Ornithorhynchus anatinus isolate Pmale09 chromosome 20, mOrnAna1.pri.v4, whole genome shotgun sequence.
type: Entry
definition: Ornithorhynchus anatinus isolate Pmale09 chromosome 20, mOrnAna1.pri.v4, whole genome shotgun sequence.
sequence version: NC_041747.1
sequence date: 2021-03-08
sequence: sequence
division: CON
label: NC_041747.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA534073
dblink: SAMN08537700
keyword: WGS
keyword: RefSeq
source: Ornithorhynchus anatinus (platypus)
organism: Ornithorhynchus anatinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM014219.1.\nAssembly name: mOrnAna1.pri.v4\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/11/06. The original whole-genome shotgun project has the\naccession RZJT00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-DEC-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON Unzip v. 1.0.2;\n purge_haplotigs v. bit 7.10.2018;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n fillingt v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0; gEVAL\n manual curation v. 2019-12-06\nAssembly Name :: mOrnAna1.pri.v4\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.8x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Dovetail Genomics\n HiC; Arima Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ornithorhynchus anatinus Annotation\n Release 105\nAnnotation Version :: 105\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 30535534
topology: linear
so has quality: SO_0000987
location: 1..30535534
location: region:1-30535534:1
RO_0002162: 9258

NC_041747
type: RefSeq
SIO_000068: refseq

PRJNA534073
type: BioProject
SIO_000068: bioproject

SAMN08537700
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30535534:1
position: 30535534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30535534:1:source
so part of: sequence
organism: Ornithorhynchus anatinus
mol type: genomic DNA
isolate: Pmale09
chromosome: 20
sex: male
tissue type: liver; muscle

9258
type: Taxonomy
SIO_000068: taxonomy

CENPJ
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1983..23791)
location: region:1983-23791:-1
so has part: feature:1983-23791:-1:exon
subclass of: SO_0000010

100079700
type: Gene
SIO_000068: ncbigene

position:1983:-1
position: 1983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23791:-1
position: 23791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983-23791:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CENPJ
product: centromere protein J, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029048249.2
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(1983..2371,2782..2902,2994..3078,3169..3309,5193..5291,5624..5724,7592..7679,8252..8494,11781..11946,12584..12716,13597..15226,15364..15466,16300..16444,17268..17391,17889..18419,23740..23791))
location: region:1983-23791:-1
so has part: feature:23740-23791:-1:exon
so has part: feature:17889-18419:-1:exon
so has part: feature:17268-17391:-1:exon
so has part: feature:16300-16444:-1:exon
so has part: feature:15364-15466:-1:exon
so has part: feature:13597-15226:-1:exon
so has part: feature:12584-12716:-1:exon
so has part: feature:11781-11946:-1:exon
so has part: feature:8252-8494:-1:exon
so has part: feature:7592-7679:-1:exon
so has part: feature:5624-5724:-1:exon
so has part: feature:5193-5291:-1:exon
so has part: feature:3169-3309:-1:exon
so has part: feature:2994-3078:-1:exon
so has part: feature:2782-2902:-1:exon
so has part: feature:1983-2371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23740-23791:-1:exon

position:23740:-1
position: 23740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17889-18419:-1:exon

position:17889:-1
position: 17889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18419:-1
position: 18419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17268-17391:-1:exon

position:17268:-1
position: 17268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17391:-1
position: 17391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16300-16444:-1:exon

position:16300:-1
position: 16300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16444:-1
position: 16444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15364-15466:-1:exon

position:15364:-1
position: 15364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15466:-1
position: 15466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13597-15226:-1:exon

position:13597:-1
position: 13597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15226:-1
position: 15226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12584-12716:-1:exon

position:12584:-1
position: 12584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12716:-1
position: 12716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11781-11946:-1:exon

position:11781:-1
position: 11781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11946:-1
position: 11946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8252-8494:-1:exon

position:8252:-1
position: 8252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8494:-1
position: 8494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7592-7679:-1:exon

position:7592:-1
position: 7592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679:-1
position: 7679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5624-5724:-1:exon

position:5624:-1
position: 5624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5724:-1
position: 5724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5193-5291:-1:exon

position:5193:-1
position: 5193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5291:-1
position: 5291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3169-3309:-1:exon

position:3169:-1
position: 3169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3309:-1
position: 3309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2994-3078:-1:exon

position:2994:-1
position: 2994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078:-1
position: 3078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2782-2902:-1:exon

position:2782:-1
position: 2782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902:-1
position: 2902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1983-2371:-1:exon

position:2371:-1
position: 2371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J isoform X1
translation: MPTSSDLNCWSSLGARWMTSPSRAGVILNGDLSNLERDGENHAIRSLSSHFPVKATPFSDSWSYMSEDSLYEEHILAPSNPDRIQLIATETCAGFPSAKTEQMVTCEEVPDQREESMNDSVSDSMGEFKETAYKDPLFQKLEQLKEIQQKKQEQLKRQQLKQLQRLMEEQEKLLTMVSGQKALSEGCIVPCWEKTTEQLQEGRETDVLDSKREDSSGSYTGNKFWDGTNFEERPIKAAIKERKQTFEEFLEEQIRIEDEELKQKQLQEVQGSTIAKTIPKRPFLKRGEGLARFTNAKCKFWSHRVNEAMTQSTLEHQAIGRVEKQQIQRKTSLINKEHITENSAPVKKCLQVARLKNGSGLLTQKARVLRTISGKIQSNSTTTVPPEKKPKGQFRDQSKVENSSHLEHNKENKLECSQPVEVGCQVKNKAHSLENPSPPSNSLSVSNSPTCRLGRGSEFSQELSFQKKWENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQNACRRMSSTPVKSAQRQKTNAEESSPNNPDKKSDHHLLQEDKSLSEMPRSCCESRASSLTQRKEASKASRNAFQGSLAAEEPIEWQVRDEEEEEGKKGNSYDVRPDPCELDVTVKTTGAGADKFCVSREGDPENRGCKEPFRDTKKEGKSRDVDLDLSDKDSSSGESSMGESIDNEALASPRRMLCLNRNEMEFDDDRTWTDLEDADCDLGTPGCGLPQADYSNKSEISPPDKAIRRKVAPIRKDEEFCKSSTIESDTESPSASNLMMKLFPSLKPKKKPGSSPGRESKSDTEQERRGDSVQSRVLREKVVELETEIERFKAENACLARLRQERETGLEKLRKEIADFEKQKAKELVRFEDFKKEEMRKLQRERKVFEKYATAARAIPDKKERDEIQALKQQITELQEDLKRKEAKWSSTHGRLRNQIETLARENSELREEIKVIERFRVEAWKKAEAVETHLKTEQSTVPAKKGECGNSSIGSQKCQNPSSVTQYKKPGEGHLAVQEKLCRRCRSLPTDDQSNSDKRLANVGESSKILMENSCPSRIFESPSCLPPESKEEEIQEEISHPDGKVEKVLKNGCHVILFPNGTHKEVSSDGKTVTITFFNGDVKRILPDQRVVYYYAVAQTTHTTYPEGLEVLHFSNGQIEKHYPDGRKEITFPDQTIKTLFVDGREESIFPDGTIVRVQRDGSKIIEFSNGQTELHTDKFKRREYPDGTVKTVYSNGHQETKYVSGRVRIKDKDGNVLMDTKL
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(2179..2371,2782..2902,2994..3078,3169..3309,5193..5291,5624..5724,7592..7679,8252..8494,11781..11946,12584..12716,13597..15226,15364..15466,16300..16444,17268..17391,17889..18317))
location: region:2179-18317:-1
so has part: feature:17889-18317:-1:exon
so has part: feature:17268-17391:-1:exon
so has part: feature:16300-16444:-1:exon
so has part: feature:15364-15466:-1:exon
so has part: feature:13597-15226:-1:exon
so has part: feature:12584-12716:-1:exon
so has part: feature:11781-11946:-1:exon
so has part: feature:8252-8494:-1:exon
so has part: feature:7592-7679:-1:exon
so has part: feature:5624-5724:-1:exon
so has part: feature:5193-5291:-1:exon
so has part: feature:3169-3309:-1:exon
so has part: feature:2994-3078:-1:exon
so has part: feature:2782-2902:-1:exon
so has part: feature:2179-2371:-1:exon

XP_028904082.1
type: Protein
SIO_000068: ncbiprotein

position:2179:-1
position: 2179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18317:-1
position: 18317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17889-18317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17268-17391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16300-16444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15364-15466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13597-15226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12584-12716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11781-11946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8252-8494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7592-7679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5624-5724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5193-5291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3169-3309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2994-3078:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2782-2902:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2179-2371:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CENPJ
product: centromere protein J, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029048250.2
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(3184..3309,5185..5291,5624..5724,7592..7679,8252..8494,11781..11946,12584..12716,13597..15226,15364..15466,16300..16444,17268..17391,17889..18939))
location: region:3184-18939:-1
so has part: feature:17889-18939:-1:exon
so has part: feature:17268-17391:-1:exon
so has part: feature:16300-16444:-1:exon
so has part: feature:15364-15466:-1:exon
so has part: feature:13597-15226:-1:exon
so has part: feature:12584-12716:-1:exon
so has part: feature:11781-11946:-1:exon
so has part: feature:8252-8494:-1:exon
so has part: feature:7592-7679:-1:exon
so has part: feature:5624-5724:-1:exon
so has part: feature:5185-5291:-1:exon
so has part: feature:3184-3309:-1:exon

position:3184:-1
position: 3184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18939:-1
position: 18939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17889-18939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17268-17391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16300-16444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15364-15466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13597-15226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12584-12716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11781-11946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8252-8494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7592-7679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5624-5724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5185-5291:-1:exon

position:5185:-1
position: 5185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3184-3309:-1:exon

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J isoform X2
translation: MPTSSDLNCWSSLGARWMTSPSRAGVILNGDLSNLERDGENHAIRSLSSHFPVKATPFSDSWSYMSEDSLYEEHILAPSNPDRIQLIATETCAGFPSAKTEQMVTCEEVPDQREESMNDSVSDSMGEFKETAYKDPLFQKLEQLKEIQQKKQEQLKRQQLKQLQRLMEEQEKLLTMVSGQKALSEGCIVPCWEKTTEQLQEGRETDVLDSKREDSSGSYTGNKFWDGTNFEERPIKAAIKERKQTFEEFLEEQIRIEDEELKQKQLQEVQGSTIAKTIPKRPFLKRGEGLARFTNAKCKFWSHRVNEAMTQSTLEHQAIGRVEKQQIQRKTSLINKEHITENSAPVKKCLQVARLKNGSGLLTQKARVLRTISGKIQSNSTTTVPPEKKPKGQFRDQSKVENSSHLEHNKENKLECSQPVEVGCQVKNKAHSLENPSPPSNSLSVSNSPTCRLGRGSEFSQELSFQKKWENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQNACRRMSSTPVKSAQRQKTNAEESSPNNPDKKSDHHLLQEDKSLSEMPRSCCESRASSLTQRKEASKASRNAFQGSLAAEEPIEWQVRDEEEEEGKKGNSYDVRPDPCELDVTVKTTGAGADKFCVSREGDPENRGCKEPFRDTKKEGKSRDVDLDLSDKDSSSGESSMGESIDNEALASPRRMLCLNRNEMEFDDDRTWTDLEDADCDLGTPGCGLPQADYSNKSEISPPDKAIRRKVAPIRKDEEFCKSSTIESDTESPSASNLMMKLFPSLKPKKKPGSSPGRESKSDTEQERRGDSVQSRVLREKVVELETEIERFKAENACLARLRQERETGLEKLRKEIADFEKQKAKELVRFEDFKKEEMRKLQRERKVFEKYATAARAIPDKKERDEIQALKQQITELQEDLKRKEAKWSSTHGRLRNQIETLARENSELREEIKVIERFRVEAWKKAEAVETHLKTEQSTVPAKKGECGNSSIGSQKCQNPSSVTQYKKPGEGHLAVQEKLCRRCRSLPTDDQSNSDKRLANVGESSKILMENSCPSRIFESPSCLPPESKEEEIQEEISHPDGKVRW
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(3306..3309,5185..5291,5624..5724,7592..7679,8252..8494,11781..11946,12584..12716,13597..15226,15364..15466,16300..16444,17268..17391,17889..18317))
location: region:3306-18317:-1
so has part: feature:17889-18317:-1:exon
so has part: feature:17268-17391:-1:exon
so has part: feature:16300-16444:-1:exon
so has part: feature:15364-15466:-1:exon
so has part: feature:13597-15226:-1:exon
so has part: feature:12584-12716:-1:exon
so has part: feature:11781-11946:-1:exon
so has part: feature:8252-8494:-1:exon
so has part: feature:7592-7679:-1:exon
so has part: feature:5624-5724:-1:exon
so has part: feature:5185-5291:-1:exon
so has part: feature:3306-3309:-1:exon

XP_028904083.1
type: Protein
SIO_000068: ncbiprotein

position:3306:-1
position: 3306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17889-18317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17268-17391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16300-16444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15364-15466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13597-15226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12584-12716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11781-11946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8252-8494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7592-7679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5624-5724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5185-5291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3306-3309:-1:exon

MPHOSPH8
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25793..45192
location: region:25793-45192:1
so has part: feature:25793-45192:1:exon
subclass of: SO_0000010

100089378
type: Gene
SIO_000068: ncbigene

position:25793:1
position: 25793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45192:1
position: 45192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25793-45192:1:exon

MPHOSPH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MPHOSPH8
product: M-phase phosphoprotein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_029047821.2
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(25793..25987,29551..29703,33245..34078,36040..36133,37472..37729,38867..38992,39080..39168,39514..39654,41465..41551,42037..42191,42380..42534,42924..43051,43450..43533,44576..45192)
location: region:25793-45192:1
so has part: feature:25793-25987:1:exon
so has part: feature:29551-29703:1:exon
so has part: feature:33245-34078:1:exon
so has part: feature:36040-36133:1:exon
so has part: feature:37472-37729:1:exon
so has part: feature:38867-38992:1:exon
so has part: feature:39080-39168:1:exon
so has part: feature:39514-39654:1:exon
so has part: feature:41465-41551:1:exon
so has part: feature:42037-42191:1:exon
so has part: feature:42380-42534:1:exon
so has part: feature:42924-43051:1:exon
so has part: feature:43450-43533:1:exon
so has part: feature:44576-45192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25793-25987:1:exon

position:25987:1
position: 25987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29551-29703:1:exon

position:29551:1
position: 29551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29703:1
position: 29703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33245-34078:1:exon

position:33245:1
position: 33245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34078:1
position: 34078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36040-36133:1:exon

position:36040:1
position: 36040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36133:1
position: 36133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37472-37729:1:exon

position:37472:1
position: 37472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37729:1
position: 37729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38867-38992:1:exon

position:38867:1
position: 38867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38992:1
position: 38992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39080-39168:1:exon

position:39080:1
position: 39080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39168:1
position: 39168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39514-39654:1:exon

position:39514:1
position: 39514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39654:1
position: 39654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:41465-41551:1:exon

position:41465:1
position: 41465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41551:1
position: 41551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42037-42191:1:exon

position:42037:1
position: 42037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42191:1
position: 42191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42380-42534:1:exon

position:42380:1
position: 42380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42534:1
position: 42534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42924-43051:1:exon

position:42924:1
position: 42924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43051:1
position: 43051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:43450-43533:1:exon

position:43450:1
position: 43450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43533:1
position: 43533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:44576-45192:1:exon

position:44576:1
position: 44576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPHOSPH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase phosphoprotein 8
translation: MAAAGGSGSGSGAAGGCQVTVTEADPGVPEADEPVRAAESDEDEEDVFEVEKILDVKSEAGKILYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKIVDNKAKPVKKDIQKLSLSEDVFEADSDSDWQSETKDDTSPKKKKKKSRHREDKSPDDLKKKKLKSGKLKEKPKMELDSSSESLILDAKPKKRILETKEDLKDSKKPKKEDLKELKKVKKTEIKDTKTKAKEDCKENKKIKKEKLGDSQVEADCSSLVDDFSPLLTDDDQEDLHSDGREEKQKVPVGKDKLEQDVVEDATSDPQLEGTPSAEEGAKRKKKKLRKAEENKEESRRIENKDLCVERKSIHKKQKGQAKVSPGVDKLLSGFGHIPKSLKPGTEERSRRSTDQLGEEKEVKKTEAKFSKKHDSEKEEKNRKEQKGLKTLKEIRSAFDLFKLTPEDKNDNSEGNRKREDTSLECKCAEDYKTKENKELYKERRSLRDETDTWAYIAAEGDQEILESMCQMDDHSDGRQQILSLGMDLQLEWMKMEDFQKHLNGEDENVAAADAIPSSLLRDAVKNGDYITVKIALNSNEDYNLDQEDSSGMTLVMLAAAGGQDDLLRLLIKKGAKVNSRQRNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLMIECGADCNILSKHQNSALHFAKQCNNVLVYDLLKNHLEKLSRVAEDTIRDYFEARLAILEPVFPIACHRLCEGPDFSTEFNYKPPQNMAEGSGILLFVFHANFFGKEVIARLCGPCSVQAVVLNDKFQLPIFLDSHFVYSFSPVPGLNKLFIRLKEAPSAKVKLLISAYRVQLQ
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(25808..25987,29551..29703,33245..34078,36040..36133,37472..37729,38867..38992,39080..39168,39514..39654,41465..41551,42037..42191,42380..42534,42924..43051,43450..43533,44576..44617)
location: region:25808-44617:1
so has part: feature:25808-25987:1:exon
so has part: feature:29551-29703:1:exon
so has part: feature:33245-34078:1:exon
so has part: feature:36040-36133:1:exon
so has part: feature:37472-37729:1:exon
so has part: feature:38867-38992:1:exon
so has part: feature:39080-39168:1:exon
so has part: feature:39514-39654:1:exon
so has part: feature:41465-41551:1:exon
so has part: feature:42037-42191:1:exon
so has part: feature:42380-42534:1:exon
so has part: feature:42924-43051:1:exon
so has part: feature:43450-43533:1:exon
so has part: feature:44576-44617:1:exon

XP_028903654.1
type: Protein
SIO_000068: ncbiprotein

position:25808:1
position: 25808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44617:1
position: 44617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25808-25987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29551-29703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33245-34078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36040-36133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37472-37729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38867-38992:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39080-39168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39514-39654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41465-41551:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42037-42191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42380-42534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42924-43051:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43450-43533:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44576-44617:1:exon

PSPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36385..113823)
location: region:36385-113823:-1
so has part: feature:36385-113823:-1:exon
subclass of: SO_0000010

100089394
type: Gene
SIO_000068: ncbigene

position:36385:-1
position: 36385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113823:-1
position: 113823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36385-113823:-1:exon

PSPC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9258
gene: PSPC1
product: paraspeckle component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003753843.2
SIO_010081: PSPC1
so part of: PSPC1
location: complement(join(36385..37271,46150..46277,47587..47694,48324..48398,49449..49534,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113820))
location: region:36385-113820:-1
so has part: feature:113241-113820:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:49449-49534:-1:exon
so has part: feature:48324-48398:-1:exon
so has part: feature:47587-47694:-1:exon
so has part: feature:46150-46277:-1:exon
so has part: feature:36385-37271:-1:exon

position:113820:-1
position: 113820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113820:-1:exon

position:113241:-1
position: 113241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

position:108232:-1
position: 108232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108533:-1
position: 108533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

position:103275:-1
position: 103275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103370:-1
position: 103370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

position:101987:-1
position: 101987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102183:-1
position: 102183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

position:98234:-1
position: 98234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98318:-1
position: 98318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

position:95130:-1
position: 95130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95235:-1
position: 95235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49449-49534:-1:exon

position:49449:-1
position: 49449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49534:-1
position: 49534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48324-48398:-1:exon

position:48324:-1
position: 48324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48398:-1
position: 48398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:47587-47694:-1:exon

position:47587:-1
position: 47587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47694:-1
position: 47694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46150-46277:-1:exon

position:46150:-1
position: 46150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46277:-1
position: 46277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:36385-37271:-1:exon

position:37271:-1
position: 37271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9258
gene: PSPC1
product: paraspeckle component 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003753844.2
SIO_010081: PSPC1
so part of: PSPC1
location: complement(join(47512..47694,48324..48398,49449..49534,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113820))
location: region:47512-113820:-1
so has part: feature:113241-113820:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:49449-49534:-1:exon
so has part: feature:48324-48398:-1:exon
so has part: feature:47512-47694:-1:exon

position:47512:-1
position: 47512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49449-49534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48324-48398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47512-47694:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PSPC1
product: paraspeckle component 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029047823.2
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(64158..64517,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113820))
location: region:64158-113820:-1
so has part: feature:113241-113820:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:64158-64517:-1:exon

position:64158:-1
position: 64158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64158-64517:-1:exon

position:64517:-1
position: 64517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X2
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAGDGESTTTTAAAAAAAMALALTAEPAPPPAPAPAPEDRPVEEEGEAAAVAAGAGPGAAAAAAAGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENGSLLS
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(64500..64517,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113705))
location: region:64500-113705:-1
so has part: feature:113241-113705:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:64500-64517:-1:exon

XP_028903656.1
type: Protein
SIO_000068: ncbiprotein

position:64500:-1
position: 64500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113705:-1
position: 113705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64500-64517:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PSPC1
product: paraspeckle component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_029047822.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(69973..70761,72763..72932,77425..77482,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113823))
location: region:69973-113823:-1
so has part: feature:113241-113823:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:77425-77482:-1:exon
so has part: feature:72763-72932:-1:exon
so has part: feature:69973-70761:-1:exon

position:69973:-1
position: 69973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77425-77482:-1:exon

position:77425:-1
position: 77425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77482:-1
position: 77482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:72763-72932:-1:exon

position:72763:-1
position: 72763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72932:-1
position: 72932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69973-70761:-1:exon

position:70761:-1
position: 70761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X1
translation: MLRGNLKQVRIEKNPARLRALEAAAAAAAGDGESTTTTAAAAAAAMALALTAEPAPPPAPAPAPEDRPVEEEGEAAAVAAGAGPGAAAAAAAGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEEMRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPLGPGPAMGPDGAANLGTPMMPDNGAVHNDRFPQGPPTQMGSPMGSRTGTETPQPPMSGVGPVSGGPGGFGRGNQGGNFEGPNKRRRY
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(70576..70761,72763..72932,77425..77482,95130..95235,98234..98318,101987..102183,103275..103370,108232..108533,113241..113705))
location: region:70576-113705:-1
so has part: feature:113241-113705:-1:exon
so has part: feature:108232-108533:-1:exon
so has part: feature:103275-103370:-1:exon
so has part: feature:101987-102183:-1:exon
so has part: feature:98234-98318:-1:exon
so has part: feature:95130-95235:-1:exon
so has part: feature:77425-77482:-1:exon
so has part: feature:72763-72932:-1:exon
so has part: feature:70576-70761:-1:exon

XP_028903655.1
type: Protein
SIO_000068: ncbiprotein

position:70576:-1
position: 70576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113241-113705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108232-108533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103275-103370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101987-102183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98234-98318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95130-95235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77425-77482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72763-72932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70576-70761:-1:exon

ZMYM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132236..222316
location: region:132236-222316:1
so has part: feature:132236-222316:1:exon
subclass of: SO_0000010

100089413
type: Gene
SIO_000068: ncbigene

position:132236:1
position: 132236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222316:1
position: 222316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132236-222316:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029048375.2
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(132236..132312,133232..133307,158447..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..222316)
location: region:132236-222316:1
so has part: feature:132236-132312:1:exon
so has part: feature:133232-133307:1:exon
so has part: feature:158447-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-222316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132236-132312:1:exon

position:132312:1
position: 132312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133232-133307:1:exon

position:133232:1
position: 133232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133307:1
position: 133307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158447-159303:1:exon

position:158447:1
position: 158447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159303:1
position: 159303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161504-161789:1:exon

position:161504:1
position: 161504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161789:1
position: 161789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171618-171783:1:exon

position:171618:1
position: 171618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171783:1
position: 171783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:175382-175594:1:exon

position:175382:1
position: 175382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175594:1
position: 175594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181979-182050:1:exon

position:181979:1
position: 181979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182050:1
position: 182050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:186132-186282:1:exon

position:186132:1
position: 186132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186282:1
position: 186282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:186809-186924:1:exon

position:186809:1
position: 186809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186924:1
position: 186924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:187869-187985:1:exon

position:187869:1
position: 187869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187985:1
position: 187985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:188737-188887:1:exon

position:188737:1
position: 188737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188887:1
position: 188887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193170-193342:1:exon

position:193170:1
position: 193170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193342:1
position: 193342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:200464-200629:1:exon

position:200464:1
position: 200464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200629:1
position: 200629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:203335-203369:1:exon

position:203335:1
position: 203335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203369:1
position: 203369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:205757-205886:1:exon

position:205757:1
position: 205757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205886:1
position: 205886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:206023-206138:1:exon

position:206023:1
position: 206023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206138:1
position: 206138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:206862-207033:1:exon

position:206862:1
position: 206862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207033:1
position: 207033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:208219-208347:1:exon

position:208219:1
position: 208219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208347:1
position: 208347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:209954-210048:1:exon

position:209954:1
position: 209954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210048:1
position: 210048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:211380-211548:1:exon

position:211380:1
position: 211380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211548:1
position: 211548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:211791-211942:1:exon

position:211791:1
position: 211791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211942:1
position: 211942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:215915-216029:1:exon

position:215915:1
position: 215915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216029:1
position: 216029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:216616-216867:1:exon

position:216616:1
position: 216616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216867:1
position: 216867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:217102-217222:1:exon

position:217102:1
position: 217102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217222:1
position: 217222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:219115-222316:1:exon

position:219115:1
position: 219115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029048377.2
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(132237..132312,133232..133307,158447..158948,159210..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..222316)
location: region:132237-222316:1
so has part: feature:132237-132312:1:exon
so has part: feature:133232-133307:1:exon
so has part: feature:158447-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-222316:1:exon

position:132237:1
position: 132237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132237-132312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133232-133307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158447-158948:1:exon

position:158948:1
position: 158948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159210-159303:1:exon

position:159210:1
position: 159210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181979-182050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193170-193342:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200464-200629:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:203335-203369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:205757-205886:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206023-206138:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:206862-207033:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:208219-208347:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:209954-210048:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:211380-211548:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:211791-211942:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:215915-216029:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:216616-216867:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:217102-217222:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:219115-222316:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039914934.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(132237..132312,133232..133307,158447..158948,159210..159303,161504..161789,171618..171783,175382..175594,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..222316)
location: region:132237-222316:1
so has part: feature:132237-132312:1:exon
so has part: feature:133232-133307:1:exon
so has part: feature:158447-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-222316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132237-132312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133232-133307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158447-158948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159210-159303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193170-193342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200464-200629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203335-203369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205757-205886:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206023-206138:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206862-207033:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:208219-208347:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:209954-210048:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:211380-211548:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:211791-211942:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:215915-216029:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:216616-216867:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:217102-217222:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:219115-222316:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039914935.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(132238..132312,133232..133307,158447..158948,159210..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,190461..190534,193170..193298)
location: region:132238-193298:1
so has part: feature:132238-132312:1:exon
so has part: feature:133232-133307:1:exon
so has part: feature:158447-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:190461-190534:1:exon
so has part: feature:193170-193298:1:exon

position:132238:1
position: 132238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193298:1
position: 193298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132238-132312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133232-133307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158447-158948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159210-159303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181979-182050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190461-190534:1:exon

position:190461:1
position: 190461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190534:1
position: 190534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:193170-193298:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVSRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPAMADQRNVTFTSTKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGQEKNASSFTERRLPETKNRANDLDFSASSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGISSVNDGQLENSDGRDMNLMITHVTSLQNANMGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQVGSHPSFLKEVRDHMQDSFLMQSEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFLSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPIPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKNKVSSTPPDPELLTMTDMMVEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTRTLGHDHLRLDELESTKSVKLKEDLLSHSTAELSRGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSSSSDSPVWYTSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(158457..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..219316)
location: region:158457-219316:1
so has part: feature:158457-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-219316:1:exon

XP_028904208.1
type: Protein
SIO_000068: ncbiprotein

position:158457:1
position: 158457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219316:1
position: 219316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158457-159303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181979-182050:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193170-193342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200464-200629:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203335-203369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205757-205886:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206023-206138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206862-207033:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208219-208347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:209954-210048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:211380-211548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:211791-211942:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:215915-216029:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216616-216867:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:217102-217222:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219115-219316:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X2
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVSRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPAMADQRNVTFTSTKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGQEKNASSFTERRLPETKNRANDLDFSASSFSRSKTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQVGSHPSFLKEVRDHMQDSFLMQSEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFLSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPIPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKNKVSSTPPDPELLTMTDMMVEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTRTLGHDHLRLDELESTKSVKLKEDLLSHSTAELSRGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSSSSDSPVWYTSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(158457..158948,159210..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..219316)
location: region:158457-219316:1
so has part: feature:158457-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-219316:1:exon

XP_028904210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158457-158948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159210-159303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181979-182050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193170-193342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200464-200629:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203335-203369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205757-205886:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206023-206138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206862-207033:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:208219-208347:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:209954-210048:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:211380-211548:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:211791-211942:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:215915-216029:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:216616-216867:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:217102-217222:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219115-219316:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X3
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVSRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPAMADQRNVTFTSTKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGQEKNASSFTERRLPETKNRANDLDFSASSFSRSKTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFLSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGASKELDGVVRDFCSEECCKKFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMATQKGPENLHYDQGCQTSRTKATGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTEDNWKTEHVPVPIPVPVYIPVPLHMYSQNIPIPTTLPIPVPVPIFLPTTLDSNEKILAAVEELKNKVSSTPPDPELLTMTDMMVEDEEKAEATDINSVIIETDVIIDAELLKNSALETQANMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVRTRTLGHDHLRLDELESTKSVKLKEDLLSHSTAELSRGLARFVNEIRRPNGESYAPDSIYYLCLGIQEYLGGSNRKDNIFIDPSYQAFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFKQWKKNPLTMESKACLRYQVSSLCGADSEDKISTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPEGSSSSSSSDSPVWYTSTSLDRATLENMLVRVLLVKDIYDRDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(158457..158948,159210..159303,161504..161789,171618..171783,175382..175594,186132..186282,186809..186924,187869..187985,188737..188887,193170..193342,200464..200629,203335..203369,205757..205886,206023..206138,206862..207033,208219..208347,209954..210048,211380..211548,211791..211942,215915..216029,216616..216867,217102..217222,219115..219316)
location: region:158457-219316:1
so has part: feature:158457-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:193170-193342:1:exon
so has part: feature:200464-200629:1:exon
so has part: feature:203335-203369:1:exon
so has part: feature:205757-205886:1:exon
so has part: feature:206023-206138:1:exon
so has part: feature:206862-207033:1:exon
so has part: feature:208219-208347:1:exon
so has part: feature:209954-210048:1:exon
so has part: feature:211380-211548:1:exon
so has part: feature:211791-211942:1:exon
so has part: feature:215915-216029:1:exon
so has part: feature:216616-216867:1:exon
so has part: feature:217102-217222:1:exon
so has part: feature:219115-219316:1:exon

XP_039770868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158457-158948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159210-159303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193170-193342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200464-200629:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203335-203369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205757-205886:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206023-206138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206862-207033:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208219-208347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:209954-210048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:211380-211548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:211791-211942:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:215915-216029:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216616-216867:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:217102-217222:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219115-219316:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X4
translation: MDTGSVGGLDLTEQTPVLLGTTAMATSLSNVGNSFGGPANSLVSRPNKFQNSSMEDDDDVVFIEPLQPPPTSAPAMADQRNVTFTSTKNEELQGNDSKMLPSSKDLSSQKGSISETIIIDDEEDIETNQGQEKNASSFTERRLPETKNRANDLDFSASSFSRSKTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDTLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSHYEDKQNPSKGILNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLMVDGQQKRFCCQSCVSDYKQVGSHPSFLKEVRDHMQDSFLMQSEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNTHKTKYAKSQSVGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFLSPSDIQLKCSYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGPWAPTEPLLPKRDRANGESGRVHEVASCSINRILQDV
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(158457..158948,159210..159303,161504..161789,171618..171783,175382..175594,181979..182050,186132..186282,186809..186924,187869..187985,188737..188887,190461..190534,193170..193211)
location: region:158457-193211:1
so has part: feature:158457-158948:1:exon
so has part: feature:159210-159303:1:exon
so has part: feature:161504-161789:1:exon
so has part: feature:171618-171783:1:exon
so has part: feature:175382-175594:1:exon
so has part: feature:181979-182050:1:exon
so has part: feature:186132-186282:1:exon
so has part: feature:186809-186924:1:exon
so has part: feature:187869-187985:1:exon
so has part: feature:188737-188887:1:exon
so has part: feature:190461-190534:1:exon
so has part: feature:193170-193211:1:exon

XP_039770869.1
type: Protein
SIO_000068: ncbiprotein

position:193211:1
position: 193211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158457-158948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159210-159303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161504-161789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171618-171783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175382-175594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181979-182050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186132-186282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186809-186924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187869-187985:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188737-188887:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190461-190534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193170-193211:1:exon

GJA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240283..248678)
location: region:240283-248678:-1
so has part: feature:240283-248678:-1:exon
subclass of: SO_0000010

100089422
type: Gene
SIO_000068: ncbigene

position:240283:-1
position: 240283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248678:-1
position: 248678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240283-248678:-1:exon

GJA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GJA3
product: gap junction protein alpha 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_007664085.3
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(join(240283..241796,245158..245656,248609..248678))
location: region:240283-248678:-1
so has part: feature:248609-248678:-1:exon
so has part: feature:245158-245656:-1:exon
so has part: feature:240283-241796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248609-248678:-1:exon

position:248609:-1
position: 248609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245158-245656:-1:exon

position:245158:-1
position: 245158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245656:-1
position: 245656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240283-241796:-1:exon

position:241796:-1
position: 241796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GJA3
product: gap junction protein alpha 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_001518776.4
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(join(240283..241796,245158..245656,248451..248536))
location: region:240283-248536:-1
so has part: feature:248451-248536:-1:exon
so has part: feature:245158-245656:-1:exon
so has part: feature:240283-241796:-1:exon

position:248536:-1
position: 248536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248451-248536:-1:exon

position:248451:-1
position: 248451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245158-245656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240283-241796:-1:exon

GJA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein
translation: MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFTCNTQQPGCENVCYDEAFPISHIRFWVLQIIFVSTPSLIYLGHVLHIVRMEEKKKEKEEELLKKTDPQAGPVGQGAPGSPREPLLGREVAGGGKERPPVRDEWGKVRIAGALLRTYVFNIVFKTLFEVGFIVGQYFLYGFELKPLYRCSRWPCPNTVDCFISRPTEKTIFIVFMLAVACVSLLLNMLEIYHLGWKKLKQGMTNRYSPDSPEAQRGLARPDQLTPFLLPSHAPPPPTVTIGFPPFYSQSSSSLRQATPSGYPGAPGPPTEFKMAGLPKERSRAASAQAFSSNQHILTAEQNWANQEAEQQTLERKSLTAPGAPSSPISTQQNPPEVGGGGEGSEAPLLLVNGGSLGGGSGGEAEAGEEWPGTTRVEIHESPLLLLDLRRLSKASKASSCRARSDDLAI
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(240400..241779)
location: region:240400-241779:-1
so has part: feature:240400-241779:-1:exon

XP_001518826.1
type: Protein
SIO_000068: ncbiprotein

position:240400:-1
position: 240400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241779:-1
position: 241779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240400-241779:-1:exon

GJA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein
translation: MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFTCNTQQPGCENVCYDEAFPISHIRFWVLQIIFVSTPSLIYLGHVLHIVRMEEKKKEKEEELLKKTDPQAGPVGQGAPGSPREPLLGREVAGGGKERPPVRDEWGKVRIAGALLRTYVFNIVFKTLFEVGFIVGQYFLYGFELKPLYRCSRWPCPNTVDCFISRPTEKTIFIVFMLAVACVSLLLNMLEIYHLGWKKLKQGMTNRYSPDSPEAQRGLARPDQLTPFLLPSHAPPPPTVTIGFPPFYSQSSSSLRQATPSGYPGAPGPPTEFKMAGLPKERSRAASAQAFSSNQHILTAEQNWANQEAEQQTLERKSLTAPGAPSSPISTQQNPPEVGGGGEGSEAPLLLVNGGSLGGGSGGEAEAGEEWPGTTRVEIHESPLLLLDLRRLSKASKASSCRARSDDLAI
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(240400..241779)
location: region:240400-241779:-1
so has part: feature:240400-241779:-1:exon

XP_007662275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240400-241779:-1:exon

GJB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259727..267175)
location: region:259727-267175:-1
so has part: feature:259727-267175:-1:exon
subclass of: SO_0000010

100089285
type: Gene
SIO_000068: ncbigene

position:259727:-1
position: 259727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267175:-1
position: 267175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259727-267175:-1:exon

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GJB2
product: gap junction protein beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_001516318.4
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(259727..262491,267089..267175))
location: region:259727-267175:-1
so has part: feature:267089-267175:-1:exon
so has part: feature:259727-262491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267089-267175:-1:exon

position:267089:-1
position: 267089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259727-262491:-1:exon

position:262491:-1
position: 262491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein
translation: MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHVFPISHIRLWALQLIFVSTPALLVAMHIAYRRHEKKRKFIKGETKSEYKDIEEIKRQKVRIEGALWWTYTSSIFFRIIFEAVFMYVFYFMYNGFSMTRVVKCNAWPCPNTVDCFVSRPTEKTVFTVFMISVSGICILLNVVELCYLLIRYCSGKSKKPV
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(261790..262470)
location: region:261790-262470:-1
so has part: feature:261790-262470:-1:exon

XP_001516368.1
type: Protein
SIO_000068: ncbiprotein

position:261790:-1
position: 261790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262470:-1
position: 262470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261790-262470:-1:exon

GJB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277090..285322)
location: region:277090-285322:-1
so has part: feature:277090-285322:-1:exon
subclass of: SO_0000010

100089296
type: Gene
SIO_000068: ncbigene

position:277090:-1
position: 277090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285322:-1
position: 285322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277090-285322:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GJB6
product: gap junction protein beta 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029047820.2
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(277090..278524,285293..285322))
location: region:277090-285322:-1
so has part: feature:285293-285322:-1:exon
so has part: feature:277090-278524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285293-285322:-1:exon

position:285293:-1
position: 285293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277090-278524:-1:exon

position:278524:-1
position: 278524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWSTLHTFIGGVNKYSTSIGKIWITVIFIFRVMILVVAAEEVWGDEQEDFVCNTQQPGCENVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYSRHEKARKFRRGEKKGEFKDIEDIKRQKVRIEGALWWTYTSSIFFRIIFEASFMYVFYFLYNGYNLPRVLKCSANPCPNVVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLMKVCFRQSKRAQNQGSHPGPPTKEAKQNELNELIAEGASNAIPGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(277714..278499)
location: region:277714-278499:-1
so has part: feature:277714-278499:-1:exon

XP_028903653.1
type: Protein
SIO_000068: ncbiprotein

position:277714:-1
position: 277714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278499:-1
position: 278499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277714-278499:-1:exon

CRYL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310457..363539)
location: region:310457-363539:-1
so has part: feature:310457-363539:-1:exon
subclass of: SO_0000010

100089465
type: Gene
SIO_000068: ncbigene

position:310457:-1
position: 310457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363539:-1
position: 363539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310457-363539:-1:exon

CRYL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CRYL1
product: crystallin lambda 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_007664086.2
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(310457..311440,312014..312120,314661..314766,325626..325820,329813..329974,353972..354098,357575..357682,363432..363539))
location: region:310457-363539:-1
so has part: feature:363432-363539:-1:exon
so has part: feature:357575-357682:-1:exon
so has part: feature:353972-354098:-1:exon
so has part: feature:329813-329974:-1:exon
so has part: feature:325626-325820:-1:exon
so has part: feature:314661-314766:-1:exon
so has part: feature:312014-312120:-1:exon
so has part: feature:310457-311440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363432-363539:-1:exon

position:363432:-1
position: 363432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357575-357682:-1:exon

position:357575:-1
position: 357575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357682:-1
position: 357682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353972-354098:-1:exon

position:353972:-1
position: 353972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354098:-1
position: 354098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329813-329974:-1:exon

position:329813:-1
position: 329813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329974:-1
position: 329974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:325626-325820:-1:exon

position:325626:-1
position: 325626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325820:-1
position: 325820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:314661-314766:-1:exon

position:314661:-1
position: 314661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314766:-1
position: 314766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312014-312120:-1:exon

position:312014:-1
position: 312014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312120:-1
position: 312120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:310457-311440:-1:exon

position:311440:-1
position: 311440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lambda-crystallin homolog
translation: MTSTEDGSVVVFGSGLIGRSWAMLFASGGFKVKLYDIGQQQITTALENIGKQMQELERSGMLKGSLSAQKQLSLISGCSDIEAAVEGAIHIQECIPENLDLKKKVFAQLDLVVDDNIIISSSSSCLLPSKMFTGLKHVKQCIVAHPVNPPYHIPLVELVPHPETAPSTVERTHALMRRIGQSPVRIAREIDGFVLNRLQYAIIGEAWRLVDEGIVSPSDLDTVMSHGLGMRYAFLGPLETMHLNSQGMLSYCEQYSEGMKRVLKTFGPVPEFSGETVQKIHQALCENTPADPEHLDARRQWRDECLMELAKLKAKRQTQ
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(311327..311440,312014..312120,314661..314766,325626..325820,329813..329974,353972..354098,357575..357682,363432..363472))
location: region:311327-363472:-1
so has part: feature:363432-363472:-1:exon
so has part: feature:357575-357682:-1:exon
so has part: feature:353972-354098:-1:exon
so has part: feature:329813-329974:-1:exon
so has part: feature:325626-325820:-1:exon
so has part: feature:314661-314766:-1:exon
so has part: feature:312014-312120:-1:exon
so has part: feature:311327-311440:-1:exon

XP_007662276.2
type: Protein
SIO_000068: ncbiprotein

position:311327:-1
position: 311327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363472:-1
position: 363472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363432-363472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357575-357682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353972-354098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329813-329974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325626-325820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314661-314766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312014-312120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311327-311440:-1:exon

IFT88
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371593..413029
location: region:371593-413029:1
so has part: feature:371593-413029:1:exon
subclass of: SO_0000010

100089475
type: Gene
SIO_000068: ncbigene

position:371593:1
position: 371593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413029:1
position: 413029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371593-413029:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IFT88
product: intraflagellar transport 88, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029048022.2
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(371593..371712,373516..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412782..413029)
location: region:371593-413029:1
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so has part: feature:373516-373612:1:exon
so has part: feature:376578-376640:1:exon
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so has part: feature:378549-378605:1:exon
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so has part: feature:409038-409098:1:exon
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urn:…
SIO_000300: 1
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position:371712:1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:373516-373612:1:exon

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position:373612:1
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urn:…
SIO_000300: 3
SIO_000628: feature:376578-376640:1:exon

position:376578:1
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reference: sequence
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position:376640:1
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urn:…
SIO_000300: 4
SIO_000628: feature:377585-377641:1:exon

position:377585:1
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reference: sequence
type: ForwardStrandPosition
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position:377641:1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:378549-378605:1:exon

position:378549:1
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reference: sequence
type: ForwardStrandPosition
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position:378605:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:379407-379467:1:exon

position:379407:1
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reference: sequence
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position:379467:1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:379944-380013:1:exon

position:379944:1
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position:380013:1
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urn:…
SIO_000300: 8
SIO_000628: feature:380341-380431:1:exon

position:380341:1
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reference: sequence
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position:380431:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:381390-381494:1:exon

position:381390:1
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reference: sequence
type: ForwardStrandPosition
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position:381494:1
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urn:…
SIO_000300: 10
SIO_000628: feature:382845-382947:1:exon

position:382845:1
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reference: sequence
type: ForwardStrandPosition
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position:382947:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:383889-384003:1:exon

position:383889:1
position: 383889
reference: sequence
type: ForwardStrandPosition
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position:384003:1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:384691-384922:1:exon

position:384691:1
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reference: sequence
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position:384922:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:386623-386693:1:exon

position:386623:1
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reference: sequence
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position:386693:1
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urn:…
SIO_000300: 14
SIO_000628: feature:387633-387719:1:exon

position:387633:1
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position:387719:1
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urn:…
SIO_000300: 15
SIO_000628: feature:391937-392036:1:exon

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position:392036:1
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urn:…
SIO_000300: 16
SIO_000628: feature:392641-392649:1:exon

position:392641:1
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reference: sequence
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position:392649:1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:395017-395103:1:exon

position:395017:1
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reference: sequence
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position:395103:1
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urn:…
SIO_000300: 18
SIO_000628: feature:396063-396249:1:exon

position:396063:1
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reference: sequence
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position:396249:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:397323-397431:1:exon

position:397323:1
position: 397323
reference: sequence
type: ForwardStrandPosition
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position:397431:1
position: 397431
reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:398832-398982:1:exon

position:398832:1
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reference: sequence
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position:398982:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:400646-400761:1:exon

position:400646:1
position: 400646
reference: sequence
type: ForwardStrandPosition
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position:400761:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:402489-402541:1:exon

position:402489:1
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reference: sequence
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position:402541:1
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urn:…
SIO_000300: 23
SIO_000628: feature:403816-403881:1:exon

position:403816:1
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reference: sequence
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position:403881:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:404556-404662:1:exon

position:404556:1
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reference: sequence
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position:404662:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:409038-409098:1:exon

position:409038:1
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reference: sequence
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position:409098:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:412782-413029:1:exon

position:412782:1
position: 412782
reference: sequence
type: ForwardStrandPosition
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IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IFT88
product: intraflagellar transport 88, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029048020.2
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(371594..371712,373516..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..413029)
location: region:371594-413029:1
so has part: feature:371594-371712:1:exon
so has part: feature:373516-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:392641-392649:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-413029:1:exon

position:371594:1
position: 371594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371594-371712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373516-373612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392641-392649:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:412372-412482:1:exon

position:412372:1
position: 412372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412482:1
position: 412482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:412782-413029:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IFT88
product: intraflagellar transport 88, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_007664087.3
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373446..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..413029)
location: region:373446-413029:1
so has part: feature:373446-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:392641-392649:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
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so has part: feature:403816-403881:1:exon
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so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-413029:1:exon

position:373446:1
position: 373446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373446-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

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SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392641-392649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412372-412482:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:412782-413029:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IFT88
product: intraflagellar transport 88, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_001516370.4
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
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so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-412903:1:exon

position:373523:1
position: 373523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412903:1
position: 412903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:412372-412482:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IFT88
product: intraflagellar transport 88, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_029048023.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412782-412903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X1
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAVTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRSKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:392641-392649:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-412903:1:exon

XP_028903853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392641-392649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412372-412482:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X1
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAVTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRSKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:392641-392649:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-412903:1:exon

XP_007662277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392641-392649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412372-412482:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X3
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAVTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRSKREGSAGSDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,392641..392649,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:392641-392649:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412782-412903:1:exon

XP_028903855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392641-392649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X2
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAVTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRSKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSNKEIDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412372..412482,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412372-412482:1:exon
so has part: feature:412782-412903:1:exon

XP_001516420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:412372-412482:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412782-412903:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X4
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITAVTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSRGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMGNIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMGMAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAIKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEINKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKMKEMREQRVKSGRDSSGRSKREGSAGSDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(373523..373612,376578..376640,377585..377641,378549..378605,379407..379467,379944..380013,380341..380431,381390..381494,382845..382947,383889..384003,384691..384922,386623..386693,387633..387719,391937..392036,395017..395103,396063..396249,397323..397431,398832..398982,400646..400761,402489..402541,403816..403881,404556..404662,409038..409098,412782..412903)
location: region:373523-412903:1
so has part: feature:373523-373612:1:exon
so has part: feature:376578-376640:1:exon
so has part: feature:377585-377641:1:exon
so has part: feature:378549-378605:1:exon
so has part: feature:379407-379467:1:exon
so has part: feature:379944-380013:1:exon
so has part: feature:380341-380431:1:exon
so has part: feature:381390-381494:1:exon
so has part: feature:382845-382947:1:exon
so has part: feature:383889-384003:1:exon
so has part: feature:384691-384922:1:exon
so has part: feature:386623-386693:1:exon
so has part: feature:387633-387719:1:exon
so has part: feature:391937-392036:1:exon
so has part: feature:395017-395103:1:exon
so has part: feature:396063-396249:1:exon
so has part: feature:397323-397431:1:exon
so has part: feature:398832-398982:1:exon
so has part: feature:400646-400761:1:exon
so has part: feature:402489-402541:1:exon
so has part: feature:403816-403881:1:exon
so has part: feature:404556-404662:1:exon
so has part: feature:409038-409098:1:exon
so has part: feature:412782-412903:1:exon

XP_028903856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373523-373612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376578-376640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377585-377641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378549-378605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379407-379467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379944-380013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380341-380431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381390-381494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382845-382947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383889-384003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384691-384922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386623-386693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387633-387719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391937-392036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395017-395103:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396063-396249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:397323-397431:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:398832-398982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:400646-400761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402489-402541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403816-403881:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:404556-404662:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:409038-409098:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:412782-412903:1:exon

LOC114805846
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(382946..414982)
location: region:382946-414982:-1
so has part: feature:382946-414982:-1:exon
subclass of: SO_0000011

114805846
type: Gene
SIO_000068: ncbigene

position:382946:-1
position: 382946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414982:-1
position: 414982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382946-414982:-1:exon

LOC114805846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805846
product: uncharacterized LOC114805846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003753895.2
SIO_010081: LOC114805846
subclass of: SO_0000673
so part of: LOC114805846
location: complement(join(382946..383814,385056..385164,386061..386100,393863..393956,396947..397117,403043..403127,414894..414982))
location: region:382946-414982:-1
so has part: feature:414894-414982:-1:exon
so has part: feature:403043-403127:-1:exon
so has part: feature:396947-397117:-1:exon
so has part: feature:393863-393956:-1:exon
so has part: feature:386061-386100:-1:exon
so has part: feature:385056-385164:-1:exon
so has part: feature:382946-383814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414894-414982:-1:exon

position:414894:-1
position: 414894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403043-403127:-1:exon

position:403043:-1
position: 403043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403127:-1
position: 403127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396947-397117:-1:exon

position:396947:-1
position: 396947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397117:-1
position: 397117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:393863-393956:-1:exon

position:393863:-1
position: 393863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393956:-1
position: 393956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386061-386100:-1:exon

position:386061:-1
position: 386061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386100:-1
position: 386100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385056-385164:-1:exon

position:385056:-1
position: 385056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385164:-1
position: 385164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382946-383814:-1:exon

position:383814:-1
position: 383814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL17D
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414700..419281
location: region:414700-419281:1
so has part: feature:414700-419281:1:exon
subclass of: SO_0000010

100089487
type: Gene
SIO_000068: ncbigene

position:414700:1
position: 414700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419281:1
position: 419281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414700-419281:1:exon

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IL17D
product: interleukin 17D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_007664090.3
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(414700..415108,415345..415646,418463..419281)
location: region:414700-419281:1
so has part: feature:414700-415108:1:exon
so has part: feature:415345-415646:1:exon
so has part: feature:418463-419281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414700-415108:1:exon

position:415108:1
position: 415108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:415345-415646:1:exon

position:415345:1
position: 415345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415646:1
position: 415646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418463-419281:1:exon

position:418463:1
position: 418463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D
translation: MRRRGSSPFSSAEAGRPRRGPGKASAAAEASSSAMHGVEVWLLALALALWLRPVPGAPGSGPRRPARARACPDRAEEQLEQLYGRLAAGLLAAFHHTLQLPPGTQPRNATCPAPAGPNGPNGPGHRLPLNLRSISPWAYRISHEPSRYPRYLPEAYCLCRGCLTGLSGEEDLRFRSTPVYVPTVVLRRTTACAGGRAVYVEDYVTVPVGCTCVPQPAKEPGSLDSSPNQPALKQLGSQRDQLTTT
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(414992..415108,415345..415646,418463..418781)
location: region:414992-418781:1
so has part: feature:414992-415108:1:exon
so has part: feature:415345-415646:1:exon
so has part: feature:418463-418781:1:exon

XP_007662280.2
type: Protein
SIO_000068: ncbiprotein

position:414992:1
position: 414992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418781:1
position: 418781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414992-415108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415345-415646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418463-418781:1:exon

EEF1AKMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420408..432447)
location: region:420408-432447:-1
so has part: feature:420408-432447:-1:exon
subclass of: SO_0000010

100089497
type: Gene
SIO_000068: ncbigene

position:420408:-1
position: 420408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432447:-1
position: 432447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420408-432447:-1:exon

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_001516388.4
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(420408..422147,422992..423272,425748..425830,428380..428546,432334..432447))
location: region:420408-432447:-1
so has part: feature:432334-432447:-1:exon
so has part: feature:428380-428546:-1:exon
so has part: feature:425748-425830:-1:exon
so has part: feature:422992-423272:-1:exon
so has part: feature:420408-422147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432334-432447:-1:exon

position:432334:-1
position: 432334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428380-428546:-1:exon

position:428380:-1
position: 428380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428546:-1
position: 428546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425748-425830:-1:exon

position:425748:-1
position: 425748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425830:-1
position: 425830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422992-423272:-1:exon

position:422992:-1
position: 422992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423272:-1
position: 423272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420408-422147:-1:exon

position:422147:-1
position: 422147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1
translation: MTDSEDDDVPQLSAYALAALQEFYTERQRQQQPGPDEDKKFTVGVIEEDWQLSQFWYSDETASRLAAEAISAAGKGGRIACVSAPSVYQKLRELSGENFSAYLLEYDRRFAIYGEEFVFYDYNNPLNLPETVTAHSFDVVIADPPYLSDECLRKTAETVKYLTRGKILLCTGAVMEEAAAKHLGVKMCHFVPRHTRNLANEFRCYANYASGLECD
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(422014..422147,422992..423272,425748..425830,428380..428529))
location: region:422014-428529:-1
so has part: feature:428380-428529:-1:exon
so has part: feature:425748-425830:-1:exon
so has part: feature:422992-423272:-1:exon
so has part: feature:422014-422147:-1:exon

XP_001516438.1
type: Protein
SIO_000068: ncbiprotein

position:422014:-1
position: 422014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428529:-1
position: 428529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428380-428529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425748-425830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422992-423272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422014-422147:-1:exon

XPO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(438114..496221)
location: region:438114-496221:-1
so has part: feature:438114-496221:-1:exon
subclass of: SO_0000010

100089522
type: Gene
SIO_000068: ncbigene

position:438114:-1
position: 438114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496221:-1
position: 496221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438114-496221:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: XPO4
product: exportin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029048028.2
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(438114..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480773,486022..486127,496113..496221))
location: region:438114-496221:-1
so has part: feature:496113-496221:-1:exon
so has part: feature:486022-486127:-1:exon
so has part: feature:480632-480773:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:438114-440675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496113-496221:-1:exon

position:496113:-1
position: 496113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486022-486127:-1:exon

position:486022:-1
position: 486022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486127:-1
position: 486127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480632-480773:-1:exon

position:480632:-1
position: 480632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480773:-1
position: 480773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:478163-478301:-1:exon

position:478163:-1
position: 478163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478301:-1
position: 478301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473406-473522:-1:exon

position:473406:-1
position: 473406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473522:-1
position: 473522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472547-472700:-1:exon

position:472547:-1
position: 472547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472700:-1
position: 472700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:467288-467400:-1:exon

position:467288:-1
position: 467288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467400:-1
position: 467400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:464029-464186:-1:exon

position:464029:-1
position: 464029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464186:-1
position: 464186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:463624-463798:-1:exon

position:463624:-1
position: 463624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463798:-1
position: 463798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:456066-456242:-1:exon

position:456066:-1
position: 456066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456242:-1
position: 456242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:455149-455291:-1:exon

position:455149:-1
position: 455149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455291:-1
position: 455291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:454507-454652:-1:exon

position:454507:-1
position: 454507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454652:-1
position: 454652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:453293-453470:-1:exon

position:453293:-1
position: 453293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453470:-1
position: 453470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:452662-452821:-1:exon

position:452662:-1
position: 452662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452821:-1
position: 452821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:450398-450567:-1:exon

position:450398:-1
position: 450398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450567:-1
position: 450567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:449278-449452:-1:exon

position:449278:-1
position: 449278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449452:-1
position: 449452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:448046-448339:-1:exon

position:448046:-1
position: 448046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448339:-1
position: 448339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:446376-446556:-1:exon

position:446376:-1
position: 446376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446556:-1
position: 446556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:445358-445476:-1:exon

position:445358:-1
position: 445358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445476:-1
position: 445476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:443343-443473:-1:exon

position:443343:-1
position: 443343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443473:-1
position: 443473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:442191-442308:-1:exon

position:442191:-1
position: 442191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442308:-1
position: 442308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:441459-441551:-1:exon

position:441459:-1
position: 441459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441551:-1
position: 441551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:438114-440675:-1:exon

position:440675:-1
position: 440675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: XPO4
product: exportin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029048030.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(438114..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480773,480883..481033,486022..486111))
location: region:438114-486111:-1
so has part: feature:486022-486111:-1:exon
so has part: feature:480883-481033:-1:exon
so has part: feature:480632-480773:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:438114-440675:-1:exon

position:486111:-1
position: 486111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486022-486111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480883-481033:-1:exon

position:480883:-1
position: 480883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481033:-1
position: 481033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480632-480773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478163-478301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473406-473522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472547-472700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467288-467400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464029-464186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463624-463798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456066-456242:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:455149-455291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454507-454652:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453293-453470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452662-452821:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450398-450567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:449278-449452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448046-448339:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446376-446556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445358-445476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:443343-443473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:442191-442308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:441459-441551:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:438114-440675:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: XPO4
product: exportin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039914892.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(438114..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480773,480883..481033,483289..483354))
location: region:438114-483354:-1
so has part: feature:483289-483354:-1:exon
so has part: feature:480883-481033:-1:exon
so has part: feature:480632-480773:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:438114-440675:-1:exon

position:483354:-1
position: 483354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483289-483354:-1:exon

position:483289:-1
position: 483289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480883-481033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480632-480773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478163-478301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473406-473522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472547-472700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467288-467400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464029-464186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463624-463798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456066-456242:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:455149-455291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454507-454652:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453293-453470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452662-452821:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450398-450567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:449278-449452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448046-448339:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446376-446556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445358-445476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:443343-443473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:442191-442308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:441459-441551:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:438114-440675:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X1
translation: MMAAALGAPEVIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFMLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAVPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSAAVDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRASEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(440478..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480773,486022..486127,496113..496181))
location: region:440478-496181:-1
so has part: feature:496113-496181:-1:exon
so has part: feature:486022-486127:-1:exon
so has part: feature:480632-480773:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:440478-440675:-1:exon

XP_028903861.1
type: Protein
SIO_000068: ncbiprotein

position:440478:-1
position: 440478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496181:-1
position: 496181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496113-496181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486022-486127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480632-480773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478163-478301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473406-473522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472547-472700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467288-467400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464029-464186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463624-463798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456066-456242:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:455149-455291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454507-454652:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453293-453470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452662-452821:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450398-450567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:449278-449452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448046-448339:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446376-446556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445358-445476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:443343-443473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:442191-442308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:441459-441551:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:440478-440675:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X2
translation: MEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFMLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAVPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSAAVDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRASEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(440478..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480726))
location: region:440478-480726:-1
so has part: feature:480632-480726:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:440478-440675:-1:exon

XP_028903863.1
type: Protein
SIO_000068: ncbiprotein

position:480726:-1
position: 480726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480632-480726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478163-478301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473406-473522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472547-472700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467288-467400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464029-464186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463624-463798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456066-456242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455149-455291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454507-454652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453293-453470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452662-452821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450398-450567:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449278-449452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448046-448339:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446376-446556:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:445358-445476:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:443343-443473:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:442191-442308:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441459-441551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:440478-440675:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X2
translation: MEAVVREWILLEKSSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRGFQEEDLRQIFMLTVEVLQEFSRRENLNAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFEASQNVTLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLSTVNGIEIEDSEAVGISSIISNLITVFPRTALTAVPNELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEDRVTRLHGQLQRHQQQLLASPGSAAVDNKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSTEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAILRASEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISLPFNTAFGTDTEGSQWVVGYLLEKVISNLAVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFARRSPPLHFLSSSVQRTLMKALVLGGFAHMDTDTKQQYWTEVLQPLQQRFLNVINQENFQQICQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGETKAMNLYEACLTLLQVYSKNSVGRQRLEVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAADRSVSAADVVLYGVNLVLPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(440478..440675,441459..441551,442191..442308,443343..443473,445358..445476,446376..446556,448046..448339,449278..449452,450398..450567,452662..452821,453293..453470,454507..454652,455149..455291,456066..456242,463624..463798,464029..464186,467288..467400,472547..472700,473406..473522,478163..478301,480632..480726))
location: region:440478-480726:-1
so has part: feature:480632-480726:-1:exon
so has part: feature:478163-478301:-1:exon
so has part: feature:473406-473522:-1:exon
so has part: feature:472547-472700:-1:exon
so has part: feature:467288-467400:-1:exon
so has part: feature:464029-464186:-1:exon
so has part: feature:463624-463798:-1:exon
so has part: feature:456066-456242:-1:exon
so has part: feature:455149-455291:-1:exon
so has part: feature:454507-454652:-1:exon
so has part: feature:453293-453470:-1:exon
so has part: feature:452662-452821:-1:exon
so has part: feature:450398-450567:-1:exon
so has part: feature:449278-449452:-1:exon
so has part: feature:448046-448339:-1:exon
so has part: feature:446376-446556:-1:exon
so has part: feature:445358-445476:-1:exon
so has part: feature:443343-443473:-1:exon
so has part: feature:442191-442308:-1:exon
so has part: feature:441459-441551:-1:exon
so has part: feature:440478-440675:-1:exon

XP_039770826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480632-480726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478163-478301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473406-473522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472547-472700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467288-467400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464029-464186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463624-463798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456066-456242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455149-455291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454507-454652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453293-453470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452662-452821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450398-450567:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449278-449452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448046-448339:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446376-446556:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:445358-445476:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:443343-443473:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:442191-442308:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441459-441551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:440478-440675:-1:exon

LATS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499685..542928)
location: region:499685-542928:-1
so has part: feature:499685-542928:-1:exon
subclass of: SO_0000010

100089531
type: Gene
SIO_000068: ncbigene

position:499685:-1
position: 499685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542928:-1
position: 542928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499685-542928:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_029047982.2
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(499685..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..517040,527005..527067,542495..542928))
location: region:499685-542928:-1
so has part: feature:542495-542928:-1:exon
so has part: feature:527005-527067:-1:exon
so has part: feature:516474-517040:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:499685-502203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542495-542928:-1:exon

position:542495:-1
position: 542495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527005-527067:-1:exon

position:527005:-1
position: 527005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527067:-1
position: 527067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516474-517040:-1:exon

position:516474:-1
position: 516474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517040:-1
position: 517040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511145-511277:-1:exon

position:511145:-1
position: 511145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511277:-1
position: 511277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507427-508952:-1:exon

position:507427:-1
position: 507427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508952:-1
position: 508952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:505012-505594:-1:exon

position:505012:-1
position: 505012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505594:-1
position: 505594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503997-504179:-1:exon

position:503997:-1
position: 503997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504179:-1
position: 504179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503403-503509:-1:exon

position:503403:-1
position: 503403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503509:-1
position: 503509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:499685-502203:-1:exon

position:502203:-1
position: 502203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029047983.2
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(499685..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..517040,524385..524432))
location: region:499685-524432:-1
so has part: feature:524385-524432:-1:exon
so has part: feature:516474-517040:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:499685-502203:-1:exon

position:524432:-1
position: 524432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524385-524432:-1:exon

position:524385:-1
position: 524385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516474-517040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511145-511277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507427-508952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505012-505594:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503997-504179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503403-503509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499685-502203:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029047981.2
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(499685..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..517040,522656..522779,524385..524417))
location: region:499685-524417:-1
so has part: feature:524385-524417:-1:exon
so has part: feature:522656-522779:-1:exon
so has part: feature:516474-517040:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:499685-502203:-1:exon

position:524417:-1
position: 524417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524385-524417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522656-522779:-1:exon

position:522656:-1
position: 522656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522779:-1
position: 522779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516474-517040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511145-511277:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507427-508952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:505012-505594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503997-504179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503403-503509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499685-502203:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQHIREGLKQPPKPAGPGVPAGSSSDPSLASKSLGGKDAARQQQQQQQQQQQQLRPTAKFGPYQKALREIRYSLLPFANESGSSAAPDVNRQMLQELVNAGCDQEMAMRALKQTGSRGIEAALEFISKMGYLDPRNEQIVRVIKQTSPGKGAVPNPVARRPSFEAANESFPPYHQLGSAVYDRGGFGVDSASLLGDGPRQYVDYLLAPPQRLPGVGPHGAAGGHPHQPKAYPASLEPPLINYPVGGHGGQPLPLPAPHGSGSTHYGRPLLVVPGETLGYGIQRSPSFQSKMPPPPLQEGGYGNLSGKGPGAPGGPGHAFQQAAGTGPGVGAGGLYGSHPHHKQTSPSAHPVHVMGGRGPAFPSDFAESPPASLLAPSRNSLNLDGYELGGAGGPPWPPSTLSRRDSLQSPGLEASPRQHVGLRADGTGPSRTNSFNGHQPASVSLRAGAPGKNDPTLSSPNTITAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWLPAQSPGAEGLDAMEPHGPPLGGPGTYPMDADFGAQELRWPPPPYPKHLRLPNNAEPLDVDGLCAGVEQSLRGVPGPAEDSCDRGSKSAKGEKAGKDKKQIQTSPVPVRKSGRDEEKRESRIKTYSPFAFKFYMEQHVENVLKTYQQKVHRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKESLYFVMDYIPGGDMMSLLIRLEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGRHARQDSMEPGGLWDDVSNCRCGDRLKTLEQRAEKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVQLSPEASDLIAKLCCAAEARLGGNGADDIKAHPFFGAMDFSGDLRRQPAPYIPKVSHPMDTSNFDPVDEEGPWDDASGDSTRAWDTLAAANSKHPEHAFYEFTFRRFFDDNGYPFRCPKPLGGEAAPSEDLDPNPRENARAVGEPAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(501697..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..516839))
location: region:501697-516839:-1
so has part: feature:516474-516839:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:501697-502203:-1:exon

XP_028903814.1
type: Protein
SIO_000068: ncbiprotein

position:501697:-1
position: 501697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516839:-1
position: 516839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516474-516839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511145-511277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507427-508952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505012-505594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503997-504179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503403-503509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501697-502203:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQHIREGLKQPPKPAGPGVPAGSSSDPSLASKSLGGKDAARQQQQQQQQQQQQLRPTAKFGPYQKALREIRYSLLPFANESGSSAAPDVNRQMLQELVNAGCDQEMAMRALKQTGSRGIEAALEFISKMGYLDPRNEQIVRVIKQTSPGKGAVPNPVARRPSFEAANESFPPYHQLGSAVYDRGGFGVDSASLLGDGPRQYVDYLLAPPQRLPGVGPHGAAGGHPHQPKAYPASLEPPLINYPVGGHGGQPLPLPAPHGSGSTHYGRPLLVVPGETLGYGIQRSPSFQSKMPPPPLQEGGYGNLSGKGPGAPGGPGHAFQQAAGTGPGVGAGGLYGSHPHHKQTSPSAHPVHVMGGRGPAFPSDFAESPPASLLAPSRNSLNLDGYELGGAGGPPWPPSTLSRRDSLQSPGLEASPRQHVGLRADGTGPSRTNSFNGHQPASVSLRAGAPGKNDPTLSSPNTITAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWLPAQSPGAEGLDAMEPHGPPLGGPGTYPMDADFGAQELRWPPPPYPKHLRLPNNAEPLDVDGLCAGVEQSLRGVPGPAEDSCDRGSKSAKGEKAGKDKKQIQTSPVPVRKSGRDEEKRESRIKTYSPFAFKFYMEQHVENVLKTYQQKVHRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKESLYFVMDYIPGGDMMSLLIRLEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGRHARQDSMEPGGLWDDVSNCRCGDRLKTLEQRAEKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVQLSPEASDLIAKLCCAAEARLGGNGADDIKAHPFFGAMDFSGDLRRQPAPYIPKVSHPMDTSNFDPVDEEGPWDDASGDSTRAWDTLAAANSKHPEHAFYEFTFRRFFDDNGYPFRCPKPLGGEAAPSEDLDPNPRENARAVGEPAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(501697..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..516839))
location: region:501697-516839:-1
so has part: feature:516474-516839:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:501697-502203:-1:exon

XP_028903815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516474-516839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511145-511277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507427-508952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505012-505594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503997-504179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503403-503509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501697-502203:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQHIREGLKQPPKPAGPGVPAGSSSDPSLASKSLGGKDAARQQQQQQQQQQQQLRPTAKFGPYQKALREIRYSLLPFANESGSSAAPDVNRQMLQELVNAGCDQEMAMRALKQTGSRGIEAALEFISKMGYLDPRNEQIVRVIKQTSPGKGAVPNPVARRPSFEAANESFPPYHQLGSAVYDRGGFGVDSASLLGDGPRQYVDYLLAPPQRLPGVGPHGAAGGHPHQPKAYPASLEPPLINYPVGGHGGQPLPLPAPHGSGSTHYGRPLLVVPGETLGYGIQRSPSFQSKMPPPPLQEGGYGNLSGKGPGAPGGPGHAFQQAAGTGPGVGAGGLYGSHPHHKQTSPSAHPVHVMGGRGPAFPSDFAESPPASLLAPSRNSLNLDGYELGGAGGPPWPPSTLSRRDSLQSPGLEASPRQHVGLRADGTGPSRTNSFNGHQPASVSLRAGAPGKNDPTLSSPNTITAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWLPAQSPGAEGLDAMEPHGPPLGGPGTYPMDADFGAQELRWPPPPYPKHLRLPNNAEPLDVDGLCAGVEQSLRGVPGPAEDSCDRGSKSAKGEKAGKDKKQIQTSPVPVRKSGRDEEKRESRIKTYSPFAFKFYMEQHVENVLKTYQQKVHRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKESLYFVMDYIPGGDMMSLLIRLEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGRHARQDSMEPGGLWDDVSNCRCGDRLKTLEQRAEKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVQLSPEASDLIAKLCCAAEARLGGNGADDIKAHPFFGAMDFSGDLRRQPAPYIPKVSHPMDTSNFDPVDEEGPWDDASGDSTRAWDTLAAANSKHPEHAFYEFTFRRFFDDNGYPFRCPKPLGGEAAPSEDLDPNPRENARAVGEPAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(501697..502203,503403..503509,503997..504179,505012..505594,507427..508952,511145..511277,516474..516839))
location: region:501697-516839:-1
so has part: feature:516474-516839:-1:exon
so has part: feature:511145-511277:-1:exon
so has part: feature:507427-508952:-1:exon
so has part: feature:505012-505594:-1:exon
so has part: feature:503997-504179:-1:exon
so has part: feature:503403-503509:-1:exon
so has part: feature:501697-502203:-1:exon

XP_028903816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516474-516839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511145-511277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507427-508952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505012-505594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503997-504179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503403-503509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501697-502203:-1:exon

SAP18
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543129..547211
location: region:543129-547211:1
so has part: feature:543129-547211:1:exon
subclass of: SO_0000010

100089305
type: Gene
SIO_000068: ncbigene

position:543129:1
position: 543129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547211:1
position: 547211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543129-547211:1:exon

SAP18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SAP18
product: Sin3A associated protein 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_007664092.3
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(543129..543285,543385..543494,545297..545419,546783..547211)
location: region:543129-547211:1
so has part: feature:543129-543285:1:exon
so has part: feature:543385-543494:1:exon
so has part: feature:545297-545419:1:exon
so has part: feature:546783-547211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543129-543285:1:exon

position:543285:1
position: 543285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543385-543494:1:exon

position:543385:1
position: 543385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543494:1
position: 543494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545297-545419:1:exon

position:545297:1
position: 545297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545419:1
position: 545419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546783-547211:1:exon

position:546783:1
position: 546783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP18
translation: MLAAAGVGGHSERLGGRRGKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(543154..543285,543385..543494,545297..545419,546783..546939)
location: region:543154-546939:1
so has part: feature:543154-543285:1:exon
so has part: feature:543385-543494:1:exon
so has part: feature:545297-545419:1:exon
so has part: feature:546783-546939:1:exon

XP_007662282.1
type: Protein
SIO_000068: ncbiprotein

position:543154:1
position: 543154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546939:1
position: 546939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543154-543285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543385-543494:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545297-545419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546783-546939:1:exon

SKA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548329..556613)
location: region:548329-556613:-1
so has part: feature:548329-556613:-1:exon
subclass of: SO_0000010

100089562
type: Gene
SIO_000068: ncbigene

position:548329:-1
position: 548329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556613:-1
position: 556613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548329-556613:-1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_007664093.3
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(548329..548586,548910..549031,549247..549450,550727..550911,551048..551178,551827..552244,552924..553089,554042..554106,556386..556613))
location: region:548329-556613:-1
so has part: feature:556386-556613:-1:exon
so has part: feature:554042-554106:-1:exon
so has part: feature:552924-553089:-1:exon
so has part: feature:551827-552244:-1:exon
so has part: feature:551048-551178:-1:exon
so has part: feature:550727-550911:-1:exon
so has part: feature:549247-549450:-1:exon
so has part: feature:548910-549031:-1:exon
so has part: feature:548329-548586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556386-556613:-1:exon

position:556386:-1
position: 556386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:554042-554106:-1:exon

position:554042:-1
position: 554042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554106:-1
position: 554106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552924-553089:-1:exon

position:552924:-1
position: 552924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553089:-1
position: 553089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551827-552244:-1:exon

position:551827:-1
position: 551827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552244:-1
position: 552244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551048-551178:-1:exon

position:551048:-1
position: 551048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551178:-1
position: 551178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550727-550911:-1:exon

position:550727:-1
position: 550727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550911:-1
position: 550911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549247-549450:-1:exon

position:549247:-1
position: 549247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549450:-1
position: 549450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548910-549031:-1:exon

position:548910:-1
position: 548910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549031:-1
position: 549031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548329-548586:-1:exon

position:548586:-1
position: 548586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_001518886.5
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(548329..548586,548910..549031,549247..549453,550727..550911,551048..551178,551827..552244,552924..553089,554042..554106,556386..556609))
location: region:548329-556609:-1
so has part: feature:556386-556609:-1:exon
so has part: feature:554042-554106:-1:exon
so has part: feature:552924-553089:-1:exon
so has part: feature:551827-552244:-1:exon
so has part: feature:551048-551178:-1:exon
so has part: feature:550727-550911:-1:exon
so has part: feature:549247-549453:-1:exon
so has part: feature:548910-549031:-1:exon
so has part: feature:548329-548586:-1:exon

position:556609:-1
position: 556609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556386-556609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554042-554106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552924-553089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551827-552244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551048-551178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550727-550911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549247-549453:-1:exon

position:549453:-1
position: 549453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548910-549031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548329-548586:-1:exon

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X2
translation: MDVIGNFYGKLRALALTLEKETAQLERALSAQETDFEEESPMRLLHDMHSEVRTLKGDVQTLLEKNHSERQGSYDFIKATKLLRQRNTVDIVKLRELFQKYGYKPPASENSGKEVAADAPGPPGTGPESEGVEDLPGSATATTTQPQGPNAPGDPARCPQLSDFGLGRYVLPSAWDRHPHAQNLYDRKTKMATPPLQTSPGRVLKTPKCALKMDDCECMTPKLEHFGISEHTMCLNNDYTMVLKKAEKTKSFSKGGPGGLASKSAATASGAEAIASSSDVPTIPGPAIQVLEENSADGAQSPLVPVFCTPGIKIPSVNIDVIASDFPKAKESGFPNCAGTPPPPDFETACLKEESEGKVTQTPSETDVWPNSVSLGNPASLALRSDSCLEQDGKSSPPPITASENLLSTPTPPEMTTIPDDILQILSRYNPNLATPVAIKATPRKDVLFTHEREIMQPGYNKENRSYY
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(548574..548586,548910..549031,549247..549450,550727..550911,551048..551178,551827..552244,552924..553089,554042..554106,556386..556488))
location: region:548574-556488:-1
so has part: feature:556386-556488:-1:exon
so has part: feature:554042-554106:-1:exon
so has part: feature:552924-553089:-1:exon
so has part: feature:551827-552244:-1:exon
so has part: feature:551048-551178:-1:exon
so has part: feature:550727-550911:-1:exon
so has part: feature:549247-549450:-1:exon
so has part: feature:548910-549031:-1:exon
so has part: feature:548574-548586:-1:exon

XP_007662283.1
type: Protein
SIO_000068: ncbiprotein

position:548574:-1
position: 548574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556488:-1
position: 556488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556386-556488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554042-554106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552924-553089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551827-552244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551048-551178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550727-550911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549247-549450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548910-549031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548574-548586:-1:exon

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X1
translation: MDVIGNFYGKLRALALTLEKETAQLERALSAQETDFEEESPMRLLHDMHSEVRTLKGDVQTLLEKNHSERQGSYDFIKATKLLRQRNTVDIVKLRELFQKYGYKPPASENSGKEVAADAPGPPGTGPESEGVEDLPGSATATTTQPQGPNAPGDPARCPQLSDFGLGRYVLPSAWDRHPHAQNLYDRKTKMATPPLQTSPGRVLKTPKCALKMDDCECMTPKLEHFGISEHTMCLNNDYTMVLKKAEKTKSFSKGGPGGLASKSAATASGAEAIASSSDVPTIPGPAIQVLEENSADGAQSPLVPVFCTPGIKIPSVNIDVIASDFPKAKESGFPNCAGTPPPPDFETACLKEESEQGKVTQTPSETDVWPNSVSLGNPASLALRSDSCLEQDGKSSPPPITASENLLSTPTPPEMTTIPDDILQILSRYNPNLATPVAIKATPRKDVLFTHEREIMQPGYNKENRSYY
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(548574..548586,548910..549031,549247..549453,550727..550911,551048..551178,551827..552244,552924..553089,554042..554106,556386..556488))
location: region:548574-556488:-1
so has part: feature:556386-556488:-1:exon
so has part: feature:554042-554106:-1:exon
so has part: feature:552924-553089:-1:exon
so has part: feature:551827-552244:-1:exon
so has part: feature:551048-551178:-1:exon
so has part: feature:550727-550911:-1:exon
so has part: feature:549247-549453:-1:exon
so has part: feature:548910-549031:-1:exon
so has part: feature:548574-548586:-1:exon

XP_001518936.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556386-556488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554042-554106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552924-553089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551827-552244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551048-551178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550727-550911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549247-549453:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548910-549031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548574-548586:-1:exon

MRPL57
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 556878..557345
location: region:556878-557345:1
so has part: feature:556878-557345:1:exon
subclass of: SO_0000010

100089571
type: Gene
SIO_000068: ncbigene

position:556878:1
position: 556878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557345:1
position: 557345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556878-557345:1:exon

MRPL57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MRPL57
product: mitochondrial ribosomal protein L57
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_001518894.4
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 556878..557345
location: region:556878-557345:1
so has part: feature:556878-557345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556878-557345:1:exon

MRPL57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein 63, mitochondrial
translation: MFLSALLLGTRIPGKQWIGKHRRPRYVNAGMKGRMVRRLEIEAENEYWLGQPYMSREQEYGHAAARKREAFEALKAARAANFPPHRFVADQLDHLNVTKKWTVS
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 556913..557227
location: region:556913-557227:1
so has part: feature:556913-557227:1:exon

XP_001518944.1
type: Protein
SIO_000068: ncbiprotein

position:556913:1
position: 556913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557227:1
position: 557227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556913-557227:1:exon

ZDHHC20
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(562117..603808)
location: region:562117-603808:-1
so has part: feature:562117-603808:-1:exon
subclass of: SO_0000010

100089581
type: Gene
SIO_000068: ncbigene

position:562117:-1
position: 562117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603808:-1
position: 603808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562117-603808:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029048136.2
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(562117..563487,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603808))
location: region:562117-603808:-1
so has part: feature:603640-603808:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:562117-563487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603808:-1:exon

position:603640:-1
position: 603640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

position:585299:-1
position: 585299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585325:-1
position: 585325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

position:581052:-1
position: 581052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581155:-1
position: 581155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

position:578214:-1
position: 578214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578334:-1
position: 578334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

position:576975:-1
position: 576975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577044:-1
position: 577044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

position:575924:-1
position: 575924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575956:-1
position: 575956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

position:575559:-1
position: 575559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575679:-1
position: 575679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

position:570899:-1
position: 570899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570934:-1
position: 570934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

position:569969:-1
position: 569969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570101:-1
position: 570101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

position:568934:-1
position: 568934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569060:-1
position: 569060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

position:567056:-1
position: 567056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567142:-1
position: 567142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:562117-563487:-1:exon

position:563487:-1
position: 563487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029048133.2
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(562117..563487,564288..564365,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603807))
location: region:562117-603807:-1
so has part: feature:603640-603807:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:564288-564365:-1:exon
so has part: feature:562117-563487:-1:exon

position:603807:-1
position: 603807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564288-564365:-1:exon

position:564288:-1
position: 564288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564365:-1
position: 564365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:562117-563487:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029048131.2
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(562117..563487,564288..564365,565678..565793,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603806))
location: region:562117-603806:-1
so has part: feature:603640-603806:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:565678-565793:-1:exon
so has part: feature:564288-564365:-1:exon
so has part: feature:562117-563487:-1:exon

position:603806:-1
position: 603806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565678-565793:-1:exon

position:565678:-1
position: 565678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565793:-1
position: 565793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:564288-564365:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562117-563487:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_029048132.2
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(562117..563487,564288..564365,565678..565793,567056..567142,568934..569060,569969..570101,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603804))
location: region:562117-603804:-1
so has part: feature:603640-603804:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:565678-565793:-1:exon
so has part: feature:564288-564365:-1:exon
so has part: feature:562117-563487:-1:exon

position:603804:-1
position: 603804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565678-565793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564288-564365:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562117-563487:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X4
translation: MAPWQVLRCCQRSLAWVPVLFIALVVAWSYYAYVVELCLFTIIFTGEKGKAVVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMDPEQVIVTSQSEPAKRFIQHICA
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(563463..563487,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603757))
location: region:563463-603757:-1
so has part: feature:603640-603757:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:563463-563487:-1:exon

XP_028903969.1
type: Protein
SIO_000068: ncbiprotein

position:563463:-1
position: 563463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603757:-1
position: 603757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563463-563487:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X3
translation: MAPWQVLRCCQRSLAWVPVLFIALVVAWSYYAYVVELCLFTIIFTGEKGKAVVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMDPEQVIVTSQSEPAKRDKEPCYSFNRKLISVY
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(564314..564365,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603757))
location: region:564314-603757:-1
so has part: feature:603640-603757:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:564314-564365:-1:exon

XP_028903966.1
type: Protein
SIO_000068: ncbiprotein

position:564314:-1
position: 564314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564314-564365:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X2
translation: MAPWQVLRCCQRSLAWVPVLFIALVVAWSYYAYVVELCLFTIIFTGEKGKAVVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSEIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(564328..564365,565678..565793,567056..567142,568934..569060,569969..570101,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603757))
location: region:564328-603757:-1
so has part: feature:603640-603757:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:565678-565793:-1:exon
so has part: feature:564328-564365:-1:exon

XP_028903965.1
type: Protein
SIO_000068: ncbiprotein

position:564328:-1
position: 564328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565678-565793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564328-564365:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X1
translation: MAPWQVLRCCQRSLAWVPVLFIALVVAWSYYAYVVELCLFTIIFTGEKGKAVVYLVVFHLSFVMFVWSYWMTIFTSPASPSKEFCLSKSDKEQYEKEERQESQHEILKRVAKDLPVYTTTASRAIRYCERCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKFFLLFLMYSLLYCLFVATTVLQYFIKFWTLCRRKSAENCPKNELPDTHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRAPTFRNGPDKNGFSLGCGKNLREVFGDEKKYWLLPVFTSLGDGCNFPTRLVMDPEQVIVTSQSEPAKSPGTNQPLPIRPLSESKNRLLSSESQWLDGGSEEEGVKSEIKNHVTVSIES
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(564328..564365,565678..565793,567056..567142,568934..569060,569969..570101,570899..570934,575559..575679,575924..575956,576975..577044,578214..578334,581052..581155,585299..585325,603640..603757))
location: region:564328-603757:-1
so has part: feature:603640-603757:-1:exon
so has part: feature:585299-585325:-1:exon
so has part: feature:581052-581155:-1:exon
so has part: feature:578214-578334:-1:exon
so has part: feature:576975-577044:-1:exon
so has part: feature:575924-575956:-1:exon
so has part: feature:575559-575679:-1:exon
so has part: feature:570899-570934:-1:exon
so has part: feature:569969-570101:-1:exon
so has part: feature:568934-569060:-1:exon
so has part: feature:567056-567142:-1:exon
so has part: feature:565678-565793:-1:exon
so has part: feature:564328-564365:-1:exon

XP_028903964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603640-603757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585299-585325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581052-581155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578214-578334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576975-577044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575924-575956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575559-575679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570899-570934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569969-570101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568934-569060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567056-567142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565678-565793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564328-564365:-1:exon

MICU2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(618931..709695)
location: region:618931-709695:-1
so has part: feature:618931-709695:-1:exon
subclass of: SO_0000010

100089599
type: Gene
SIO_000068: ncbigene

position:618931:-1
position: 618931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709695:-1
position: 709695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618931-709695:-1:exon

MICU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MICU2
product: mitochondrial calcium uptake 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_029048137.2
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(618931..620286,621406..621563,623808..623916,624449..624617,634674..634771,643825..643890,648115..648197,650673..650720,654177..654252,654344..654375,668796..668940,709481..709695))
location: region:618931-709695:-1
so has part: feature:709481-709695:-1:exon
so has part: feature:668796-668940:-1:exon
so has part: feature:654344-654375:-1:exon
so has part: feature:654177-654252:-1:exon
so has part: feature:650673-650720:-1:exon
so has part: feature:648115-648197:-1:exon
so has part: feature:643825-643890:-1:exon
so has part: feature:634674-634771:-1:exon
so has part: feature:624449-624617:-1:exon
so has part: feature:623808-623916:-1:exon
so has part: feature:621406-621563:-1:exon
so has part: feature:618931-620286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709481-709695:-1:exon

position:709481:-1
position: 709481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668796-668940:-1:exon

position:668796:-1
position: 668796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668940:-1
position: 668940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654344-654375:-1:exon

position:654344:-1
position: 654344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654375:-1
position: 654375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654177-654252:-1:exon

position:654177:-1
position: 654177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654252:-1
position: 654252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650673-650720:-1:exon

position:650673:-1
position: 650673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650720:-1
position: 650720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:648115-648197:-1:exon

position:648115:-1
position: 648115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648197:-1
position: 648197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643825-643890:-1:exon

position:643825:-1
position: 643825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643890:-1
position: 643890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:634674-634771:-1:exon

position:634674:-1
position: 634674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634771:-1
position: 634771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:624449-624617:-1:exon

position:624449:-1
position: 624449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624617:-1
position: 624617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:623808-623916:-1:exon

position:623808:-1
position: 623808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623916:-1
position: 623916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:621406-621563:-1:exon

position:621406:-1
position: 621406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621563:-1
position: 621563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:618931-620286:-1:exon

position:620286:-1
position: 620286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial
translation: MAAAGAARGAVMAAAAARRGWWRRGLWTSRRALAALALLGGGTAWYRGRAPPRRELRGPAAFLTVLAQKDAPKEELSDKVSIRKQRFLQFSSQEYEGEYYMTPRDFLFSVMFDQIDRKALVRRLSQKEVEDALAFAKRARRGSSFFRDLGDKGLISYTEYLFLLTILTKPQTGFHMAFKMLDSDGDECVDKREFFKLQKIIRRQEDLKAAARDETMLTESKVEDSKVNTTLQIHFFGAKGKDKLHYKEFRRFMENLQTEVQEMEFIQFSKGLSFMRKEDFAEWLLFFTTGNKDIYWQNVKERMPAGESISLHEFKTFCQFTTHLEDFSITMQMFSVANRPVKLAEFKRAVKVATGHELSDNVLDTVFKIFDLDGDDCLSHGEFLGVLKNRMHRGLWVPQQPGLQEYWKCVKRESIKGVKEVWKQAGKPLL
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(620182..620286,621406..621563,623808..623916,624449..624617,634674..634771,643825..643890,648115..648197,650673..650720,654177..654252,654344..654375,668796..668940,709481..709684))
location: region:620182-709684:-1
so has part: feature:709481-709684:-1:exon
so has part: feature:668796-668940:-1:exon
so has part: feature:654344-654375:-1:exon
so has part: feature:654177-654252:-1:exon
so has part: feature:650673-650720:-1:exon
so has part: feature:648115-648197:-1:exon
so has part: feature:643825-643890:-1:exon
so has part: feature:634674-634771:-1:exon
so has part: feature:624449-624617:-1:exon
so has part: feature:623808-623916:-1:exon
so has part: feature:621406-621563:-1:exon
so has part: feature:620182-620286:-1:exon

XP_028903970.2
type: Protein
SIO_000068: ncbiprotein

position:620182:-1
position: 620182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709684:-1
position: 709684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709481-709684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668796-668940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654344-654375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654177-654252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650673-650720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:648115-648197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643825-643890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634674-634771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624449-624617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623808-623916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:621406-621563:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:620182-620286:-1:exon

FGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 737065..764913
location: region:737065-764913:1
so has part: feature:737065-764913:1:exon
subclass of: SO_0000010

100089319
type: Gene
SIO_000068: ncbigene

position:737065:1
position: 737065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764913:1
position: 764913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737065-764913:1:exon

FGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: FGF9
product: fibroblast growth factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_001516494.3
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(737065..737396,750745..750848,761997..764913)
location: region:737065-764913:1
so has part: feature:737065-737396:1:exon
so has part: feature:750745-750848:1:exon
so has part: feature:761997-764913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737065-737396:1:exon

position:737396:1
position: 737396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750745-750848:1:exon

position:750745:1
position: 750745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750848:1
position: 750848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761997-764913:1:exon

position:761997:1
position: 761997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9
translation: MAPLGEVGNYFGVQDAAPFGNVPVLPADSPVLLRDHLGQSEAGALPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNERGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPEKVPELYKDILSQS
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(737120..737396,750745..750848,761997..762242)
location: region:737120-762242:1
so has part: feature:737120-737396:1:exon
so has part: feature:750745-750848:1:exon
so has part: feature:761997-762242:1:exon

XP_001516544.2
type: Protein
SIO_000068: ncbiprotein

position:737120:1
position: 737120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762242:1
position: 762242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737120-737396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750745-750848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761997-762242:1:exon

LOC103169102
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC103169102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857596..860354)
location: region:857596-860354:-1
so has part: feature:857596-860354:-1:exon
subclass of: SO_0000011

103169102
type: Gene
SIO_000068: ncbigene

position:857596:-1
position: 857596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860354:-1
position: 860354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857596-860354:-1:exon

LOC103169102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169102
product: uncharacterized LOC103169102, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003753998.2
SIO_010081: LOC103169102
subclass of: SO_0000673
so part of: LOC103169102
location: complement(join(857596..857808,858229..858336,859060..859132,859318..859472,859722..859827,860298..860354))
location: region:857596-860354:-1
so has part: feature:860298-860354:-1:exon
so has part: feature:859722-859827:-1:exon
so has part: feature:859318-859472:-1:exon
so has part: feature:859060-859132:-1:exon
so has part: feature:858229-858336:-1:exon
so has part: feature:857596-857808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860298-860354:-1:exon

position:860298:-1
position: 860298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859722-859827:-1:exon

position:859722:-1
position: 859722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859827:-1
position: 859827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859318-859472:-1:exon

position:859318:-1
position: 859318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859472:-1
position: 859472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859060-859132:-1:exon

position:859060:-1
position: 859060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859132:-1
position: 859132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858229-858336:-1:exon

position:858229:-1
position: 858229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858336:-1
position: 858336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:857596-857808:-1:exon

position:857808:-1
position: 857808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103169102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169102
product: uncharacterized LOC103169102, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003753997.2
SIO_010081: LOC103169102
subclass of: SO_0000673
so part of: LOC103169102
location: complement(join(857596..857808,858229..858336,859060..859132,859318..859472,859722..859827,860274..860354))
location: region:857596-860354:-1
so has part: feature:860274-860354:-1:exon
so has part: feature:859722-859827:-1:exon
so has part: feature:859318-859472:-1:exon
so has part: feature:859060-859132:-1:exon
so has part: feature:858229-858336:-1:exon
so has part: feature:857596-857808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860274-860354:-1:exon

position:860274:-1
position: 860274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859722-859827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859318-859472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859060-859132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858229-858336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857596-857808:-1:exon

LOC103169102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169102
product: uncharacterized LOC103169102, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_485624.3
SIO_010081: LOC103169102
subclass of: SO_0000673
so part of: LOC103169102
location: complement(join(857596..857808,858229..858336,859060..859132,859318..859472,859722..859827,859946..860354))
location: region:857596-860354:-1
so has part: feature:859946-860354:-1:exon
so has part: feature:859722-859827:-1:exon
so has part: feature:859318-859472:-1:exon
so has part: feature:859060-859132:-1:exon
so has part: feature:858229-858336:-1:exon
so has part: feature:857596-857808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859946-860354:-1:exon

position:859946:-1
position: 859946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859722-859827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859318-859472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859060-859132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858229-858336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857596-857808:-1:exon

LOC103169102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169102
product: uncharacterized LOC103169102, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_485625.3
SIO_010081: LOC103169102
subclass of: SO_0000673
so part of: LOC103169102
location: complement(join(857596..857808,858229..858336,858609..858764,859060..859132,859318..859472,859722..859827,859946..860354))
location: region:857596-860354:-1
so has part: feature:859946-860354:-1:exon
so has part: feature:859722-859827:-1:exon
so has part: feature:859318-859472:-1:exon
so has part: feature:859060-859132:-1:exon
so has part: feature:858609-858764:-1:exon
so has part: feature:858229-858336:-1:exon
so has part: feature:857596-857808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859946-860354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859722-859827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859318-859472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859060-859132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858609-858764:-1:exon

position:858609:-1
position: 858609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858764:-1
position: 858764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858229-858336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857596-857808:-1:exon

LOC103169102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169102
product: uncharacterized LOC103169102, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003754000.2
SIO_010081: LOC103169102
subclass of: SO_0000673
so part of: LOC103169102
location: complement(join(857596..857808,858229..858336,859006..859132,859318..859472,859722..859827,859946..860354))
location: region:857596-860354:-1
so has part: feature:859946-860354:-1:exon
so has part: feature:859722-859827:-1:exon
so has part: feature:859318-859472:-1:exon
so has part: feature:859006-859132:-1:exon
so has part: feature:858229-858336:-1:exon
so has part: feature:857596-857808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859946-860354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859722-859827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859318-859472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859006-859132:-1:exon

position:859006:-1
position: 859006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858229-858336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857596-857808:-1:exon

SGCG
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010032..1059549
location: region:1010032-1059549:1
so has part: feature:1010032-1059549:1:exon
subclass of: SO_0000010

100089943
type: Gene
SIO_000068: ncbigene

position:1010032:1
position: 1010032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059549:1
position: 1059549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010032-1059549:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SGCG
product: sarcoglycan gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_007664096.4
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1010032..1010254,1040236..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1059549)
location: region:1010032-1059549:1
so has part: feature:1010032-1010254:1:exon
so has part: feature:1040236-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1059549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010032-1010254:1:exon

position:1010254:1
position: 1010254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040236-1040433:1:exon

position:1040236:1
position: 1040236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040433:1
position: 1040433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046531-1046632:1:exon

position:1046531:1
position: 1046531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046632:1
position: 1046632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1048881-1048968:1:exon

position:1048881:1
position: 1048881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048968:1
position: 1048968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1050232-1050351:1:exon

position:1050232:1
position: 1050232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050351:1
position: 1050351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1052637-1052709:1:exon

position:1052637:1
position: 1052637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052709:1
position: 1052709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1055893-1056016:1:exon

position:1055893:1
position: 1055893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056016:1
position: 1056016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1057682-1059549:1:exon

position:1057682:1
position: 1057682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SGCG
product: sarcoglycan gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_001519169.5
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1021092..1021166,1040236..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1059549)
location: region:1021092-1059549:1
so has part: feature:1021092-1021166:1:exon
so has part: feature:1040236-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1059549:1:exon

position:1021092:1
position: 1021092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021092-1021166:1:exon

position:1021166:1
position: 1021166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040236-1040433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046531-1046632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048881-1048968:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1050232-1050351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052637-1052709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055893-1056016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1057682-1059549:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SGCG
product: sarcoglycan gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016226769.2
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1021108..1021166,1040239..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1059549)
location: region:1021108-1059549:1
so has part: feature:1021108-1021166:1:exon
so has part: feature:1040239-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1059549:1:exon

position:1021108:1
position: 1021108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021108-1021166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040239-1040433:1:exon

position:1040239:1
position: 1040239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046531-1046632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048881-1048968:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1050232-1050351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052637-1052709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055893-1056016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1057682-1059549:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPRMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSDGSVVLDAETVCLPKLVQGTTGGPGSPQRLYEICACPDGRLYLSAAGVGSTCQEYSRVCQ
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1040239..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1057855)
location: region:1040239-1057855:1
so has part: feature:1040239-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1057855:1:exon

XP_016082255.1
type: Protein
SIO_000068: ncbiprotein

position:1057855:1
position: 1057855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040239-1040433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046531-1046632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048881-1048968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050232-1050351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052637-1052709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055893-1056016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057682-1057855:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPRMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSDGSVVLDAETVCLPKLVQGTTGGPGSPQRLYEICACPDGRLYLSAAGVGSTCQEYSRVCQ
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1040239..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1057855)
location: region:1040239-1057855:1
so has part: feature:1040239-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1057855:1:exon

XP_001519219.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1040239-1040433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046531-1046632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048881-1048968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050232-1050351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052637-1052709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055893-1056016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057682-1057855:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTTQGTNLERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNFALTIWILKVMWFSPTGMGHLRVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPRMVEVHSQQFQINSQDGKPLFAVDEKEVVVGTDRLRVTGPEGALFEHSVETPLVRAEAFKELRLESPTRSLSMDAPRGVHVRAQAGNVELLSQMDIKLHSSDGSVVLDAETVCLPKLVQGTTGGPGSPQRLYEICACPDGRLYLSAAGVGSTCQEYSRVCQ
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(1040239..1040433,1046531..1046632,1048881..1048968,1050232..1050351,1052637..1052709,1055893..1056016,1057682..1057855)
location: region:1040239-1057855:1
so has part: feature:1040239-1040433:1:exon
so has part: feature:1046531-1046632:1:exon
so has part: feature:1048881-1048968:1:exon
so has part: feature:1050232-1050351:1:exon
so has part: feature:1052637-1052709:1:exon
so has part: feature:1055893-1056016:1:exon
so has part: feature:1057682-1057855:1:exon

XP_007662286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1040239-1040433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046531-1046632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048881-1048968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050232-1050351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052637-1052709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055893-1056016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1057682-1057855:1:exon

LOC114805853
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1045034..1052640)
location: region:1045034-1052640:-1
so has part: feature:1045034-1052640:-1:exon
subclass of: SO_0000011

114805853
type: Gene
SIO_000068: ncbigene

position:1045034:-1
position: 1045034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052640:-1
position: 1052640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045034-1052640:-1:exon

LOC114805853
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805853
product: uncharacterized LOC114805853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003753908.1
SIO_010081: LOC114805853
subclass of: SO_0000673
so part of: LOC114805853
location: complement(join(1045034..1046438,1050113..1050564,1052499..1052640))
location: region:1045034-1052640:-1
so has part: feature:1052499-1052640:-1:exon
so has part: feature:1050113-1050564:-1:exon
so has part: feature:1045034-1046438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052499-1052640:-1:exon

position:1052499:-1
position: 1052499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050113-1050564:-1:exon

position:1050113:-1
position: 1050113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050564:-1
position: 1050564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045034-1046438:-1:exon

position:1046438:-1
position: 1046438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SACS
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1056658..1107521)
location: region:1056658-1107521:-1
so has part: feature:1056658-1107521:-1:exon
subclass of: SO_0000010

100089946
type: Gene
SIO_000068: ncbigene

position:1056658:-1
position: 1056658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107521:-1
position: 1107521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056658-1107521:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SACS
product: sacsin molecular chaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_007664095.3
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1056658..1057299,1060060..1060159,1060557..1060609,1062567..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1104227..1104273,1104672..1104772,1107019..1107521))
location: region:1056658-1107521:-1
so has part: feature:1107019-1107521:-1:exon
so has part: feature:1104672-1104772:-1:exon
so has part: feature:1104227-1104273:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1062567-1074121:-1:exon
so has part: feature:1060557-1060609:-1:exon
so has part: feature:1060060-1060159:-1:exon
so has part: feature:1056658-1057299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107019-1107521:-1:exon

position:1107019:-1
position: 1107019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104672-1104772:-1:exon

position:1104672:-1
position: 1104672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104772:-1
position: 1104772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104227-1104273:-1:exon

position:1104227:-1
position: 1104227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104273:-1
position: 1104273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1088201-1088351:-1:exon

position:1088201:-1
position: 1088201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088351:-1
position: 1088351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1084076-1084166:-1:exon

position:1084076:-1
position: 1084076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084166:-1
position: 1084166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1082184-1082269:-1:exon

position:1082184:-1
position: 1082184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082269:-1
position: 1082269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1081527-1081638:-1:exon

position:1081527:-1
position: 1081527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081638:-1
position: 1081638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1081074-1081220:-1:exon

position:1081074:-1
position: 1081074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081220:-1
position: 1081220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1078026-1079508:-1:exon

position:1078026:-1
position: 1078026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079508:-1
position: 1079508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1077005-1077096:-1:exon

position:1077005:-1
position: 1077005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077096:-1
position: 1077096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1062567-1074121:-1:exon

position:1062567:-1
position: 1062567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074121:-1
position: 1074121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1060557-1060609:-1:exon

position:1060557:-1
position: 1060557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060609:-1
position: 1060609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1060060-1060159:-1:exon

position:1060060:-1
position: 1060060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060159:-1
position: 1060159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1056658-1057299:-1:exon

position:1057299:-1
position: 1057299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SACS
product: sacsin molecular chaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029048121.2
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1056658..1057299,1060060..1060159,1060557..1060609,1062567..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1091773..1091818))
location: region:1056658-1091818:-1
so has part: feature:1091773-1091818:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1062567-1074121:-1:exon
so has part: feature:1060557-1060609:-1:exon
so has part: feature:1060060-1060159:-1:exon
so has part: feature:1056658-1057299:-1:exon

position:1091818:-1
position: 1091818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091773-1091818:-1:exon

position:1091773:-1
position: 1091773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088201-1088351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084076-1084166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082184-1082269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081527-1081638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081074-1081220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078026-1079508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077005-1077096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1062567-1074121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060557-1060609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1060060-1060159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1056658-1057299:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X1
translation: MEAEDSNRSVRVTVLHGGLGCRTYHVPPTSAVRGVKELLHADTRVPEGEQQLWHRNRELPDWTKVGDLLNSDSCDIFLNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETKYGTETLWSKEMEQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGILDPHQALFGPQESGQCWNLKADSKEINELADQFSPFVGIFGSTKETFKKGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLHIREADGTERLVFRVTASENKGLKHERPNSIKILGTAISNYCKKVPSNSITCVTYHINIALEDESTKDAQKTSWLVCNSVGGRGICNELDCLADDLKFIPTIGIAMPLSNSEEEKGAASDFSGKAFCFLPLPPGEESQTGLPVHISGFFGLTDNRRSIKWRELDQWRDPSAVWNELLVTHVVPKVYATLILDSVKRLETERNSDFPWSVEVIYKLWPDLNKVRVHWQPILEPLFKELFQHAVLYSASKHWVKLEQAYFSELDESLESTKAVLNYLQSSGKQVVRVPANITSALQLAAGSAKPLKKVTPALVRQVLRKSGPTGSADEKIHLLEFVLSDETYSELLGLELLPLQNGSFIPFSSSVAEQDAVYITSEDYPRSLFPGLEGRLILDDLKPQVLASLKEAAQTRGRPCTQLQLLNQERFARLIKEVMNALWPGRDLVVPWYPLAEDRDHPPIAWLKMVWKNLYIHFSEDLTLFDEMPLIPKAPLEEGQTFVELIRLRIPSSVILDDESEAQLPEFLADIVQKLGGIVLKKLDASVQHPLLKKYVHSPLPSALLQIMERMSLQKLCNQVASLLPTHKDALRRFLASLTNIGEKERRLIQELTIFKKMNHSSDEGNSSFTRLKGGKVLHPTAKLPPGLRLSTLVIDSTDEATVRLVNMLKVEQLKSTSCLRLILKDIENAFYTREETTKLMLWILENLSSLKNENSSVIEWLAPLKFIPISQEKVVAAGELFDPDVEVLRDLFYAEEDKCFPPTIFTSSLDILHSLRQIGLKHEAGLKEKDIIQVAHKIEDLQGCSSPNHDALLRKAKTLLLVLNRNHSLVQLPETKATLKKSQWVPACKERPPNYPGSLVWKGDLCNLCSPPEMADVAHAILVGSSIPLVEGVHANLEKALGISTKPSIAAVLKHFKVVVDWHSSKTFSDEDYYQFQHVLLEIYGFMHDHLDEGKDAFKALQFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKIYLKSDRDLSDEESKQNLHLMLNIIRWLYSSQIPASLSTPVPVHYSKNPAKLIMKPIHECCYCDIKVDDLNDLLEDAVEPIVLVHEDIPMKTAEWLNVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECNFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHLSKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYKGTLFRLSFRTQQEAKLSEVSGTCYNTADIYSLVDEFSLCGHRLIIFTQNVNSMHLKYLKIEETNPALAQDTVIIKKTLCSSKALTAPTVSVLKEAAKLMKVGGGGSGRKIPSDPPKSACILQITVEEFHHVFRRIADLQSPLFRGPEDDPAAFFEIAKSGQAKRPADELPQKTVDSTTWLLCTCMDAGEAFKFSLNESGRRLGLVPCGAVGVLLSETQDQKWSVKSHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTVFMRHVIVKAYLEALGVLRDMAVNGELQDYTYYAVWPDPDSVHDDFSIVCQGFYEDIAHGRGKEGTKVFSDGSTWVSMKNVRFLDDCL…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1057198..1057299,1060060..1060159,1060557..1060609,1062567..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1104227..1104249))
location: region:1057198-1104249:-1
so has part: feature:1104227-1104249:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1062567-1074121:-1:exon
so has part: feature:1060557-1060609:-1:exon
so has part: feature:1060060-1060159:-1:exon
so has part: feature:1057198-1057299:-1:exon

XP_007662285.1
type: Protein
SIO_000068: ncbiprotein

position:1057198:-1
position: 1057198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104249:-1
position: 1104249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104227-1104249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088201-1088351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084076-1084166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082184-1082269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081527-1081638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081074-1081220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078026-1079508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077005-1077096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1062567-1074121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060557-1060609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1060060-1060159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057198-1057299:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X2
translation: MSVRVTVLHGGLGCRTYHVPPTSAVRGVKELLHADTRVPEGEQQLWHRNRELPDWTKVGDLLNSDSCDIFLNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETKYGTETLWSKEMEQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGILDPHQALFGPQESGQCWNLKADSKEINELADQFSPFVGIFGSTKETFKKGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLHIREADGTERLVFRVTASENKGLKHERPNSIKILGTAISNYCKKVPSNSITCVTYHINIALEDESTKDAQKTSWLVCNSVGGRGICNELDCLADDLKFIPTIGIAMPLSNSEEEKGAASDFSGKAFCFLPLPPGEESQTGLPVHISGFFGLTDNRRSIKWRELDQWRDPSAVWNELLVTHVVPKVYATLILDSVKRLETERNSDFPWSVEVIYKLWPDLNKVRVHWQPILEPLFKELFQHAVLYSASKHWVKLEQAYFSELDESLESTKAVLNYLQSSGKQVVRVPANITSALQLAAGSAKPLKKVTPALVRQVLRKSGPTGSADEKIHLLEFVLSDETYSELLGLELLPLQNGSFIPFSSSVAEQDAVYITSEDYPRSLFPGLEGRLILDDLKPQVLASLKEAAQTRGRPCTQLQLLNQERFARLIKEVMNALWPGRDLVVPWYPLAEDRDHPPIAWLKMVWKNLYIHFSEDLTLFDEMPLIPKAPLEEGQTFVELIRLRIPSSVILDDESEAQLPEFLADIVQKLGGIVLKKLDASVQHPLLKKYVHSPLPSALLQIMERMSLQKLCNQVASLLPTHKDALRRFLASLTNIGEKERRLIQELTIFKKMNHSSDEGNSSFTRLKGGKVLHPTAKLPPGLRLSTLVIDSTDEATVRLVNMLKVEQLKSTSCLRLILKDIENAFYTREETTKLMLWILENLSSLKNENSSVIEWLAPLKFIPISQEKVVAAGELFDPDVEVLRDLFYAEEDKCFPPTIFTSSLDILHSLRQIGLKHEAGLKEKDIIQVAHKIEDLQGCSSPNHDALLRKAKTLLLVLNRNHSLVQLPETKATLKKSQWVPACKERPPNYPGSLVWKGDLCNLCSPPEMADVAHAILVGSSIPLVEGVHANLEKALGISTKPSIAAVLKHFKVVVDWHSSKTFSDEDYYQFQHVLLEIYGFMHDHLDEGKDAFKALQFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKIYLKSDRDLSDEESKQNLHLMLNIIRWLYSSQIPASLSTPVPVHYSKNPAKLIMKPIHECCYCDIKVDDLNDLLEDAVEPIVLVHEDIPMKTAEWLNVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECNFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHLSKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYKGTLFRLSFRTQQEAKLSEVSGTCYNTADIYSLVDEFSLCGHRLIIFTQNVNSMHLKYLKIEETNPALAQDTVIIKKTLCSSKALTAPTVSVLKEAAKLMKVGGGGSGRKIPSDPPKSACILQITVEEFHHVFRRIADLQSPLFRGPEDDPAAFFEIAKSGQAKRPADELPQKTVDSTTWLLCTCMDAGEAFKFSLNESGRRLGLVPCGAVGVLLSETQDQKWSVKSHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTVFMRHVIVKAYLEALGVLRDMAVNGELQDYTYYAVWPDPDSVHDDFSIVCQGFYEDIAHGRGKEGTKVFSDGSTWVSMKNVRFLDDCLLQRPAIG…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1057198..1057299,1060060..1060159,1060557..1060609,1062567..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1091773..1091774))
location: region:1057198-1091774:-1
so has part: feature:1091773-1091774:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1062567-1074121:-1:exon
so has part: feature:1060557-1060609:-1:exon
so has part: feature:1060060-1060159:-1:exon
so has part: feature:1057198-1057299:-1:exon

XP_028903954.1
type: Protein
SIO_000068: ncbiprotein

position:1091774:-1
position: 1091774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091773-1091774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088201-1088351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084076-1084166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082184-1082269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081527-1081638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081074-1081220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078026-1079508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077005-1077096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1062567-1074121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060557-1060609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1060060-1060159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057198-1057299:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SACS
product: sacsin molecular chaperone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039914885.1
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1061042..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1104227..1104273,1104672..1104772,1107019..1107520))
location: region:1061042-1107520:-1
so has part: feature:1107019-1107520:-1:exon
so has part: feature:1104672-1104772:-1:exon
so has part: feature:1104227-1104273:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1061042-1074121:-1:exon

position:1061042:-1
position: 1061042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107520:-1
position: 1107520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107019-1107520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104672-1104772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104227-1104273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088201-1088351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084076-1084166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082184-1082269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081527-1081638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081074-1081220:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078026-1079508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077005-1077096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1061042-1074121:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X3
translation: MEAEDSNRSVRVTVLHGGLGCRTYHVPPTSAVRGVKELLHADTRVPEGEQQLWHRNRELPDWTKVGDLLNSDSCDIFLNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETKYGTETLWSKEMEQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGILDPHQALFGPQESGQCWNLKADSKEINELADQFSPFVGIFGSTKETFKKGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLHIREADGTERLVFRVTASENKGLKHERPNSIKILGTAISNYCKKVPSNSITCVTYHINIALEDESTKDAQKTSWLVCNSVGGRGICNELDCLADDLKFIPTIGIAMPLSNSEEEKGAASDFSGKAFCFLPLPPGEESQTGLPVHISGFFGLTDNRRSIKWRELDQWRDPSAVWNELLVTHVVPKVYATLILDSVKRLETERNSDFPWSVEVIYKLWPDLNKVRVHWQPILEPLFKELFQHAVLYSASKHWVKLEQAYFSELDESLESTKAVLNYLQSSGKQVVRVPANITSALQLAAGSAKPLKKVTPALVRQVLRKSGPTGSADEKIHLLEFVLSDETYSELLGLELLPLQNGSFIPFSSSVAEQDAVYITSEDYPRSLFPGLEGRLILDDLKPQVLASLKEAAQTRGRPCTQLQLLNQERFARLIKEVMNALWPGRDLVVPWYPLAEDRDHPPIAWLKMVWKNLYIHFSEDLTLFDEMPLIPKAPLEEGQTFVELIRLRIPSSVILDDESEAQLPEFLADIVQKLGGIVLKKLDASVQHPLLKKYVHSPLPSALLQIMERMSLQKLCNQVASLLPTHKDALRRFLASLTNIGEKERRLIQELTIFKKMNHSSDEGNSSFTRLKGGKVLHPTAKLPPGLRLSTLVIDSTDEATVRLVNMLKVEQLKSTSCLRLILKDIENAFYTREETTKLMLWILENLSSLKNENSSVIEWLAPLKFIPISQEKVVAAGELFDPDVEVLRDLFYAEEDKCFPPTIFTSSLDILHSLRQIGLKHEAGLKEKDIIQVAHKIEDLQGCSSPNHDALLRKAKTLLLVLNRNHSLVQLPETKATLKKSQWVPACKERPPNYPGSLVWKGDLCNLCSPPEMADVAHAILVGSSIPLVEGVHANLEKALGISTKPSIAAVLKHFKVVVDWHSSKTFSDEDYYQFQHVLLEIYGFMHDHLDEGKDAFKALQFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKIYLKSDRDLSDEESKQNLHLMLNIIRWLYSSQIPASLSTPVPVHYSKNPAKLIMKPIHECCYCDIKVDDLNDLLEDAVEPIVLVHEDIPMKTAEWLNVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECNFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHLSKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYKGTLFRLSFRTQQEAKLSEVSGTCYNTADIYSLVDEFSLCGHRLIIFTQNVNSMHLKYLKIEETNPALAQDTVIIKKTLCSSKALTAPTVSVLKEAAKLMKVGGGGSGRKIPSDPPKSACILQITVEEFHHVFRRIADLQSPLFRGPEDDPAAFFEIAKSGQAKRPADELPQKTVDSTTWLLCTCMDAGEAFKFSLNESGRRLGLVPCGAVGVLLSETQDQKWSVKSHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTVFMRHVIVKAYLEALGVLRDMAVNGELQDYTYYAVWPDPDSVHDDFSIVCQGFYEDIAHGRGKEGTKVFSDGSTWVSMKNVRFLDDCL…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(1062561..1074121,1077005..1077096,1078026..1079508,1081074..1081220,1081527..1081638,1082184..1082269,1084076..1084166,1088201..1088351,1104227..1104249))
location: region:1062561-1104249:-1
so has part: feature:1104227-1104249:-1:exon
so has part: feature:1088201-1088351:-1:exon
so has part: feature:1084076-1084166:-1:exon
so has part: feature:1082184-1082269:-1:exon
so has part: feature:1081527-1081638:-1:exon
so has part: feature:1081074-1081220:-1:exon
so has part: feature:1078026-1079508:-1:exon
so has part: feature:1077005-1077096:-1:exon
so has part: feature:1062561-1074121:-1:exon

XP_039770819.1
type: Protein
SIO_000068: ncbiprotein

position:1062561:-1
position: 1062561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104227-1104249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088201-1088351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084076-1084166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082184-1082269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081527-1081638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081074-1081220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078026-1079508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077005-1077096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1062561-1074121:-1:exon

TNFRSF19
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1142601..1203387
location: region:1142601-1203387:1
so has part: feature:1142601-1203387:1:exon
subclass of: SO_0000010

103169104
type: Gene
SIO_000068: ncbigene

position:1142601:1
position: 1142601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203387:1
position: 1203387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142601-1203387:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_007664097.3
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1142601..1142770,1165245..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1203387)
location: region:1142601-1203387:1
so has part: feature:1142601-1142770:1:exon
so has part: feature:1165245-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1203387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142601-1142770:1:exon

position:1142770:1
position: 1142770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1165245-1165346:1:exon

position:1165245:1
position: 1165245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165346:1
position: 1165346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1167137-1167250:1:exon

position:1167137:1
position: 1167137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167250:1
position: 1167250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174527-1174705:1:exon

position:1174527:1
position: 1174527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174705:1
position: 1174705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177151-1177236:1:exon

position:1177151:1
position: 1177151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177236:1
position: 1177236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1194484-1194648:1:exon

position:1194484:1
position: 1194484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194648:1
position: 1194648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1195122-1195247:1:exon

position:1195122:1
position: 1195122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195247:1
position: 1195247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1197824-1197926:1:exon

position:1197824:1
position: 1197824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197926:1
position: 1197926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1198795-1199197:1:exon

position:1198795:1
position: 1198795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199197:1
position: 1199197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1201001-1203387:1:exon

position:1201001:1
position: 1201001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_007664098.3
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1152048..1152109,1165245..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1203387)
location: region:1152048-1203387:1
so has part: feature:1152048-1152109:1:exon
so has part: feature:1165245-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1203387:1:exon

position:1152048:1
position: 1152048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152048-1152109:1:exon

position:1152109:1
position: 1152109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1165245-1165346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1167137-1167250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174527-1174705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177151-1177236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194484-1194648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195122-1195247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197824-1197926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198795-1199197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201001-1203387:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016226774.3
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1159484..1159616,1165245..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1203387)
location: region:1159484-1203387:1
so has part: feature:1159484-1159616:1:exon
so has part: feature:1165245-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1203387:1:exon

position:1159484:1
position: 1159484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159484-1159616:1:exon

position:1159616:1
position: 1159616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1165245-1165346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1167137-1167250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174527-1174705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177151-1177236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194484-1194648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195122-1195247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197824-1197926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198795-1199197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201001-1203387:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAKGFKKQDKILLTLLFLLAHLSWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAQCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDTALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSTRFQDVQYNGSELSCFNRPALGEFTHGACCQCQRVPVQTCRPVHLIPSLCCEETCSLDPSPHSCAFHPKSSLHERNTSSIGEMIPTFFGSISRSTCGDLSDAWPLVPTTPLDGDTLSLCDSYPGLNGDGNSLGPQRERSAHLDLSDGQDWEGAAVPAQTHSENLGEATEFSNRSVSTGQLLSQDTLSNQNQPGGESEAVVRMALPTSNQDA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1165278..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1201009)
location: region:1165278-1201009:1
so has part: feature:1165278-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1201009:1:exon

XP_016082260.1
type: Protein
SIO_000068: ncbiprotein

position:1165278:1
position: 1165278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201009:1
position: 1201009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165278-1165346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167137-1167250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174527-1174705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177151-1177236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194484-1194648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195122-1195247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197824-1197926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198795-1199197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201001-1201009:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAKGFKKQDKILLTLLFLLAHLSWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAQCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDTALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSTRFQDVQYNGSELSCFNRPALGEFTHGACCQCQRVPVQTCRPVHLIPSLCCEETCSLDPSPHSCAFHPKSSLHERNTSSIGEMIPTFFGSISRSTCGDLSDAWPLVPTTPLDGDTLSLCDSYPGLNGDGNSLGPQRERSAHLDLSDGQDWEGAAVPAQTHSENLGEATEFSNRSVSTGQLLSQDTLSNQNQPGGESEAVVRMALPTSNQDA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1165278..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1201009)
location: region:1165278-1201009:1
so has part: feature:1165278-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1201009:1:exon

XP_007662287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1165278-1165346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167137-1167250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174527-1174705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177151-1177236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194484-1194648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195122-1195247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197824-1197926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198795-1199197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201001-1201009:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MDAKGFKKQDKILLTLLFLLAHLSWRGVMSETEDCREQEFRDRSGMCILCKQCGPGMELSKECGFGYGEDAQCMACRPNRFKEDRGFQKCKPCLDCAMVNRFQKANCSVTSNAVCGDCLPGFYRKTKLGGFQDMECVPCGDPPPPYEPHCTAKVNLVKIASPASSPRDTALAAVICSALATVLLALLILCIIYCKRQFLEKKPSWSTRFQDVQYNGSELSCFNRPALGEFTHGACCQCQRVPVQTCRPVHLIPSLCCEETCSLDPSPHSCAFHPKSSLHERNTSSIGEMIPTFFGSISRSTCGDLSDAWPLVPTTPLDGDTLSLCDSYPGLNGDGNSLGPQRERSAHLDLSDGQDWEGAAVPAQTHSENLGEATEFSNRSVSTGQLLSQDTLSNQNQPGGESEAVVRMALPTSNQDA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(1165278..1165346,1167137..1167250,1174527..1174705,1177151..1177236,1194484..1194648,1195122..1195247,1197824..1197926,1198795..1199197,1201001..1201009)
location: region:1165278-1201009:1
so has part: feature:1165278-1165346:1:exon
so has part: feature:1167137-1167250:1:exon
so has part: feature:1174527-1174705:1:exon
so has part: feature:1177151-1177236:1:exon
so has part: feature:1194484-1194648:1:exon
so has part: feature:1195122-1195247:1:exon
so has part: feature:1197824-1197926:1:exon
so has part: feature:1198795-1199197:1:exon
so has part: feature:1201001-1201009:1:exon

XP_007662288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1165278-1165346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167137-1167250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174527-1174705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177151-1177236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194484-1194648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195122-1195247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197824-1197926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198795-1199197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201001-1201009:1:exon

LOC100089996
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC100089996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1208687..1288837)
location: region:1208687-1288837:-1
so has part: feature:1208687-1288837:-1:exon
subclass of: SO_0000010

100089996
type: Gene
SIO_000068: ncbigene

position:1208687:-1
position: 1208687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288837:-1
position: 1288837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208687-1288837:-1:exon

LOC100089996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100089996
product: mitochondrial intermediate peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_029048157.2
SIO_010081: LOC100089996
subclass of: SO_0000673
so part of: LOC100089996
location: complement(join(1208687..1208930,1222383..1222456,1226130..1226251,1242565..1242684,1244699..1244773,1251640..1251749,1252872..1253076,1254530..1254607,1256213..1256366,1265169..1265221,1265976..1266036,1267120..1267168,1271768..1271924,1273073..1273255,1277954..1278017,1278306..1278392,1280604..1280692,1282488..1282661,1288571..1288837))
location: region:1208687-1288837:-1
so has part: feature:1288571-1288837:-1:exon
so has part: feature:1282488-1282661:-1:exon
so has part: feature:1280604-1280692:-1:exon
so has part: feature:1278306-1278392:-1:exon
so has part: feature:1277954-1278017:-1:exon
so has part: feature:1273073-1273255:-1:exon
so has part: feature:1271768-1271924:-1:exon
so has part: feature:1267120-1267168:-1:exon
so has part: feature:1265976-1266036:-1:exon
so has part: feature:1265169-1265221:-1:exon
so has part: feature:1256213-1256366:-1:exon
so has part: feature:1254530-1254607:-1:exon
so has part: feature:1252872-1253076:-1:exon
so has part: feature:1251640-1251749:-1:exon
so has part: feature:1244699-1244773:-1:exon
so has part: feature:1242565-1242684:-1:exon
so has part: feature:1226130-1226251:-1:exon
so has part: feature:1222383-1222456:-1:exon
so has part: feature:1208687-1208930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288571-1288837:-1:exon

position:1288571:-1
position: 1288571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1282488-1282661:-1:exon

position:1282488:-1
position: 1282488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282661:-1
position: 1282661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280604-1280692:-1:exon

position:1280604:-1
position: 1280604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280692:-1
position: 1280692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1278306-1278392:-1:exon

position:1278306:-1
position: 1278306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278392:-1
position: 1278392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1277954-1278017:-1:exon

position:1277954:-1
position: 1277954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278017:-1
position: 1278017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1273073-1273255:-1:exon

position:1273073:-1
position: 1273073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273255:-1
position: 1273255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1271768-1271924:-1:exon

position:1271768:-1
position: 1271768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271924:-1
position: 1271924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1267120-1267168:-1:exon

position:1267120:-1
position: 1267120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267168:-1
position: 1267168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1265976-1266036:-1:exon

position:1265976:-1
position: 1265976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266036:-1
position: 1266036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1265169-1265221:-1:exon

position:1265169:-1
position: 1265169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265221:-1
position: 1265221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1256213-1256366:-1:exon

position:1256213:-1
position: 1256213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256366:-1
position: 1256366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1254530-1254607:-1:exon

position:1254530:-1
position: 1254530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254607:-1
position: 1254607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1252872-1253076:-1:exon

position:1252872:-1
position: 1252872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253076:-1
position: 1253076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1251640-1251749:-1:exon

position:1251640:-1
position: 1251640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251749:-1
position: 1251749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1244699-1244773:-1:exon

position:1244699:-1
position: 1244699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244773:-1
position: 1244773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1242565-1242684:-1:exon

position:1242565:-1
position: 1242565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242684:-1
position: 1242684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1226130-1226251:-1:exon

position:1226130:-1
position: 1226130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226251:-1
position: 1226251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1222383-1222456:-1:exon

position:1222383:-1
position: 1222383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222456:-1
position: 1222456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1208687-1208930:-1:exon

position:1208930:-1
position: 1208930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100089996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100089996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase
translation: MAAAWAARAAMLKVGARWGRRGRRGLWLVGPRVRPGAAAAAAAAGAAGAGARGVSTSWAPVGAAFNLRPQPPRHQAPAPRRGLFGVPELSSPEGFHVAQEQALRESDRLVAKACAVPAGAQTVQIFDQLSDALCRVADLADFVKIAHPDPAFREAADEACRSVGTMVEKLNTNVELYQSLRKLLTDDKLAASLDPETRKVAELLMLDFEISGIHLDEEKRKRAVDLNVKILDLSSAFLMGTHLPNKIPKHLLPESIRYNFEHDGDHAQVSSLHAESPDDLMREAAYKIFLHPHSGQLNCLEELLRSRDSLAQLVGYSTFAHRALQGTMAKSPETVTQFLDKLSDKLSERAVKDFEMMRGMKMKLNPQNSELMPWDHPYYSGVLRAERYNIEPSLYCPFFSLGACMEGLNLLFSRLLGISLYAEQPAKGEVWCEDVRKLAVVHETEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLSLPHSTRNSPTLLTPGMMENLFHEMGHALHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFASDYRVVTQFAKHYQTGQPLPKSMVSRLCESKKVCAAADMQLQVFYAALDQIYHGKHPLKRSTTDILKETQEKCYGLPYVPNTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKRCFVHDPFNRAMGERYRREMLAHGGGREPSLMVQGMLEKCPSVEDFVEALVSDLDPDFETYFLDSE
SIO_010081: LOC100089996
subclass of: SO_0000673
so part of: LOC100089996
location: complement(join(1208833..1208930,1222383..1222456,1226130..1226251,1242565..1242684,1244699..1244773,1251640..1251749,1252872..1253076,1254530..1254607,1256213..1256366,1265169..1265221,1265976..1266036,1267120..1267168,1271768..1271924,1273073..1273255,1277954..1278017,1278306..1278392,1280604..1280692,1282488..1282661,1288571..1288813))
location: region:1208833-1288813:-1
so has part: feature:1288571-1288813:-1:exon
so has part: feature:1282488-1282661:-1:exon
so has part: feature:1280604-1280692:-1:exon
so has part: feature:1278306-1278392:-1:exon
so has part: feature:1277954-1278017:-1:exon
so has part: feature:1273073-1273255:-1:exon
so has part: feature:1271768-1271924:-1:exon
so has part: feature:1267120-1267168:-1:exon
so has part: feature:1265976-1266036:-1:exon
so has part: feature:1265169-1265221:-1:exon
so has part: feature:1256213-1256366:-1:exon
so has part: feature:1254530-1254607:-1:exon
so has part: feature:1252872-1253076:-1:exon
so has part: feature:1251640-1251749:-1:exon
so has part: feature:1244699-1244773:-1:exon
so has part: feature:1242565-1242684:-1:exon
so has part: feature:1226130-1226251:-1:exon
so has part: feature:1222383-1222456:-1:exon
so has part: feature:1208833-1208930:-1:exon

XP_028903990.1
type: Protein
SIO_000068: ncbiprotein

position:1208833:-1
position: 1208833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288813:-1
position: 1288813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288571-1288813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282488-1282661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280604-1280692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278306-1278392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277954-1278017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273073-1273255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1271768-1271924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267120-1267168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1265976-1266036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265169-1265221:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1256213-1256366:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1254530-1254607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1252872-1253076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1251640-1251749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1244699-1244773:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1242565-1242684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1226130-1226251:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1222383-1222456:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1208833-1208930:-1:exon

LOC103169108
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC103169108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1298552..1302531
location: region:1298552-1302531:1
so has part: feature:1298552-1302531:1:exon
subclass of: SO_0000010

103169108
type: Gene
SIO_000068: ncbigene

position:1298552:1
position: 1298552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302531:1
position: 1302531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298552-1302531:1:exon

LOC103169108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC103169108
product: interleukin 18 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029048406.1
SIO_010081: LOC103169108
subclass of: SO_0000673
so part of: LOC103169108
location: join(1298552..1298612,1299490..1299570,1299862..1299912,1300670..1300793,1301229..1301404,1302407..1302531)
location: region:1298552-1302531:1
so has part: feature:1298552-1298612:1:exon
so has part: feature:1299490-1299570:1:exon
so has part: feature:1299862-1299912:1:exon
so has part: feature:1300670-1300793:1:exon
so has part: feature:1301229-1301404:1:exon
so has part: feature:1302407-1302531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298552-1298612:1:exon

position:1298612:1
position: 1298612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299490-1299570:1:exon

position:1299490:1
position: 1299490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299570:1
position: 1299570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1299862-1299912:1:exon

position:1299862:1
position: 1299862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299912:1
position: 1299912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1300670-1300793:1:exon

position:1300670:1
position: 1300670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300793:1
position: 1300793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1301229-1301404:1:exon

position:1301229:1
position: 1301229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301404:1
position: 1301404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1302407-1302531:1:exon

position:1302407:1
position: 1302407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103169108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC103169108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-18-binding protein
translation: MSPSRQLGATATSRWHRFLLPLLLLSRLSHFTPVPEPVKCPGLQVHGPKLEVPYGVALNLSCSGCSLNREFSEMYWLGNGSFIEDLPGAVSEGDIRKVESSESHVSLLGELRIEALSPALRHTNFSCVLLDPEGATQSHVVLDRLWDLASRDRKGGDLTESPGTRTLALVEARCTAGPGCTG
SIO_010081: LOC103169108
subclass of: SO_0000673
so part of: LOC103169108
location: join(1298582..1298612,1299490..1299570,1299862..1299912,1300670..1300793,1301229..1301404,1302407..1302492)
location: region:1298582-1302492:1
so has part: feature:1298582-1298612:1:exon
so has part: feature:1299490-1299570:1:exon
so has part: feature:1299862-1299912:1:exon
so has part: feature:1300670-1300793:1:exon
so has part: feature:1301229-1301404:1:exon
so has part: feature:1302407-1302492:1:exon

XP_028904239.1
type: Protein
SIO_000068: ncbiprotein

position:1298582:1
position: 1298582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302492:1
position: 1302492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298582-1298612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299490-1299570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1299862-1299912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1300670-1300793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301229-1301404:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1302407-1302492:1:exon

LOC100090016
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC100090016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1305099..1311770)
location: region:1305099-1311770:-1
so has part: feature:1305099-1311770:-1:exon
subclass of: SO_0000010

100090016
type: Gene
SIO_000068: ncbigene

position:1305099:-1
position: 1305099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311770:-1
position: 1311770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305099-1311770:-1:exon

LOC100090016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100090016
product: C1q and TNF related 9B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029048350.2
SIO_010081: LOC100090016
subclass of: SO_0000673
so part of: LOC100090016
location: complement(join(1305099..1306945,1307637..1307699,1309241..1309429,1311651..1311770))
location: region:1305099-1311770:-1
so has part: feature:1311651-1311770:-1:exon
so has part: feature:1309241-1309429:-1:exon
so has part: feature:1307637-1307699:-1:exon
so has part: feature:1305099-1306945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1311651-1311770:-1:exon

position:1311651:-1
position: 1311651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309241-1309429:-1:exon

position:1309241:-1
position: 1309241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309429:-1
position: 1309429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1307637-1307699:-1:exon

position:1307637:-1
position: 1307637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307699:-1
position: 1307699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1305099-1306945:-1:exon

position:1306945:-1
position: 1306945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100090016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100090016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9
translation: MSIWWVLVVAGIGTEPLLGQESCGQGQPGIPGSPGHNGLPGRDGRDGVKGDKGDTGDIGPRGRPGADGTAGQKGEPGAAGKVEEKGNKGEPGQRGWPGKFGPKGLVGPVGNRGQKGELGLQGHKGVKGDVGPVGPSGARGEAGPRGDVGPQGPVGPVGPPGPRGGEGPPGPPGGQGLQGVRGWKGERGEKGRVGDAPELMKSAFTVGLTVATKFPPSNVPVRFDRVLYNGLNDYNPTTGKFTCTFPGVYYFTYHITVYSRNVNVSLVRNGVSVLHTKDSYQGSEDQASGGTVLELKAGDQVWVQVAGGETFNGLFADPDDDTTFTGFLLFSY
SIO_010081: LOC100090016
subclass of: SO_0000673
so part of: LOC100090016
location: complement(join(1306176..1306945,1307637..1307699,1309241..1309406))
location: region:1306176-1309406:-1
so has part: feature:1309241-1309406:-1:exon
so has part: feature:1307637-1307699:-1:exon
so has part: feature:1306176-1306945:-1:exon

XP_028904183.1
type: Protein
SIO_000068: ncbiprotein

position:1306176:-1
position: 1306176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309406:-1
position: 1309406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309241-1309406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1307637-1307699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306176-1306945:-1:exon

SPATA13
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1313575..1361339)
location: region:1313575-1361339:-1
so has part: feature:1313575-1361339:-1:exon
subclass of: SO_0000010

100090035
type: Gene
SIO_000068: ncbigene

position:1313575:-1
position: 1313575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361339:-1
position: 1361339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313575-1361339:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SPATA13
product: spermatogenesis associated 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029048185.2
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1313575..1317010,1318403..1318477,1319312..1319684,1320422..1320551,1321882..1322114,1322814..1322993,1323392..1323577,1324061..1324240,1324841..1324977,1330827..1330971,1332417..1332752,1336756..1338471,1361253..1361339))
location: region:1313575-1361339:-1
so has part: feature:1361253-1361339:-1:exon
so has part: feature:1336756-1338471:-1:exon
so has part: feature:1332417-1332752:-1:exon
so has part: feature:1330827-1330971:-1:exon
so has part: feature:1324841-1324977:-1:exon
so has part: feature:1324061-1324240:-1:exon
so has part: feature:1323392-1323577:-1:exon
so has part: feature:1322814-1322993:-1:exon
so has part: feature:1321882-1322114:-1:exon
so has part: feature:1320422-1320551:-1:exon
so has part: feature:1319312-1319684:-1:exon
so has part: feature:1318403-1318477:-1:exon
so has part: feature:1313575-1317010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1361253-1361339:-1:exon

position:1361253:-1
position: 1361253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1336756-1338471:-1:exon

position:1336756:-1
position: 1336756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338471:-1
position: 1338471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1332417-1332752:-1:exon

position:1332417:-1
position: 1332417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332752:-1
position: 1332752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1330827-1330971:-1:exon

position:1330827:-1
position: 1330827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330971:-1
position: 1330971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1324841-1324977:-1:exon

position:1324841:-1
position: 1324841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324977:-1
position: 1324977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1324061-1324240:-1:exon

position:1324061:-1
position: 1324061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324240:-1
position: 1324240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1323392-1323577:-1:exon

position:1323392:-1
position: 1323392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323577:-1
position: 1323577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1322814-1322993:-1:exon

position:1322814:-1
position: 1322814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322993:-1
position: 1322993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1321882-1322114:-1:exon

position:1321882:-1
position: 1321882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322114:-1
position: 1322114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1320422-1320551:-1:exon

position:1320422:-1
position: 1320422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320551:-1
position: 1320551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1319312-1319684:-1:exon

position:1319312:-1
position: 1319312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319684:-1
position: 1319684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1318403-1318477:-1:exon

position:1318403:-1
position: 1318403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318477:-1
position: 1318477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1313575-1317010:-1:exon

position:1317010:-1
position: 1317010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13
translation: MAPVPSGREQGPLLTCVVMESPEARAAGPVSGPVADGDKEQGVRDIRLSPSKLLRFLSAVTRKRTTPTLERPHSLVLEGSSSAWSALASFRKGGAALKKLRCSLVPGTQGRAGPGDGASSGGHAERHSCAGPWSDWPRPVDRLTSDRSDPDASDDSDVGDDTFLRSTHRSRSIRRAYGVGRISLLDIDPRRPHGPGSLTPASRDPQSGDDLGRDPAGHCGVRRRSKSTDNLHFLKKSSFRRKSASSLAELKVADDQPSPAVTVSSALAGPGQSHEDHERPSSRWRSPLGVLRLVGNVADTARKREDPEDSAPAPGGGPPRARSNSRLHDDYSRRASGNWEPDRRRGPPVAWASGPSLGSPGSAIPGGPETRGRNGMFPPGPKEPKASGGAALCVAILSPEAMGQDPGSGKFPGRPASQSEGPASPPGPAPPKPQSPQSPGASPARGGTRFRCPDNLSSLSLSSMDSDGRAEATAPGPGRSPGSFRASEPPGAHDDGNEDSGISSHSQLSLNLAPGPEEPEVVPDEGRRKPPDAEKTEVPRVARRRGGSGKRPRPLSDFGQPAGRSSSIPEDSVAVESGESDRVDAGDPEAAEQPAGPGCPRGVRKRRPISVIGGVSLYTGHQEEGMKTLLAQAAARPPVPAHQVPPYKAVSARFRPLAYSQSTPVGLDRVGRRRQMRAANAHSDGGPESPALADDNGSEEDFSYEELCQPGPHYLPAGGDQLALNELLSDGSGVCAEALWDHVTMDEQELGFKAGDVIQVLEASNKDWWWGRHEDKEAWFPASFVRLRVNQEELVESAGGARGSEQDTDAGQHHHKSAENKDQMRTNVVQEIVNTERVYIKHLKDICEGYLRQCRKHPGMFTAAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEDPHLSEIGSCFLQHQAGFAIYSEYCNNHPGACVELANLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDFGNIKAAYEAMKNVARLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTQVNKQGRGQQRTFFLFDHQLVSCRKDRLRRDMLYYKGRTDTDGTELVDLEDGRDADSNAQVRHAFKLVSRKTGEVHVFCARKQEDKQRWLQACAEERRRVREDREIGVEISEAQKKQAMLNAQKPGSGKTKGLQGYRACSVPPPHQSYLPVHQRHITVPTSIPQQQVFALAEPKRKPSLFWDTFNRLTPFKK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(1316826..1317010,1318403..1318477,1319312..1319684,1320422..1320551,1321882..1322114,1322814..1322993,1323392..1323577,1324061..1324240,1324841..1324977,1330827..1330971,1332417..1332752,1336756..1338315))
location: region:1316826-1338315:-1
so has part: feature:1336756-1338315:-1:exon
so has part: feature:1332417-1332752:-1:exon
so has part: feature:1330827-1330971:-1:exon
so has part: feature:1324841-1324977:-1:exon
so has part: feature:1324061-1324240:-1:exon
so has part: feature:1323392-1323577:-1:exon
so has part: feature:1322814-1322993:-1:exon
so has part: feature:1321882-1322114:-1:exon
so has part: feature:1320422-1320551:-1:exon
so has part: feature:1319312-1319684:-1:exon
so has part: feature:1318403-1318477:-1:exon
so has part: feature:1316826-1317010:-1:exon

XP_028904018.1
type: Protein
SIO_000068: ncbiprotein

position:1316826:-1
position: 1316826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338315:-1
position: 1338315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336756-1338315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1332417-1332752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330827-1330971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324841-1324977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1324061-1324240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1323392-1323577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1322814-1322993:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1321882-1322114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1320422-1320551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1319312-1319684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1318403-1318477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1316826-1317010:-1:exon

AMER2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1405081..1419335)
location: region:1405081-1419335:-1
so has part: feature:1405081-1419335:-1:exon
subclass of: SO_0000010

103169109
type: Gene
SIO_000068: ncbigene

position:1405081:-1
position: 1405081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419335:-1
position: 1419335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405081-1419335:-1:exon

AMER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: AMER2
product: APC membrane recruitment protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029048526.2
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(1405081..1413649,1419069..1419119,1419282..1419335))
location: region:1405081-1419335:-1
so has part: feature:1419282-1419335:-1:exon
so has part: feature:1419069-1419119:-1:exon
so has part: feature:1405081-1413649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1419282-1419335:-1:exon

position:1419282:-1
position: 1419282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419069-1419119:-1:exon

position:1419069:-1
position: 1419069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419119:-1
position: 1419119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1405081-1413649:-1:exon

position:1413649:-1
position: 1413649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2
translation: MGRGLGGAVAGRDPGCSWGLFPGKADPFREVRYGKIPEAGAEEEEERERAEEAAPTAEAPPRPRPPGGPDRPAAAGDPPSEPSLDRICLLLADVASLKSFDSLTGCGDITADPEDEAGPPGAPGAPGAPGAPGPDRARPAPSPKKPKAPAFQGGGEGLATPDGRQMPRTPGTRGAGKGDADRPPDGPRDGARDGAPDSAPDRAPERARDGPPDGPPDRAPDRVPDAAPDAAPDGAQDGAPDGSLDKASDRPPERPSDGPPERPPDGPPERAPDGAPARAPAVGAREGSAAARPRLHRIPIPVPHKEDPADREKEPQEGVPNSDEGYWDSTTPGPEEDGAHRLQKEGLPRDSCSGDALYDLYADPDAAPDPEAPGGGPRSKPASPGPVTGSLKTPGGALKDSKIPISVKHLPAGHHVGHHLPPRSEAPRTKIPVSKVLVRRVSHRGLVGTALRPATACHDSAKKL
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(1412360..1413649,1419069..1419119,1419282..1419335))
location: region:1412360-1419335:-1
so has part: feature:1419282-1419335:-1:exon
so has part: feature:1419069-1419119:-1:exon
so has part: feature:1412360-1413649:-1:exon

XP_028904359.1
type: Protein
SIO_000068: ncbiprotein

position:1412360:-1
position: 1412360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419282-1419335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419069-1419119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412360-1413649:-1:exon

MTMR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1426888..1452811)
location: region:1426888-1452811:-1
so has part: feature:1426888-1452811:-1:exon
subclass of: SO_0000010

100090086
type: Gene
SIO_000068: ncbigene

position:1426888:-1
position: 1426888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452811:-1
position: 1452811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426888-1452811:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MTMR6
product: myotubularin related protein 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039914916.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1426888..1429190,1430060..1430186,1430281..1430412,1431304..1431377,1432197..1432322,1432891..1433000,1433364..1433496,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452811))
location: region:1426888-1452811:-1
so has part: feature:1452694-1452811:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431304-1431377:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1426888-1429190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452811:-1:exon

position:1452694:-1
position: 1452694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

position:1442056:-1
position: 1442056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442172:-1
position: 1442172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

position:1439747:-1
position: 1439747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439909:-1
position: 1439909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

position:1438272:-1
position: 1438272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438429:-1
position: 1438429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

position:1437916:-1
position: 1437916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438044:-1
position: 1438044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

position:1437058:-1
position: 1437058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437192:-1
position: 1437192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1433364-1433496:-1:exon

position:1433364:-1
position: 1433364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433496:-1
position: 1433496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1432891-1433000:-1:exon

position:1432891:-1
position: 1432891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433000:-1
position: 1433000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1432197-1432322:-1:exon

position:1432197:-1
position: 1432197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432322:-1
position: 1432322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1431304-1431377:-1:exon

position:1431304:-1
position: 1431304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431377:-1
position: 1431377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1430281-1430412:-1:exon

position:1430281:-1
position: 1430281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430412:-1
position: 1430412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1430060-1430186:-1:exon

position:1430060:-1
position: 1430060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430186:-1
position: 1430186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1426888-1429190:-1:exon

position:1429190:-1
position: 1429190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MTMR6
product: myotubularin related protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_029048119.2
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1426888..1429190,1430060..1430186,1430281..1430412,1431304..1431504,1431612..1431661,1432197..1432322,1432891..1433000,1433364..1433496,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452811))
location: region:1426888-1452811:-1
so has part: feature:1452694-1452811:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431612-1431661:-1:exon
so has part: feature:1431304-1431504:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1426888-1429190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431612-1431661:-1:exon

position:1431612:-1
position: 1431612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431661:-1
position: 1431661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1431304-1431504:-1:exon

position:1431504:-1
position: 1431504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426888-1429190:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MTMR6
product: myotubularin related protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029048120.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1426888..1429190,1430060..1430186,1430281..1430412,1431304..1431377,1432197..1432322,1432891..1433000,1433364..1433496,1435597..1435758,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452811))
location: region:1426888-1452811:-1
so has part: feature:1452694-1452811:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1435597-1435758:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431304-1431377:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1426888-1429190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1435597-1435758:-1:exon

position:1435597:-1
position: 1435597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435758:-1
position: 1435758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431304-1431377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426888-1429190:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MTMR6
product: myotubularin related protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029048118.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1426888..1429190,1430060..1430186,1430281..1430412,1431304..1431504,1431612..1431661,1432197..1432322,1432891..1433000,1433364..1433496,1435597..1435758,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452811))
location: region:1426888-1452811:-1
so has part: feature:1452694-1452811:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1435597-1435758:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431612-1431661:-1:exon
so has part: feature:1431304-1431504:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1426888-1429190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1435597-1435758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431612-1431661:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1431304-1431504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426888-1429190:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X4
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRAAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDTNRDYKICETYPRELYVPRIASIPVIVGSSKFRSKGRFPVLSYFHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYVYVMDTRPKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAINVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDLKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMKKKEQNQQLEKEIRELEAKIKQTKTRRSDEAPTKECLPPGQTPAQPGPRAPPCFRKEQRLGPATGGDKTIDRSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1428924..1429190,1430060..1430186,1430281..1430412,1431304..1431377,1432197..1432322,1432891..1433000,1433364..1433496,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452717))
location: region:1428924-1452717:-1
so has part: feature:1452694-1452717:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431304-1431377:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1428924-1429190:-1:exon

XP_039770850.1
type: Protein
SIO_000068: ncbiprotein

position:1428924:-1
position: 1428924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452717:-1
position: 1452717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431304-1431377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428924-1429190:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X2
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRAAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDTNRDYKICETYPRELYVPRIASIPVIVGSSKFRSKGRFPVLSYFHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYVYVMDTRPKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAINVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMVLIEKDWISFGHKFSDRCGQLGGDPKEISPVFTQFLECVWHLSEQFPQAFEFNEAFLLQIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDLKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMKKKEQNQQLEKEIRELEAKIKQTKTRRSDEAPTKECLPPGQTPAQPGPRAPPCFRKEQRLGPATGGDKTIDRSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1428924..1429190,1430060..1430186,1430281..1430412,1431304..1431504,1431612..1431661,1432197..1432322,1432891..1433000,1433364..1433496,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452717))
location: region:1428924-1452717:-1
so has part: feature:1452694-1452717:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431612-1431661:-1:exon
so has part: feature:1431304-1431504:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1428924-1429190:-1:exon

XP_028903952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431612-1431661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431304-1431504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1428924-1429190:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X3
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRAAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDTNRDYKICETYPRELYVPRIASIPVIVGSSKFRSKGRFPVLSYFHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYVYVMDTRPKRPEQSWKAAQKNIGRILVRISSKIWTDEKMRESDERARASCSEPSNVPRQFYGKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAINVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDLKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMKKKEQNQQLEKEIRELEAKIKQTKTRRSDEAPTKECLPPGQTPAQPGPRAPPCFRKEQRLGPATGGDKTIDRSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1428924..1429190,1430060..1430186,1430281..1430412,1431304..1431377,1432197..1432322,1432891..1433000,1433364..1433496,1435597..1435758,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452717))
location: region:1428924-1452717:-1
so has part: feature:1452694-1452717:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1435597-1435758:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431304-1431377:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1428924-1429190:-1:exon

XP_028903953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1435597-1435758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431304-1431377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1428924-1429190:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X1
translation: MEHIRTTKVEQVRLLDRFSSSSKSLTGTLYLTATHLLFIDSLQKETWILHHHIAAVEKLALTTSGCPLVIQCKNFRVVHFVVPRERDCHDIYNSLLQLSRRAAYDELYAFSYNPKQNECERVQGWQLVALAAEYQRMGVPNSNWQLSDTNRDYKICETYPRELYVPRIASIPVIVGSSKFRSKGRFPVLSYFHSEKEAAICRCSQPLSGFSARCLEDEHMLQAISKANPVNRYVYVMDTRPKRPEQSWKAAQKNIGRILVRISSKIWTDEKMRESDERARASCSEPSNVPRQFYGKLNAIANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGTRALSVNDFFSGLESSGWLRHIKAVLDAAIFLAKAINVENASVLVHCSDGWDRTAQVCSLGSLLLDSYYRTVRGFMVLIEKDWISFGHKFSDRCGQLGGDPKEISPVFTQFLECVWHLSEQFPQAFEFNEAFLLQIHEHVHSCQFGNFLGNHQKEREDLKLREKTYSLWPFLLEDLKKYLNPLYRPEPRRFVALEPSTVPFHLKFWRSMYHQFDRTMHPRQCVYNLIMKKKEQNQQLEKEIRELEAKIKQTKTRRSDEAPTKECLPPGQTPAQPGPRAPPCFRKEQRLGPATGGDKTIDRSDPPDNRYRDLAEEFSKADPAIVGLECGVARMAC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(1428924..1429190,1430060..1430186,1430281..1430412,1431304..1431504,1431612..1431661,1432197..1432322,1432891..1433000,1433364..1433496,1435597..1435758,1437058..1437192,1437916..1438044,1438272..1438429,1439747..1439909,1442056..1442172,1452694..1452717))
location: region:1428924-1452717:-1
so has part: feature:1452694-1452717:-1:exon
so has part: feature:1442056-1442172:-1:exon
so has part: feature:1439747-1439909:-1:exon
so has part: feature:1438272-1438429:-1:exon
so has part: feature:1437916-1438044:-1:exon
so has part: feature:1437058-1437192:-1:exon
so has part: feature:1435597-1435758:-1:exon
so has part: feature:1433364-1433496:-1:exon
so has part: feature:1432891-1433000:-1:exon
so has part: feature:1432197-1432322:-1:exon
so has part: feature:1431612-1431661:-1:exon
so has part: feature:1431304-1431504:-1:exon
so has part: feature:1430281-1430412:-1:exon
so has part: feature:1430060-1430186:-1:exon
so has part: feature:1428924-1429190:-1:exon

XP_028903951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452694-1452717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442056-1442172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439747-1439909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438272-1438429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437916-1438044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437058-1437192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1435597-1435758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1433364-1433496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432891-1433000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1432197-1432322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431612-1431661:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1431304-1431504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430281-1430412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430060-1430186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1428924-1429190:-1:exon

NUP58
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1455832..1491861
location: region:1455832-1491861:1
so has part: feature:1455832-1491861:1:exon
subclass of: SO_0000010

100089326
type: Gene
SIO_000068: ncbigene

position:1455832:1
position: 1455832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491861:1
position: 1491861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455832-1491861:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039915023.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455832..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1491555..1491861)
location: region:1455832-1491861:1
so has part: feature:1455832-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1491555-1491861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455832-1456013:1:exon

position:1456013:1
position: 1456013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

position:1463863:1
position: 1463863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464011:1
position: 1464011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

position:1465323:1
position: 1465323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465358:1
position: 1465358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

position:1466110:1
position: 1466110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466262:1
position: 1466262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

position:1466640:1
position: 1466640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466774:1
position: 1466774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

position:1467290:1
position: 1467290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467400:1
position: 1467400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

position:1468810:1
position: 1468810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468834:1
position: 1468834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

position:1469546:1
position: 1469546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469611:1
position: 1469611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

position:1469788:1
position: 1469788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469962:1
position: 1469962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

position:1470881:1
position: 1470881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470960:1
position: 1470960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

position:1471508:1
position: 1471508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471626:1
position: 1471626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

position:1472453:1
position: 1472453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472535:1
position: 1472535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

position:1473515:1
position: 1473515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473716:1
position: 1473716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

position:1479366:1
position: 1479366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479464:1
position: 1479464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

position:1480728:1
position: 1480728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480823:1
position: 1480823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1491555-1491861:1:exon

position:1491555:1
position: 1491555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039915024.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455832..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1491555..1491861)
location: region:1455832-1491861:1
so has part: feature:1455832-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1491555-1491861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455832-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491555-1491861:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039915021.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455832..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483708..1485186)
location: region:1455832-1485186:1
so has part: feature:1455832-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483708-1485186:1:exon

position:1485186:1
position: 1485186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455832-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483708-1485186:1:exon

position:1483708:1
position: 1483708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029048588.2
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455832..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483037..1483338)
location: region:1455832-1483338:1
so has part: feature:1455832-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483037-1483338:1:exon

position:1483338:1
position: 1483338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455832-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483037-1483338:1:exon

position:1483037:1
position: 1483037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X5
translation: MLGHLKKEKLGESEGCPLNVRAAQLTGRADLIMPKKKNLWYLELIGDEDFVSARSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGASFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTATKPSGSLSAGPQLLLLTKPSVIESDEVGRKYQF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455850..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1491555..1491628)
location: region:1455850-1491628:1
so has part: feature:1455850-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1491555-1491628:1:exon

XP_039770957.1
type: Protein
SIO_000068: ncbiprotein

position:1455850:1
position: 1455850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491628:1
position: 1491628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455850-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1491555-1491628:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X6
translation: MLGHLKKEKLGESEGCPLNVRAAQLTGRADLIMPKKKNLWYLELIGDEDFVSARSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQLLLLTKPSVIESDEVGRKYQF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455850..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1491555..1491628)
location: region:1455850-1491628:1
so has part: feature:1455850-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1491555-1491628:1:exon

XP_039770958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1455850-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1491555-1491628:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X1
translation: MLGHLKKEKLGESEGCPLNVRAAQLTGRADLIMPKKKNLWYLELIGDEDFVSARSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGASFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTATKPSGSLSADVQTLPQSLPSRSLPREILRLPILGFDAPKKTNPQSSDLGRRARAALRRRFFLRPAAVILAVWRWSRWASVAFPHPASTPPFPPAATPKIGAPSPDPVGRFDRDLERSPLPNRPSPGARWRCVAFQKLALRSTFRVLDRRRGASRARSQSSHFYARAGRRAVVLQWTHF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455850..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483708..1484216)
location: region:1455850-1484216:1
so has part: feature:1455850-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483708-1484216:1:exon

XP_039770955.1
type: Protein
SIO_000068: ncbiprotein

position:1484216:1
position: 1484216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455850-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483708-1484216:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X3
translation: MLGHLKKEKLGESEGCPLNVRAAQLTGRADLIMPKKKNLWYLELIGDEDFVSARSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGASFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTATKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGLGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1455850..1456013,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483037..1483206)
location: region:1455850-1483206:1
so has part: feature:1455850-1456013:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483037-1483206:1:exon

XP_028904421.2
type: Protein
SIO_000068: ncbiprotein

position:1483206:1
position: 1483206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455850-1456013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483037-1483206:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039915022.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1457094..1457206,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483708..1485186)
location: region:1457094-1485186:1
so has part: feature:1457094-1457206:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483708-1485186:1:exon

position:1457094:1
position: 1457094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457094-1457206:1:exon

position:1457206:1
position: 1457206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483708-1485186:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP58
product: nucleoporin 58, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_001516685.4
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1457094..1457206,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483037..1483338)
location: region:1457094-1483338:1
so has part: feature:1457094-1457206:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483037-1483338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1457094-1457206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483037-1483338:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X2
translation: MSAGFSFGTGTLGPAAGPAATAAGFSFGAGTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGASFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTATKPSGSLSADVQTLPQSLPSRSLPREILRLPILGFDAPKKTNPQSSDLGRRARAALRRRFFLRPAAVILAVWRWSRWASVAFPHPASTPPFPPAATPKIGAPSPDPVGRFDRDLERSPLPNRPSPGARWRCVAFQKLALRSTFRVLDRRRGASRARSQSSHFYARAGRRAVVLQWTHF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1457109..1457206,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483708..1484216)
location: region:1457109-1484216:1
so has part: feature:1457109-1457206:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483708-1484216:1:exon

XP_039770956.1
type: Protein
SIO_000068: ncbiprotein

position:1457109:1
position: 1457109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457109-1457206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483708-1484216:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X4
translation: MSAGFSFGTGTLGPAAGPAATAAGFSFGAGTTSNIGTTGGLNFGTLGGTTTPATTAAPSVGFGTGLFATKSTTGFTLGGTNTGTATTIATGLTLGTPATTSASTTGFSLGFTKPAASATPFALPITSTSAGGLSLSSALTSTPAAASTGFTLNLGGTPATTTTASTGLSLGGALAGLGGALFQNTNTAASGLGQNALGLALGSTAAPSTTGNEGLGGIDFSGSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKDQYLGYRKIFLGDAIDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATGPQPSLGVGLGASFGSGIGTGLQSSGLGSSTLGGFGTSSGFGSSTSGASSFGFGTATKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGLGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(1457109..1457206,1463863..1464011,1465323..1465358,1466110..1466262,1466640..1466774,1467290..1467400,1468810..1468834,1469546..1469611,1469788..1469962,1470881..1470960,1471508..1471626,1472453..1472535,1473515..1473716,1479366..1479464,1480728..1480823,1483037..1483206)
location: region:1457109-1483206:1
so has part: feature:1457109-1457206:1:exon
so has part: feature:1463863-1464011:1:exon
so has part: feature:1465323-1465358:1:exon
so has part: feature:1466110-1466262:1:exon
so has part: feature:1466640-1466774:1:exon
so has part: feature:1467290-1467400:1:exon
so has part: feature:1468810-1468834:1:exon
so has part: feature:1469546-1469611:1:exon
so has part: feature:1469788-1469962:1:exon
so has part: feature:1470881-1470960:1:exon
so has part: feature:1471508-1471626:1:exon
so has part: feature:1472453-1472535:1:exon
so has part: feature:1473515-1473716:1:exon
so has part: feature:1479366-1479464:1:exon
so has part: feature:1480728-1480823:1:exon
so has part: feature:1483037-1483206:1:exon

XP_001516735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1457109-1457206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463863-1464011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465323-1465358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466110-1466262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466640-1466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467290-1467400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1468810-1468834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469546-1469611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469788-1469962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1470881-1470960:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471508-1471626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472453-1472535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473515-1473716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479366-1479464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1480728-1480823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483037-1483206:1:exon

SHISA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1503340..1510184
location: region:1503340-1510184:1
so has part: feature:1503340-1510184:1:exon
subclass of: SO_0000010

100681036
type: Gene
SIO_000068: ncbigene

position:1503340:1
position: 1503340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510184:1
position: 1510184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503340-1510184:1:exon

SHISA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SHISA2
product: shisa family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_029048591.2
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: join(1503340..1503891,1509304..1510184)
location: region:1503340-1510184:1
so has part: feature:1503340-1503891:1:exon
so has part: feature:1509304-1510184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1503340-1503891:1:exon

position:1503891:1
position: 1503891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1509304-1510184:1:exon

position:1509304:1
position: 1509304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHISA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-2 homolog
translation: MPPGGGRSFSARPLLRRPPGSPGCWRRPWAPVPGLLLLLLLLLLLPPAARGGGEYCHGWRDPQGGWRPGFQCPERFDAGDAAICCGGCTLRYCCASRAARLDQGGCHDRPGPGHPDPDPAHPDPRGRDPGTPGAAVPIYVPFLIVGSVFVAFIIVGSLVAACCCRCLRPKQEPQPSRAPAGSRLMETIPMIPSASTSRGSSSRQSSTAASSSSSANSGARAPPARSQTNCCLPEGTMNNVYVNMPTNFSVLNCQQATQIVPHQGQYLHPQYVGYTVPHDSVPITPVPPFLDGLQPGFRQIQSPYPAHAQGEQKMYPAVTV
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: join(1503486..1503891,1509304..1509860)
location: region:1503486-1509860:1
so has part: feature:1503486-1503891:1:exon
so has part: feature:1509304-1509860:1:exon

XP_028904424.1
type: Protein
SIO_000068: ncbiprotein

position:1503486:1
position: 1503486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509860:1
position: 1509860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503486-1503891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1509304-1509860:1:exon

ATP8A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1514449..1816410)
location: region:1514449-1816410:-1
so has part: feature:1514449-1816410:-1:exon
subclass of: SO_0000010

100090122
type: Gene
SIO_000068: ncbigene

position:1514449:-1
position: 1514449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816410:-1
position: 1816410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1514449-1816410:-1:exon

ATP8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ATP8A2
product: ATPase phospholipid transporting 8A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029048279.1
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514449..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1737153..1737226,1740419..1740459,1741020..1741065,1743152..1743250,1747656..1747755,1773362..1773509,1816256..1816410))
location: region:1514449-1816410:-1
so has part: feature:1816256-1816410:-1:exon
so has part: feature:1773362-1773509:-1:exon
so has part: feature:1747656-1747755:-1:exon
so has part: feature:1743152-1743250:-1:exon
so has part: feature:1741020-1741065:-1:exon
so has part: feature:1740419-1740459:-1:exon
so has part: feature:1737153-1737226:-1:exon
so has part: feature:1735540-1735609:-1:exon
so has part: feature:1734138-1734265:-1:exon
so has part: feature:1730980-1731091:-1:exon
so has part: feature:1727970-1728135:-1:exon
so has part: feature:1726352-1726479:-1:exon
so has part: feature:1725968-1726045:-1:exon
so has part: feature:1724940-1725028:-1:exon
so has part: feature:1722258-1722302:-1:exon
so has part: feature:1721462-1721537:-1:exon
so has part: feature:1716317-1716422:-1:exon
so has part: feature:1715511-1715593:-1:exon
so has part: feature:1713055-1713104:-1:exon
so has part: feature:1710763-1710832:-1:exon
so has part: feature:1708436-1708520:-1:exon
so has part: feature:1706346-1706485:-1:exon
so has part: feature:1697917-1698055:-1:exon
so has part: feature:1690077-1690141:-1:exon
so has part: feature:1648251-1648423:-1:exon
so has part: feature:1611819-1612002:-1:exon
so has part: feature:1609064-1609174:-1:exon
so has part: feature:1580819-1580893:-1:exon
so has part: feature:1577611-1577733:-1:exon
so has part: feature:1575221-1575299:-1:exon
so has part: feature:1567306-1567367:-1:exon
so has part: feature:1566910-1566966:-1:exon
so has part: feature:1564419-1564526:-1:exon
so has part: feature:1524919-1525007:-1:exon
so has part: feature:1524024-1524128:-1:exon
so has part: feature:1516343-1516434:-1:exon
so has part: feature:1514449-1514801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1816256-1816410:-1:exon

position:1816256:-1
position: 1816256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773362-1773509:-1:exon

position:1773362:-1
position: 1773362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773509:-1
position: 1773509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1747656-1747755:-1:exon

position:1747656:-1
position: 1747656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747755:-1
position: 1747755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1743152-1743250:-1:exon

position:1743152:-1
position: 1743152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1743250:-1
position: 1743250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1741020-1741065:-1:exon

position:1741020:-1
position: 1741020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741065:-1
position: 1741065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1740419-1740459:-1:exon

position:1740419:-1
position: 1740419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740459:-1
position: 1740459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1737153-1737226:-1:exon

position:1737153:-1
position: 1737153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737226:-1
position: 1737226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1735540-1735609:-1:exon

position:1735540:-1
position: 1735540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735609:-1
position: 1735609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1734138-1734265:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:1730980-1731091:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:1727970-1728135:-1:exon

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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1725968-1726045:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:1724940-1725028:-1:exon

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urn:…
SIO_000300: 15
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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1716317-1716422:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1715511-1715593:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:1713055-1713104:-1:exon

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urn:…
SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:1708436-1708520:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:1706346-1706485:-1:exon

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urn:…
SIO_000300: 23
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SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:1648251-1648423:-1:exon

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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 30
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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ATP8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ATP8A2
product: ATPase phospholipid transporting 8A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029048280.2
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514449..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1737153..1737226,1740419..1740459,1741020..1741065,1743152..1743250,1747656..1747755,1773362..1773509,1780503..1780572))
location: region:1514449-1780572:-1
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position:1780572:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1780503-1780572:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:1773362-1773509:-1:exon

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SIO_000300: 3
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SIO_000628: feature:1727970-1728135:-1:exon

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SIO_000300: 12
SIO_000628: feature:1726352-1726479:-1:exon

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SIO_000300: 13
SIO_000628: feature:1725968-1726045:-1:exon

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SIO_000300: 14
SIO_000628: feature:1724940-1725028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722258-1722302:-1:exon

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SIO_000628: feature:1721462-1721537:-1:exon

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SIO_000628: feature:1716317-1716422:-1:exon

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SIO_000300: 18
SIO_000628: feature:1715511-1715593:-1:exon

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SIO_000300: 19
SIO_000628: feature:1713055-1713104:-1:exon

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SIO_000300: 20
SIO_000628: feature:1710763-1710832:-1:exon

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SIO_000300: 21
SIO_000628: feature:1708436-1708520:-1:exon

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SIO_000300: 22
SIO_000628: feature:1706346-1706485:-1:exon

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SIO_000300: 23
SIO_000628: feature:1697917-1698055:-1:exon

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SIO_000628: feature:1690077-1690141:-1:exon

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SIO_000628: feature:1611819-1612002:-1:exon

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SIO_000628: feature:1580819-1580893:-1:exon

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SIO_000300: 29
SIO_000628: feature:1577611-1577733:-1:exon

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SIO_000300: 30
SIO_000628: feature:1575221-1575299:-1:exon

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SIO_000300: 31
SIO_000628: feature:1567306-1567367:-1:exon

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SIO_000300: 32
SIO_000628: feature:1566910-1566966:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1564419-1564526:-1:exon

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SIO_000300: 34
SIO_000628: feature:1524919-1525007:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1524024-1524128:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1516343-1516434:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1514449-1514801:-1:exon

ATP8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ATP8A2
product: ATPase phospholipid transporting 8A2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029048281.1
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514449..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1740419..1740459,1741020..1741065,1743152..1743198))
location: region:1514449-1743198:-1
so has part: feature:1743152-1743198:-1:exon
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so has part: feature:1516343-1516434:-1:exon
so has part: feature:1514449-1514801:-1:exon

position:1743198:-1
position: 1743198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1743152-1743198:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:1514449-1514801:-1:exon

ATP8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB isoform X1
translation: MPTGPGLDKAVKMSLRSKSRIHSSAGAVGSSSGYKKADDEMSGAASSAELEEAAAARTIYLNRPQHAKFRDNRVSTAKYSVVTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIFILTVAGIKEIIEDYERHKADNTVNKKKTIVLRNGMWQNIIWKEVAVGDIVKVTNGQHLPADMIIVSSSEPQAMCYIETSNLDGETNLKIRQGLTQTANLQSREELIKVTGKIECEGPNRHLYDFIGNLRLDGNSPVPIGPDQILLRGAQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALLWNRTHGQVNWYLGTTEAVSNNFGYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELVRERSSEDFSQLSPPTSESCEFDDPRLLQNIESQHPTAACIQEFLTLLAVCHTVVPERAGSTIIYQASSPDEGALVKGAKKLGFVFTGRTPHSVIIEALGQEETFEILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADNVIFERLSKNSQYMEQTLCHLEYFATEGLRTLCVAYVDLSESTYREWLQTYNQASTILKDRAQRLEECYEIIEKDLMLLGATAIEDRLQAGVPETIATLMKAEIKIWILTGDKQETAINIGYSCRLVSQSMSLILVNEDSLDATRAALTQHCTSLGDSLGKENDIALIIDGQTLKYALSFEVRQSFLDLALSCKAVICCRVSPLQKSEIVDMVKKHVNAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSIAQFAYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERTCTQESMLRFPQLYKITQNADGFNTKVFWGHCINALIHSIILFWFPLKVLEHDSVFTSGHVTDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLLWLVFFGVYSTFWPVIPIAPDMVGQARMVLQCGHFWLGLLLVPMTCLIEDVAWRAAKHTYRKTLLEQVQELETKSRELGRAALRDSNGKSVNERDHLLKRLGRKTPPTLFRAHSIQQGVPHGYAFSQEEHGVVSQSEVVRSYDTTKQRTRPA
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514704..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1737153..1737226,1740419..1740459,1741020..1741065,1743152..1743250,1747656..1747755,1773362..1773509,1816256..1816331))
location: region:1514704-1816331:-1
so has part: feature:1816256-1816331:-1:exon
so has part: feature:1773362-1773509:-1:exon
so has part: feature:1747656-1747755:-1:exon
so has part: feature:1743152-1743250:-1:exon
so has part: feature:1741020-1741065:-1:exon
so has part: feature:1740419-1740459:-1:exon
so has part: feature:1737153-1737226:-1:exon
so has part: feature:1735540-1735609:-1:exon
so has part: feature:1734138-1734265:-1:exon
so has part: feature:1730980-1731091:-1:exon
so has part: feature:1727970-1728135:-1:exon
so has part: feature:1726352-1726479:-1:exon
so has part: feature:1725968-1726045:-1:exon
so has part: feature:1724940-1725028:-1:exon
so has part: feature:1722258-1722302:-1:exon
so has part: feature:1721462-1721537:-1:exon
so has part: feature:1716317-1716422:-1:exon
so has part: feature:1715511-1715593:-1:exon
so has part: feature:1713055-1713104:-1:exon
so has part: feature:1710763-1710832:-1:exon
so has part: feature:1708436-1708520:-1:exon
so has part: feature:1706346-1706485:-1:exon
so has part: feature:1697917-1698055:-1:exon
so has part: feature:1690077-1690141:-1:exon
so has part: feature:1648251-1648423:-1:exon
so has part: feature:1611819-1612002:-1:exon
so has part: feature:1609064-1609174:-1:exon
so has part: feature:1580819-1580893:-1:exon
so has part: feature:1577611-1577733:-1:exon
so has part: feature:1575221-1575299:-1:exon
so has part: feature:1567306-1567367:-1:exon
so has part: feature:1566910-1566966:-1:exon
so has part: feature:1564419-1564526:-1:exon
so has part: feature:1524919-1525007:-1:exon
so has part: feature:1524024-1524128:-1:exon
so has part: feature:1516343-1516434:-1:exon
so has part: feature:1514704-1514801:-1:exon

XP_028904112.1
type: Protein
SIO_000068: ncbiprotein

position:1514704:-1
position: 1514704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816331:-1
position: 1816331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816256-1816331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773362-1773509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747656-1747755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1743152-1743250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1741020-1741065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740419-1740459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1737153-1737226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735540-1735609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1734138-1734265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1730980-1731091:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1727970-1728135:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726352-1726479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1725968-1726045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1724940-1725028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722258-1722302:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1721462-1721537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1716317-1716422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1715511-1715593:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713055-1713104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1710763-1710832:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708436-1708520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1706346-1706485:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1697917-1698055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1690077-1690141:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1648251-1648423:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1611819-1612002:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1609064-1609174:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1580819-1580893:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1577611-1577733:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1575221-1575299:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1567306-1567367:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1566910-1566966:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1564419-1564526:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1524919-1525007:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1524024-1524128:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1516343-1516434:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1514704-1514801:-1:exon

ATP8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB isoform X2
translation: MKKGPGAVGSSSGYKKADDEMSGAASSAELEEAAAARTIYLNRPQHAKFRDNRVSTAKYSVVTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIFILTVAGIKEIIEDYERHKADNTVNKKKTIVLRNGMWQNIIWKEVAVGDIVKVTNGQHLPADMIIVSSSEPQAMCYIETSNLDGETNLKIRQGLTQTANLQSREELIKVTGKIECEGPNRHLYDFIGNLRLDGNSPVPIGPDQILLRGAQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALLWNRTHGQVNWYLGTTEAVSNNFGYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELVRERSSEDFSQLSPPTSESCEFDDPRLLQNIESQHPTAACIQEFLTLLAVCHTVVPERAGSTIIYQASSPDEGALVKGAKKLGFVFTGRTPHSVIIEALGQEETFEILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADNVIFERLSKNSQYMEQTLCHLEYFATEGLRTLCVAYVDLSESTYREWLQTYNQASTILKDRAQRLEECYEIIEKDLMLLGATAIEDRLQAGVPETIATLMKAEIKIWILTGDKQETAINIGYSCRLVSQSMSLILVNEDSLDATRAALTQHCTSLGDSLGKENDIALIIDGQTLKYALSFEVRQSFLDLALSCKAVICCRVSPLQKSEIVDMVKKHVNAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSIAQFAYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERTCTQESMLRFPQLYKITQNADGFNTKVFWGHCINALIHSIILFWFPLKVLEHDSVFTSGHVTDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLLWLVFFGVYSTFWPVIPIAPDMVGQARMVLQCGHFWLGLLLVPMTCLIEDVAWRAAKHTYRKTLLEQVQELETKSRELGRAALRDSNGKSVNERDHLLKRLGRKTPPTLFRAHSIQQGVPHGYAFSQEEHGVVSQSEVVRSYDTTKQRTRPA
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514704..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1737153..1737226,1740419..1740459,1741020..1741065,1743152..1743250,1747656..1747755,1773362..1773509,1780503..1780518))
location: region:1514704-1780518:-1
so has part: feature:1780503-1780518:-1:exon
so has part: feature:1773362-1773509:-1:exon
so has part: feature:1747656-1747755:-1:exon
so has part: feature:1743152-1743250:-1:exon
so has part: feature:1741020-1741065:-1:exon
so has part: feature:1740419-1740459:-1:exon
so has part: feature:1737153-1737226:-1:exon
so has part: feature:1735540-1735609:-1:exon
so has part: feature:1734138-1734265:-1:exon
so has part: feature:1730980-1731091:-1:exon
so has part: feature:1727970-1728135:-1:exon
so has part: feature:1726352-1726479:-1:exon
so has part: feature:1725968-1726045:-1:exon
so has part: feature:1724940-1725028:-1:exon
so has part: feature:1722258-1722302:-1:exon
so has part: feature:1721462-1721537:-1:exon
so has part: feature:1716317-1716422:-1:exon
so has part: feature:1715511-1715593:-1:exon
so has part: feature:1713055-1713104:-1:exon
so has part: feature:1710763-1710832:-1:exon
so has part: feature:1708436-1708520:-1:exon
so has part: feature:1706346-1706485:-1:exon
so has part: feature:1697917-1698055:-1:exon
so has part: feature:1690077-1690141:-1:exon
so has part: feature:1648251-1648423:-1:exon
so has part: feature:1611819-1612002:-1:exon
so has part: feature:1609064-1609174:-1:exon
so has part: feature:1580819-1580893:-1:exon
so has part: feature:1577611-1577733:-1:exon
so has part: feature:1575221-1575299:-1:exon
so has part: feature:1567306-1567367:-1:exon
so has part: feature:1566910-1566966:-1:exon
so has part: feature:1564419-1564526:-1:exon
so has part: feature:1524919-1525007:-1:exon
so has part: feature:1524024-1524128:-1:exon
so has part: feature:1516343-1516434:-1:exon
so has part: feature:1514704-1514801:-1:exon

XP_028904113.1
type: Protein
SIO_000068: ncbiprotein

position:1780518:-1
position: 1780518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1780503-1780518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773362-1773509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747656-1747755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1743152-1743250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1741020-1741065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740419-1740459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1737153-1737226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735540-1735609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1734138-1734265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1730980-1731091:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1727970-1728135:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726352-1726479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1725968-1726045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1724940-1725028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722258-1722302:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1721462-1721537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1716317-1716422:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1715511-1715593:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713055-1713104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1710763-1710832:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708436-1708520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1706346-1706485:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1697917-1698055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1690077-1690141:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1648251-1648423:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1611819-1612002:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1609064-1609174:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1580819-1580893:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1577611-1577733:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1575221-1575299:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1567306-1567367:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1566910-1566966:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1564419-1564526:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1524919-1525007:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1524024-1524128:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1516343-1516434:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1514704-1514801:-1:exon

ATP8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ATP8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB isoform X3
translation: MVCGRTSFGKSEPQAMCYIETSNLDGETNLKIRQGLTQTANLQSREELIKVTGKIECEGPNRHLYDFIGNLRLDGNSPVPIGPDQILLRGAQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALLWNRTHGQVNWYLGTTEAVSNNFGYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELVRERSSEDFSQLSPPTSESCEFDDPRLLQNIESQHPTAACIQEFLTLLAVCHTVVPERAGSTIIYQASSPDEGALVKGAKKLGFVFTGRTPHSVIIEALGQEETFEILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADNVIFERLSKNSQYMEQTLCHLEYFATEGLRTLCVAYVDLSESTYREWLQTYNQASTILKDRAQRLEECYEIIEKDLMLLGATAIEDRLQAGVPETIATLMKAEIKIWILTGDKQETAINIGYSCRLVSQSMSLILVNEDSLDATRAALTQHCTSLGDSLGKENDIALIIDGQTLKYALSFEVRQSFLDLALSCKAVICCRVSPLQKSEIVDMVKKHVNAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSIAQFAYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERTCTQESMLRFPQLYKITQNADGFNTKVFWGHCINALIHSIILFWFPLKVLEHDSVFTSGHVTDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLLWLVFFGVYSTFWPVIPIAPDMVGQARMVLQCGHFWLGLLLVPMTCLIEDVAWRAAKHTYRKTLLEQVQELETKSRELGRAALRDSNGKSVNERDHLLKRLGRKTPPTLFRAHSIQQGVPHGYAFSQEEHGVVSQSEVVRSYDTTKQRTRPA
SIO_010081: ATP8A2
subclass of: SO_0000673
so part of: ATP8A2
location: complement(join(1514704..1514801,1516343..1516434,1524024..1524128,1524919..1525007,1564419..1564526,1566910..1566966,1567306..1567367,1575221..1575299,1577611..1577733,1580819..1580893,1609064..1609174,1611819..1612002,1648251..1648423,1690077..1690141,1697917..1698055,1706346..1706485,1708436..1708520,1710763..1710832,1713055..1713104,1715511..1715593,1716317..1716422,1721462..1721537,1722258..1722302,1724940..1725028,1725968..1726045,1726352..1726479,1727970..1728135,1730980..1731091,1734138..1734265,1735540..1735609,1740419..1740450))
location: region:1514704-1740450:-1
so has part: feature:1740419-1740450:-1:exon
so has part: feature:1735540-1735609:-1:exon
so has part: feature:1734138-1734265:-1:exon
so has part: feature:1730980-1731091:-1:exon
so has part: feature:1727970-1728135:-1:exon
so has part: feature:1726352-1726479:-1:exon
so has part: feature:1725968-1726045:-1:exon
so has part: feature:1724940-1725028:-1:exon
so has part: feature:1722258-1722302:-1:exon
so has part: feature:1721462-1721537:-1:exon
so has part: feature:1716317-1716422:-1:exon
so has part: feature:1715511-1715593:-1:exon
so has part: feature:1713055-1713104:-1:exon
so has part: feature:1710763-1710832:-1:exon
so has part: feature:1708436-1708520:-1:exon
so has part: feature:1706346-1706485:-1:exon
so has part: feature:1697917-1698055:-1:exon
so has part: feature:1690077-1690141:-1:exon
so has part: feature:1648251-1648423:-1:exon
so has part: feature:1611819-1612002:-1:exon
so has part: feature:1609064-1609174:-1:exon
so has part: feature:1580819-1580893:-1:exon
so has part: feature:1577611-1577733:-1:exon
so has part: feature:1575221-1575299:-1:exon
so has part: feature:1567306-1567367:-1:exon
so has part: feature:1566910-1566966:-1:exon
so has part: feature:1564419-1564526:-1:exon
so has part: feature:1524919-1525007:-1:exon
so has part: feature:1524024-1524128:-1:exon
so has part: feature:1516343-1516434:-1:exon
so has part: feature:1514704-1514801:-1:exon

XP_028904114.1
type: Protein
SIO_000068: ncbiprotein

position:1740450:-1
position: 1740450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740419-1740450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1735540-1735609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734138-1734265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1730980-1731091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1727970-1728135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1726352-1726479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1725968-1726045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1724940-1725028:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1722258-1722302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1721462-1721537:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1716317-1716422:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1715511-1715593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1713055-1713104:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1710763-1710832:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1708436-1708520:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1706346-1706485:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1697917-1698055:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690077-1690141:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1648251-1648423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1611819-1612002:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1609064-1609174:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1580819-1580893:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1577611-1577733:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1575221-1575299:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567306-1567367:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566910-1566966:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1564419-1564526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1524919-1525007:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1524024-1524128:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1516343-1516434:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1514704-1514801:-1:exon

LOC114805875
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1789190..1799086
location: region:1789190-1799086:1
so has part: feature:1789190-1799086:1:exon
subclass of: SO_0000011

114805875
type: Gene
SIO_000068: ncbigene

position:1789190:1
position: 1789190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799086:1
position: 1799086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789190-1799086:1:exon

LOC114805875
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805875
product: uncharacterized LOC114805875, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003753946.2
SIO_010081: LOC114805875
subclass of: SO_0000673
so part of: LOC114805875
location: join(1789190..1789368,1790068..1790205,1798693..1799086)
location: region:1789190-1799086:1
so has part: feature:1789190-1789368:1:exon
so has part: feature:1790068-1790205:1:exon
so has part: feature:1798693-1799086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1789190-1789368:1:exon

position:1789368:1
position: 1789368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1790068-1790205:1:exon

position:1790068:1
position: 1790068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790205:1
position: 1790205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1798693-1799086:1:exon

position:1798693:1
position: 1798693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114805875
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805875
product: uncharacterized LOC114805875, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003753945.2
SIO_010081: LOC114805875
subclass of: SO_0000673
so part of: LOC114805875
location: join(1789190..1789368,1790068..1790344)
location: region:1789190-1790344:1
so has part: feature:1789190-1789368:1:exon
so has part: feature:1790068-1790344:1:exon

position:1790344:1
position: 1790344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789190-1789368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1790068-1790344:1:exon

LOC114805978
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805978
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1819891..1820029)
location: region:1819891-1820029:-1
so has part: feature:1819891-1820029:-1:exon
subclass of: SO_0000578

114805978
type: Gene
SIO_000068: ncbigene

position:1819891:-1
position: 1819891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820029:-1
position: 1820029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819891-1820029:-1:exon

LOC114805978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: snoRNA
gene: LOC114805978
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003754109.1
SIO_010081: LOC114805978
subclass of: SO_0000673
so part of: LOC114805978
location: complement(1819891..1820029)
location: region:1819891-1820029:-1
so has part: feature:1819891-1820029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1819891-1820029:-1:exon

CDK8
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1832450..1921131
location: region:1832450-1921131:1
so has part: feature:1832450-1921131:1:exon
subclass of: SO_0000010

100089343
type: Gene
SIO_000068: ncbigene

position:1832450:1
position: 1832450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921131:1
position: 1921131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832450-1921131:1:exon

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_007664104.3
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832450..1832844,1881475..1881550,1887843..1887953,1891514..1891654,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917390..1917545,1919836..1921131)
location: region:1832450-1921131:1
so has part: feature:1832450-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1891514-1891654:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917390-1917545:1:exon
so has part: feature:1919836-1921131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1832450-1832844:1:exon

position:1832844:1
position: 1832844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

position:1881475:1
position: 1881475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881550:1
position: 1881550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

position:1887843:1
position: 1887843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1887953:1
position: 1887953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1891514-1891654:1:exon

position:1891514:1
position: 1891514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891654:1
position: 1891654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1903589-1903646:1:exon

position:1903589:1
position: 1903589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903646:1
position: 1903646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1906341-1906472:1:exon

position:1906341:1
position: 1906341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906472:1
position: 1906472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1910359-1910502:1:exon

position:1910359:1
position: 1910359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910502:1
position: 1910502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1911183-1911252:1:exon

position:1911183:1
position: 1911183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911252:1
position: 1911252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1913405-1913477:1:exon

position:1913405:1
position: 1913405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913477:1
position: 1913477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1915984-1916081:1:exon

position:1915984:1
position: 1915984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916081:1
position: 1916081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1917207-1917285:1:exon

position:1917207:1
position: 1917207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917285:1
position: 1917285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1917390-1917545:1:exon

position:1917390:1
position: 1917390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917545:1
position: 1917545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1919836-1921131:1:exon

position:1919836:1
position: 1919836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_001516766.4
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832452..1832844,1881475..1881550,1887843..1887953,1891514..1891654,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1921131)
location: region:1832452-1921131:1
so has part: feature:1832452-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1891514-1891654:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1921131:1:exon

position:1832452:1
position: 1832452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832452-1832844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891514-1891654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917387-1917545:1:exon

position:1917387:1
position: 1917387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1919836-1921131:1:exon

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_007664105.3
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832452..1832844,1881475..1881550,1887843..1887953,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1921131)
location: region:1832452-1921131:1
so has part: feature:1832452-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1921131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1832452-1832844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917387-1917545:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1919836-1921131:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X1
translation: MDYDFKVKLSGERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832717..1832844,1881475..1881550,1887843..1887953,1891514..1891654,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1919961)
location: region:1832717-1919961:1
so has part: feature:1832717-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1891514-1891654:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1919961:1:exon

XP_001516816.1
type: Protein
SIO_000068: ncbiprotein

position:1832717:1
position: 1832717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1919961:1
position: 1919961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832717-1832844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891514-1891654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917387-1917545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1919836-1919961:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X2
translation: MDYDFKVKLSGERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832717..1832844,1881475..1881550,1887843..1887953,1891514..1891654,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917390..1917545,1919836..1919961)
location: region:1832717-1919961:1
so has part: feature:1832717-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1891514-1891654:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917390-1917545:1:exon
so has part: feature:1919836-1919961:1:exon

XP_007662294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1832717-1832844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891514-1891654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1917390-1917545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1919836-1919961:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X3
translation: MDYDFKVKLSGERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1832717..1832844,1881475..1881550,1887843..1887953,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1919961)
location: region:1832717-1919961:1
so has part: feature:1832717-1832844:1:exon
so has part: feature:1881475-1881550:1:exon
so has part: feature:1887843-1887953:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1919961:1:exon

XP_007662295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1832717-1832844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881475-1881550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1887843-1887953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917387-1917545:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1919836-1919961:1:exon

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CDK8
product: cyclin dependent kinase 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039914937.1
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1891952..1892003,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1921131)
location: region:1891952-1921131:1
so has part: feature:1891952-1892003:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1921131:1:exon

position:1891952:1
position: 1891952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891952-1892003:1:exon

position:1892003:1
position: 1892003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1917387-1917545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1919836-1921131:1:exon

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8 isoform X4
translation: MKKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSGHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSTTSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(1891998..1892003,1903589..1903646,1906341..1906472,1910359..1910502,1911183..1911252,1913405..1913477,1915984..1916081,1917207..1917285,1917387..1917545,1919836..1919961)
location: region:1891998-1919961:1
so has part: feature:1891998-1892003:1:exon
so has part: feature:1903589-1903646:1:exon
so has part: feature:1906341-1906472:1:exon
so has part: feature:1910359-1910502:1:exon
so has part: feature:1911183-1911252:1:exon
so has part: feature:1913405-1913477:1:exon
so has part: feature:1915984-1916081:1:exon
so has part: feature:1917207-1917285:1:exon
so has part: feature:1917387-1917545:1:exon
so has part: feature:1919836-1919961:1:exon

XP_039770871.1
type: Protein
SIO_000068: ncbiprotein

position:1891998:1
position: 1891998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891998-1892003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1903589-1903646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906341-1906472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1910359-1910502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1911183-1911252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1913405-1913477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915984-1916081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917207-1917285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1917387-1917545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1919836-1919961:1:exon

LOC114805989
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805989
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1904471..1904608
location: region:1904471-1904608:1
so has part: feature:1904471-1904608:1:exon
subclass of: SO_0000578

114805989
type: Gene
SIO_000068: ncbigene

position:1904471:1
position: 1904471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904608:1
position: 1904608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1904471-1904608:1:exon

LOC114805989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: snoRNA
gene: LOC114805989
product: small nucleolar RNA SNORA7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00409
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003754120.1
SIO_010081: LOC114805989
subclass of: SO_0000673
so part of: LOC114805989
location: 1904471..1904608
location: region:1904471-1904608:1
so has part: feature:1904471-1904608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1904471-1904608:1:exon

WASF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1953823..2045299
location: region:1953823-2045299:1
so has part: feature:1953823-2045299:1:exon
subclass of: SO_0000010

100089353
type: Gene
SIO_000068: ncbigene

position:1953823:1
position: 1953823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045299:1
position: 2045299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953823-2045299:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_001516803.5
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1953823..1953950,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037858)
location: region:1953823-2037858:1
so has part: feature:1953823-1953950:1:exon
so has part: feature:1980004-1980086:1:exon
so has part: feature:1983450-1983526:1:exon
so has part: feature:1989213-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2013018:1:exon
so has part: feature:2013999-2014095:1:exon
so has part: feature:2016062-2016162:1:exon
so has part: feature:2018114-2018189:1:exon
so has part: feature:2033686-2033756:1:exon
so has part: feature:2035787-2035887:1:exon
so has part: feature:2037650-2037858:1:exon

position:2037858:1
position: 2037858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953823-1953950:1:exon

position:1953950:1
position: 1953950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1980004-1980086:1:exon

position:1980004:1
position: 1980004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980086:1
position: 1980086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1983450-1983526:1:exon

position:1983450:1
position: 1983450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983526:1
position: 1983526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1989213-1989355:1:exon

position:1989213:1
position: 1989213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989355:1
position: 1989355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1993344-1993478:1:exon

position:1993344:1
position: 1993344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993478:1
position: 1993478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1995960-1996113:1:exon

position:1995960:1
position: 1995960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996113:1
position: 1996113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1999842-1999959:1:exon

position:1999842:1
position: 1999842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999959:1
position: 1999959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2002856-2003031:1:exon

position:2002856:1
position: 2002856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003031:1
position: 2003031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2007715-2007978:1:exon

position:2007715:1
position: 2007715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2007978:1
position: 2007978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2008772-2009139:1:exon

position:2008772:1
position: 2008772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009139:1
position: 2009139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2011462-2013018:1:exon

position:2011462:1
position: 2011462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2013018:1
position: 2013018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2013999-2014095:1:exon

position:2013999:1
position: 2013999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014095:1
position: 2014095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2016062-2016162:1:exon

position:2016062:1
position: 2016062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2016162:1
position: 2016162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2018114-2018189:1:exon

position:2018114:1
position: 2018114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018189:1
position: 2018189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2033686-2033756:1:exon

position:2033686:1
position: 2033686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033756:1
position: 2033756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2035787-2035887:1:exon

position:2035787:1
position: 2035787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035887:1
position: 2035887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2037650-2037858:1:exon

position:2037650:1
position: 2037650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039915007.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1962307..1962624,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2006728..2006894,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037858)
location: region:1962307-2037858:1
so has part: feature:1962307-1962624:1:exon
so has part: feature:1980004-1980086:1:exon
so has part: feature:1983450-1983526:1:exon
so has part: feature:1989213-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2006728-2006894:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2013018:1:exon
so has part: feature:2013999-2014095:1:exon
so has part: feature:2016062-2016162:1:exon
so has part: feature:2018114-2018189:1:exon
so has part: feature:2033686-2033756:1:exon
so has part: feature:2035787-2035887:1:exon
so has part: feature:2037650-2037858:1:exon

position:1962307:1
position: 1962307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962307-1962624:1:exon

position:1962624:1
position: 1962624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1980004-1980086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983450-1983526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989213-1989355:1:exon

urn:…
SIO_000300: 5
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reference: sequence
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WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029047907.2
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1962308..1962624,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037805,2044907..2045299)
location: region:1962308-2045299:1
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urn:…
SIO_000300: 18
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position:2044907:1
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reference: sequence
type: ForwardStrandPosition
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WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029047909.2
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1962308..1962624,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037805,2039872..2041654)
location: region:1962308-2041654:1
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position:2041654:1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:1962308-1962624:1:exon

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SIO_000300: 2
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SIO_000300: 3
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position:2039872:1
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reference: sequence
type: ForwardStrandPosition
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WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029047906.2
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1962308..1962624,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037858)
location: region:1962308-2037858:1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 12
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WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029047913.2
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1962308..1962624,1980004..1980086,1983450..1983526,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2012078,2012929..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037858)
location: region:1962308-2037858:1
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SIO_000300: 12
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reference: sequence
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SIO_000300: 18
SIO_000628: feature:2037650-2037858:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039915005.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:1962308-1962624:1:exon

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SIO_000300: 2
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SIO_000300: 12
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reference: sequence
type: ForwardStrandPosition
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WASF3
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subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029047908.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
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location: region:1974054-2037858:1
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urn:…
SIO_000300: 12
SIO_000628: feature:2013999-2014095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2016062-2016162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2018114-2018189:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2033686-2033756:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2035787-2035887:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2037650-2037858:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: WASF3
product: WASP family member 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039915006.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1983627..1984597,1989213..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2013018,2013999..2014095,2016062..2016162,2018114..2018189,2033686..2033756,2035787..2035887,2037650..2037858)
location: region:1983627-2037858:1
so has part: feature:1983627-1984597:1:exon
so has part: feature:1989213-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2013018:1:exon
so has part: feature:2013999-2014095:1:exon
so has part: feature:2016062-2016162:1:exon
so has part: feature:2018114-2018189:1:exon
so has part: feature:2033686-2033756:1:exon
so has part: feature:2035787-2035887:1:exon
so has part: feature:2037650-2037858:1:exon

position:1983627:1
position: 1983627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983627-1984597:1:exon

position:1984597:1
position: 1984597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1989213-1989355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2011462-2013018:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2013999-2014095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2016062-2016162:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2018114-2018189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2033686-2033756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2035787-2035887:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2037650-2037858:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_028903739.1
type: Protein
SIO_000068: ncbiprotein

position:1989223:1
position: 1989223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011619:1
position: 2011619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_028903740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_028903741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_028903742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_028903746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_039770939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_039770940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVFHGASSEGSLSPDTRSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2002856..2003031,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2002856-2003031:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_001516853.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002856-2003031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X2
translation: MPLVKRNIEPRHLCRGTLPEGITSELECVTNTTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTIQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKREKHKVNPSRNLPVNVRKVRTRKEEWERRKMGIEFMSDAKNLEQAGNRNEDRMPKGSHASDITDYSYPATPNHAVHQQPATPSYVTGDAQQFGGGSQGPEHEHRPPSAPARHPTLNRPQQPPPPPPQAVDGAHGSGPLGPTDYGRHPAQMVDFYNPSGPPPPPPPVIPSAQTAFVSPLQIPMAPFHPAGAAGLTYTAPPHPPSAGLVVSAPPPPGPPPPPPGPPAVGASLSSSPMHGPPATEPKPLGSAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSELDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(1989223..1989355,1993344..1993478,1995960..1996113,1999842..1999959,2006728..2006894,2007715..2007978,2008772..2009139,2011462..2011619)
location: region:1989223-2011619:1
so has part: feature:1989223-1989355:1:exon
so has part: feature:1993344-1993478:1:exon
so has part: feature:1995960-1996113:1:exon
so has part: feature:1999842-1999959:1:exon
so has part: feature:2006728-2006894:1:exon
so has part: feature:2007715-2007978:1:exon
so has part: feature:2008772-2009139:1:exon
so has part: feature:2011462-2011619:1:exon

XP_039770941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989223-1989355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993344-1993478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995960-1996113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999842-1999959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2006728-2006894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007715-2007978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2008772-2009139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2011462-2011619:1:exon

GPR12
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GPR12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2045828..2049953)
location: region:2045828-2049953:-1
so has part: feature:2045828-2049953:-1:exon
subclass of: SO_0000010

100681067
type: Gene
SIO_000068: ncbigene

position:2045828:-1
position: 2045828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2049953:-1
position: 2049953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045828-2049953:-1:exon

GPR12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GPR12
product: G protein-coupled receptor 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029048587.2
SIO_010081: GPR12
subclass of: SO_0000673
so part of: GPR12
location: complement(join(2045828..2048401,2049782..2049953))
location: region:2045828-2049953:-1
so has part: feature:2049782-2049953:-1:exon
so has part: feature:2045828-2048401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2049782-2049953:-1:exon

position:2049782:-1
position: 2049782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045828-2048401:-1:exon

position:2048401:-1
position: 2048401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GPR12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 12
translation: MNADPRANSSWRPGAGPENASAAASAQSPVVEAGPGPAVNPWDVVLCTSGTLISCENAVVVLVICHNPGLRAPMFLLIGSLALADLLAGLGLVGHFASAYLLRSEATTLVTVGLIVASFSASVCSLLAITVDRYLSLYYALTYNSERTVTFTYAMLVLLWGASVGLGLLPVLGWNCLRDESTCSVIRPLTKNHAAVLSVSFLLLFALMLQLYIQICKIVVRHAHQIAVQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLVADSTYPSMYTYATLLPATYNSVINPVIYAFRNQEIQKALWLACCGCVPAGLAQRARSPSDV
SIO_010081: GPR12
subclass of: SO_0000673
so part of: GPR12
location: complement(2047245..2048234)
location: region:2047245-2048234:-1
so has part: feature:2047245-2048234:-1:exon

XP_028904420.1
type: Protein
SIO_000068: ncbiprotein

position:2047245:-1
position: 2047245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2048234:-1
position: 2048234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047245-2048234:-1:exon

LOC120639041
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC120639041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2050129..2108568
location: region:2050129-2108568:1
so has part: feature:2050129-2108568:1:exon
subclass of: SO_0000011

120639041
type: Gene
SIO_000068: ncbigene

position:2050129:1
position: 2050129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108568:1
position: 2108568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050129-2108568:1:exon

LOC120639041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC120639041
product: uncharacterized LOC120639041
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005661184.1
SIO_010081: LOC120639041
subclass of: SO_0000673
so part of: LOC120639041
location: join(2050129..2050213,2057227..2057335,2107893..2108568)
location: region:2050129-2108568:1
so has part: feature:2050129-2050213:1:exon
so has part: feature:2057227-2057335:1:exon
so has part: feature:2107893-2108568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2050129-2050213:1:exon

position:2050213:1
position: 2050213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057227-2057335:1:exon

position:2057227:1
position: 2057227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057335:1
position: 2057335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2107893-2108568:1:exon

position:2107893:1
position: 2107893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114805923
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2112464..2115481
location: region:2112464-2115481:1
so has part: feature:2112464-2115481:1:exon
subclass of: SO_0000011

114805923
type: Gene
SIO_000068: ncbigene

position:2112464:1
position: 2112464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115481:1
position: 2115481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112464-2115481:1:exon

LOC114805923
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805923
product: uncharacterized LOC114805923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_003754053.1
SIO_010081: LOC114805923
subclass of: SO_0000673
so part of: LOC114805923
location: join(2112464..2114907,2115221..2115481)
location: region:2112464-2115481:1
so has part: feature:2112464-2114907:1:exon
so has part: feature:2115221-2115481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2112464-2114907:1:exon

position:2114907:1
position: 2114907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2115221-2115481:1:exon

position:2115221:1
position: 2115221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP12
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2115974..2145487)
location: region:2115974-2145487:-1
so has part: feature:2115974-2145487:-1:exon
subclass of: SO_0000010

100090259
type: Gene
SIO_000068: ncbigene

position:2115974:-1
position: 2115974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145487:-1
position: 2145487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2115974-2145487:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: USP12
product: ubiquitin specific peptidase 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_029048499.2
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2115974..2116361,2116600..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145483))
location: region:2115974-2145483:-1
so has part: feature:2145364-2145483:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116600-2116678:-1:exon
so has part: feature:2115974-2116361:-1:exon

position:2145483:-1
position: 2145483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145483:-1:exon

position:2145364:-1
position: 2145364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

position:2129425:-1
position: 2129425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129505:-1
position: 2129505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

position:2125220:-1
position: 2125220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125433:-1
position: 2125433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

position:2121957:-1
position: 2121957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122186:-1
position: 2122186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

position:2120304:-1
position: 2120304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120380:-1
position: 2120380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

position:2119878:-1
position: 2119878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119961:-1
position: 2119961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

position:2118367:-1
position: 2118367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118564:-1
position: 2118564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2116600-2116678:-1:exon

position:2116600:-1
position: 2116600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2116678:-1
position: 2116678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2115974-2116361:-1:exon

position:2116361:-1
position: 2116361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12 isoform X3
translation: MEILMTVSKLASVCTMGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRD
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116260..2116361,2116600..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145411))
location: region:2116260-2145411:-1
so has part: feature:2145364-2145411:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116600-2116678:-1:exon
so has part: feature:2116260-2116361:-1:exon

XP_028904332.1
type: Protein
SIO_000068: ncbiprotein

position:2116260:-1
position: 2116260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145411:-1
position: 2145411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2116600-2116678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2116260-2116361:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: USP12
product: ubiquitin specific peptidase 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039914941.1
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116271..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2145364..2145487))
location: region:2116271-2145487:-1
so has part: feature:2145364-2145487:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116271-2116678:-1:exon

position:2116271:-1
position: 2116271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2116271-2116678:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: USP12
product: ubiquitin specific peptidase 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_029048498.2
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116271..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145486))
location: region:2116271-2145486:-1
so has part: feature:2145364-2145486:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116271-2116678:-1:exon

position:2145486:-1
position: 2145486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2116271-2116678:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: USP12
product: ubiquitin specific peptidase 12, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_029048500.2
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116271..2116506,2116600..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145485))
location: region:2116271-2145485:-1
so has part: feature:2145364-2145485:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116600-2116678:-1:exon
so has part: feature:2116271-2116506:-1:exon

position:2145485:-1
position: 2145485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2116600-2116678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2116271-2116506:-1:exon

position:2116506:-1
position: 2116506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12 isoform X2
translation: MEILMTVSKLASVCTMFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEVSNRPLSSPRPFQPRENRSQRIARWPSLTLKLLPRRALSLRPMTKRPAFSVPRPPRPLPVA
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116414..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2145364..2145411))
location: region:2116414-2145411:-1
so has part: feature:2145364-2145411:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116414-2116678:-1:exon

XP_039770875.1
type: Protein
SIO_000068: ncbiprotein

position:2116414:-1
position: 2116414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2116414-2116678:-1:exon

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12 isoform X4
translation: MEILMTVSKLASVCTMGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVELLPRRALSLRPMTKRPAFSVPRPPRPLPVA
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116414..2116506,2116600..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145411))
location: region:2116414-2145411:-1
so has part: feature:2145364-2145411:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116600-2116678:-1:exon
so has part: feature:2116414-2116506:-1:exon

XP_028904333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2116600-2116678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2116414-2116506:-1:exon

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12 isoform X1
translation: MEILMTVSKLASVCTMGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEVSNRPLSSPRPFQPRENRSQRIARWPSLTLKLLPRRALSLRPMTKRPAFSVPRPPRPLPVA
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(2116414..2116678,2118367..2118564,2119878..2119961,2120304..2120380,2121957..2122186,2125220..2125433,2129425..2129505,2145364..2145411))
location: region:2116414-2145411:-1
so has part: feature:2145364-2145411:-1:exon
so has part: feature:2129425-2129505:-1:exon
so has part: feature:2125220-2125433:-1:exon
so has part: feature:2121957-2122186:-1:exon
so has part: feature:2120304-2120380:-1:exon
so has part: feature:2119878-2119961:-1:exon
so has part: feature:2118367-2118564:-1:exon
so has part: feature:2116414-2116678:-1:exon

XP_028904331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145364-2145411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2129425-2129505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125220-2125433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121957-2122186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120304-2120380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2119878-2119961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2118367-2118564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2116414-2116678:-1:exon

LOC114805922
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2118525..2132146
location: region:2118525-2132146:1
so has part: feature:2118525-2132146:1:exon
subclass of: SO_0000011

114805922
type: Gene
SIO_000068: ncbigene

position:2118525:1
position: 2118525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132146:1
position: 2132146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118525-2132146:1:exon

LOC114805922
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805922
product: uncharacterized LOC114805922, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003754052.1
SIO_010081: LOC114805922
subclass of: SO_0000673
so part of: LOC114805922
location: join(2118525..2118609,2119239..2119321,2131688..2131885,2131978..2132146)
location: region:2118525-2132146:1
so has part: feature:2118525-2118609:1:exon
so has part: feature:2119239-2119321:1:exon
so has part: feature:2131688-2131885:1:exon
so has part: feature:2131978-2132146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2118525-2118609:1:exon

position:2118609:1
position: 2118609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2119239-2119321:1:exon

position:2119239:1
position: 2119239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119321:1
position: 2119321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2131688-2131885:1:exon

position:2131688:1
position: 2131688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131885:1
position: 2131885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2131978-2132146:1:exon

position:2131978:1
position: 2131978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114805922
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805922
product: uncharacterized LOC114805922, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_003754051.1
SIO_010081: LOC114805922
subclass of: SO_0000673
so part of: LOC114805922
location: join(2118526..2118609,2131688..2131885,2131978..2132146)
location: region:2118526-2132146:1
so has part: feature:2118526-2118609:1:exon
so has part: feature:2131688-2131885:1:exon
so has part: feature:2131978-2132146:1:exon

position:2118526:1
position: 2118526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118526-2118609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2131688-2131885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2131978-2132146:1:exon

MIR1373
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
alternative label: oan-mir-1373
gene: MIR1373
gene synonym: oan-mir-1373
note: microRNA mir-1373; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(2118904..2118978)
location: region:2118904-2118978:-1
so has part: feature:2118904-2118978:-1:exon
subclass of: SO_0000571

100314522
type: Gene
SIO_000068: ncbigene

MI0006820
type: miRBase
SIO_000068: mirbase

position:2118904:-1
position: 2118904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118978:-1
position: 2118978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118904-2118978:-1:exon

MIR1373
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9258
alternative label: oan-mir-1373
gene: MIR1373
gene synonym: oan-mir-1373
product: microRNA mir-1373
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_034778.1
SIO_010081: MIR1373
subclass of: SO_0000673
so part of: MIR1373
location: complement(2118904..2118978)
location: region:2118904-2118978:-1
so has part: feature:2118904-2118978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2118904-2118978:-1:exon

MIR1373
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
alternative label: oan-mir-1373
nc RNA class: miRNA
gene: MIR1373
gene synonym: oan-mir-1373
product: oan-miR-1373
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1373
subclass of: SO_0000673
so part of: MIR1373
location: complement(2118942..2118963)
location: region:2118942-2118963:-1
so has part: feature:2118942-2118963:-1:exon

MIMAT0007054
type: miRBase
SIO_000068: mirbase

position:2118942:-1
position: 2118942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118963:-1
position: 2118963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118942-2118963:-1:exon

RPL21
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2156807..2162064
location: region:2156807-2162064:1
so has part: feature:2156807-2162064:1:exon
subclass of: SO_0000010

100089361
type: Gene
SIO_000068: ncbigene

position:2156807:1
position: 2156807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162064:1
position: 2162064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156807-2162064:1:exon

RPL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: RPL21
product: ribosomal protein L21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_029048562.2
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(2156807..2156839,2159278..2159356,2159716..2159777,2160456..2160568,2160988..2161138,2161937..2162064)
location: region:2156807-2162064:1
so has part: feature:2156807-2156839:1:exon
so has part: feature:2159278-2159356:1:exon
so has part: feature:2159716-2159777:1:exon
so has part: feature:2160456-2160568:1:exon
so has part: feature:2160988-2161138:1:exon
so has part: feature:2161937-2162064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2156807-2156839:1:exon

position:2156839:1
position: 2156839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2159278-2159356:1:exon

position:2159278:1
position: 2159278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159356:1
position: 2159356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2159716-2159777:1:exon

position:2159716:1
position: 2159716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159777:1
position: 2159777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2160456-2160568:1:exon

position:2160456:1
position: 2160456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160568:1
position: 2160568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2160988-2161138:1:exon

position:2160988:1
position: 2160988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161138:1
position: 2161138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2161937-2162064:1:exon

position:2161937:1
position: 2161937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L21
translation: MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQQGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKRKGIWVELKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(2159290..2159356,2159716..2159777,2160456..2160568,2160988..2161138,2161937..2162026)
location: region:2159290-2162026:1
so has part: feature:2159290-2159356:1:exon
so has part: feature:2159716-2159777:1:exon
so has part: feature:2160456-2160568:1:exon
so has part: feature:2160988-2161138:1:exon
so has part: feature:2161937-2162026:1:exon

XP_028904395.1
type: Protein
SIO_000068: ncbiprotein

position:2159290:1
position: 2159290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162026:1
position: 2162026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2159290-2159356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2159716-2159777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160456-2160568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2160988-2161138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2161937-2162026:1:exon

LOC114805995
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805995
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2160273..2160351
location: region:2160273-2160351:1
so has part: feature:2160273-2160351:1:exon
subclass of: SO_0000578

114805995
type: Gene
SIO_000068: ncbigene

position:2160273:1
position: 2160273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160351:1
position: 2160351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160273-2160351:1:exon

LOC114805995
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: snoRNA
gene: LOC114805995
product: small nucleolar RNA SNORD102
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00187
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003754126.1
SIO_010081: LOC114805995
subclass of: SO_0000673
so part of: LOC114805995
location: 2160273..2160351
location: region:2160273-2160351:1
so has part: feature:2160273-2160351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160273-2160351:1:exon

LOC114805944
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805944
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2160620..2160751
location: region:2160620-2160751:1
so has part: feature:2160620-2160751:1:exon
subclass of: SO_0000578

114805944
type: Gene
SIO_000068: ncbigene

position:2160620:1
position: 2160620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160751:1
position: 2160751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160620-2160751:1:exon

LOC114805944
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: snoRNA
gene: LOC114805944
product: small nucleolar RNA SNORA27
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00443
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003754076.1
SIO_010081: LOC114805944
subclass of: SO_0000673
so part of: LOC114805944
location: 2160620..2160751
location: region:2160620-2160751:1
so has part: feature:2160620-2160751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160620-2160751:1:exon

MIR1417
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
alternative label: oan-mir-1417
gene: MIR1417
gene synonym: oan-mir-1417
note: microRNA mir-1417; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 2161761..2161900
location: region:2161761-2161900:1
so has part: feature:2161761-2161900:1:exon
subclass of: SO_0000571

100314593
type: Gene
SIO_000068: ncbigene

MI0006957
type: miRBase
SIO_000068: mirbase

position:2161761:1
position: 2161761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161900:1
position: 2161900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161761-2161900:1:exon

MIR1417
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9258
alternative label: oan-mir-1417
gene: MIR1417
gene synonym: oan-mir-1417
product: microRNA mir-1417
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_034913.1
SIO_010081: MIR1417
subclass of: SO_0000673
so part of: MIR1417
location: 2161761..2161900
location: region:2161761-2161900:1
so has part: feature:2161761-2161900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2161761-2161900:1:exon

MIR1417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
alternative label: oan-mir-1417
nc RNA class: miRNA
gene: MIR1417
gene synonym: oan-mir-1417
product: oan-miR-1417-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1417
subclass of: SO_0000673
so part of: MIR1417
location: 2161781..2161798
location: region:2161781-2161798:1
so has part: feature:2161781-2161798:1:exon

MIMAT0007274
type: miRBase
SIO_000068: mirbase

position:2161781:1
position: 2161781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161798:1
position: 2161798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161781-2161798:1:exon

MIR1417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
alternative label: oan-mir-1417
nc RNA class: miRNA
gene: MIR1417
gene synonym: oan-mir-1417
product: oan-miR-1417-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1417
subclass of: SO_0000673
so part of: MIR1417
location: 2161838..2161858
location: region:2161838-2161858:1
so has part: feature:2161838-2161858:1:exon

MIMAT0007275
type: miRBase
SIO_000068: mirbase

position:2161838:1
position: 2161838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161858:1
position: 2161858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161838-2161858:1:exon

RASL11A
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: RASL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2168844..2172901
location: region:2168844-2172901:1
so has part: feature:2168844-2172901:1:exon
subclass of: SO_0000010

114805814
type: Gene
SIO_000068: ncbigene

position:2168844:1
position: 2168844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172901:1
position: 2172901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2168844-2172901:1:exon