMTCAHCRTPLQKGQTAYQRKGLPQLFCSASCLTSFSKKPAGRKACTFCKKEIWNAKDSIMAQTGTGSSFHEFCTSVCLSLYEAQQQRPDPQPGEAPAETTARCSVCHRAGEVLHEVSNGSVVHQLCSDSCFSKFRATKGLKTNCCDQCGAYIYGKGGGPPAQQLFHEGQQKRFCSAACLGGYKKKNTRVYPCVWCKTLSKNFEMLPHVDRNGKTGLFCSLCCTTSHKVKQAGLVGPPRPCSFCRRSLPDPCYYNKADRTVYQFCSPSCWSKFQRSSPEGGPHLTCHYCHSLFSTKPEVLEWQDQAFQFCCRDCCEDFKRLRGVVSQCSHCRQEKLLHDKLRFSGVEKSFCSQGCVLLYKQDFTKKLGLCCVTCTYCSQTCQRGVSEQLDGSTWDFCSEACKDKYLLWYCKAARCHACKRQGKLLETIHWRGQVRHLCNEQCLLRFYSHQNQPNLDTQSGPESLLNHQSPPEPRPSTPAAPAQAGADHGPPLSGRTRSATQPPPPPPPPPPSTPRKNKAAMCKPLMQNRGVTCHVETSSKGCQTEEEQKPPQVIVLPIPVPVFVPVPMHLYCQKVPVPFSMPVPVPVPLFLPTTLENTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSTEGLLEDCDLFGPARDDVLAMAVKMANVLDGPGQDLEADFPKNPLDINPSVDFLFDCGLVGPDEVSAAEQDLPRAIRKGQKRLVLSESCSRDSLSSQPSCTPGLNYSYGVNAWKAWVQGKYAGGGGGGGGGEAGGKAEELRFGPKPMRIKEDILACTAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLENGRMVNIFTDLYYLTFIQELNKSLSSWQPSLLHNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFANVVRQARKGGGARGGGAPKGASIRYYAPPVRQRKGRDGGAGKRKREEEQLPVLEQRENRLNPLRCPVKFYEFYLSKCPETLRGRSDVFYLQPERSCLAESPLWYSVIPMDRGMLESMLNRILAVRDIYDDPPRPGEDQLD
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: complement(join(4933297..4933489,4933570..4933690,4934017..4934280,4934462..4934576,4939660..4939811,4939892..4940087,4940168..4940274,4940354..4940500,4940586..4940760,4940926..4941044,4941125..4941284,4941369..4941442,4941539..4941704,4941790..4941962,4944034..4944184,4944287..4944373,4944494..4944609,4944703..4944853,4945550..4945768,4945858..4946041,4946130..4946436,4946554..4946626,4946714..4946757,4946883..4947018))
location: region:4933297-4947018:-1
so has part: feature:4946883-4947018:-1:exon
so has part: feature:4946714-4946757:-1:exon
so has part: feature:4946554-4946626:-1:exon
so has part: feature:4946130-4946436:-1:exon
so has part: feature:4945858-4946041:-1:exon
so has part: feature:4945550-4945768:-1:exon
so has part: feature:4944703-4944853:-1:exon
so has part: feature:4944494-4944609:-1:exon
so has part: feature:4944287-4944373:-1:exon
so has part: feature:4944034-4944184:-1:exon
so has part: feature:4941790-4941962:-1:exon
so has part: feature:4941539-4941704:-1:exon
so has part: feature:4941369-4941442:-1:exon
so has part: feature:4941125-4941284:-1:exon
so has part: feature:4940926-4941044:-1:exon
so has part: feature:4940586-4940760:-1:exon
so has part: feature:4940354-4940500:-1:exon
so has part: feature:4940168-4940274:-1:exon
so has part: feature:4939892-4940087:-1:exon
so has part: feature:4939660-4939811:-1:exon
so has part: feature:4934462-4934576:-1:exon
so has part: feature:4934017-4934280:-1:exon
so has part: feature:4933570-4933690:-1:exon
so has part: feature:4933297-4933489:-1:exon

XP_038603546.1
type: Protein
SIO_000068: ncbiprotein

position:4933297:-1
position: 4933297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4947018:-1
position: 4947018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4946883-4947018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4946714-4946757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4946554-4946626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4946130-4946436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4945858-4946041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4945550-4945768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4944703-4944853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4944494-4944609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4944287-4944373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4944034-4944184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941790-4941962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4941539-4941704:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4941369-4941442:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4941125-4941284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4940926-4941044:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4940586-4940760:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4940354-4940500:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4940168-4940274:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4939892-4940087:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4939660-4939811:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4934462-4934576:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4934017-4934280:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4933570-4933690:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4933297-4933489:-1:exon

ZMYM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 3 isoform X1
translation: MAGGSPEREPPEPPSPPAGDPREGGGGGSQTDPGGPGSPAPSGLAGAVQPERGSEPPLEKGHKRSERARRSEATKAETVDSAESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRVSLRAHAASRAAAAAAARSAGAKMTCAHCRTPLQKGQTAYQRKGLPQLFCSASCLTSFSKKPAGRKACTFCKKEIWNAKDSIMAQTGTGSSFHEFCTSVCLSLYEAQQQRPDPQPGEAPAETTARCSVCHRAGEVLHEVSNGSVVHQLCSDSCFSKFRATKGLKTNCCDQCGAYIYGKGGGPPAQQLFHEGQQKRFCSAACLGGYKKKNTRVYPCVWCKTLSKNFEMLPHVDRNGKTGLFCSLCCTTSHKVKQAGLVGPPRPCSFCRRSLPDPCYYNKADRTVYQFCSPSCWSKFQRSSPEGGPHLTCHYCHSLFSTKPEVLEWQDQAFQFCCRDCCEDFKRLRGVVSQCSHCRQEKLLHDKLRFSGVEKSFCSQGCVLLYKQDFTKKLGLCCVTCTYCSQTCQRGVSEQLDGSTWDFCSEACKDKYLLWYCKAARCHACKRQGKLLETIHWRGQVRHLCNEQCLLRFYSHQNQPNLDTQSGPESLLNHQSPPEPRPSTPAAPAQAGADHGPPVRGGSGGDGVPHPGRGRPPTCDSPGRAQLSGRTRSATQPPPPPPPPPPSTPRKNKAAMCKPLMQNRGVTCHVETSSKGCQTEEEQKPPQVIVLPIPVPVFVPVPMHLYCQKVPVPFSMPVPVPVPLFLPTTLENTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSTEGLLEDCDLFGPARDDVLAMAVKMANVLDGPGQDLEADFPKNPLDINPSVDFLFDCGLVGPDEVSAAEQDLPRAIRKGQKRLVLSESCSRDSLSSQPSCTPGLNYSYGVNAWKAWVQGKYAGGGGGGGGGEAGGKAEELRFGPKPMRIKEDILACTAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLENGRMVNIFTDLYYLTFIQELNKSLSSWQPSLLHNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFANVVRQARKGGGARGGGAPKGASIRYYAPPVRQRKGRDGGAGKRKREEEQLPVLEQRENRLNPLRCPVKFYEFYLSKCPETLRGRSDVFYLQPERSCLAESPLWYSVIPMDRGMLESMLNRILAVRDIYDDPPRPGEDQLD
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: complement(join(4933297..4933489,4933570..4933690,4934017..4934280,4934462..4934576,4939660..4939811,4939892..4940087,4940168..4940274,4940354..4940500,4940586..4940760,4940926..4941044,4941125..4941442,4941539..4941704,4941790..4941962,4944034..4944184,4944287..4944373,4944494..4944609,4944703..4944853,4945550..4945768,4945858..4946041,4946130..4946436,4946554..4946626,4946714..4946757,4946883..4947018))
location: region:4933297-4947018:-1
so has part: feature:4946883-4947018:-1:exon
so has part: feature:4946714-4946757:-1:exon
so has part: feature:4946554-4946626:-1:exon
so has part: feature:4946130-4946436:-1:exon
so has part: feature:4945858-4946041:-1:exon
so has part: feature:4945550-4945768:-1:exon
so has part: feature:4944703-4944853:-1:exon
so has part: feature:4944494-4944609:-1:exon
so has part: feature:4944287-4944373:-1:exon
so has part: feature:4944034-4944184:-1:exon
so has part: feature:4941790-4941962:-1:exon
so has part: feature:4941539-4941704:-1:exon
so has part: feature:4941125-4941442:-1:exon
so has part: feature:4940926-4941044:-1:exon
so has part: feature:4940586-4940760:-1:exon
so has part: feature:4940354-4940500:-1:exon
so has part: feature:4940168-4940274:-1:exon
so has part: feature:4939892-4940087:-1:exon
so has part: feature:4939660-4939811:-1:exon
so has part: feature:4934462-4934576:-1:exon
so has part: feature:4934017-4934280:-1:exon
so has part: feature:4933570-4933690:-1:exon
so has part: feature:4933297-4933489:-1:exon

XP_038603545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4946883-4947018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4946714-4946757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4946554-4946626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4946130-4946436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4945858-4946041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4945550-4945768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4944703-4944853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4944494-4944609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4944287-4944373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4944034-4944184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941790-4941962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4941539-4941704:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4941125-4941442:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4940926-4941044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4940586-4940760:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4940354-4940500:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4940168-4940274:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4939892-4940087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4939660-4939811:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4934462-4934576:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4934017-4934280:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4933570-4933690:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4933297-4933489:-1:exon

LOC119930006
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119930006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<4947034..4950456)
location: region:4947034-4950456:-1
so has part: feature:4947034-4950456:-1:exon
subclass of: SO_0000010

119930006
type: Gene
SIO_000068: ncbigene

position:4947034:-1
position: 4947034
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4950456:-1
position: 4950456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947034-4950456:-1:exon

LOC119930006
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119930006
product: zinc finger MYM-type protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748412.1
SIO_010081: LOC119930006
subclass of: SO_0000673
so part of: LOC119930006
location: complement(join(<4947034..4947040,4947083..4947541,4950367..4950456))
location: region:4947034-4950456:-1
so has part: feature:4950367-4950456:-1:exon
so has part: feature:4947083-4947541:-1:exon
so has part: feature:4947034-4947040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4950367-4950456:-1:exon

position:4950367:-1
position: 4950367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4947083-4947541:-1:exon

position:4947083:-1
position: 4947083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4947541:-1
position: 4947541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4947034-4947040:-1:exon

position:4947040:-1
position: 4947040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119930006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119930006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 3-like
translation: MDPGDFPDPFDPLTLPEKPLAGDLPEDMEFGEDLLGSQTAPPGGWMAPVAPGVGGLGLLDAPPRGGLDKGPSLLDGATELLELGALLYKEPSPPAGERGSGEALGWEVGDRAGKASPLPLPRGSPEALILPPSHHLEEEEEEEVVEEAA
SIO_010081: LOC119930006
subclass of: SO_0000673
so part of: LOC119930006
location: complement(join(<4947034..4947040,4947083..4947522))
location: region:4947034-4947522:-1
so has part: feature:4947083-4947522:-1:exon
so has part: feature:4947034-4947040:-1:exon

XP_038604340.1
type: Protein
SIO_000068: ncbiprotein

position:4947522:-1
position: 4947522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947083-4947522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4947034-4947040:-1:exon

NONO
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4957060..4997799
location: region:4957060-4997799:1
so has part: feature:4957060-4997799:1:exon
subclass of: SO_0000010

119929480
type: Gene
SIO_000068: ncbigene

position:4957060:1
position: 4957060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4997799:1
position: 4997799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957060-4997799:1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038747621.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4957060..4957137,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997799)
location: region:4957060-4997799:1
so has part: feature:4957060-4957137:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4957060-4957137:1:exon

position:4957137:1
position: 4957137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

position:4975015:1
position: 4975015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975129:1
position: 4975129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

position:4980474:1
position: 4980474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4980694:1
position: 4980694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

position:4983182:1
position: 4983182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4983483:1
position: 4983483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

position:4986263:1
position: 4986263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4986358:1
position: 4986358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

position:4987472:1
position: 4987472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4987668:1
position: 4987668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

position:4990743:1
position: 4990743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4990827:1
position: 4990827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

position:4990923:1
position: 4990923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4991025:1
position: 4991025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996962:1:exon

position:4996743:1
position: 4996743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4996962:1
position: 4996962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

position:4997114:1
position: 4997114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4997217:1
position: 4997217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

position:4997324:1
position: 4997324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038747622.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4963250..4963287,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997799)
location: region:4963250-4997799:1
so has part: feature:4963250-4963287:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

position:4963250:1
position: 4963250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4963250-4963287:1:exon

position:4963287:1
position: 4963287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038747623.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4963296..4963533,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997799)
location: region:4963296-4997799:1
so has part: feature:4963296-4963533:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

position:4963296:1
position: 4963296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4963296-4963533:1:exon

position:4963533:1
position: 4963533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038747620.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4963296..4963527,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997799)
location: region:4963296-4997799:1
so has part: feature:4963296-4963527:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4963296-4963527:1:exon

position:4963527:1
position: 4963527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038747619.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4963296..4963504,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997799)
location: region:4963296-4997799:1
so has part: feature:4963296-4963504:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4963296-4963504:1:exon

position:4963504:1
position: 4963504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038747624.1
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4963296..4963504,4975015..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996782,4997114..4997217,4997324..4997799)
location: region:4963296-4997799:1
so has part: feature:4963296-4963504:1:exon
so has part: feature:4975015-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996782:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4963296-4963504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4975015-4975129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4996743-4996782:1:exon

position:4996782:1
position: 4996782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4997324-4997799:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGKDPVPPPPGASSSSSSWTAAGSHLHRPAPPPPPPPPLPSSLPHPAWRGALEPHAGDLGRGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603547.1
type: Protein
SIO_000068: ncbiprotein

position:4975024:1
position: 4975024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4997458:1
position: 4997458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGKDPVPPPPGASSSSSSWTAAGSHLHRPAPPPPPPPPLPSSLPHPAWRGALEPHAGDLGRGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGKDPVPPPPGASSSSSSWTAAGSHLHRPAPPPPPPPPLPSSLPHPAWRGALEPHAGDLGRGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGKDPVPPPPGASSSSSSWTAAGSHLHRPAPPPPPPPPLPSSLPHPAWRGALEPHAGDLGRGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGKDPVPPPPGASSSSSSWTAAGSHLHRPAPPPPPPPPLPSSLPHPAWRGALEPHAGDLGRGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996962,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996962:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X2
translation: MQGGKGFNPEKQNHAPRKLHHQPPMPANGQQANSQKRLCTLFPSDEGLTVDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTSFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMETARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRDEDIRRQQEELMRRQQEGYKGNFPDVREQEMRMSQLGMGGAMGMNSRGAVGGANVAAGAPNAPGPMMPDGAMGLTPPPNERFGQGGAMEGIGAMGAGTPGFGRGAPARDFDPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: join(4975024..4975129,4980474..4980694,4983182..4983483,4986263..4986358,4987472..4987668,4990743..4990827,4990923..4991025,4996743..4996782,4997114..4997217,4997324..4997458)
location: region:4975024-4997458:1
so has part: feature:4975024-4975129:1:exon
so has part: feature:4980474-4980694:1:exon
so has part: feature:4983182-4983483:1:exon
so has part: feature:4986263-4986358:1:exon
so has part: feature:4987472-4987668:1:exon
so has part: feature:4990743-4990827:1:exon
so has part: feature:4990923-4991025:1:exon
so has part: feature:4996743-4996782:1:exon
so has part: feature:4997114-4997217:1:exon
so has part: feature:4997324-4997458:1:exon

XP_038603552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4975024-4975129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4980474-4980694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4983182-4983483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4986263-4986358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4987472-4987668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4990743-4990827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990923-4991025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4996743-4996782:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4997114-4997217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4997324-4997458:1:exon

LOC119929864
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: LOC119929864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5004178..5011115
location: region:5004178-5011115:1
so has part: feature:5004178-5011115:1:exon
subclass of: SO_0000010

119929864
type: Gene
SIO_000068: ncbigene

position:5004178:1
position: 5004178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011115:1
position: 5011115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5004178-5011115:1:exon

LOC119929864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: LOC119929864
product: rho-related GTP-binding protein RhoG-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038748202.1
SIO_010081: LOC119929864
subclass of: SO_0000673
so part of: LOC119929864
location: join(5004178..5004195,5010335..5011115)
location: region:5004178-5011115:1
so has part: feature:5004178-5004195:1:exon
so has part: feature:5010335-5011115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5004178-5004195:1:exon

position:5004195:1
position: 5004195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5010335-5011115:1:exon

position:5010335:1
position: 5010335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119929864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: LOC119929864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoG-like
translation: MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQLSVDGRPVSLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSVGSPSSYANVRHKWHPEVAHHCPDVPVLLVGTKSDLRRDSETVRRLKEQSLAPTTPQQGAALAKQVGAVRYLECSALTQDGVREVFAAAVRAVLDPPAKRSAKKCVLL
SIO_010081: LOC119929864
subclass of: SO_0000673
so part of: LOC119929864
location: 5010452..5011027
location: region:5010452-5011027:1
so has part: feature:5010452-5011027:1:exon

XP_038604130.1
type: Protein
SIO_000068: ncbiprotein

position:5010452:1
position: 5010452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011027:1
position: 5011027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5010452-5011027:1:exon

TAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5022688..5093671
location: region:5022688-5093671:1
so has part: feature:5022688-5093671:1:exon
subclass of: SO_0000010

119929669
type: Gene
SIO_000068: ncbigene

position:5022688:1
position: 5022688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093671:1
position: 5093671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5022688-5093671:1:exon

TAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TAF1
product: TATA-box binding protein associated factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038747864.1
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022688..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064296..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088023..5088151,5088262..5088412,5088548..5088740,5093357..5093671)
location: region:5022688-5093671:1
so has part: feature:5022688-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
so has part: feature:5032230-5032346:1:exon
so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
so has part: feature:5037892-5038113:1:exon
so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
so has part: feature:5045485-5045832:1:exon
so has part: feature:5047610-5047714:1:exon
so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064296-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088023-5088151:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5022688-5022843:1:exon

position:5022843:1
position: 5022843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

position:5028384:1
position: 5028384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5028516:1
position: 5028516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

position:5030514:1
position: 5030514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030630:1
position: 5030630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

position:5032230:1
position: 5032230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5032346:1
position: 5032346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

position:5034421:1
position: 5034421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5034671:1
position: 5034671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

position:5037587:1
position: 5037587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037811:1
position: 5037811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

position:5037892:1
position: 5037892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5038113:1
position: 5038113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

position:5039938:1
position: 5039938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5040136:1
position: 5040136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

position:5041595:1
position: 5041595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5041771:1
position: 5041771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

position:5043251:1
position: 5043251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5043378:1
position: 5043378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

position:5045289:1
position: 5045289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5045396:1
position: 5045396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

position:5045485:1
position: 5045485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5045832:1
position: 5045832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5047610-5047714:1:exon

position:5047610:1
position: 5047610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5047714:1
position: 5047714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

position:5050654:1
position: 5050654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5050854:1
position: 5050854
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

position:5052120:1
position: 5052120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5052261:1
position: 5052261
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

position:5052377:1
position: 5052377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5052507:1
position: 5052507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

position:5057037:1
position: 5057037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5057117:1
position: 5057117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

position:5057231:1
position: 5057231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5057380:1
position: 5057380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

position:5058327:1
position: 5058327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058446:1
position: 5058446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

position:5058536:1
position: 5058536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058711:1
position: 5058711
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

position:5061131:1
position: 5061131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5061372:1
position: 5061372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5064296-5064512:1:exon

position:5064296:1
position: 5064296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5064512:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

position:5064834:1
position: 5064834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5064999:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

position:5067059:1
position: 5067059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5067270:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

position:5069248:1
position: 5069248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069356:1
position: 5069356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

position:5069563:1
position: 5069563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069661:1
position: 5069661
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

position:5071429:1
position: 5071429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5071606:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

position:5077793:1
position: 5077793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5077860:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

position:5079283:1
position: 5079283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5079405:1
position: 5079405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

position:5082752:1
position: 5082752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5082844:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

position:5082940:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5083024:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

position:5085487:1
position: 5085487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5085554:1
position: 5085554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

position:5085828:1
position: 5085828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5085944:1
position: 5085944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

position:5087754:1
position: 5087754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087879:1
position: 5087879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5088023-5088151:1:exon

position:5088023:1
position: 5088023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5088151:1
position: 5088151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5088262-5088412:1:exon

position:5088262:1
position: 5088262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5088412:1
position: 5088412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:5088548-5088740:1:exon

position:5088548:1
position: 5088548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5088740:1
position: 5088740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:5093357-5093671:1:exon

position:5093357:1
position: 5093357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TAF1
product: TATA-box binding protein associated factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038747862.1
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022688..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064296..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088262..5088412,5088548..5088740,5093357..5093671)
location: region:5022688-5093671:1
so has part: feature:5022688-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
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so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
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so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
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so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064296-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5022688-5022843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5047610-5047714:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5064296-5064512:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5088262-5088412:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5088548-5088740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5093357-5093671:1:exon

TAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: TAF1
product: TATA-box binding protein associated factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038747863.1
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022688..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064299..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088262..5088412,5088548..5088740,5093357..5093671)
location: region:5022688-5093671:1
so has part: feature:5022688-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
so has part: feature:5032230-5032346:1:exon
so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
so has part: feature:5037892-5038113:1:exon
so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
so has part: feature:5045485-5045832:1:exon
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so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064299-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5022688-5022843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

urn:…
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SIO_000628: feature:5047610-5047714:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5064299-5064512:1:exon

position:5064299:1
position: 5064299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5088262-5088412:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5088548-5088740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5093357-5093671:1:exon

TAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 1 isoform X3
translation: MSDSDSDEDSGGGGGPFSLAGFLFGNINESGQLEGESVLDKECKKHLAGLGALGLGSLITELTASQDDQDQDDQDAPDRTPVDEEGWVKSTEEAVDYSDISEMAEDESRRYRQVMGNLQLPGRSDDEDDYDADGDDIDAKLMPPPPAPPSPAKKDQEKDHGHSEAGDGIILPSIIAPSSAAAAAGAEKAESSSSSSDSESEAGPRAARLAEPKEGQLTLPLAGIMQHDVSKPLPCVTHLFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKPPPREAPPGGPPPDGEAGPGPQPAPSSPWVSEPAPPPPPEQCLSDDEITMMAPVESKLSQAAGAAAKVAESQPQVAEWRFGPARLWYDMLGVPEDGRGFDYGFRLKEPDDDQPGGRSPAPEEGGAAEETDLLANENFLMVTQLHWEDDIVWDGEDVKHKGTKPQRASLAGWLPSSMTRNATAYNAQQGVAAILDEDKPWYSIFPIDNEELVYGRWEDGIIWDAQAMVRLLEPPVLTLDPNDENLILEIPDEKEEATSTSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPLKLRQFHRPPLKKYSFGALSQPGPHPVQPLMKHIKKKAKVREQERQASGGGEMFFMRTAQDLTGRDGDLILAEYSEENPPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETIYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEVRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLASTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGDDGPHDKDKAKKDKRDRKGLAAGGPGGSGGSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYIRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKIKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPAKKKRRVGTTIHCDYLNRPHKSIHRRRTDPMVTLSSILESIINEIRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFRDHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVSPMDLDSVRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNTCYQTLAEYDEHLTQLERDICTAKEAALEEADLESLDPMTPGPYTPQPPDLYDNNTSLSVSRDASVYQDESNLSALDTPTTTPEKRGAQMRRGQGRLGQEDSDVDIEGFGEEEEEEDEEEEEEDGKPKTPAPEAEDGDDLGEEEEGAARRPQASVLYEDLLMSDGEDDDAAGSDEEGDNPFSSIQLSESGSDSDVEGGGGGGRAKQPRGLLQDGTRLGLGLDAEDTMLAYGGEPAGPPHAAEDSNISYGSSEEPDPKSGTRDTSYSSAGGYDVSEEEEEEEEEEEEEEEQPCGPSVLSRVALSEDEEDSEDFRSMAGESELDSDE
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022721..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064296..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088023..5088151,5088262..5088412,5088548..5088740,5093357..5093594)
location: region:5022721-5093594:1
so has part: feature:5022721-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
so has part: feature:5032230-5032346:1:exon
so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
so has part: feature:5037892-5038113:1:exon
so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
so has part: feature:5045485-5045832:1:exon
so has part: feature:5047610-5047714:1:exon
so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064296-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088023-5088151:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093594:1:exon

XP_038603792.1
type: Protein
SIO_000068: ncbiprotein

position:5022721:1
position: 5022721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093594:1
position: 5093594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5022721-5022843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5047610-5047714:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5064296-5064512:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5088023-5088151:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5088262-5088412:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5088548-5088740:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5093357-5093594:1:exon

TAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 1 isoform X1
translation: MSDSDSDEDSGGGGGPFSLAGFLFGNINESGQLEGESVLDKECKKHLAGLGALGLGSLITELTASQDDQDQDDQDAPDRTPVDEEGWVKSTEEAVDYSDISEMAEDESRRYRQVMGNLQLPGRSDDEDDYDADGDDIDAKLMPPPPAPPSPAKKDQEKDHGHSEAGDGIILPSIIAPSSAAAAAGAEKAESSSSSSDSESEAGPRAARLAEPKEGQLTLPLAGIMQHDVSKPLPCVTHLFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKPPPREAPPGGPPPDGEAGPGPQPAPSSPWVSEPAPPPPPEQCLSDDEITMMAPVESKLSQAAGAAAKVAESQPQVAEWRFGPARLWYDMLGVPEDGRGFDYGFRLKEPDDDQPGGRSPAPEEGGAAEETDLLANENFLMVTQLHWEDDIVWDGEDVKHKGTKPQRASLAGWLPSSMTRNATAYNAQQGVAAILDEDKPWYSIFPIDNEELVYGRWEDGIIWDAQAMVRLLEPPVLTLDPNDENLILEIPDEKEEATSTSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPLKLRQFHRPPLKKYSFGALSQPGPHPVQPLMKHIKKKAKVREQERQASGGGEMFFMRTAQDLTGRDGDLILAEYSEENPPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETIYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEVRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLASTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGDDGPHDKDKAKKDKRDRKGLAAGGPGGSGGSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYIRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKIKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPAKKKRRVGTTIHCDYLNRPHKSIHRRRTDPMVTLSSILESIINEIRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFRDHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVSPMDLDSVRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNTCYQTLAEYDEHLTQLERDICTAKEAALEEADLESLDPMTPGPYTPQPPDLYDNNTSLSVSRDASVYQDESNLSALDTPTTTPEKRGAQEAEDGDDLGEEEEGAARRPQASVLYEDLLMSDGEDDDAAGSDEEGDNPFSSIQLSESGSDSDVEGGGGGGRAKQPRGLLQDGTRLGLGLDAEDTMLAYGGEPAGPPHAAEDSNISYGSSEEPDPKSGTRDTSYSSAGGYDVSEEEEEEEEEEEEEEEQPCGPSVLSRVALSEDEEDSEDFRSMAGESELDSDE
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022721..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064296..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088262..5088412,5088548..5088740,5093357..5093594)
location: region:5022721-5093594:1
so has part: feature:5022721-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
so has part: feature:5032230-5032346:1:exon
so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
so has part: feature:5037892-5038113:1:exon
so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
so has part: feature:5045485-5045832:1:exon
so has part: feature:5047610-5047714:1:exon
so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064296-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093594:1:exon

XP_038603790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5022721-5022843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5047610-5047714:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5064296-5064512:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5088262-5088412:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5088548-5088740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5093357-5093594:1:exon

TAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 1 isoform X2
translation: MSDSDSDEDSGGGGGPFSLAGFLFGNINESGQLEGESVLDKECKKHLAGLGALGLGSLITELTASQDDQDQDDQDAPDRTPVDEEGWVKSTEEAVDYSDISEMAEDESRRYRQVMGNLQLPGRSDDEDDYDADGDDIDAKLMPPPPAPPSPAKKDQEKDHGHSEAGDGIILPSIIAPSSAAAAAGAEKAESSSSSSDSESEAGPRAARLAEPKEGQLTLPLAGIMQHDVSKPLPCVTHLFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKPPPREAPPGGPPPDGEAGPGPQPAPSSPWVSEPAPPPPPEQCLSDDEITMMAPVESKLSQAAGAAAKVAESQPQVAEWRFGPARLWYDMLGVPEDGRGFDYGFRLKEPDDDQPGGRSPAPEEGGAAEETDLLANENFLMVTQLHWEDDIVWDGEDVKHKGTKPQRASLAGWLPSSMTRNATAYNAQQGVAAILDEDKPWYSIFPIDNEELVYGRWEDGIIWDAQAMVRLLEPPVLTLDPNDENLILEIPDEKEEATSTSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPLKLRQFHRPPLKKYSFGALSQPGPHPVQPLMKHIKKKAKVREQERQASGGGEMFFMRTAQDLTGRDGDLILAEYSEENPPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETIYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEVRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLASTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGDDGPHDKDKAKKDKRDRKGLAGGPGGSGGSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYIRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKIKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPAKKKRRVGTTIHCDYLNRPHKSIHRRRTDPMVTLSSILESIINEIRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFRDHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVSPMDLDSVRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNTCYQTLAEYDEHLTQLERDICTAKEAALEEADLESLDPMTPGPYTPQPPDLYDNNTSLSVSRDASVYQDESNLSALDTPTTTPEKRGAQEAEDGDDLGEEEEGAARRPQASVLYEDLLMSDGEDDDAAGSDEEGDNPFSSIQLSESGSDSDVEGGGGGGRAKQPRGLLQDGTRLGLGLDAEDTMLAYGGEPAGPPHAAEDSNISYGSSEEPDPKSGTRDTSYSSAGGYDVSEEEEEEEEEEEEEEEQPCGPSVLSRVALSEDEEDSEDFRSMAGESELDSDE
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: join(5022721..5022843,5028384..5028516,5030514..5030630,5032230..5032346,5034421..5034671,5037587..5037811,5037892..5038113,5039938..5040136,5041595..5041771,5043251..5043378,5045289..5045396,5045485..5045832,5047610..5047714,5050654..5050854,5052120..5052261,5052377..5052507,5057037..5057117,5057231..5057380,5058327..5058446,5058536..5058711,5061131..5061372,5064299..5064512,5064834..5064999,5067059..5067270,5069248..5069356,5069563..5069661,5071429..5071606,5077793..5077860,5079283..5079405,5082752..5082844,5082940..5083024,5085487..5085554,5085828..5085944,5087754..5087879,5088262..5088412,5088548..5088740,5093357..5093594)
location: region:5022721-5093594:1
so has part: feature:5022721-5022843:1:exon
so has part: feature:5028384-5028516:1:exon
so has part: feature:5030514-5030630:1:exon
so has part: feature:5032230-5032346:1:exon
so has part: feature:5034421-5034671:1:exon
so has part: feature:5037587-5037811:1:exon
so has part: feature:5037892-5038113:1:exon
so has part: feature:5039938-5040136:1:exon
so has part: feature:5041595-5041771:1:exon
so has part: feature:5043251-5043378:1:exon
so has part: feature:5045289-5045396:1:exon
so has part: feature:5045485-5045832:1:exon
so has part: feature:5047610-5047714:1:exon
so has part: feature:5050654-5050854:1:exon
so has part: feature:5052120-5052261:1:exon
so has part: feature:5052377-5052507:1:exon
so has part: feature:5057037-5057117:1:exon
so has part: feature:5057231-5057380:1:exon
so has part: feature:5058327-5058446:1:exon
so has part: feature:5058536-5058711:1:exon
so has part: feature:5061131-5061372:1:exon
so has part: feature:5064299-5064512:1:exon
so has part: feature:5064834-5064999:1:exon
so has part: feature:5067059-5067270:1:exon
so has part: feature:5069248-5069356:1:exon
so has part: feature:5069563-5069661:1:exon
so has part: feature:5071429-5071606:1:exon
so has part: feature:5077793-5077860:1:exon
so has part: feature:5079283-5079405:1:exon
so has part: feature:5082752-5082844:1:exon
so has part: feature:5082940-5083024:1:exon
so has part: feature:5085487-5085554:1:exon
so has part: feature:5085828-5085944:1:exon
so has part: feature:5087754-5087879:1:exon
so has part: feature:5088262-5088412:1:exon
so has part: feature:5088548-5088740:1:exon
so has part: feature:5093357-5093594:1:exon

XP_038603791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5022721-5022843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5028384-5028516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030514-5030630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032230-5032346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034421-5034671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5037587-5037811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037892-5038113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5039938-5040136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5041595-5041771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043251-5043378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5045289-5045396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5045485-5045832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5047610-5047714:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5050654-5050854:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5052120-5052261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5052377-5052507:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5057037-5057117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5057231-5057380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5058327-5058446:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5058536-5058711:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5061131-5061372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5064299-5064512:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5064834-5064999:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5067059-5067270:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5069248-5069356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5069563-5069661:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5071429-5071606:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5077793-5077860:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5079283-5079405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5082752-5082844:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5082940-5083024:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5085487-5085554:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5085828-5085944:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5087754-5087879:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5088262-5088412:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5088548-5088740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5093357-5093594:1:exon

OGT
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5099710..5146201
location: region:5099710-5146201:1
so has part: feature:5099710-5146201:1:exon
subclass of: SO_0000010

119929668
type: Gene
SIO_000068: ncbigene

position:5099710:1
position: 5099710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5146201:1
position: 5146201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5099710-5146201:1:exon

OGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: OGT
product: O-linked N-acetylglucosamine (GlcNAc) transferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038747859.1
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5099710..5099821,5106279..5106459,5108867..5109110,5117275..5117343,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146201)
location: region:5099710-5146201:1
so has part: feature:5099710-5099821:1:exon
so has part: feature:5106279-5106459:1:exon
so has part: feature:5108867-5109110:1:exon
so has part: feature:5117275-5117343:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5099710-5099821:1:exon

position:5099821:1
position: 5099821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5106279-5106459:1:exon

position:5106279:1
position: 5106279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5106459:1
position: 5106459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5108867-5109110:1:exon

position:5108867:1
position: 5108867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5109110:1
position: 5109110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5117275-5117343:1:exon

position:5117275:1
position: 5117275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5117343:1
position: 5117343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5120701-5120817:1:exon

position:5120701:1
position: 5120701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5120817:1
position: 5120817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5121833-5121912:1:exon

position:5121833:1
position: 5121833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5121912:1
position: 5121912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5123171-5123366:1:exon

position:5123171:1
position: 5123171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5123366:1
position: 5123366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5127421-5127561:1:exon

position:5127421:1
position: 5127421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5127561:1
position: 5127561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5127644-5127744:1:exon

position:5127644:1
position: 5127644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5127744:1
position: 5127744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5129085-5129238:1:exon

position:5129085:1
position: 5129085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5129238:1
position: 5129238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5130447-5130548:1:exon

position:5130447:1
position: 5130447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5130548:1
position: 5130548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5130653-5130832:1:exon

position:5130653:1
position: 5130653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5130832:1
position: 5130832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5131484-5131642:1:exon

position:5131484:1
position: 5131484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131642:1
position: 5131642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5134024-5134113:1:exon

position:5134024:1
position: 5134024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5134113:1
position: 5134113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5136128-5136253:1:exon

position:5136128:1
position: 5136128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136253:1
position: 5136253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5136510-5136680:1:exon

position:5136510:1
position: 5136510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136680:1
position: 5136680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5136775-5136891:1:exon

position:5136775:1
position: 5136775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136891:1
position: 5136891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5136977-5137144:1:exon

position:5136977:1
position: 5136977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5137144:1
position: 5137144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5138650-5138802:1:exon

position:5138650:1
position: 5138650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5138802:1
position: 5138802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5141092-5141344:1:exon

position:5141092:1
position: 5141092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5141344:1
position: 5141344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5141430-5141553:1:exon

position:5141430:1
position: 5141430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5141553:1
position: 5141553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5146003-5146201:1:exon

position:5146003:1
position: 5146003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: OGT
product: O-linked N-acetylglucosamine (GlcNAc) transferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038747860.1
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5099710..5099821,5106309..5106459,5108867..5109110,5117275..5117343,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146201)
location: region:5099710-5146201:1
so has part: feature:5099710-5099821:1:exon
so has part: feature:5106309-5106459:1:exon
so has part: feature:5108867-5109110:1:exon
so has part: feature:5117275-5117343:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5099710-5099821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5106309-5106459:1:exon

position:5106309:1
position: 5106309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5108867-5109110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5117275-5117343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5120701-5120817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5121833-5121912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5123171-5123366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5127421-5127561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5127644-5127744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5129085-5129238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5130447-5130548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5130653-5130832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5131484-5131642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5134024-5134113:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5136128-5136253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5136510-5136680:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5136775-5136891:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5136977-5137144:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5138650-5138802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5141092-5141344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5141430-5141553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5146003-5146201:1:exon

OGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1
translation: MASSVGNVADSTEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKVSEGRLRVGYVSSDFGNHPTSHLMQSIPGMHNSDKFEVFCYALSPDDGTNFRVKVMAEANHFVDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPSTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNGDGGPALSMPVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTVIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQSRIVFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLDYLKLIRSKVWKQRLSSPLFNTKQYTAELERLYLQMWEHYASGNKPDHMIKAPEPTESA
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5099785..5099821,5106279..5106459,5108867..5109110,5117275..5117343,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146177)
location: region:5099785-5146177:1
so has part: feature:5099785-5099821:1:exon
so has part: feature:5106279-5106459:1:exon
so has part: feature:5108867-5109110:1:exon
so has part: feature:5117275-5117343:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146177:1:exon

XP_038603787.1
type: Protein
SIO_000068: ncbiprotein

position:5099785:1
position: 5099785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5146177:1
position: 5146177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5099785-5099821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5106279-5106459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5108867-5109110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5117275-5117343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5120701-5120817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5121833-5121912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5123171-5123366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5127421-5127561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5127644-5127744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5129085-5129238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5130447-5130548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5130653-5130832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5131484-5131642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5134024-5134113:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5136128-5136253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5136510-5136680:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5136775-5136891:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5136977-5137144:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5138650-5138802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5141092-5141344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5141430-5141553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5146003-5146177:1:exon

OGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2
translation: MASSVGNVADSTGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKVSEGRLRVGYVSSDFGNHPTSHLMQSIPGMHNSDKFEVFCYALSPDDGTNFRVKVMAEANHFVDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPSTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNGDGGPALSMPVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTVIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQSRIVFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLDYLKLIRSKVWKQRLSSPLFNTKQYTAELERLYLQMWEHYASGNKPDHMIKAPEPTESA
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5099785..5099821,5106309..5106459,5108867..5109110,5117275..5117343,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146177)
location: region:5099785-5146177:1
so has part: feature:5099785-5099821:1:exon
so has part: feature:5106309-5106459:1:exon
so has part: feature:5108867-5109110:1:exon
so has part: feature:5117275-5117343:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146177:1:exon

XP_038603788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5099785-5099821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5106309-5106459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5108867-5109110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5117275-5117343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5120701-5120817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5121833-5121912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5123171-5123366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5127421-5127561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5127644-5127744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5129085-5129238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5130447-5130548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5130653-5130832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5131484-5131642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5134024-5134113:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5136128-5136253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5136510-5136680:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5136775-5136891:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5136977-5137144:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5138650-5138802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5141092-5141344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5141430-5141553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5146003-5146177:1:exon

OGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: OGT
product: O-linked N-acetylglucosamine (GlcNAc) transferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038747861.1
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5119048..5119347,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146201)
location: region:5119048-5146201:1
so has part: feature:5119048-5119347:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146201:1:exon

position:5119048:1
position: 5119048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5119048-5119347:1:exon

position:5119347:1
position: 5119347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5120701-5120817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5121833-5121912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5123171-5123366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5127421-5127561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5127644-5127744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5129085-5129238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5130447-5130548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5130653-5130832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5131484-5131642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5134024-5134113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5136128-5136253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5136510-5136680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5136775-5136891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5136977-5137144:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5138650-5138802:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5141092-5141344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5141430-5141553:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5146003-5146201:1:exon

OGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3
translation: MACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKVSEGRLRVGYVSSDFGNHPTSHLMQSIPGMHNSDKFEVFCYALSPDDGTNFRVKVMAEANHFVDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPSTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNGDGGPALSMPVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTVIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQSRIVFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLDYLKLIRSKVWKQRLSSPLFNTKQYTAELERLYLQMWEHYASGNKPDHMIKAPEPTESA
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: join(5119345..5119347,5120701..5120817,5121833..5121912,5123171..5123366,5127421..5127561,5127644..5127744,5129085..5129238,5130447..5130548,5130653..5130832,5131484..5131642,5134024..5134113,5136128..5136253,5136510..5136680,5136775..5136891,5136977..5137144,5138650..5138802,5141092..5141344,5141430..5141553,5146003..5146177)
location: region:5119345-5146177:1
so has part: feature:5119345-5119347:1:exon
so has part: feature:5120701-5120817:1:exon
so has part: feature:5121833-5121912:1:exon
so has part: feature:5123171-5123366:1:exon
so has part: feature:5127421-5127561:1:exon
so has part: feature:5127644-5127744:1:exon
so has part: feature:5129085-5129238:1:exon
so has part: feature:5130447-5130548:1:exon
so has part: feature:5130653-5130832:1:exon
so has part: feature:5131484-5131642:1:exon
so has part: feature:5134024-5134113:1:exon
so has part: feature:5136128-5136253:1:exon
so has part: feature:5136510-5136680:1:exon
so has part: feature:5136775-5136891:1:exon
so has part: feature:5136977-5137144:1:exon
so has part: feature:5138650-5138802:1:exon
so has part: feature:5141092-5141344:1:exon
so has part: feature:5141430-5141553:1:exon
so has part: feature:5146003-5146177:1:exon

XP_038603789.1
type: Protein
SIO_000068: ncbiprotein

position:5119345:1
position: 5119345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5119345-5119347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5120701-5120817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5121833-5121912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5123171-5123366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5127421-5127561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5127644-5127744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5129085-5129238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5130447-5130548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5130653-5130832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5131484-5131642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5134024-5134113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5136128-5136253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5136510-5136680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5136775-5136891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5136977-5137144:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5138650-5138802:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5141092-5141344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5141430-5141553:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5146003-5146177:1:exon

GCNA
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: GCNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5157865..5179705
location: region:5157865-5179705:1
so has part: feature:5157865-5179705:1:exon
subclass of: SO_0000010

119929946
type: Gene
SIO_000068: ncbigene

position:5157865:1
position: 5157865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5179705:1
position: 5179705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5157865-5179705:1:exon

GCNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GCNA
product: germ cell nuclear acidic peptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038748324.1
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: join(5157865..5157941,5159166..5159212,5165413..5165470,5167301..5167386,5169731..5169997,5171475..5171768,5173199..5173310,5175735..5175882,5177302..5177431,5177514..5177718,5179412..5179705)
location: region:5157865-5179705:1
so has part: feature:5157865-5157941:1:exon
so has part: feature:5159166-5159212:1:exon
so has part: feature:5165413-5165470:1:exon
so has part: feature:5167301-5167386:1:exon
so has part: feature:5169731-5169997:1:exon
so has part: feature:5171475-5171768:1:exon
so has part: feature:5173199-5173310:1:exon
so has part: feature:5175735-5175882:1:exon
so has part: feature:5177302-5177431:1:exon
so has part: feature:5177514-5177718:1:exon
so has part: feature:5179412-5179705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5157865-5157941:1:exon

position:5157941:1
position: 5157941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5159166-5159212:1:exon

position:5159166:1
position: 5159166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5159212:1
position: 5159212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5165413-5165470:1:exon

position:5165413:1
position: 5165413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5165470:1
position: 5165470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5167301-5167386:1:exon

position:5167301:1
position: 5167301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167386:1
position: 5167386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5169731-5169997:1:exon

position:5169731:1
position: 5169731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5169997:1
position: 5169997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5171475-5171768:1:exon

position:5171475:1
position: 5171475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5171768:1
position: 5171768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5173199-5173310:1:exon

position:5173199:1
position: 5173199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173310:1
position: 5173310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5175735-5175882:1:exon

position:5175735:1
position: 5175735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5175882:1
position: 5175882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5177302-5177431:1:exon

position:5177302:1
position: 5177302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5177431:1
position: 5177431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5177514-5177718:1:exon

position:5177514:1
position: 5177514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5177718:1
position: 5177718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5179412-5179705:1:exon

position:5179412:1
position: 5179412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GCNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: GCNA
product: germ cell nuclear acidic peptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038748325.1
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: join(5157865..5157941,5159166..5159212,5165413..5165470,5167301..5167386,5169731..5169997,5173199..5173310,5175735..5175882,5177302..5177431,5177514..5177718,5179412..5179705)
location: region:5157865-5179705:1
so has part: feature:5157865-5157941:1:exon
so has part: feature:5159166-5159212:1:exon
so has part: feature:5165413-5165470:1:exon
so has part: feature:5167301-5167386:1:exon
so has part: feature:5169731-5169997:1:exon
so has part: feature:5173199-5173310:1:exon
so has part: feature:5175735-5175882:1:exon
so has part: feature:5177302-5177431:1:exon
so has part: feature:5177514-5177718:1:exon
so has part: feature:5179412-5179705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5157865-5157941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5159166-5159212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5165413-5165470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5167301-5167386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169731-5169997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5173199-5173310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5175735-5175882:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5177302-5177431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5177514-5177718:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5179412-5179705:1:exon

GCNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GCNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic repeat-containing protein isoform X1
translation: MAEAEEEGGPPDHQKKSPDFPSGSGSDEEFELLLWQLRTPRTLGSRRKAGGRLRDVLDSDQEPSPSASYRTRRPRGVTGATPARPEPPVTPAQRSCGALSDGEEGSSEGPAPEDGEEAAERPGGEAGLPLPASAGPDPDSSEDEFESLVHLIPRPARGPARTPRTPSIRAPARLEPPAAPARRSCGALSDGEEGSSESPAPGDGEEAAERPGGEAGPPLPASTGPDSSEDEFESLVHLIPRPARDPARTPRTPSIRGARTPRTPSIRGPGKEASTPPSGVRKASPSSSPRDRRDAEDSTPLPNFKWARGCSVPDCFLPQISAAPWAHGRKFQEEKKRLVRRLYQLYNTSVFDSKLPEDMEISWNKKLRMTAGFCATGQKDGRRHARIELSEKVCDSAERLRDTVIHEMCHAATWLVFGIRAAHGPTWKAFARKAAALHPELPRVTRCHSYQINYKFTYECARCGHRIGRHSKSLDPQRHVCGRCLGPLALLPQAGKGDGGTPRPLTPFARFVKSHYASTRRELAGQSHGEIMRQLGADFASKVRLQEP
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: join(5157892..5157941,5159166..5159212,5165413..5165470,5167301..5167386,5169731..5169997,5171475..5171768,5173199..5173310,5175735..5175882,5177302..5177431,5177514..5177718,5179412..5179661)
location: region:5157892-5179661:1
so has part: feature:5157892-5157941:1:exon
so has part: feature:5159166-5159212:1:exon
so has part: feature:5165413-5165470:1:exon
so has part: feature:5167301-5167386:1:exon
so has part: feature:5169731-5169997:1:exon
so has part: feature:5171475-5171768:1:exon
so has part: feature:5173199-5173310:1:exon
so has part: feature:5175735-5175882:1:exon
so has part: feature:5177302-5177431:1:exon
so has part: feature:5177514-5177718:1:exon
so has part: feature:5179412-5179661:1:exon

XP_038604252.1
type: Protein
SIO_000068: ncbiprotein

position:5157892:1
position: 5157892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5179661:1
position: 5179661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5157892-5157941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5159166-5159212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5165413-5165470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5167301-5167386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169731-5169997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5171475-5171768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5173199-5173310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5175735-5175882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5177302-5177431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5177514-5177718:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5179412-5179661:1:exon

GCNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: GCNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic repeat-containing protein isoform X2
translation: MAEAEEEGGPPDHQKKSPDFPSGSGSDEEFELLLWQLRTPRTLGSRRKAGGRLRDVLDSDQEPSPSASYRTRRPRGVTGATPARPEPPVTPAQRSCGALSDGEEGSSEGPAPEDGEEAAERPGGEAGLPLPASAGPDPDSSEDEFESLVHLIPRPARGPARTPRTPSIRGPGKEASTPPSGVRKASPSSSPRDRRDAEDSTPLPNFKWARGCSVPDCFLPQISAAPWAHGRKFQEEKKRLVRRLYQLYNTSVFDSKLPEDMEISWNKKLRMTAGFCATGQKDGRRHARIELSEKVCDSAERLRDTVIHEMCHAATWLVFGIRAAHGPTWKAFARKAAALHPELPRVTRCHSYQINYKFTYECARCGHRIGRHSKSLDPQRHVCGRCLGPLALLPQAGKGDGGTPRPLTPFARFVKSHYASTRRELAGQSHGEIMRQLGADFASKVRLQEP
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: join(5157892..5157941,5159166..5159212,5165413..5165470,5167301..5167386,5169731..5169997,5173199..5173310,5175735..5175882,5177302..5177431,5177514..5177718,5179412..5179661)
location: region:5157892-5179661:1
so has part: feature:5157892-5157941:1:exon
so has part: feature:5159166-5159212:1:exon
so has part: feature:5165413-5165470:1:exon
so has part: feature:5167301-5167386:1:exon
so has part: feature:5169731-5169997:1:exon
so has part: feature:5173199-5173310:1:exon
so has part: feature:5175735-5175882:1:exon
so has part: feature:5177302-5177431:1:exon
so has part: feature:5177514-5177718:1:exon
so has part: feature:5179412-5179661:1:exon

XP_038604253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5157892-5157941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5159166-5159212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5165413-5165470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5167301-5167386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169731-5169997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5173199-5173310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5175735-5175882:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5177302-5177431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5177514-5177718:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5179412-5179661:1:exon

CXCR3
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: CXCR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5179990..5238104)
location: region:5179990-5238104:-1
so has part: feature:5179990-5238104:-1:exon
subclass of: SO_0000010

119930007
type: Gene
SIO_000068: ncbigene

position:5179990:-1
position: 5179990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238104:-1
position: 5238104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5179990-5238104:-1:exon

CXCR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: CXCR3
product: C-X-C motif chemokine receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748413.1
SIO_010081: CXCR3
subclass of: SO_0000673
so part of: CXCR3
location: complement(join(5179990..5181120,5181179..5181250,5185318..5185452,5211327..5211475,5236632..5236671,5236937..5237119,5238075..5238104))
location: region:5179990-5238104:-1
so has part: feature:5238075-5238104:-1:exon
so has part: feature:5236937-5237119:-1:exon
so has part: feature:5236632-5236671:-1:exon
so has part: feature:5211327-5211475:-1:exon
so has part: feature:5185318-5185452:-1:exon
so has part: feature:5181179-5181250:-1:exon
so has part: feature:5179990-5181120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5238075-5238104:-1:exon

position:5238075:-1
position: 5238075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5236937-5237119:-1:exon

position:5236937:-1
position: 5236937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5237119:-1
position: 5237119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5236632-5236671:-1:exon

position:5236632:-1
position: 5236632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5236671:-1
position: 5236671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5211327-5211475:-1:exon

position:5211327:-1
position: 5211327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5211475:-1
position: 5211475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5185318-5185452:-1:exon

position:5185318:-1
position: 5185318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5185452:-1
position: 5185452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5181179-5181250:-1:exon

position:5181179:-1
position: 5181179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5181250:-1
position: 5181250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5179990-5181120:-1:exon

position:5181120:-1
position: 5181120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CXCR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: CXCR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 3
translation: MPGAKLGATGCHFSWSKTRLDARKGTAVQSAHVLSMDEMSREHCRTRQEVCGMLKGPTPLGIRDSGKQRGPTLSSREAPDPHFEALDPLQSTSSAPSHELQDAAGGNLDIRPTASIFISSLPARTPPGDTISPCNGDDSSSDNSHRTDGRAGTTPRVPPESLPASRPLGRSGTAAMEQWYGARLGKYRLKKENANGRPPRFPGEDGHLTVEDLEFLENVSFPYNATDWADSTCCPSPPCGPEARLAVDRGLLPALYGLLFLLGLLGNGAVAAVLLGRRGPPLGGTDTFLLHLVAADALLVLTLPLWAAEAARGWLFGAALCKLAGALFSVNFYAGAFLLVCIGFDRYLGVVRAPRLYRWGPRGRAPRTCWAVWGLSALLALPDLLFLSARAEPRLNATRCLHLFPPAGRTALQLLQFGAGFLLPLLAMGYCYARILAVLLGSRGRGRRRRRATRLVVAVVAVFALCWTPYHLVVLADVLVDLGALARDCGREARLDAARSVASGLGYLHSCLNPLLYAFVGDKFRARLRLLLARWGYPGEGRRWGASDSSRSEPTEATHSAPEAAPTGGGRRRPDEPDP
SIO_010081: CXCR3
subclass of: SO_0000673
so part of: CXCR3
location: complement(join(5179990..5181120,5181179..5181250,5185318..5185452,5211327..5211475,5236632..5236671,5236937..5237119,5238075..5238104))
location: region:5179990-5238104:-1
so has part: feature:5238075-5238104:-1:exon
so has part: feature:5236937-5237119:-1:exon
so has part: feature:5236632-5236671:-1:exon
so has part: feature:5211327-5211475:-1:exon
so has part: feature:5185318-5185452:-1:exon
so has part: feature:5181179-5181250:-1:exon
so has part: feature:5179990-5181120:-1:exon

XP_038604341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5238075-5238104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5236937-5237119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236632-5236671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5211327-5211475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5185318-5185452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5181179-5181250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5179990-5181120:-1:exon

AIFM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: AIFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5238177..5256758)
location: region:5238177-5256758:-1
so has part: feature:5238177-5256758:-1:exon
subclass of: SO_0000010

119929752
type: Gene
SIO_000068: ncbigene

position:5238177:-1
position: 5238177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5256758:-1
position: 5256758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5238177-5256758:-1:exon

AIFM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: AIFM1
product: apoptosis inducing factor mitochondria associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748020.1
SIO_010081: AIFM1
subclass of: SO_0000673
so part of: AIFM1
location: complement(join(5238177..5238354,5238468..5238664,5238790..5238914,5239005..5239147,5242215..5242355,5243272..5243360,5243446..5243559,5243775..5243883,5244123..5244199,5244734..5244818,5246113..5246203,5246898..5247028,5250488..5250612,5250786..5250879,5253042..5253184,5256690..5256758))
location: region:5238177-5256758:-1
so has part: feature:5256690-5256758:-1:exon
so has part: feature:5253042-5253184:-1:exon
so has part: feature:5250786-5250879:-1:exon
so has part: feature:5250488-5250612:-1:exon
so has part: feature:5246898-5247028:-1:exon
so has part: feature:5246113-5246203:-1:exon
so has part: feature:5244734-5244818:-1:exon
so has part: feature:5244123-5244199:-1:exon
so has part: feature:5243775-5243883:-1:exon
so has part: feature:5243446-5243559:-1:exon
so has part: feature:5243272-5243360:-1:exon
so has part: feature:5242215-5242355:-1:exon
so has part: feature:5239005-5239147:-1:exon
so has part: feature:5238790-5238914:-1:exon
so has part: feature:5238468-5238664:-1:exon
so has part: feature:5238177-5238354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5256690-5256758:-1:exon

position:5256690:-1
position: 5256690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5253042-5253184:-1:exon

position:5253042:-1
position: 5253042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5253184:-1
position: 5253184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5250786-5250879:-1:exon

position:5250786:-1
position: 5250786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5250879:-1
position: 5250879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5250488-5250612:-1:exon

position:5250488:-1
position: 5250488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5250612:-1
position: 5250612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5246898-5247028:-1:exon

position:5246898:-1
position: 5246898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5247028:-1
position: 5247028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5246113-5246203:-1:exon

position:5246113:-1
position: 5246113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5246203:-1
position: 5246203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5244734-5244818:-1:exon

position:5244734:-1
position: 5244734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244818:-1
position: 5244818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5244123-5244199:-1:exon

position:5244123:-1
position: 5244123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244199:-1
position: 5244199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5243775-5243883:-1:exon

position:5243775:-1
position: 5243775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5243883:-1
position: 5243883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5243446-5243559:-1:exon

position:5243446:-1
position: 5243446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5243559:-1
position: 5243559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5243272-5243360:-1:exon

position:5243272:-1
position: 5243272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5243360:-1
position: 5243360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5242215-5242355:-1:exon

position:5242215:-1
position: 5242215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5242355:-1
position: 5242355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5239005-5239147:-1:exon

position:5239005:-1
position: 5239005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5239147:-1
position: 5239147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5238790-5238914:-1:exon

position:5238790:-1
position: 5238790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238914:-1
position: 5238914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5238468-5238664:-1:exon

position:5238468:-1
position: 5238468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238664:-1
position: 5238664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5238177-5238354:-1:exon

position:5238354:-1
position: 5238354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AIFM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: AIFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-inducing factor 1, mitochondrial
translation: MSMFPRLVALVRPGQGRPAGLLWRRWTGPLELSPAPQMSTSGPPGGRVNSSGLFFFVGLSALGAGVYAYRTVKEDQRRYEERLAGLGRTPEEKRAAAAGGPGAAGPLPQAPTHAPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPDLPYMRPPLSKELWFSDDPQVTETLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLSGRKVVQLDVRANVAKLSDGAQISYEKCLIATGGTPRNLPAISRAGPDVKKRTTLFRKIEDFRALEKISREGKSIAIIGGGFLGSELACALGRKARASGSAAEVVQVFPESGNMGKILPEYLSSWTTERVRKEGAKVLTGAVVQAVDFRGGKVVIELKDGRKVETDHIVAAVGLEPNVELAKSGGLEVDSDFGGFRVNAELQARSNIWVAGDAASFYDLKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAKDSPRSATEQSGTGIRSESETESEASDVSVPAGGSAGPQAPRPGEDYGKGVVFYLRDKVVVGILLWNIFNRMPIARKIIKDGEEHEDLNEVAKLFSIHED
SIO_010081: AIFM1
subclass of: SO_0000673
so part of: AIFM1
location: complement(join(5238283..5238354,5238468..5238664,5238790..5238914,5239005..5239147,5242215..5242355,5243272..5243360,5243446..5243559,5243775..5243883,5244123..5244199,5244734..5244818,5246113..5246203,5246898..5247028,5250488..5250612,5250786..5250879,5253042..5253184,5256690..5256747))
location: region:5238283-5256747:-1
so has part: feature:5256690-5256747:-1:exon
so has part: feature:5253042-5253184:-1:exon
so has part: feature:5250786-5250879:-1:exon
so has part: feature:5250488-5250612:-1:exon
so has part: feature:5246898-5247028:-1:exon
so has part: feature:5246113-5246203:-1:exon
so has part: feature:5244734-5244818:-1:exon
so has part: feature:5244123-5244199:-1:exon
so has part: feature:5243775-5243883:-1:exon
so has part: feature:5243446-5243559:-1:exon
so has part: feature:5243272-5243360:-1:exon
so has part: feature:5242215-5242355:-1:exon
so has part: feature:5239005-5239147:-1:exon
so has part: feature:5238790-5238914:-1:exon
so has part: feature:5238468-5238664:-1:exon
so has part: feature:5238283-5238354:-1:exon

XP_038603948.1
type: Protein
SIO_000068: ncbiprotein

position:5238283:-1
position: 5238283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5256747:-1
position: 5256747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256690-5256747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5253042-5253184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250786-5250879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5250488-5250612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5246898-5247028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5246113-5246203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5244734-5244818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5244123-5244199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5243775-5243883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5243446-5243559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5243272-5243360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5242215-5242355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5239005-5239147:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5238790-5238914:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5238468-5238664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5238283-5238354:-1:exon

MARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: MARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5256749..5274925
location: region:5256749-5274925:1
so has part: feature:5256749-5274925:1:exon
subclass of: SO_0000010

119930008
type: Gene
SIO_000068: ncbigene

position:5256749:1
position: 5256749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5274925:1
position: 5274925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256749-5274925:1:exon

MARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: MARS2
product: methionyl-tRNA synthetase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748414.1
SIO_010081: MARS2
subclass of: SO_0000673
so part of: MARS2
location: join(5256749..5256777,5256867..5257090,5258901..5259060,5265612..5265997,5270394..5270728,5273477..5274925)
location: region:5256749-5274925:1
so has part: feature:5256749-5256777:1:exon
so has part: feature:5256867-5257090:1:exon
so has part: feature:5258901-5259060:1:exon
so has part: feature:5265612-5265997:1:exon
so has part: feature:5270394-5270728:1:exon
so has part: feature:5273477-5274925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5256749-5256777:1:exon

position:5256777:1
position: 5256777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5256867-5257090:1:exon

position:5256867:1
position: 5256867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5257090:1
position: 5257090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5258901-5259060:1:exon

position:5258901:1
position: 5258901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5259060:1
position: 5259060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5265612-5265997:1:exon

position:5265612:1
position: 5265612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5265997:1
position: 5265997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5270394-5270728:1:exon

position:5270394:1
position: 5270394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5270728:1
position: 5270728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5273477-5274925:1:exon

position:5273477:1
position: 5273477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: MARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine--tRNA ligase, mitochondrial
translation: MAAAAVEASSRALIGRRSPRPARSLAAPPKCACANPLMLLRAREPPPTPRAHWTRERRPAAAVRLRQPRPAALRLRHPYMPIPICPRAHWTREPGALQCACASPTCAFDRRSPRARCSSPAHTPGPRAHWTRDPGAPHPGASPPKRSSRSHWRRGPAAPLSDWAAGEAGGVARASGAPCACAPLHAVPGLVMLRAGLRGALRGGLGGTPPPPPLPPPPRRPRACITTPIFYVNAAPHIGHLYSALLADALARHRRLKCPDPILLSTGTDEHGLKIQQAAASSGLSPPDFCERNSARFRRLFEQAGVSFGDFVRTSEDRHRRAVDHFWARLAERDLLYKGHYRGWYSTADEAFLPQDRVAWRPGPAGDTVPVSLDSGHPVQWTEEENYMFRLSRFRAPLLRWLRDDPSAVAPEPFRQTVLGWLREELPDLSVSRERSRLHWGIPVPGDPTQTVYVWLDALVSYLTVSGYPGPGPADTCHVVGKDILRFHAVYWPALLLAAGLPPPRRIRVHSHWTVGGRKMSKSLGNAVDPGACLDRFTVDGFRYFLLRQGVPSRDGDFSPERAEGLVNAELADALGGLLNRCTAPALNPAGTFPRFRRSRFAARARPEDRALVEAVAALPGLVAAHFDDFRIYRALEAVADCVRQANGFVQRHAPWRLSRDHPDEGPWADTVLHVALESLRVFGTLLQPVVPATAHRLLSRLGVAPAERGLGAVDFLPAGRGLPCPFEGRGLGPDTGVLFPRLDGAGGRLAR
SIO_010081: MARS2
subclass of: SO_0000673
so part of: MARS2
location: join(5256749..5256777,5256867..5257090,5258901..5259060,5265612..5265997,5270394..5270728,5273477..5274601)
location: region:5256749-5274601:1
so has part: feature:5256749-5256777:1:exon
so has part: feature:5256867-5257090:1:exon
so has part: feature:5258901-5259060:1:exon
so has part: feature:5265612-5265997:1:exon
so has part: feature:5270394-5270728:1:exon
so has part: feature:5273477-5274601:1:exon

XP_038604342.1
type: Protein
SIO_000068: ncbiprotein

position:5274601:1
position: 5274601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256749-5256777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5256867-5257090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5258901-5259060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5265612-5265997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5270394-5270728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5273477-5274601:1:exon

RAB33A
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: RAB33A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5277636..5282945
location: region:5277636-5282945:1
so has part: feature:5277636-5282945:1:exon
subclass of: SO_0000010

119930009
type: Gene
SIO_000068: ncbigene

position:5277636:1
position: 5277636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5282945:1
position: 5282945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5277636-5282945:1:exon

RAB33A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: RAB33A
product: RAB33A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038748415.1
SIO_010081: RAB33A
subclass of: SO_0000673
so part of: RAB33A
location: join(5277636..5277839,5282339..5282945)
location: region:5277636-5282945:1
so has part: feature:5277636-5277839:1:exon
so has part: feature:5282339-5282945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5277636-5277839:1:exon

position:5277839:1
position: 5277839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5282339-5282945:1:exon

position:5282339:1
position: 5282339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB33A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: RAB33A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-33A
translation: MSRAGGRSEPEAGAQTRIFKIIVIGDSNVGKTCLAFRFCGGAFPDTTEATIGVDFREKTVDIDGETIKVQVWDTAGQERFRRTMVEHYYRNVHAVVFVYDVTKMASFANLEAWIQECEGHAVPPRVPRVLVGNKCDLRSEIQVPSSAALRFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSLIYRDLDGPVGRGQTLQVTGVTNTKTTCPC
SIO_010081: RAB33A
subclass of: SO_0000673
so part of: RAB33A
location: join(5277636..5277839,5282339..5282794)
location: region:5277636-5282794:1
so has part: feature:5277636-5277839:1:exon
so has part: feature:5282339-5282794:1:exon

XP_038604343.1
type: Protein
SIO_000068: ncbiprotein

position:5282794:1
position: 5282794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5277636-5277839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5282339-5282794:1:exon

SLC25A14
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: SLC25A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5289038..5311186
location: region:5289038-5311186:1
so has part: feature:5289038-5311186:1:exon
subclass of: SO_0000010

119929725
type: Gene
SIO_000068: ncbigene

position:5289038:1
position: 5289038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5311186:1
position: 5311186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5289038-5311186:1:exon

SLC25A14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC25A14
product: solute carrier family 25 member 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038747967.1
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5289038..5289076,5291306..5291427,5302642..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5311186)
location: region:5289038-5311186:1
so has part: feature:5289038-5289076:1:exon
so has part: feature:5291306-5291427:1:exon
so has part: feature:5302642-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5311186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5289038-5289076:1:exon

position:5289076:1
position: 5289076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5291306-5291427:1:exon

position:5291306:1
position: 5291306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5291427:1
position: 5291427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5302642-5302789:1:exon

position:5302642:1
position: 5302642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5302789:1
position: 5302789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5302972-5303066:1:exon

position:5302972:1
position: 5302972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5303066:1
position: 5303066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5304631-5304716:1:exon

position:5304631:1
position: 5304631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5304716:1
position: 5304716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5305650-5305745:1:exon

position:5305650:1
position: 5305650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5305745:1
position: 5305745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5306193-5306317:1:exon

position:5306193:1
position: 5306193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5306317:1
position: 5306317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5306738-5306873:1:exon

position:5306738:1
position: 5306738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5306873:1
position: 5306873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5309020-5309100:1:exon

position:5309020:1
position: 5309020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5309100:1
position: 5309100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5310876-5311186:1:exon

position:5310876:1
position: 5310876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC25A14
product: solute carrier family 25 member 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038747970.1
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5291341..5291427,5302680..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5311186)
location: region:5291341-5311186:1
so has part: feature:5291341-5291427:1:exon
so has part: feature:5302680-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5311186:1:exon

position:5291341:1
position: 5291341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291341-5291427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302680-5302789:1:exon

position:5302680:1
position: 5302680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310876-5311186:1:exon

SLC25A14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC25A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain mitochondrial carrier protein 1 isoform X1
translation: MSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYKGMFHALFRIWKEEGLLALYSGIAPALLRQASYGTIKIGIYQSLKKLFVDRLEDETLLINMICGVVSGVISSTLANPTDVLKIRMQAQGSLFQGGMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIMSGLMGDTILAHFVSSFTCGLAGAVASNPVDVVRTRMMNQRAIVGSVELYSGTLDGLLKTWKSEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLPF
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5291364..5291427,5302642..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5310917)
location: region:5291364-5310917:1
so has part: feature:5291364-5291427:1:exon
so has part: feature:5302642-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5310917:1:exon

XP_038603895.1
type: Protein
SIO_000068: ncbiprotein

position:5291364:1
position: 5291364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5310917:1
position: 5310917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291364-5291427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302642-5302789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310876-5310917:1:exon

SLC25A14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC25A14
product: solute carrier family 25 member 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038747968.1
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5298344..5298456,5302680..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5311186)
location: region:5298344-5311186:1
so has part: feature:5298344-5298456:1:exon
so has part: feature:5302680-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5311186:1:exon

position:5298344:1
position: 5298344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5298344-5298456:1:exon

position:5298456:1
position: 5298456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5302680-5302789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310876-5311186:1:exon

SLC25A14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: SLC25A14
product: solute carrier family 25 member 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038747969.1
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5298397..5298456,5302642..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5311186)
location: region:5298397-5311186:1
so has part: feature:5298397-5298456:1:exon
so has part: feature:5302642-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5311186:1:exon

position:5298397:1
position: 5298397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5298397-5298456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302642-5302789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310876-5311186:1:exon

SLC25A14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC25A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain mitochondrial carrier protein 1 isoform X2
translation: MEIAEEKRGVQGQSIDVRFKEIKYKGMFHALFRIWKEEGLLALYSGIAPALLRQASYGTIKIGIYQSLKKLFVDRLEDETLLINMICGVVSGVISSTLANPTDVLKIRMQAQGSLFQGGMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIMSGLMGDTILAHFVSSFTCGLAGAVASNPVDVVRTRMMNQRAIVGSVELYSGTLDGLLKTWKSEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLPF
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5298430..5298456,5302680..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5310917)
location: region:5298430-5310917:1
so has part: feature:5298430-5298456:1:exon
so has part: feature:5302680-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5310917:1:exon

XP_038603896.1
type: Protein
SIO_000068: ncbiprotein

position:5298430:1
position: 5298430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5298430-5298456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302680-5302789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5310876-5310917:1:exon

SLC25A14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC25A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain mitochondrial carrier protein 1 isoform X3
translation: MFHALFRIWKEEGLLALYSGIAPALLRQASYGTIKIGIYQSLKKLFVDRLEDETLLINMICGVVSGVISSTLANPTDVLKIRMQAQGSLFQGGMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIMSGLMGDTILAHFVSSFTCGLAGAVASNPVDVVRTRMMNQRAIVGSVELYSGTLDGLLKTWKSEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLPF
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5302731..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5310917)
location: region:5302731-5310917:1
so has part: feature:5302731-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5310917:1:exon

XP_038603897.1
type: Protein
SIO_000068: ncbiprotein

position:5302731:1
position: 5302731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5302731-5302789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5310876-5310917:1:exon

SLC25A14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9261
gene: SLC25A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain mitochondrial carrier protein 1 isoform X3
translation: MFHALFRIWKEEGLLALYSGIAPALLRQASYGTIKIGIYQSLKKLFVDRLEDETLLINMICGVVSGVISSTLANPTDVLKIRMQAQGSLFQGGMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIMSGLMGDTILAHFVSSFTCGLAGAVASNPVDVVRTRMMNQRAIVGSVELYSGTLDGLLKTWKSEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLPF
SIO_010081: SLC25A14
subclass of: SO_0000673
so part of: SLC25A14
location: join(5302731..5302789,5302972..5303066,5304631..5304716,5305650..5305745,5306193..5306317,5306738..5306873,5309020..5309100,5310876..5310917)
location: region:5302731-5310917:1
so has part: feature:5302731-5302789:1:exon
so has part: feature:5302972-5303066:1:exon
so has part: feature:5304631-5304716:1:exon
so has part: feature:5305650-5305745:1:exon
so has part: feature:5306193-5306317:1:exon
so has part: feature:5306738-5306873:1:exon
so has part: feature:5309020-5309100:1:exon
so has part: feature:5310876-5310917:1:exon

XP_038603898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5302731-5302789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5302972-5303066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5304631-5304716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5305650-5305745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5306193-5306317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306738-5306873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5309020-5309100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5310876-5310917:1:exon

INTU
type: Gene
subclass of: SO_0000704
RO_0002162: 9261
gene: INTU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5320953..5365761
location: region:5320953-5365761:1
so has part: feature:5320953-5365761:1:exon
subclass of: SO_0000010

119930010
type: Gene
SIO_000068: ncbigene

position:5320953:1
position: 5320953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5365761:1
position: 5365761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5320953-5365761:1:exon

INTU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9261
gene: INTU
product: inturned planar cell polarity protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038748416.1
SIO_010081: INTU
subclass of: SO_0000673
so part of: INTU
location: join(5320953..5321062,5324951..5325351,5328946..5329031,5333489..5333692,5336754..5336872,5339612..5339701,5341017..5341094,5341979..5342129,5342328..5342381,5343164..5343226,5345679..5345891,5351179..5351352,5354223..5354320,5359826..5360015,5362006..5362163,5365428..5365761)
location: region:5320953-5365761:1
so has part: feature:5320953-5321062:1:exon
so has part: feature:5324951-5325351:1:exon
so has part: feature:5328946-5329031:1:exon
so has part: feature:5333489-5333692:1:exon
so has part: feature:5336754-5336872:1:exon
so has part: feature:5339612-5339701:1:exon
so has part: feature:5341017-5341094:1:exon
so has part: feature:5341979-5342129:1:exon
so has part: feature:5342328-5342381:1:exon
so has part: feature:5343164-5343226:1:exon
so has part: feature:5345679-5345891:1:exon
so has part: feature:5351179-5351352:1:exon
so has part: feature:5354223-5354320:1:exon
so has part: feature:5359826-5360015:1:exon
so has part: feature:5362006-5362163:1:exon
so has part: feature:5365428-5365761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5320953-5321062:1:exon

position:5321062:1
position: 5321062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5324951-5325351:1:exon

position:5324951:1
position: 5324951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5325351:1
position: 5325351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5328946-5329031:1:exon

position:5328946:1
position: 5328946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5329031:1
position: 5329031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5333489-5333692:1:exon

position:5333489:1
position: 5333489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5333692:1
position: 5333692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5336754-5336872:1:exon

position:5336754:1
position: 5336754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5336872:1
position: 5336872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5339612-5339701:1:exon

position:5339612:1
position: 5339612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5339701:1
position: 5339701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5341017-5341094:1:exon

position:5341017:1
position: 5341017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5341094:1
position: 5341094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5341979-5342129:1:exon

position:5341979:1
position: 5341979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342129:1
position: 5342129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5342328-5342381:1:exon

position:5342328:1
position: 5342328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342381:1
position: 5342381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5343164-5343226:1:exon

position:5343164:1
position: 5343164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343226:1
position: 5343226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5345679-5345891:1:exon

position:5345679:1
position: 5345679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5345891:1
position: 5345891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5351179-5351352:1:exon

position:5351179:1
position: 5351179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351352:1
position: 5351352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5354223-5354320:1:exon

position:5354223:1
position: 5354223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5354320:1
position: 5354320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5359826-5360015:1:exon

position:5359826:1
position: 5359826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5360015:1
position: 5360015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5362006-5362163:1:exon