Ornithorhynchus anatinus isolate Pmale09 chromosome 19, mOrnAna1.pri.v4, whole genome shotgun sequence.
type: Entry
definition: Ornithorhynchus anatinus isolate Pmale09 chromosome 19, mOrnAna1.pri.v4, whole genome shotgun sequence.
sequence version: NC_041746.1
sequence date: 2021-03-08
sequence: sequence
division: CON
label: NC_041746.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA534073
dblink: SAMN08537700
keyword: WGS
keyword: RefSeq
source: Ornithorhynchus anatinus (platypus)
organism: Ornithorhynchus anatinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM014218.1.\nAssembly name: mOrnAna1.pri.v4\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/11/06. The original whole-genome shotgun project has the\naccession RZJT00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-DEC-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON Unzip v. 1.0.2;\n purge_haplotigs v. bit 7.10.2018;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n fillingt v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0; gEVAL\n manual curation v. 2019-12-06\nAssembly Name :: mOrnAna1.pri.v4\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.8x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Dovetail Genomics\n HiC; Arima Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ornithorhynchus anatinus Annotation\n Release 105\nAnnotation Version :: 105\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 35120541
topology: linear
so has quality: SO_0000987
location: 1..35120541
location: region:1-35120541:1
RO_0002162: 9258

NC_041746
type: RefSeq
SIO_000068: refseq

PRJNA534073
type: BioProject
SIO_000068: bioproject

SAMN08537700
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35120541:1
position: 35120541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35120541:1:source
so part of: sequence
organism: Ornithorhynchus anatinus
mol type: genomic DNA
isolate: Pmale09
chromosome: 19
sex: male
tissue type: liver; muscle

9258
type: Taxonomy
SIO_000068: taxonomy

LOC114805716
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130130..133798)
location: region:130130-133798:-1
so has part: feature:130130-133798:-1:exon
subclass of: SO_0000011

114805716
type: Gene
SIO_000068: ncbigene

position:130130:-1
position: 130130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133798:-1
position: 133798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130130-133798:-1:exon

LOC114805716
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805716
product: uncharacterized LOC114805716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003753738.2
SIO_010081: LOC114805716
subclass of: SO_0000673
so part of: LOC114805716
location: complement(join(130130..130698,131638..131943,133627..133798))
location: region:130130-133798:-1
so has part: feature:133627-133798:-1:exon
so has part: feature:131638-131943:-1:exon
so has part: feature:130130-130698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133627-133798:-1:exon

position:133627:-1
position: 133627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131638-131943:-1:exon

position:131638:-1
position: 131638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131943:-1
position: 131943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130130-130698:-1:exon

position:130698:-1
position: 130698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: DLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(154731..166118)
location: region:154731-166118:-1
so has part: feature:154731-166118:-1:exon
subclass of: SO_0000010

100088465
type: Gene
SIO_000068: ncbigene

position:154731:-1
position: 154731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166118:-1
position: 166118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154731-166118:-1:exon

DLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: DLL1
product: delta like canonical Notch ligand 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029046866.2
SIO_010081: DLL1
subclass of: SO_0000673
so part of: DLL1
location: complement(join(154731..155744,155874..155991,156712..157489,158950..159166,159287..159456,159942..160072,160429..160489,162238..162495,163458..163518,164650..164988,165345..166118))
location: region:154731-166118:-1
so has part: feature:165345-166118:-1:exon
so has part: feature:164650-164988:-1:exon
so has part: feature:163458-163518:-1:exon
so has part: feature:162238-162495:-1:exon
so has part: feature:160429-160489:-1:exon
so has part: feature:159942-160072:-1:exon
so has part: feature:159287-159456:-1:exon
so has part: feature:158950-159166:-1:exon
so has part: feature:156712-157489:-1:exon
so has part: feature:155874-155991:-1:exon
so has part: feature:154731-155744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165345-166118:-1:exon

position:165345:-1
position: 165345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164650-164988:-1:exon

position:164650:-1
position: 164650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164988:-1
position: 164988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163458-163518:-1:exon

position:163458:-1
position: 163458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163518:-1
position: 163518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162238-162495:-1:exon

position:162238:-1
position: 162238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162495:-1
position: 162495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160429-160489:-1:exon

position:160429:-1
position: 160429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160489:-1
position: 160489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159942-160072:-1:exon

position:159942:-1
position: 159942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160072:-1
position: 160072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159287-159456:-1:exon

position:159287:-1
position: 159287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159456:-1
position: 159456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158950-159166:-1:exon

position:158950:-1
position: 158950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159166:-1
position: 159166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:156712-157489:-1:exon

position:156712:-1
position: 156712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157489:-1
position: 157489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:155874-155991:-1:exon

position:155874:-1
position: 155874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155991:-1
position: 155991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154731-155744:-1:exon

position:155744:-1
position: 155744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: DLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-like protein 1
translation: MGPPSTLTLVVVTALLPQVCGSGVFELRLQEFVNNKGLPGNRNCCGGAPAPPAPPAAPPAPGLQLHCDCKTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGANSFSVPDGARGKDPAFTNPIRFPFGFTWPGTFSLIIEALHTDSPDDLTTENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCDEHYYGDGCSVFCRPRDDAFGHFTCGERGEKVCDPGWKGQYCTEPICLPGCNEQHGFCDKPGECKCRVGWQGRYCDECIRYPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHRPCQNGATCTNTGQGSYTCSCRPGYNGANCEMEINECDVGPCKNGGSCTDLENSYSCTCPPGFYGKNCELSAMTCADGPCFNGGRCSDNPDGGYLCHCPLGYSGFNCEKKIDHCSSSPCSNGARCVDLGSSYLCQCQAGFTGTHCDDNTDDCASSPCANGGTCQDGVNDYSCTCPPGYTGKNCSAPVSRCEHGPCHNGATCHERNRRYVCQCARGYGGLNCQFLLPEPAPGPGPVDLSQKHTEGRGGPFPWVAVGAGVVLVLALLLGCAAAVVCVRLRLQKRRPPAGPVRGETETMNNLANCQREKDISVSVIGATQIKNTNKKAELHGESKPPPNGFKARYPAVDYNLVPDLKSAERGGEDLGKAPTPEAPERTPAPLKSGDGSERKRPESVYSTSKDTKYQSVYVISEEKDECIIATEV
SIO_010081: DLL1
subclass of: SO_0000673
so part of: DLL1
location: complement(join(155739..155744,155874..155991,156712..157489,158950..159166,159287..159456,159942..160072,160429..160489,162238..162495,163458..163518,164650..164988,165345..165398))
location: region:155739-165398:-1
so has part: feature:165345-165398:-1:exon
so has part: feature:164650-164988:-1:exon
so has part: feature:163458-163518:-1:exon
so has part: feature:162238-162495:-1:exon
so has part: feature:160429-160489:-1:exon
so has part: feature:159942-160072:-1:exon
so has part: feature:159287-159456:-1:exon
so has part: feature:158950-159166:-1:exon
so has part: feature:156712-157489:-1:exon
so has part: feature:155874-155991:-1:exon
so has part: feature:155739-155744:-1:exon

XP_028902699.1
type: Protein
SIO_000068: ncbiprotein

position:155739:-1
position: 155739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165398:-1
position: 165398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165345-165398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164650-164988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163458-163518:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162238-162495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160429-160489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159942-160072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159287-159456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158950-159166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156712-157489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155874-155991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155739-155744:-1:exon

FAM120B
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184823..255603
location: region:184823-255603:1
so has part: feature:184823-255603:1:exon
subclass of: SO_0000010

100093011
type: Gene
SIO_000068: ncbigene

position:184823:1
position: 184823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255603:1
position: 255603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184823-255603:1:exon

FAM120B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: FAM120B
product: family with sequence similarity 120B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029047353.2
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: join(184823..184875,192076..193130,195110..195290,204890..204991,212186..212367,216868..216960,237692..237898,239867..239975,241055..241195,249477..249537,253618..255603)
location: region:184823-255603:1
so has part: feature:184823-184875:1:exon
so has part: feature:192076-193130:1:exon
so has part: feature:195110-195290:1:exon
so has part: feature:204890-204991:1:exon
so has part: feature:212186-212367:1:exon
so has part: feature:216868-216960:1:exon
so has part: feature:237692-237898:1:exon
so has part: feature:239867-239975:1:exon
so has part: feature:241055-241195:1:exon
so has part: feature:249477-249537:1:exon
so has part: feature:253618-255603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184823-184875:1:exon

position:184875:1
position: 184875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192076-193130:1:exon

position:192076:1
position: 192076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193130:1
position: 193130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195110-195290:1:exon

position:195110:1
position: 195110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195290:1
position: 195290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204890-204991:1:exon

position:204890:1
position: 204890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204991:1
position: 204991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212186-212367:1:exon

position:212186:1
position: 212186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212367:1
position: 212367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216868-216960:1:exon

position:216868:1
position: 216868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216960:1
position: 216960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237692-237898:1:exon

position:237692:1
position: 237692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237898:1
position: 237898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:239867-239975:1:exon

position:239867:1
position: 239867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239975:1
position: 239975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:241055-241195:1:exon

position:241055:1
position: 241055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241195:1
position: 241195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:249477-249537:1:exon

position:249477:1
position: 249477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249537:1
position: 249537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:253618-255603:1:exon

position:253618:1
position: 253618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM120B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: FAM120B
product: family with sequence similarity 120B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029047354.2
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: join(184823..184875,192076..193130,195110..195290,204890..204991,212186..212367,216868..216960,237692..237898,239867..239975,241055..241195,249477..249537,253113..253314)
location: region:184823-253314:1
so has part: feature:184823-184875:1:exon
so has part: feature:192076-193130:1:exon
so has part: feature:195110-195290:1:exon
so has part: feature:204890-204991:1:exon
so has part: feature:212186-212367:1:exon
so has part: feature:216868-216960:1:exon
so has part: feature:237692-237898:1:exon
so has part: feature:239867-239975:1:exon
so has part: feature:241055-241195:1:exon
so has part: feature:249477-249537:1:exon
so has part: feature:253113-253314:1:exon

position:253314:1
position: 253314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184823-184875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192076-193130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195110-195290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204890-204991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212186-212367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216868-216960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237692-237898:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239867-239975:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241055-241195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249477-249537:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253113-253314:1:exon

position:253113:1
position: 253113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM120B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of peroxisome proliferator-activated receptor gamma isoform X1
translation: MGVRGLQGFVENACPGARVEVNLRDVAEEYRSNHPGRTPVMVVDALGCLRYWYSPESWVCGGQWREYFSVLRGFVEAFTAAGIKLVFFFDGVVEQTKRNEWVKRRLKNDKEIARIFQAIKRDGQQPGRAMFFLPSGLATFTRFALKSLGQDTLCSIREADYEVAAFGLQNDCLGILGEDTDYLIYSTCPYFSVRNLRLDRLTTVMFSREQLCRRLGLHKTDLPLLACLLGNDTVPEGACAALRERCLAYRSCTAQPAADGRSAAVLAVASFISGVLRGQQGARDLGAMVPSGPDPSLLCRGVESYLLPGQDSPWLLQGPNRATAGAEGGATPCSDPEILQVAKERHVRSESYLVYNVLSCGEAECSNTLEDALDAELPAQALVYRPARQRLYWVMLGAGRDPCEARPAVKEWFVHARNPLRHPELIQPVQPDIPGGTPSLRTLWLLQEPGARAQRYSTFLACFGLPTMAPEAEELQALEGSLAATCCLLSYLLLQVGSLSLEDLNAFIAQTLCLRGKSAVQLADLQLAYVDSRAVHLGSLFIRGLSTLVLANSTCGGPFRMDDLMPWQVFDGKLFQQKYQQSHSGQSPHELLEGNKLWLTEFQHLTSLICKTCNMKNRTVLSRQRGVVFNTGVQERMWESHAQLSWQPHSAPPRHRPDRSLPGRGPLPSPAGSPALHPGRGFRSQERGQRRKRFPFAPCDTPALHCRLTSGGVVLDPKDRNGSGTGGSDGN
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: join(192111..193130,195110..195290,204890..204991,212186..212367,216868..216960,237692..237898,239867..239975,241055..241195,249477..249537,253618..253717)
location: region:192111-253717:1
so has part: feature:192111-193130:1:exon
so has part: feature:195110-195290:1:exon
so has part: feature:204890-204991:1:exon
so has part: feature:212186-212367:1:exon
so has part: feature:216868-216960:1:exon
so has part: feature:237692-237898:1:exon
so has part: feature:239867-239975:1:exon
so has part: feature:241055-241195:1:exon
so has part: feature:249477-249537:1:exon
so has part: feature:253618-253717:1:exon

XP_028903186.1
type: Protein
SIO_000068: ncbiprotein

position:192111:1
position: 192111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253717:1
position: 253717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192111-193130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195110-195290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204890-204991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212186-212367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216868-216960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237692-237898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239867-239975:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241055-241195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249477-249537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253618-253717:1:exon

FAM120B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of peroxisome proliferator-activated receptor gamma isoform X2
translation: MGVRGLQGFVENACPGARVEVNLRDVAEEYRSNHPGRTPVMVVDALGCLRYWYSPESWVCGGQWREYFSVLRGFVEAFTAAGIKLVFFFDGVVEQTKRNEWVKRRLKNDKEIARIFQAIKRDGQQPGRAMFFLPSGLATFTRFALKSLGQDTLCSIREADYEVAAFGLQNDCLGILGEDTDYLIYSTCPYFSVRNLRLDRLTTVMFSREQLCRRLGLHKTDLPLLACLLGNDTVPEGACAALRERCLAYRSCTAQPAADGRSAAVLAVASFISGVLRGQQGARDLGAMVPSGPDPSLLCRGVESYLLPGQDSPWLLQGPNRATAGAEGGATPCSDPEILQVAKERHVRSESYLVYNVLSCGEAECSNTLEDALDAELPAQALVYRPARQRLYWVMLGAGRDPCEARPAVKEWFVHARNPLRHPELIQPVQPDIPGGTPSLRTLWLLQEPGARAQRYSTFLACFGLPTMAPEAEELQALEGSLAATCCLLSYLLLQVGSLSLEDLNAFIAQTLCLRGKSAVQLADLQLAYVDSRAVHLGSLFIRGLSTLVLANSTCGGPFRMDDLMPWQVFDGKLFQQKYQQSHSGQSPHELLEGNKLWLTEFQHLTSLICKTCNMKNRTVLSRQRGVVFNTGVQERMWESHAQLSWQPHSAPPRHRPDRSLPGRGPLPSPAGSPALHPGRGFRSQERGQRRKRFPFAPWHPR
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: join(192111..193130,195110..195290,204890..204991,212186..212367,216868..216960,237692..237898,239867..239975,241055..241195,249477..249537,253113..253125)
location: region:192111-253125:1
so has part: feature:192111-193130:1:exon
so has part: feature:195110-195290:1:exon
so has part: feature:204890-204991:1:exon
so has part: feature:212186-212367:1:exon
so has part: feature:216868-216960:1:exon
so has part: feature:237692-237898:1:exon
so has part: feature:239867-239975:1:exon
so has part: feature:241055-241195:1:exon
so has part: feature:249477-249537:1:exon
so has part: feature:253113-253125:1:exon

XP_028903187.1
type: Protein
SIO_000068: ncbiprotein

position:253125:1
position: 253125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192111-193130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195110-195290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204890-204991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212186-212367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216868-216960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237692-237898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239867-239975:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241055-241195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249477-249537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253113-253125:1:exon

PSMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277518..283399)
location: region:277518-283399:-1
so has part: feature:277518-283399:-1:exon
subclass of: SO_0000010

100082504
type: Gene
SIO_000068: ncbigene

position:277518:-1
position: 277518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283399:-1
position: 283399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277518-283399:-1:exon

PSMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PSMB1
product: proteasome 20S subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_029047675.2
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: complement(join(277518..277823,278542..278648,279236..279365,279530..279611,279811..279918,283090..283279,283313..283399))
location: region:277518-283399:-1
so has part: feature:283313-283399:-1:exon
so has part: feature:283090-283279:-1:exon
so has part: feature:279811-279918:-1:exon
so has part: feature:279530-279611:-1:exon
so has part: feature:279236-279365:-1:exon
so has part: feature:278542-278648:-1:exon
so has part: feature:277518-277823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283313-283399:-1:exon

position:283313:-1
position: 283313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283090-283279:-1:exon

position:283090:-1
position: 283090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283279:-1
position: 283279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279811-279918:-1:exon

position:279811:-1
position: 279811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279918:-1
position: 279918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279530-279611:-1:exon

position:279530:-1
position: 279530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279611:-1
position: 279611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279236-279365:-1:exon

position:279236:-1
position: 279236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279365:-1
position: 279365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278542-278648:-1:exon

position:278542:-1
position: 278542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278648:-1
position: 278648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277518-277823:-1:exon

position:277823:-1
position: 277823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-1
translation: MLSSLSSLSSLSSLSAATFAAFAAPFPELEREAEAEAEAGSLAGPVRLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLGKALQLVKDVFISAAERDVYTGDALKICIVTKDGIQEETISLRRD
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: complement(join(277638..277823,278542..278648,279236..279365,279530..279611,279811..279918,283090..283262))
location: region:277638-283262:-1
so has part: feature:283090-283262:-1:exon
so has part: feature:279811-279918:-1:exon
so has part: feature:279530-279611:-1:exon
so has part: feature:279236-279365:-1:exon
so has part: feature:278542-278648:-1:exon
so has part: feature:277638-277823:-1:exon

XP_028903508.1
type: Protein
SIO_000068: ncbiprotein

position:277638:-1
position: 277638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283262:-1
position: 283262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283090-283262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279811-279918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279530-279611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279236-279365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278542-278648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277638-277823:-1:exon

LOC100091633
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC100091633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 288720..300050
location: region:288720-300050:1
so has part: feature:288720-300050:1:exon
subclass of: SO_0000010

100091633
type: Gene
SIO_000068: ncbigene

position:288720:1
position: 288720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300050:1
position: 300050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288720-300050:1:exon

LOC100091633
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100091633
product: TATA-box binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_029047416.2
SIO_010081: LOC100091633
subclass of: SO_0000673
so part of: LOC100091633
location: join(288720..288841,294461..294669,295570..295919,296790..296877,297885..297976,298512..298679,299331..299425,299548..300050)
location: region:288720-300050:1
so has part: feature:288720-288841:1:exon
so has part: feature:294461-294669:1:exon
so has part: feature:295570-295919:1:exon
so has part: feature:296790-296877:1:exon
so has part: feature:297885-297976:1:exon
so has part: feature:298512-298679:1:exon
so has part: feature:299331-299425:1:exon
so has part: feature:299548-300050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288720-288841:1:exon

position:288841:1
position: 288841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294461-294669:1:exon

position:294461:1
position: 294461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294669:1
position: 294669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295570-295919:1:exon

position:295570:1
position: 295570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295919:1
position: 295919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296790-296877:1:exon

position:296790:1
position: 296790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296877:1
position: 296877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:297885-297976:1:exon

position:297885:1
position: 297885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297976:1
position: 297976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:298512-298679:1:exon

position:298512:1
position: 298512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298679:1
position: 298679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299331-299425:1:exon

position:299331:1
position: 299331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299425:1
position: 299425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:299548-300050:1:exon

position:299548:1
position: 299548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100091633
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100091633
product: TATA-box binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029047417.2
SIO_010081: LOC100091633
subclass of: SO_0000673
so part of: LOC100091633
location: join(289241..289318,294461..294669,295570..295919,296790..296877,297885..297976,298512..298679,299331..299425,299548..300050)
location: region:289241-300050:1
so has part: feature:289241-289318:1:exon
so has part: feature:294461-294669:1:exon
so has part: feature:295570-295919:1:exon
so has part: feature:296790-296877:1:exon
so has part: feature:297885-297976:1:exon
so has part: feature:298512-298679:1:exon
so has part: feature:299331-299425:1:exon
so has part: feature:299548-300050:1:exon

position:289241:1
position: 289241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289241-289318:1:exon

position:289318:1
position: 289318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294461-294669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295570-295919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296790-296877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297885-297976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298512-298679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299331-299425:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299548-300050:1:exon

LOC100091633
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100091633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-box-binding protein
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSSNSLSLLEEQQRQQQQQQQQQQQQQQQAATAQQAPAGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: LOC100091633
subclass of: SO_0000673
so part of: LOC100091633
location: join(294616..294669,295570..295919,296790..296877,297885..297976,298512..298679,299331..299425,299548..299627)
location: region:294616-299627:1
so has part: feature:294616-294669:1:exon
so has part: feature:295570-295919:1:exon
so has part: feature:296790-296877:1:exon
so has part: feature:297885-297976:1:exon
so has part: feature:298512-298679:1:exon
so has part: feature:299331-299425:1:exon
so has part: feature:299548-299627:1:exon

XP_028903249.1
type: Protein
SIO_000068: ncbiprotein

position:294616:1
position: 294616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299627:1
position: 299627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294616-294669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295570-295919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296790-296877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297885-297976:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298512-298679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299331-299425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299548-299627:1:exon

LOC100091633
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100091633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-box-binding protein
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSSNSLSLLEEQQRQQQQQQQQQQQQQQQAATAQQAPAGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: LOC100091633
subclass of: SO_0000673
so part of: LOC100091633
location: join(294616..294669,295570..295919,296790..296877,297885..297976,298512..298679,299331..299425,299548..299627)
location: region:294616-299627:1
so has part: feature:294616-294669:1:exon
so has part: feature:295570-295919:1:exon
so has part: feature:296790-296877:1:exon
so has part: feature:297885-297976:1:exon
so has part: feature:298512-298679:1:exon
so has part: feature:299331-299425:1:exon
so has part: feature:299548-299627:1:exon

XP_028903250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294616-294669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295570-295919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296790-296877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297885-297976:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298512-298679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299331-299425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299548-299627:1:exon

PDCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(299828..304219)
location: region:299828-304219:-1
so has part: feature:299828-304219:-1:exon
subclass of: SO_0000010

100091641
type: Gene
SIO_000068: ncbigene

position:299828:-1
position: 299828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304219:-1
position: 304219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299828-304219:-1:exon

PDCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PDCD2
product: programmed cell death 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029047415.2
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: complement(join(299828..300314,300589..300702,300955..301058,301498..301659,302725..302970,303901..303994,304094..304219))
location: region:299828-304219:-1
so has part: feature:304094-304219:-1:exon
so has part: feature:303901-303994:-1:exon
so has part: feature:302725-302970:-1:exon
so has part: feature:301498-301659:-1:exon
so has part: feature:300955-301058:-1:exon
so has part: feature:300589-300702:-1:exon
so has part: feature:299828-300314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304094-304219:-1:exon

position:304094:-1
position: 304094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303901-303994:-1:exon

position:303901:-1
position: 303901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303994:-1
position: 303994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302725-302970:-1:exon

position:302725:-1
position: 302725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302970:-1
position: 302970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301498-301659:-1:exon

position:301498:-1
position: 301498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301659:-1
position: 301659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300955-301058:-1:exon

position:300955:-1
position: 300955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301058:-1
position: 301058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300589-300702:-1:exon

position:300589:-1
position: 300589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300702:-1
position: 300702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299828-300314:-1:exon

position:300314:-1
position: 300314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2
translation: MGLELGFAEATPGWRLRSGHFPSKLYAPLPDPHHAFHRALFVFACRDPACCLAFRVFRNQLPRKNAFYPYEPPPEEAPPPGAAAAVPSQLGSGVWLCRVCGCPGPKACARCHRAHYCSRHHQTLDWKMGHKQACPLPEDLDGAIPDHQFLFPEYEIVIEAEEPDSDGEGEEDGDVGGVEDSAADPELPGSLGEAPEAALDALAKHESREDRIFQQFKAKTEREPEQILRYGRGVDPLWISGEGIPQEKDIPPCPCGARREFEFQVMPQLLNYLKADRLGTSLDWGVLAVYTCARSCSLATTHYIEEFIWKQDVAGSA
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: complement(join(300153..300314,300589..300702,300955..301058,301498..301659,302725..302970,303901..303994,304094..304165))
location: region:300153-304165:-1
so has part: feature:304094-304165:-1:exon
so has part: feature:303901-303994:-1:exon
so has part: feature:302725-302970:-1:exon
so has part: feature:301498-301659:-1:exon
so has part: feature:300955-301058:-1:exon
so has part: feature:300589-300702:-1:exon
so has part: feature:300153-300314:-1:exon

XP_028903248.1
type: Protein
SIO_000068: ncbiprotein

position:300153:-1
position: 300153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304165:-1
position: 304165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304094-304165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303901-303994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302725-302970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301498-301659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300955-301058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300589-300702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300153-300314:-1:exon

GNPAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(306939..318810)
location: region:306939-318810:-1
so has part: feature:306939-318810:-1:exon
subclass of: SO_0000010

100085042
type: Gene
SIO_000068: ncbigene

position:306939:-1
position: 306939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318810:-1
position: 318810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306939-318810:-1:exon

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_029047518.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(306939..307383,308022..308083,308413..308506,308646..308745,309076..309216,309750..309829,309984..310235,311176..311399,311633..311763,312057..312208,313450..313525,313793..313920,314137..314266,315422..315598,316454..316642,318711..318810))
location: region:306939-318810:-1
so has part: feature:318711-318810:-1:exon
so has part: feature:316454-316642:-1:exon
so has part: feature:315422-315598:-1:exon
so has part: feature:314137-314266:-1:exon
so has part: feature:313793-313920:-1:exon
so has part: feature:313450-313525:-1:exon
so has part: feature:312057-312208:-1:exon
so has part: feature:311633-311763:-1:exon
so has part: feature:311176-311399:-1:exon
so has part: feature:309984-310235:-1:exon
so has part: feature:309750-309829:-1:exon
so has part: feature:309076-309216:-1:exon
so has part: feature:308646-308745:-1:exon
so has part: feature:308413-308506:-1:exon
so has part: feature:308022-308083:-1:exon
so has part: feature:306939-307383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318711-318810:-1:exon

position:318711:-1
position: 318711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316454-316642:-1:exon

position:316454:-1
position: 316454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316642:-1
position: 316642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315422-315598:-1:exon

position:315422:-1
position: 315422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315598:-1
position: 315598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314137-314266:-1:exon

position:314137:-1
position: 314137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314266:-1
position: 314266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313793-313920:-1:exon

position:313793:-1
position: 313793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313920:-1
position: 313920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313450-313525:-1:exon

position:313450:-1
position: 313450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313525:-1
position: 313525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312057-312208:-1:exon

position:312057:-1
position: 312057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312208:-1
position: 312208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311633-311763:-1:exon

position:311633:-1
position: 311633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311763:-1
position: 311763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:311176-311399:-1:exon

position:311176:-1
position: 311176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311399:-1
position: 311399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:309984-310235:-1:exon

position:309984:-1
position: 309984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310235:-1
position: 310235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:309750-309829:-1:exon

position:309750:-1
position: 309750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309829:-1
position: 309829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309076-309216:-1:exon

position:309076:-1
position: 309076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309216:-1
position: 309216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:308646-308745:-1:exon

position:308646:-1
position: 308646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308745:-1
position: 308745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:308413-308506:-1:exon

position:308413:-1
position: 308413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308506:-1
position: 308506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:308022-308083:-1:exon

position:308022:-1
position: 308022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308083:-1
position: 308083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:306939-307383:-1:exon

position:307383:-1
position: 307383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNPAT
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9258
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_003753727.2
SIO_010081: GNPAT
so part of: GNPAT
location: complement(join(306939..307383,308022..308083,308413..308506,308646..308741,309076..309216,309750..309829,309984..310235,311176..311399,311633..311763,312057..312208,313450..313525,313793..313920,314137..314266,315422..315598,316454..316645,318711..318790))
location: region:306939-318790:-1
so has part: feature:318711-318790:-1:exon
so has part: feature:316454-316645:-1:exon
so has part: feature:315422-315598:-1:exon
so has part: feature:314137-314266:-1:exon
so has part: feature:313793-313920:-1:exon
so has part: feature:313450-313525:-1:exon
so has part: feature:312057-312208:-1:exon
so has part: feature:311633-311763:-1:exon
so has part: feature:311176-311399:-1:exon
so has part: feature:309984-310235:-1:exon
so has part: feature:309750-309829:-1:exon
so has part: feature:309076-309216:-1:exon
so has part: feature:308646-308741:-1:exon
so has part: feature:308413-308506:-1:exon
so has part: feature:308022-308083:-1:exon
so has part: feature:306939-307383:-1:exon

position:318790:-1
position: 318790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318711-318790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316454-316645:-1:exon

position:316645:-1
position: 316645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315422-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314137-314266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313793-313920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313450-313525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312057-312208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311633-311763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311176-311399:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309984-310235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309750-309829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309076-309216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:308646-308741:-1:exon

position:308741:-1
position: 308741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:308413-308506:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308022-308083:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:306939-307383:-1:exon

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_029047517.2
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(306939..307383,308022..308083,308413..308506,308646..308745,309076..309216,309750..309829,309984..310235,311176..311399,311633..311763,312057..312208,313450..313525,313793..313920,314137..314266,315422..315598,316454..316645,318711..318788))
location: region:306939-318788:-1
so has part: feature:318711-318788:-1:exon
so has part: feature:316454-316645:-1:exon
so has part: feature:315422-315598:-1:exon
so has part: feature:314137-314266:-1:exon
so has part: feature:313793-313920:-1:exon
so has part: feature:313450-313525:-1:exon
so has part: feature:312057-312208:-1:exon
so has part: feature:311633-311763:-1:exon
so has part: feature:311176-311399:-1:exon
so has part: feature:309984-310235:-1:exon
so has part: feature:309750-309829:-1:exon
so has part: feature:309076-309216:-1:exon
so has part: feature:308646-308745:-1:exon
so has part: feature:308413-308506:-1:exon
so has part: feature:308022-308083:-1:exon
so has part: feature:306939-307383:-1:exon

position:318788:-1
position: 318788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318711-318788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316454-316645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315422-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314137-314266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313793-313920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313450-313525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312057-312208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311633-311763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311176-311399:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309984-310235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309750-309829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309076-309216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:308646-308745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:308413-308506:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308022-308083:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:306939-307383:-1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X2
translation: MAASGTSASSLRSKDGGSKRWEEFEDMLEERRQSSDLRYALKCYAPVLYKGLNPCKPWAIKTAVLRAEEVQYVVKQLSRETGQSVQSIQETAAQILEEMGHSLRLGAIRLFAFSLSKIFKCLFRKVCVNQDGIQRLQQAIQEQPVVLLPSHRSYVDFLLLSYILYTYDLPVPVIAAGVDFLGMKVMGELLRRAGAFFMRRSFGGDKLYWAVFSEYVKTMLRNGYAPIEFFLEGTRSRTAKTLTPKLGLLNIVMEPFFKREVFDTYLVPISISYDRILEEALYSRELLGVPKPKESTAGLLKARQVLCQDFGCIHVYFAAPLSLRSLAAGRMEKSPYNLVPRHVPQKPSEEALAFANDVAFRVELLQIENMALSPWTLVATVLLQNLPALDLTLLVEKTLWLKGLIQAFGGFLVWPDDLSAARAVKGSLTLHANVARLSADGLVSVSGREEREPGPSQGTLFQRAVPFLTCAVYRNQLANLCVRPALVALALALATDSRKDDVYGCFSFLRDVFSDEFIFFPGRVVEDFEDGCFLLGRCEAVRVTSSHILPEAASGAVLPFLTAMFRPFVEGYQIACRYLWEEASEAFTEKQFVPGVRAFASQLIEAGTSRCYEALSSDLQKNALAALVRLGAVSKSRTASGIMYNTDREAVAKVEGMLGSRIPIGRPLTAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(307340..307383,308022..308083,308413..308506,308646..308745,309076..309216,309750..309829,309984..310235,311176..311399,311633..311763,312057..312208,313450..313525,313793..313920,314137..314266,315422..315598,316454..316642,318711..318749))
location: region:307340-318749:-1
so has part: feature:318711-318749:-1:exon
so has part: feature:316454-316642:-1:exon
so has part: feature:315422-315598:-1:exon
so has part: feature:314137-314266:-1:exon
so has part: feature:313793-313920:-1:exon
so has part: feature:313450-313525:-1:exon
so has part: feature:312057-312208:-1:exon
so has part: feature:311633-311763:-1:exon
so has part: feature:311176-311399:-1:exon
so has part: feature:309984-310235:-1:exon
so has part: feature:309750-309829:-1:exon
so has part: feature:309076-309216:-1:exon
so has part: feature:308646-308745:-1:exon
so has part: feature:308413-308506:-1:exon
so has part: feature:308022-308083:-1:exon
so has part: feature:307340-307383:-1:exon

XP_028903351.1
type: Protein
SIO_000068: ncbiprotein

position:307340:-1
position: 307340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318749:-1
position: 318749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318711-318749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316454-316642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315422-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314137-314266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313793-313920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313450-313525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312057-312208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311633-311763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311176-311399:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309984-310235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309750-309829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309076-309216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:308646-308745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:308413-308506:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308022-308083:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:307340-307383:-1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X1
translation: MAASGTSASSLRSQKDGGSKRWEEFEDMLEERRQSSDLRYALKCYAPVLYKGLNPCKPWAIKTAVLRAEEVQYVVKQLSRETGQSVQSIQETAAQILEEMGHSLRLGAIRLFAFSLSKIFKCLFRKVCVNQDGIQRLQQAIQEQPVVLLPSHRSYVDFLLLSYILYTYDLPVPVIAAGVDFLGMKVMGELLRRAGAFFMRRSFGGDKLYWAVFSEYVKTMLRNGYAPIEFFLEGTRSRTAKTLTPKLGLLNIVMEPFFKREVFDTYLVPISISYDRILEEALYSRELLGVPKPKESTAGLLKARQVLCQDFGCIHVYFAAPLSLRSLAAGRMEKSPYNLVPRHVPQKPSEEALAFANDVAFRVELLQIENMALSPWTLVATVLLQNLPALDLTLLVEKTLWLKGLIQAFGGFLVWPDDLSAARAVKGSLTLHANVARLSADGLVSVSGREEREPGPSQGTLFQRAVPFLTCAVYRNQLANLCVRPALVALALALATDSRKDDVYGCFSFLRDVFSDEFIFFPGRVVEDFEDGCFLLGRCEAVRVTSSHILPEAASGAVLPFLTAMFRPFVEGYQIACRYLWEEASEAFTEKQFVPGVRAFASQLIEAGTSRCYEALSSDLQKNALAALVRLGAVSKSRTASGIMYNTDREAVAKVEGMLGSRIPIGRPLTAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: complement(join(307340..307383,308022..308083,308413..308506,308646..308745,309076..309216,309750..309829,309984..310235,311176..311399,311633..311763,312057..312208,313450..313525,313793..313920,314137..314266,315422..315598,316454..316645,318711..318749))
location: region:307340-318749:-1
so has part: feature:318711-318749:-1:exon
so has part: feature:316454-316645:-1:exon
so has part: feature:315422-315598:-1:exon
so has part: feature:314137-314266:-1:exon
so has part: feature:313793-313920:-1:exon
so has part: feature:313450-313525:-1:exon
so has part: feature:312057-312208:-1:exon
so has part: feature:311633-311763:-1:exon
so has part: feature:311176-311399:-1:exon
so has part: feature:309984-310235:-1:exon
so has part: feature:309750-309829:-1:exon
so has part: feature:309076-309216:-1:exon
so has part: feature:308646-308745:-1:exon
so has part: feature:308413-308506:-1:exon
so has part: feature:308022-308083:-1:exon
so has part: feature:307340-307383:-1:exon

XP_028903350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318711-318749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316454-316645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315422-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314137-314266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313793-313920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313450-313525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312057-312208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311633-311763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311176-311399:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309984-310235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309750-309829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309076-309216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:308646-308745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:308413-308506:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308022-308083:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:307340-307383:-1:exon

C19H1orf131
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: C19H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 318994..323099
location: region:318994-323099:1
so has part: feature:318994-323099:1:exon
subclass of: SO_0000010

103165888
type: Gene
SIO_000068: ncbigene

position:318994:1
position: 318994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323099:1
position: 323099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318994-323099:1:exon

C19H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: C19H1orf131
product: chromosome 19 C1orf131 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_029047401.2
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(318994..319077,320478..320797,321160..321216,321388..321483,321613..321699,322047..322111,322419..323099)
location: region:318994-323099:1
so has part: feature:318994-319077:1:exon
so has part: feature:320478-320797:1:exon
so has part: feature:321160-321216:1:exon
so has part: feature:321388-321483:1:exon
so has part: feature:321613-321699:1:exon
so has part: feature:322047-322111:1:exon
so has part: feature:322419-323099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318994-319077:1:exon

position:319077:1
position: 319077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320478-320797:1:exon

position:320478:1
position: 320478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320797:1
position: 320797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321160-321216:1:exon

position:321160:1
position: 321160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321216:1
position: 321216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321388-321483:1:exon

position:321388:1
position: 321388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321483:1
position: 321483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:321613-321699:1:exon

position:321613:1
position: 321613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321699:1
position: 321699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322047-322111:1:exon

position:322047:1
position: 322047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322111:1
position: 322111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322419-323099:1:exon

position:322419:1
position: 322419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: C19H1orf131
product: chromosome 19 C1orf131 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_029047402.2
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(318994..319077,320478..320797,321160..321216,321388..321483,321613..321699,322047..322111,322419..322559,322659..323099)
location: region:318994-323099:1
so has part: feature:318994-319077:1:exon
so has part: feature:320478-320797:1:exon
so has part: feature:321160-321216:1:exon
so has part: feature:321388-321483:1:exon
so has part: feature:321613-321699:1:exon
so has part: feature:322047-322111:1:exon
so has part: feature:322419-322559:1:exon
so has part: feature:322659-323099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318994-319077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320478-320797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321160-321216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321388-321483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321613-321699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322047-322111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322419-322559:1:exon

position:322559:1
position: 322559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:322659-323099:1:exon

position:322659:1
position: 322659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: C19H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog
translation: MAEAAAAPLLDSVLRDLYDLGETPGRPQTKPRKRRGSAERREASGPDGPGTGAAAKEPGRRPKRSRHFFEELRGELRSVQGPAPDPVAPGPPEGGSRPVPVVEFCSRKKRQRPQPEVGGKPQAPAPQTKASVPKKEGGEPVFDLEKARLEVHRFGITSYGKWKERVLERERAIMLGAKPPRRKYVNYKKLQEKIKLQKAAKEQVSRAFTDPIRGPATLQKQRKKGQKERKPKRKRAPSAPSGAQEGQVGKFRNGMLLLSSQDIQKINSSRVVR
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(319017..319077,320478..320797,321160..321216,321388..321483,321613..321699,322047..322111,322419..322554)
location: region:319017-322554:1
so has part: feature:319017-319077:1:exon
so has part: feature:320478-320797:1:exon
so has part: feature:321160-321216:1:exon
so has part: feature:321388-321483:1:exon
so has part: feature:321613-321699:1:exon
so has part: feature:322047-322111:1:exon
so has part: feature:322419-322554:1:exon

XP_028903234.1
type: Protein
SIO_000068: ncbiprotein

position:319017:1
position: 319017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322554:1
position: 322554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319017-319077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320478-320797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321160-321216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321388-321483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321613-321699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322047-322111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322419-322554:1:exon

C19H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: C19H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog
translation: MAEAAAAPLLDSVLRDLYDLGETPGRPQTKPRKRRGSAERREASGPDGPGTGAAAKEPGRRPKRSRHFFEELRGELRSVQGPAPDPVAPGPPEGGSRPVPVVEFCSRKKRQRPQPEVGGKPQAPAPQTKASVPKKEGGEPVFDLEKARLEVHRFGITSYGKWKERVLERERAIMLGAKPPRRKYVNYKKLQEKIKLQKAAKEQVSRAFTDPIRGPATLQKQRKKGQKERKPKRKRAPSAPSGAQEGQVGKFRNGMLLLSSQDIQKINSSRVVR
SIO_010081: C19H1orf131
subclass of: SO_0000673
so part of: C19H1orf131
location: join(319017..319077,320478..320797,321160..321216,321388..321483,321613..321699,322047..322111,322419..322554)
location: region:319017-322554:1
so has part: feature:319017-319077:1:exon
so has part: feature:320478-320797:1:exon
so has part: feature:321160-321216:1:exon
so has part: feature:321388-321483:1:exon
so has part: feature:321613-321699:1:exon
so has part: feature:322047-322111:1:exon
so has part: feature:322419-322554:1:exon

XP_028903235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319017-319077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320478-320797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321160-321216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321388-321483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321613-321699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322047-322111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322419-322554:1:exon

TRIM67
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324804..337869)
location: region:324804-337869:-1
so has part: feature:324804-337869:-1:exon
subclass of: SO_0000010

100085067
type: Gene
SIO_000068: ncbigene

position:324804:-1
position: 324804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337869:-1
position: 337869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324804-337869:-1:exon

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TRIM67
product: tripartite motif containing 67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047400.2
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(324804..325760,327119..327281,327865..328168,328694..328832,329802..329947,330342..330501,331087..331197,333868..333990,334628..334723,336794..337000,337150..337869))
location: region:324804-337869:-1
so has part: feature:337150-337869:-1:exon
so has part: feature:336794-337000:-1:exon
so has part: feature:334628-334723:-1:exon
so has part: feature:333868-333990:-1:exon
so has part: feature:331087-331197:-1:exon
so has part: feature:330342-330501:-1:exon
so has part: feature:329802-329947:-1:exon
so has part: feature:328694-328832:-1:exon
so has part: feature:327865-328168:-1:exon
so has part: feature:327119-327281:-1:exon
so has part: feature:324804-325760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337150-337869:-1:exon

position:337150:-1
position: 337150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336794-337000:-1:exon

position:336794:-1
position: 336794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337000:-1
position: 337000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334628-334723:-1:exon

position:334628:-1
position: 334628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334723:-1
position: 334723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333868-333990:-1:exon

position:333868:-1
position: 333868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333990:-1
position: 333990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331087-331197:-1:exon

position:331087:-1
position: 331087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331197:-1
position: 331197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330342-330501:-1:exon

position:330342:-1
position: 330342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330501:-1
position: 330501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329802-329947:-1:exon

position:329802:-1
position: 329802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329947:-1
position: 329947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328694-328832:-1:exon

position:328694:-1
position: 328694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328832:-1
position: 328832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:327865-328168:-1:exon

position:327865:-1
position: 327865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328168:-1
position: 328168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:327119-327281:-1:exon

position:327119:-1
position: 327119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327281:-1
position: 327281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:324804-325760:-1:exon

position:325760:-1
position: 325760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TRIM67
product: tripartite motif containing 67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047399.2
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(324804..325760,327119..327281,327865..328168,328694..328832,329802..329947,330342..330501,331087..331197,333868..333990,334628..334723,336794..337000,337066..337869))
location: region:324804-337869:-1
so has part: feature:337066-337869:-1:exon
so has part: feature:336794-337000:-1:exon
so has part: feature:334628-334723:-1:exon
so has part: feature:333868-333990:-1:exon
so has part: feature:331087-331197:-1:exon
so has part: feature:330342-330501:-1:exon
so has part: feature:329802-329947:-1:exon
so has part: feature:328694-328832:-1:exon
so has part: feature:327865-328168:-1:exon
so has part: feature:327119-327281:-1:exon
so has part: feature:324804-325760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337066-337869:-1:exon

position:337066:-1
position: 337066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336794-337000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334628-334723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333868-333990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331087-331197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330342-330501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329802-329947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328694-328832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327865-328168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327119-327281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:324804-325760:-1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X2
translation: MEEELKCPVCGSLFRDPIILPCSHNVCLPCARTIALRTPDGERPPPARPGPPDPDPGPDPGPDPAPAPAPGPGPGPGPDLADKLSLHSEADSGYGSCTPGLRSPNGVRVLPPGPARGPAPPPPGGPPGGPPAPGPGAGSITCPQCHRSASLDPRGLRGFRRNRLLEAIVQRYRQARGAPGPGPPPPAGPAAPAAPAACQLCDRRPPEPAAALCQQCRVLYCAACRARCHPPRGPFAKHRLGPPGQGPPGQSPGTGGAARRAPACADHEGETYSMYCAPCRTPVCPRCLGDGAHAQHDLRPLSAAWRQHKAQLSQALNGVSDKAKEAKEFLVHLKDILQQIQENSLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKVVWEQINHCTLKLRQSTGLMEYCLEAIKENDPAGFLQVSDALIMRVQLSQEQWVKGALEPRVSAEFDLTLDSEPLLQTIHQLDFIQMKRRMPPTPLLQLEKCCTRNNSVTLAWRTPALAPGPVEGYVLELDDGDGGQYREVYVGKETVCTIDGLHFNSTYNARVKAFNSSGFGPYSKTVVLQTSDVAWFTFDPNTAHRDIVLSNDNQTATCSSYDDRVVLGTAAFSKGVHYWQLHVDRYDSHPDPAFGVARANVAKDMMLGKDDRAWAMYVDSNRSWFMHRNSHTSRTEGGVGQGTTVGVLLDLNEHTLTFFINGQQQGPTAFDHVDGVFMPALSLNRNVQVTLHTGLEVPLHLVPLKPPSN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(325695..325760,327119..327281,327865..328168,328694..328832,329802..329947,330342..330501,331087..331197,333868..333990,334628..334723,336794..337000,337150..337869))
location: region:325695-337869:-1
so has part: feature:337150-337869:-1:exon
so has part: feature:336794-337000:-1:exon
so has part: feature:334628-334723:-1:exon
so has part: feature:333868-333990:-1:exon
so has part: feature:331087-331197:-1:exon
so has part: feature:330342-330501:-1:exon
so has part: feature:329802-329947:-1:exon
so has part: feature:328694-328832:-1:exon
so has part: feature:327865-328168:-1:exon
so has part: feature:327119-327281:-1:exon
so has part: feature:325695-325760:-1:exon

XP_028903233.1
type: Protein
SIO_000068: ncbiprotein

position:325695:-1
position: 325695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337150-337869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336794-337000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334628-334723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333868-333990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331087-331197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330342-330501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329802-329947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328694-328832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327865-328168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327119-327281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325695-325760:-1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X1
translation: MEEELKCPVCGSLFRDPIILPCSHNVCLPCARTIALRTPDGERPPPARPGPPDPDPGPDPGPDPAPAPAPGPGPGPGPDLADKLSLHSEADSGYGSCTPGLRSPNGVRVLPPGPARGPAPPPPGGPPGGPPAPGPGAGSITCPQCHRSASLDPRGLRGFRRNRLLEAIVQRYRQARGAPGPGPPPPAGPAAPAAPAACQLCDRRPPEPAAALCQQCRVLYCAACRARCHPPRGPFAKHRLVALPAPAPAPAPAPAPAPAPAGPARDAPGPPGQGPPGQSPGTGGAARRAPACADHEGETYSMYCAPCRTPVCPRCLGDGAHAQHDLRPLSAAWRQHKAQLSQALNGVSDKAKEAKEFLVHLKDILQQIQENSLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKVVWEQINHCTLKLRQSTGLMEYCLEAIKENDPAGFLQVSDALIMRVQLSQEQWVKGALEPRVSAEFDLTLDSEPLLQTIHQLDFIQMKRRMPPTPLLQLEKCCTRNNSVTLAWRTPALAPGPVEGYVLELDDGDGGQYREVYVGKETVCTIDGLHFNSTYNARVKAFNSSGFGPYSKTVVLQTSDVAWFTFDPNTAHRDIVLSNDNQTATCSSYDDRVVLGTAAFSKGVHYWQLHVDRYDSHPDPAFGVARANVAKDMMLGKDDRAWAMYVDSNRSWFMHRNSHTSRTEGGVGQGTTVGVLLDLNEHTLTFFINGQQQGPTAFDHVDGVFMPALSLNRNVQVTLHTGLEVPLHLVPLKPPSN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: complement(join(325695..325760,327119..327281,327865..328168,328694..328832,329802..329947,330342..330501,331087..331197,333868..333990,334628..334723,336794..337000,337066..337869))
location: region:325695-337869:-1
so has part: feature:337066-337869:-1:exon
so has part: feature:336794-337000:-1:exon
so has part: feature:334628-334723:-1:exon
so has part: feature:333868-333990:-1:exon
so has part: feature:331087-331197:-1:exon
so has part: feature:330342-330501:-1:exon
so has part: feature:329802-329947:-1:exon
so has part: feature:328694-328832:-1:exon
so has part: feature:327865-328168:-1:exon
so has part: feature:327119-327281:-1:exon
so has part: feature:325695-325760:-1:exon

XP_028903232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337066-337869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336794-337000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334628-334723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333868-333990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331087-331197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330342-330501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329802-329947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328694-328832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327865-328168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327119-327281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325695-325760:-1:exon

FAM89A
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: FAM89A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344936..350303
location: region:344936-350303:1
so has part: feature:344936-350303:1:exon
subclass of: SO_0000010

114805695
type: Gene
SIO_000068: ncbigene

position:344936:1
position: 344936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350303:1
position: 350303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344936-350303:1:exon

FAM89A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: FAM89A
product: family with sequence similarity 89 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_029047403.2
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: join(344936..345255,349239..350303)
location: region:344936-350303:1
so has part: feature:344936-345255:1:exon
so has part: feature:349239-350303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344936-345255:1:exon

position:345255:1
position: 345255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349239-350303:1:exon

position:349239:1
position: 349239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM89A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: FAM89A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM89A
translation: MSSGSRGEGRAGPPGPPGLPPLPKSLSGLLHSASGSGSGSGSGGWRRLDRLYAQKSRIQDELSRGGAGVGAGAGRPAGRLRPHKPPNLDAALALLRKEMVGLRQLDMSLLCQLYSLYEAVQEFRGACQAASSPDGSDTMGHAFFDEDEEFFLPNGGDQDPRPDFSLPPGAFSGDVWIPDSV
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: join(344959..345255,349239..349487)
location: region:344959-349487:1
so has part: feature:344959-345255:1:exon
so has part: feature:349239-349487:1:exon

XP_028903236.1
type: Protein
SIO_000068: ncbiprotein

position:344959:1
position: 344959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349487:1
position: 349487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344959-345255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349239-349487:1:exon

ARV1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(353817..362706)
location: region:353817-362706:-1
so has part: feature:353817-362706:-1:exon
subclass of: SO_0000010

100092997
type: Gene
SIO_000068: ncbigene

position:353817:-1
position: 353817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362706:-1
position: 362706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353817-362706:-1:exon

ARV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARV1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_029047705.2
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(353817..354302,356693..356917,357517..357670,359455..359574,362542..362706))
location: region:353817-362706:-1
so has part: feature:362542-362706:-1:exon
so has part: feature:359455-359574:-1:exon
so has part: feature:357517-357670:-1:exon
so has part: feature:356693-356917:-1:exon
so has part: feature:353817-354302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362542-362706:-1:exon

position:362542:-1
position: 362542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359455-359574:-1:exon

position:359455:-1
position: 359455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359574:-1
position: 359574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357517-357670:-1:exon

position:357517:-1
position: 357517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357670:-1
position: 357670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356693-356917:-1:exon

position:356693:-1
position: 356693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356917:-1
position: 356917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:353817-354302:-1:exon

position:354302:-1
position: 354302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARV1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_029047704.2
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(353817..354559,356693..356917,357517..357670,359455..359574,362542..362705))
location: region:353817-362705:-1
so has part: feature:362542-362705:-1:exon
so has part: feature:359455-359574:-1:exon
so has part: feature:357517-357670:-1:exon
so has part: feature:356693-356917:-1:exon
so has part: feature:353817-354559:-1:exon

position:362705:-1
position: 362705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362542-362705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359455-359574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357517-357670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356693-356917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353817-354559:-1:exon

position:354559:-1
position: 354559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X2
translation: MAGPGLPGAADARRRYRCIECNGEASELYRDYSHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTQINIHGKLCIFCLLCEAYLRWLQLQDSSQSPDPDDLIRYAKEWDFYRMFAIASLEQTAFFAGIFTVLGLARPPALGTASSFVLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLTSHSQAVRDLHSKLEDARVTRAA
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(354256..354302,356693..356917,357517..357670,359455..359574,362542..362667))
location: region:354256-362667:-1
so has part: feature:362542-362667:-1:exon
so has part: feature:359455-359574:-1:exon
so has part: feature:357517-357670:-1:exon
so has part: feature:356693-356917:-1:exon
so has part: feature:354256-354302:-1:exon

XP_028903538.1
type: Protein
SIO_000068: ncbiprotein

position:354256:-1
position: 354256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362667:-1
position: 362667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362542-362667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359455-359574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357517-357670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356693-356917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354256-354302:-1:exon

ARV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X1
translation: MAGPGLPGAADARRRYRCIECNGEASELYRDYSHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTQINIHGKLCIFCLLCEAYLRWLQLQDSSQSPDPDDLIRYAKEWDFYRMFAIASLEQTAFFAGIFTVLGLARPPALGTASSFVLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLTSHSQAVRVTLNISRKLALLAILGGLVLESSLVCLFQRMGWDVGGSCPVYKA
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: complement(join(354426..354559,356693..356917,357517..357670,359455..359574,362542..362667))
location: region:354426-362667:-1
so has part: feature:362542-362667:-1:exon
so has part: feature:359455-359574:-1:exon
so has part: feature:357517-357670:-1:exon
so has part: feature:356693-356917:-1:exon
so has part: feature:354426-354559:-1:exon

XP_028903537.1
type: Protein
SIO_000068: ncbiprotein

position:354426:-1
position: 354426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362542-362667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359455-359574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357517-357670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356693-356917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354426-354559:-1:exon

TTC13
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363000..391525
location: region:363000-391525:1
so has part: feature:363000-391525:1:exon
subclass of: SO_0000010

100092991
type: Gene
SIO_000068: ncbigene

position:363000:1
position: 363000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391525:1
position: 391525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363000-391525:1:exon

TTC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TTC13
product: tetratricopeptide repeat domain 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_029047628.2
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(363000..363245,369932..370026,370778..370853,371254..371324,371730..371795,372072..372164,374585..374701,375584..375694,376602..376684,377627..377768,378248..378422,379393..379549,380026..380156,380597..380729,383880..383972,385547..385630,386961..387045,387248..387357,388261..388396,388890..388969,389767..389845,390292..390371,391302..391525)
location: region:363000-391525:1
so has part: feature:363000-363245:1:exon
so has part: feature:369932-370026:1:exon
so has part: feature:370778-370853:1:exon
so has part: feature:371254-371324:1:exon
so has part: feature:371730-371795:1:exon
so has part: feature:372072-372164:1:exon
so has part: feature:374585-374701:1:exon
so has part: feature:375584-375694:1:exon
so has part: feature:376602-376684:1:exon
so has part: feature:377627-377768:1:exon
so has part: feature:378248-378422:1:exon
so has part: feature:379393-379549:1:exon
so has part: feature:380026-380156:1:exon
so has part: feature:380597-380729:1:exon
so has part: feature:383880-383972:1:exon
so has part: feature:385547-385630:1:exon
so has part: feature:386961-387045:1:exon
so has part: feature:387248-387357:1:exon
so has part: feature:388261-388396:1:exon
so has part: feature:388890-388969:1:exon
so has part: feature:389767-389845:1:exon
so has part: feature:390292-390371:1:exon
so has part: feature:391302-391525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363000-363245:1:exon

position:363245:1
position: 363245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369932-370026:1:exon

position:369932:1
position: 369932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370026:1
position: 370026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370778-370853:1:exon

position:370778:1
position: 370778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370853:1
position: 370853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371254-371324:1:exon

position:371254:1
position: 371254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371324:1
position: 371324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371730-371795:1:exon

position:371730:1
position: 371730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371795:1
position: 371795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372072-372164:1:exon

position:372072:1
position: 372072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372164:1
position: 372164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:374585-374701:1:exon

position:374585:1
position: 374585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374701:1
position: 374701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:375584-375694:1:exon

position:375584:1
position: 375584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375694:1
position: 375694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376602-376684:1:exon

position:376602:1
position: 376602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376684:1
position: 376684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:377627-377768:1:exon

position:377627:1
position: 377627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377768:1
position: 377768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:378248-378422:1:exon

position:378248:1
position: 378248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378422:1
position: 378422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:379393-379549:1:exon

position:379393:1
position: 379393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379549:1
position: 379549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:380026-380156:1:exon

position:380026:1
position: 380026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380156:1
position: 380156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:380597-380729:1:exon

position:380597:1
position: 380597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380729:1
position: 380729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:383880-383972:1:exon

position:383880:1
position: 383880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383972:1
position: 383972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:385547-385630:1:exon

position:385547:1
position: 385547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385630:1
position: 385630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:386961-387045:1:exon

position:386961:1
position: 386961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387045:1
position: 387045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:387248-387357:1:exon

position:387248:1
position: 387248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387357:1
position: 387357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:388261-388396:1:exon

position:388261:1
position: 388261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388396:1
position: 388396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:388890-388969:1:exon

position:388890:1
position: 388890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388969:1
position: 388969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:389767-389845:1:exon

position:389767:1
position: 389767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389845:1
position: 389845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:390292-390371:1:exon

position:390292:1
position: 390292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390371:1
position: 390371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:391302-391525:1:exon

position:391302:1
position: 391302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TTC13
product: tetratricopeptide repeat domain 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_039914799.1
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(363000..363245,369932..370026,370778..370853,371254..371324,371730..371795,372072..372164,374585..374701,375584..375694,376602..376684,377627..377768,378248..378422,379393..379549,380026..380156,380597..380729,383880..383972,385547..385630,386961..387045,387251..387357,388261..388396,388890..388969,389767..389845,390292..390371,391302..391525)
location: region:363000-391525:1
so has part: feature:363000-363245:1:exon
so has part: feature:369932-370026:1:exon
so has part: feature:370778-370853:1:exon
so has part: feature:371254-371324:1:exon
so has part: feature:371730-371795:1:exon
so has part: feature:372072-372164:1:exon
so has part: feature:374585-374701:1:exon
so has part: feature:375584-375694:1:exon
so has part: feature:376602-376684:1:exon
so has part: feature:377627-377768:1:exon
so has part: feature:378248-378422:1:exon
so has part: feature:379393-379549:1:exon
so has part: feature:380026-380156:1:exon
so has part: feature:380597-380729:1:exon
so has part: feature:383880-383972:1:exon
so has part: feature:385547-385630:1:exon
so has part: feature:386961-387045:1:exon
so has part: feature:387251-387357:1:exon
so has part: feature:388261-388396:1:exon
so has part: feature:388890-388969:1:exon
so has part: feature:389767-389845:1:exon
so has part: feature:390292-390371:1:exon
so has part: feature:391302-391525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363000-363245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369932-370026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370778-370853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371254-371324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371730-371795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372072-372164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374585-374701:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375584-375694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376602-376684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377627-377768:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378248-378422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379393-379549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380026-380156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380597-380729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383880-383972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:385547-385630:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:386961-387045:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:387251-387357:1:exon

position:387251:1
position: 387251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:388261-388396:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388890-388969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:389767-389845:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:390292-390371:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391302-391525:1:exon

TTC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X1
translation: MAPAGAAAASARRASGLRPRWPPPPLLLLLLLPVEVLSAELPPDGPSPLSLLQQELRGRQAGGCGRASDDCGESSFLSFHDSDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFATDNVNMNEELAIAYVLIGSGLYDEAIRHFSSMLQEEPELISAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDRPDVLEQRAEILSPLGRVSEALSDLTKAIQLQPSARLYRHRGTLHFISEDYAAAHEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNEVCQHMRGLSHVALGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTLLTEYSVDEDLPGGFKDHWAKNLPFLIDDYEEQPGLQPHIKDVLPQNFDSYKLEVQELICAADRLGSLMQYETPGFLPNRRIHRAMGLAALEVMQAVRRTWANSKVRTHGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMSARSLSRGFNNHINLIRGQVINMRYLEYFERILHFIKDRILVYHGANNPKGLLEVREALDKVHRVEDLLPVMKQFNSKTRDGFTVNTKVPSLKDPGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTTKGKILILSSELGEADVVCNLILSLVYYFYNLMPLSRGSSVIAYSVIMGALMASGKEVSGKIPKGKLVDFEAMTAPGSEAFGKMAKSWMSLKSISPSYRSLPAVAETFPTLRSILEVLNTDSSPRCPKQL
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(363029..363245,369932..370026,370778..370853,371254..371324,371730..371795,372072..372164,374585..374701,375584..375694,376602..376684,377627..377768,378248..378422,379393..379549,380026..380156,380597..380729,383880..383972,385547..385630,386961..387045,387248..387357,388261..388396,388890..388969,389767..389845,390292..390371,391302..391416)
location: region:363029-391416:1
so has part: feature:363029-363245:1:exon
so has part: feature:369932-370026:1:exon
so has part: feature:370778-370853:1:exon
so has part: feature:371254-371324:1:exon
so has part: feature:371730-371795:1:exon
so has part: feature:372072-372164:1:exon
so has part: feature:374585-374701:1:exon
so has part: feature:375584-375694:1:exon
so has part: feature:376602-376684:1:exon
so has part: feature:377627-377768:1:exon
so has part: feature:378248-378422:1:exon
so has part: feature:379393-379549:1:exon
so has part: feature:380026-380156:1:exon
so has part: feature:380597-380729:1:exon
so has part: feature:383880-383972:1:exon
so has part: feature:385547-385630:1:exon
so has part: feature:386961-387045:1:exon
so has part: feature:387248-387357:1:exon
so has part: feature:388261-388396:1:exon
so has part: feature:388890-388969:1:exon
so has part: feature:389767-389845:1:exon
so has part: feature:390292-390371:1:exon
so has part: feature:391302-391416:1:exon

XP_028903461.1
type: Protein
SIO_000068: ncbiprotein

position:363029:1
position: 363029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391416:1
position: 391416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363029-363245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369932-370026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370778-370853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371254-371324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371730-371795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372072-372164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374585-374701:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375584-375694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376602-376684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377627-377768:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378248-378422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379393-379549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380026-380156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380597-380729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383880-383972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:385547-385630:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:386961-387045:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:387248-387357:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388261-388396:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388890-388969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:389767-389845:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:390292-390371:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391302-391416:1:exon

TTC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 13 isoform X2
translation: MAPAGAAAASARRASGLRPRWPPPPLLLLLLLPVEVLSAELPPDGPSPLSLLQQELRGRQAGGCGRASDDCGESSFLSFHDSDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFATDNVNMNEELAIAYVLIGSGLYDEAIRHFSSMLQEEPELISAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDRPDVLEQRAEILSPLGRVSEALSDLTKAIQLQPSARLYRHRGTLHFISEDYAAAHEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNEVCQHMRGLSHVALGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTLLTEYSVDEDLPGGFKDHWAKNLPFLIDDYEEQPGLQPHIKDVLPQNFDSYKLEVQELICAADRLGSLMQYETPGFLPNRRIHRAMGLAALEVMQAVRRTWANSKVRTHGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMSARSLSRGFNNHINLIRGQVINMRYLEYFERILHFIKDRILVYHGANNPKGLLEVREALDKVHRVEDLLPVMKFNSKTRDGFTVNTKVPSLKDPGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTTKGKILILSSELGEADVVCNLILSLVYYFYNLMPLSRGSSVIAYSVIMGALMASGKEVSGKIPKGKLVDFEAMTAPGSEAFGKMAKSWMSLKSISPSYRSLPAVAETFPTLRSILEVLNTDSSPRCPKQL
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: join(363029..363245,369932..370026,370778..370853,371254..371324,371730..371795,372072..372164,374585..374701,375584..375694,376602..376684,377627..377768,378248..378422,379393..379549,380026..380156,380597..380729,383880..383972,385547..385630,386961..387045,387251..387357,388261..388396,388890..388969,389767..389845,390292..390371,391302..391416)
location: region:363029-391416:1
so has part: feature:363029-363245:1:exon
so has part: feature:369932-370026:1:exon
so has part: feature:370778-370853:1:exon
so has part: feature:371254-371324:1:exon
so has part: feature:371730-371795:1:exon
so has part: feature:372072-372164:1:exon
so has part: feature:374585-374701:1:exon
so has part: feature:375584-375694:1:exon
so has part: feature:376602-376684:1:exon
so has part: feature:377627-377768:1:exon
so has part: feature:378248-378422:1:exon
so has part: feature:379393-379549:1:exon
so has part: feature:380026-380156:1:exon
so has part: feature:380597-380729:1:exon
so has part: feature:383880-383972:1:exon
so has part: feature:385547-385630:1:exon
so has part: feature:386961-387045:1:exon
so has part: feature:387251-387357:1:exon
so has part: feature:388261-388396:1:exon
so has part: feature:388890-388969:1:exon
so has part: feature:389767-389845:1:exon
so has part: feature:390292-390371:1:exon
so has part: feature:391302-391416:1:exon

XP_039770733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363029-363245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369932-370026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370778-370853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371254-371324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371730-371795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372072-372164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374585-374701:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375584-375694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376602-376684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377627-377768:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378248-378422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379393-379549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380026-380156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380597-380729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383880-383972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:385547-385630:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:386961-387045:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:387251-387357:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388261-388396:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388890-388969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:389767-389845:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:390292-390371:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391302-391416:1:exon

C19H1orf198
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: C19H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 395086..404735
location: region:395086-404735:1
so has part: feature:395086-404735:1:exon
subclass of: SO_0000010

103169081
type: Gene
SIO_000068: ncbigene

position:395086:1
position: 395086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404735:1
position: 404735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395086-404735:1:exon

C19H1orf198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: C19H1orf198
product: chromosome 19 C1orf198 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_029047573.2
SIO_010081: C19H1orf198
subclass of: SO_0000673
so part of: C19H1orf198
location: join(395086..395449,399096..399146,401396..401944,402966..404735)
location: region:395086-404735:1
so has part: feature:395086-395449:1:exon
so has part: feature:399096-399146:1:exon
so has part: feature:401396-401944:1:exon
so has part: feature:402966-404735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395086-395449:1:exon

position:395449:1
position: 395449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399096-399146:1:exon

position:399096:1
position: 399096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399146:1
position: 399146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401396-401944:1:exon

position:401396:1
position: 401396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401944:1
position: 401944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402966-404735:1:exon

position:402966:1
position: 402966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H1orf198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: C19H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf198 homolog
translation: MASMAAAIAASRTAALSGNRPLDDKERKRFTYFSSLSPMARKIMQDKERIRQRYGPDWERLPARRQDELIDRGLVEPHVQARYAAHCAAPSAAAPAATGQKVVHFGDEDLTWQDEHSAPFSWETKSQMEFSIASLSIQEPSGSLTQTDPRPAAKPTVGGKTPGADGPGAPRKEEESSSFWKISAERSRVEGTQAELPSLTPSQIKSLEKGEKGLTPYLRPEPAPWDREPARAERLGAPRQERTLLPGLGSERERAWPGPASPTKAGDSWLPEPAHVPASTASRQDGAGSDDAASDSAGGDVFESVSVQPNPSKVLLKTGFDFLDNW
SIO_010081: C19H1orf198
subclass of: SO_0000673
so part of: C19H1orf198
location: join(395126..395449,399096..399146,401396..401944,402966..403022)
location: region:395126-403022:1
so has part: feature:395126-395449:1:exon
so has part: feature:399096-399146:1:exon
so has part: feature:401396-401944:1:exon
so has part: feature:402966-403022:1:exon

XP_028903406.1
type: Protein
SIO_000068: ncbiprotein

position:395126:1
position: 395126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403022:1
position: 403022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395126-395449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399096-399146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401396-401944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402966-403022:1:exon

CAPN9
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: CAPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406266..420839)
location: region:406266-420839:-1
so has part: feature:406266-420839:-1:exon
subclass of: SO_0000010

100092978
type: Gene
SIO_000068: ncbigene

position:406266:-1
position: 406266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420839:-1
position: 420839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406266-420839:-1:exon

CAPN9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: CAPN9
product: calpain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_001521409.3
SIO_010081: CAPN9
subclass of: SO_0000673
so part of: CAPN9
location: complement(join(406266..406292,407604..407662,409051..409167,409645..409723,409904..409972,411067..411131,411453..411515,411665..411740,411935..411971,412290..412498,413012..413169,413549..413709,414687..414764,415264..415349,416092..416175,416612..416780,417423..417556,418692..418810,419317..419386,420630..420839))
location: region:406266-420839:-1
so has part: feature:420630-420839:-1:exon
so has part: feature:419317-419386:-1:exon
so has part: feature:418692-418810:-1:exon
so has part: feature:417423-417556:-1:exon
so has part: feature:416612-416780:-1:exon
so has part: feature:416092-416175:-1:exon
so has part: feature:415264-415349:-1:exon
so has part: feature:414687-414764:-1:exon
so has part: feature:413549-413709:-1:exon
so has part: feature:413012-413169:-1:exon
so has part: feature:412290-412498:-1:exon
so has part: feature:411935-411971:-1:exon
so has part: feature:411665-411740:-1:exon
so has part: feature:411453-411515:-1:exon
so has part: feature:411067-411131:-1:exon
so has part: feature:409904-409972:-1:exon
so has part: feature:409645-409723:-1:exon
so has part: feature:409051-409167:-1:exon
so has part: feature:407604-407662:-1:exon
so has part: feature:406266-406292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420630-420839:-1:exon

position:420630:-1
position: 420630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419317-419386:-1:exon

position:419317:-1
position: 419317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419386:-1
position: 419386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418692-418810:-1:exon

position:418692:-1
position: 418692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418810:-1
position: 418810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:417423-417556:-1:exon

position:417423:-1
position: 417423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417556:-1
position: 417556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:416612-416780:-1:exon

position:416612:-1
position: 416612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416780:-1
position: 416780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416092-416175:-1:exon

position:416092:-1
position: 416092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416175:-1
position: 416175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415264-415349:-1:exon

position:415264:-1
position: 415264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415349:-1
position: 415349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:414687-414764:-1:exon

position:414687:-1
position: 414687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414764:-1
position: 414764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:413549-413709:-1:exon

position:413549:-1
position: 413549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413709:-1
position: 413709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:413012-413169:-1:exon

position:413012:-1
position: 413012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413169:-1
position: 413169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:412290-412498:-1:exon

position:412290:-1
position: 412290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412498:-1
position: 412498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:411935-411971:-1:exon

position:411935:-1
position: 411935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411971:-1
position: 411971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:411665-411740:-1:exon

position:411665:-1
position: 411665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411740:-1
position: 411740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:411453-411515:-1:exon

position:411453:-1
position: 411453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411515:-1
position: 411515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:411067-411131:-1:exon

position:411067:-1
position: 411067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411131:-1
position: 411131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:409904-409972:-1:exon

position:409904:-1
position: 409904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409972:-1
position: 409972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:409645-409723:-1:exon

position:409645:-1
position: 409645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409723:-1
position: 409723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:409051-409167:-1:exon

position:409051:-1
position: 409051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409167:-1
position: 409167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:407604-407662:-1:exon

position:407604:-1
position: 407604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407662:-1
position: 407662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:406266-406292:-1:exon

position:406292:-1
position: 406292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPN9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: CAPN9
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(418692..418694),aa:OTHER)
product: LOW QUALITY PROTEIN: calpain-9
translation: MPPPLGQTPGPREPHLGQVSPGPPGRTFEELRDRCLRRGVLFEDPDFPADDSSLFFSEMPPIPFAWKRPGEIARNPEFVSDGATRTDICQGELGDCWLLAAIASLTLNPRVLARVVPPQQSFGPDYAGIFHFXLWQHGQWLDVVIDDRLPTFKDRLVFLHSADHNEFWSALLEKAYVKLNGSYEALKGGSTIEAMEDFTGGVAETLDVKAISQGLSEILRKVLDRGSLVACSIEARNASDSEAWTPFGLVKGHAYSVTGTDQVTFRGRRVELVRVRNPWGQVEWNGPWSDDSSEWRSVDPSEKKRLYHTALDDGEFWMPFADFEAHFDKVEICNLTPDALEGGTLLQWEVAVHHGSWVKGATAGGCRNFLDTFWTNPQIKLSLSKEDGGKEDCTLVVALMQKNRRKLKKFGANMLTIGYAIYQCPGQDGHLGRDFFRCHASQARSKTYVNLREVSGRFKLPPGEYVLVPSTFEPHQEADFCLRIFSEKAAVTQDLDGQVNVELPEPLKPTSRQQETEEERQFRILFEKVAAQDLQISAEELQEILNAVLRNTKNIQFKKLSLVSCRNIISLMDTNGSGKLELDEFKAFWARLKAWTNIFFQFDGDKSGTMSSYELRGALKAAGFQLNNNLLQLLVLRYADERLQVDFDDFLNCLVRLENTSRVFQALKATDSEFLSLSVGEFILLAMNI
SIO_010081: CAPN9
subclass of: SO_0000673
so part of: CAPN9
location: complement(join(406266..406292,407604..407662,409051..409167,409645..409723,409904..409972,411067..411131,411453..411515,411665..411740,411935..411971,412290..412498,413012..413169,413549..413709,414687..414764,415264..415349,416092..416175,416612..416780,417423..417556,418692..418810,419317..419386,420630..420839))
location: region:406266-420839:-1
so has part: feature:420630-420839:-1:exon
so has part: feature:419317-419386:-1:exon
so has part: feature:418692-418810:-1:exon
so has part: feature:417423-417556:-1:exon
so has part: feature:416612-416780:-1:exon
so has part: feature:416092-416175:-1:exon
so has part: feature:415264-415349:-1:exon
so has part: feature:414687-414764:-1:exon
so has part: feature:413549-413709:-1:exon
so has part: feature:413012-413169:-1:exon
so has part: feature:412290-412498:-1:exon
so has part: feature:411935-411971:-1:exon
so has part: feature:411665-411740:-1:exon
so has part: feature:411453-411515:-1:exon
so has part: feature:411067-411131:-1:exon
so has part: feature:409904-409972:-1:exon
so has part: feature:409645-409723:-1:exon
so has part: feature:409051-409167:-1:exon
so has part: feature:407604-407662:-1:exon
so has part: feature:406266-406292:-1:exon

XP_001521459.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420630-420839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419317-419386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418692-418810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417423-417556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416612-416780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416092-416175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415264-415349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414687-414764:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413549-413709:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413012-413169:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412290-412498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411935-411971:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411665-411740:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411453-411515:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411067-411131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:409904-409972:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:409645-409723:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:409051-409167:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407604-407662:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:406266-406292:-1:exon

AGT
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: AGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426520..431664
location: region:426520-431664:1
so has part: feature:426520-431664:1:exon
subclass of: SO_0000010

100092976
type: Gene
SIO_000068: ncbigene

position:426520:1
position: 426520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431664:1
position: 431664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426520-431664:1:exon

AGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: AGT
product: angiotensinogen
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_007664735.3
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(426520..426705,427150..427224,427754..428643,429740..430007,430646..430790,431297..431664)
location: region:426520-431664:1
so has part: feature:426520-426705:1:exon
so has part: feature:427150-427224:1:exon
so has part: feature:427754-428643:1:exon
so has part: feature:429740-430007:1:exon
so has part: feature:430646-430790:1:exon
so has part: feature:431297-431664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426520-426705:1:exon

position:426705:1
position: 426705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427150-427224:1:exon

position:427150:1
position: 427150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427224:1
position: 427224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427754-428643:1:exon

position:427754:1
position: 427754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428643:1
position: 428643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:429740-430007:1:exon

position:429740:1
position: 429740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430007:1
position: 430007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430646-430790:1:exon

position:430646:1
position: 430646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430790:1
position: 430790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431297-431664:1:exon

position:431297:1
position: 431297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: AGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiotensinogen
translation: MAQTLTLLCLLGWAAVVAGDRVYVHPFHFLTNGPERCAEPGGPAAGSPAGKTFVPVPIQAKTSPLDEAALWERVTAQVGSLGPEDQERAAGVAALLNFLGFRLRRALRAPQDGQGKARQGTLLAPAAVFGSLASLHLGASGTTAGDLQALLGVPQEDGGCSSRLDGEKVLAALRAVVGLFLAGEAGGAGAGDPRLRLSTLVGLFTSPGLHLREAFFRSLQPAAAVTHARSLDLATDPGLAAERIDRFVGAVTGWPRRLPLTPSCPDDTLLLNTYVRFQAAIGGASRLVQPQEFQVNRTSHELVPMLSVTGTFQYRRDDANNFTVVWVPLGANARLLLVQPHPGMAPEQVEASLWTTDFPAWLNRLEPRTVHLTLPRLTMESAVNLQDLLALSKLPHLLHRKANFRGISEDDVRVGKVMNTVLFELTESGPEAPEEPTSASVDSEPLEVTLNRPFLLAVYERVTKALLFLGRVTDPLRGV
SIO_010081: AGT
subclass of: SO_0000673
so part of: AGT
location: join(427809..428643,429740..430007,430646..430790,431297..431488)
location: region:427809-431488:1
so has part: feature:427809-428643:1:exon
so has part: feature:429740-430007:1:exon
so has part: feature:430646-430790:1:exon
so has part: feature:431297-431488:1:exon

XP_007662925.2
type: Protein
SIO_000068: ncbiprotein

position:427809:1
position: 427809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431488:1
position: 431488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427809-428643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429740-430007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430646-430790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431297-431488:1:exon

COG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(432824..453016)
location: region:432824-453016:-1
so has part: feature:432824-453016:-1:exon
subclass of: SO_0000010

100092973
type: Gene
SIO_000068: ncbigene

position:432824:-1
position: 432824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453016:-1
position: 453016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432824-453016:-1:exon

COG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: COG2
product: component of oligomeric golgi complex 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_029047360.2
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(432824..433193,434154..434334,435662..435801,435981..436123,436470..436542,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446099,446377..446457,447082..447147,448383..448544,452818..453016))
location: region:432824-453016:-1
so has part: feature:452818-453016:-1:exon
so has part: feature:448383-448544:-1:exon
so has part: feature:447082-447147:-1:exon
so has part: feature:446377-446457:-1:exon
so has part: feature:445996-446099:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:432824-433193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452818-453016:-1:exon

position:452818:-1
position: 452818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448383-448544:-1:exon

position:448383:-1
position: 448383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448544:-1
position: 448544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447082-447147:-1:exon

position:447082:-1
position: 447082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447147:-1
position: 447147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446377-446457:-1:exon

position:446377:-1
position: 446377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446457:-1
position: 446457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445996-446099:-1:exon

position:445996:-1
position: 445996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446099:-1
position: 446099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444611-444719:-1:exon

position:444611:-1
position: 444611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444719:-1
position: 444719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:443915-444094:-1:exon

position:443915:-1
position: 443915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444094:-1
position: 444094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:443333-443457:-1:exon

position:443333:-1
position: 443333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443457:-1
position: 443457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:442570-442696:-1:exon

position:442570:-1
position: 442570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442696:-1
position: 442696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:441815-441954:-1:exon

position:441815:-1
position: 441815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441954:-1
position: 441954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439670-439731:-1:exon

position:439670:-1
position: 439670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439731:-1
position: 439731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:438227-438378:-1:exon

position:438227:-1
position: 438227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438378:-1
position: 438378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:436470-436542:-1:exon

position:436470:-1
position: 436470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436542:-1
position: 436542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:435981-436123:-1:exon

position:435981:-1
position: 435981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436123:-1
position: 436123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:435662-435801:-1:exon

position:435662:-1
position: 435662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435801:-1
position: 435801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:434154-434334:-1:exon

position:434154:-1
position: 434154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434334:-1
position: 434334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:432824-433193:-1:exon

position:433193:-1
position: 433193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: COG2
product: component of oligomeric golgi complex 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_029047359.2
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(432824..433193,434154..434334,435662..435801,435981..436123,436470..436542,437261..437467,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446099,446377..446457,447082..447147,448383..448544,452818..453015))
location: region:432824-453015:-1
so has part: feature:452818-453015:-1:exon
so has part: feature:448383-448544:-1:exon
so has part: feature:447082-447147:-1:exon
so has part: feature:446377-446457:-1:exon
so has part: feature:445996-446099:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:437261-437467:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:432824-433193:-1:exon

position:453015:-1
position: 453015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452818-453015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448383-448544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447082-447147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446377-446457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445996-446099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444611-444719:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443915-444094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443333-443457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442570-442696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:441815-441954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439670-439731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438227-438378:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:437261-437467:-1:exon

position:437261:-1
position: 437261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437467:-1
position: 437467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:436470-436542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435981-436123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435662-435801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:434154-434334:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:432824-433193:-1:exon

COG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: COG2
product: component of oligomeric golgi complex 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029047361.1
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(432824..433193,434154..434334,435662..435801,435981..436123,436470..436542,437261..437467,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446101,446378..446457,447082..447147))
location: region:432824-447147:-1
so has part: feature:447082-447147:-1:exon
so has part: feature:446378-446457:-1:exon
so has part: feature:445996-446101:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:437261-437467:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:432824-433193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447082-447147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446378-446457:-1:exon

position:446378:-1
position: 446378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445996-446101:-1:exon

position:446101:-1
position: 446101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:444611-444719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443915-444094:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443333-443457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:442570-442696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441815-441954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439670-439731:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:438227-438378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437261-437467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:436470-436542:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435981-436123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435662-435801:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:434154-434334:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:432824-433193:-1:exon

COG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 2 isoform X2
translation: MEKRRMNLPKGPDTLCFDKDQFMKDDFDVDHFVSDCRRRVQLEELRDDLELYYRLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLKSSVSEGIRAIDEQMSKQDDIRRKKMCVLRLIQVIRSVEKIEKILHSQGPNQASSLEGSSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSNVDIVRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIVEPLVQAHPKGLQAMYGKLLEFVPHHCRLLREVTGGTSSSERGNSVPGYDFLVNSVWPEIVRGLEERLPWLFNPGNPDSFHERYTVSMDFVRRFERQCGSQASVKRLRAHSSYHSFNNKWNLPVYFQIRFREIAAGLERALSDGLEEAPAGSSYCLLATHVTWASVTRCWSDELFLPLLAPRLWKLTLQILARFVTFVKELPGLLEVIQPKLEVIGFKNVSCLSAALEDSRTSLSECLPPLSRRVVQGLSEACFGCLKSALEVPRLYRRTNKEVPSKASPYVDGALKPFHQLQEDHRDTLPPTLARQWLEEALSESARRYIDTVSDVLSSVRKMEESLKRLKQARKAAAVTPAGSSGGMSDDDKIRLQLALDVERFVEQVRGMGLQTSDIDSFSALIELAAAAKEQVTAEQP
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(433092..433193,434154..434334,435662..435801,435981..436123,436470..436542,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446099,446377..446457,447082..447147,448383..448544,452818..452889))
location: region:433092-452889:-1
so has part: feature:452818-452889:-1:exon
so has part: feature:448383-448544:-1:exon
so has part: feature:447082-447147:-1:exon
so has part: feature:446377-446457:-1:exon
so has part: feature:445996-446099:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:433092-433193:-1:exon

XP_028903193.1
type: Protein
SIO_000068: ncbiprotein

position:433092:-1
position: 433092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452889:-1
position: 452889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452818-452889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448383-448544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447082-447147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446377-446457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445996-446099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444611-444719:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443915-444094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443333-443457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442570-442696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:441815-441954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439670-439731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438227-438378:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:436470-436542:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435981-436123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435662-435801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434154-434334:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:433092-433193:-1:exon

COG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 2 isoform X1
translation: MEKRRMNLPKGPDTLCFDKDQFMKDDFDVDHFVSDCRRRVQLEELRDDLELYYRLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLKSSVSEGIRAIDEQMSKQDDIRRKKMCVLRLIQVIRSVEKIEKILHSQGPNQASSLEGSSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSNVDIVRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIVEPLVQAHPKGLQAMYGKLLEFVPHHCRLLREVTGGTSSSERGNSVPGYDFLVNSVWPEIVRGLEERLPWLFNPGNPDSFHERYTVSMDFVRRFERQCGSQASVKRLRAHSSYHSFNNKWNLPVYFQIRFREIAAGLERALSDGLEEAPAGSSYCLLATHVTWASVTRCWSDELFLPLLAPRLWKLTLQILARFVTFVKELSLRPASSENTKDSKKVVGTVGKDGISPGPAAGEEPGSCSSSETPPPAPSISGPQLVFVVADVDRLQGQLPGLLEVIQPKLEVIGFKNVSCLSAALEDSRTSLSECLPPLSRRVVQGLSEACFGCLKSALEVPRLYRRTNKEVPSKASPYVDGALKPFHQLQEDHRDTLPPTLARQWLEEALSESARRYIDTVSDVLSSVRKMEESLKRLKQARKAAAVTPAGSSGGMSDDDKIRLQLALDVERFVEQVRGMGLQTSDIDSFSALIELAAAAKEQVTAEQP
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(433092..433193,434154..434334,435662..435801,435981..436123,436470..436542,437261..437467,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446099,446377..446457,447082..447147,448383..448544,452818..452889))
location: region:433092-452889:-1
so has part: feature:452818-452889:-1:exon
so has part: feature:448383-448544:-1:exon
so has part: feature:447082-447147:-1:exon
so has part: feature:446377-446457:-1:exon
so has part: feature:445996-446099:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:437261-437467:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:433092-433193:-1:exon

XP_028903192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452818-452889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448383-448544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447082-447147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446377-446457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445996-446099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444611-444719:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443915-444094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443333-443457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442570-442696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:441815-441954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439670-439731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438227-438378:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:437261-437467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:436470-436542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435981-436123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435662-435801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:434154-434334:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:433092-433193:-1:exon

COG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: COG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 2 isoform X3
translation: MNKCPNKTTSGEKKMCVLRLIQVIRSVEKIEKILHSQGPNQASSLEGSSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSNVDIVRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIVEPLVQAHPKGLQAMYGKLLEFVPHHCRLLREVTGGTSSSERGNSVPGYDFLVNSVWPEIVRGLEERLPWLFNPGNPDSFHERYTVSMDFVRRFERQCGSQASVKRLRAHSSYHSFNNKWNLPVYFQIRFREIAAGLERALSDGLEEAPAGSSYCLLATHVTWASVTRCWSDELFLPLLAPRLWKLTLQILARFVTFVKELSLRPASSENTKDSKKVVGTVGKDGISPGPAAGEEPGSCSSSETPPPAPSISGPQLVFVVADVDRLQGQLPGLLEVIQPKLEVIGFKNVSCLSAALEDSRTSLSECLPPLSRRVVQGLSEACFGCLKSALEVPRLYRRTNKEVPSKASPYVDGALKPFHQLQEDHRDTLPPTLARQWLEEALSESARRYIDTVSDVLSSVRKMEESLKRLKQARKAAAVTPAGSSGGMSDDDKIRLQLALDVERFVEQVRGMGLQTSDIDSFSALIELAAAAKEQVTAEQP
SIO_010081: COG2
subclass of: SO_0000673
so part of: COG2
location: complement(join(433092..433193,434154..434334,435662..435801,435981..436123,436470..436542,437261..437467,438227..438378,439670..439731,441815..441954,442570..442696,443333..443457,443915..444094,444611..444719,445996..446101,446378..446417))
location: region:433092-446417:-1
so has part: feature:446378-446417:-1:exon
so has part: feature:445996-446101:-1:exon
so has part: feature:444611-444719:-1:exon
so has part: feature:443915-444094:-1:exon
so has part: feature:443333-443457:-1:exon
so has part: feature:442570-442696:-1:exon
so has part: feature:441815-441954:-1:exon
so has part: feature:439670-439731:-1:exon
so has part: feature:438227-438378:-1:exon
so has part: feature:437261-437467:-1:exon
so has part: feature:436470-436542:-1:exon
so has part: feature:435981-436123:-1:exon
so has part: feature:435662-435801:-1:exon
so has part: feature:434154-434334:-1:exon
so has part: feature:433092-433193:-1:exon

XP_028903194.1
type: Protein
SIO_000068: ncbiprotein

position:446417:-1
position: 446417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446378-446417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445996-446101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444611-444719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443915-444094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443333-443457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442570-442696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441815-441954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:439670-439731:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438227-438378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437261-437467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:436470-436542:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435981-436123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435662-435801:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:434154-434334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433092-433193:-1:exon

PGBD5
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 461404..488632
location: region:461404-488632:1
so has part: feature:461404-488632:1:exon
subclass of: SO_0000010

103169395
type: Gene
SIO_000068: ncbigene

position:461404:1
position: 461404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488632:1
position: 488632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461404-488632:1:exon

PGBD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PGBD5
product: piggyBac transposable element derived 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_007664734.3
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: join(461404..461980,476202..476629,478184..478318,482326..482506,483643..483840,484817..484922,485987..488632)
location: region:461404-488632:1
so has part: feature:461404-461980:1:exon
so has part: feature:476202-476629:1:exon
so has part: feature:478184-478318:1:exon
so has part: feature:482326-482506:1:exon
so has part: feature:483643-483840:1:exon
so has part: feature:484817-484922:1:exon
so has part: feature:485987-488632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461404-461980:1:exon

position:461980:1
position: 461980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476202-476629:1:exon

position:476202:1
position: 476202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476629:1
position: 476629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478184-478318:1:exon

position:478184:1
position: 478184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478318:1
position: 478318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:482326-482506:1:exon

position:482326:1
position: 482326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482506:1
position: 482506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:483643-483840:1:exon

position:483643:1
position: 483643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483840:1
position: 483840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484817-484922:1:exon

position:484817:1
position: 484817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484922:1
position: 484922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485987-488632:1:exon

position:485987:1
position: 485987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGBD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5
translation: MAEAEAGGPPAAPRKKALSLLEAARSRYESLQISDDVFGESGPDSGGNPFYSTSADSRSASSSDDDDEAPDPGATGDLGRQKGHRLPTDAAGGGGGGGGGGGGPGVPRAAAVGRPQQQQRSSPPPPGPMEEEEEEEDVEEADEERRGGWTQALTDAPPPRFEETSGPTRKMPPNARAVDFFQLFVPDNVLKNMAVQTNMYAKKFQERFGSDGAWAEVTLPEMKAFLGYVISTSIYHCESVLSIWSSGFYSNKSIALVMTQARFEKILKYFHVVAFRSSQTSHGLYKIQPFLDSLQNGFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSATGFISQIYVHLKEGAGADGLDALKNKPQLHSLVAKSLCQNAAGKNYIIFTGPSITSLTLFEEFEKQEIYCCGLLSSRKSDCTGLPLSMLDSPEAPQARGQYRIKMKGNMSLICWYNKGHFRFLTNAYSPTQRGVIIKRKSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAVSIAINNAYILYKMSDAYHVQRFSRAQFGERLVRELLGLEDGSPAH
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: join(461485..461980,476202..476629,478184..478318,482326..482506,483643..483840,484817..484922,485987..486182)
location: region:461485-486182:1
so has part: feature:461485-461980:1:exon
so has part: feature:476202-476629:1:exon
so has part: feature:478184-478318:1:exon
so has part: feature:482326-482506:1:exon
so has part: feature:483643-483840:1:exon
so has part: feature:484817-484922:1:exon
so has part: feature:485987-486182:1:exon

XP_007662924.2
type: Protein
SIO_000068: ncbiprotein

position:461485:1
position: 461485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486182:1
position: 486182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461485-461980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476202-476629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478184-478318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482326-482506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:483643-483840:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484817-484922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485987-486182:1:exon

GALNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490777..522662)
location: region:490777-522662:-1
so has part: feature:490777-522662:-1:exon
subclass of: SO_0000010

100092956
type: Gene
SIO_000068: ncbigene

position:490777:-1
position: 490777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522662:-1
position: 522662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490777-522662:-1:exon

GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GALNT2
product: polypeptide N-acetylgalactosaminyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047539.1
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: complement(join(490777..493041,493618..493737,494086..494212,494530..494613,494978..495070,495956..496082,497175..497278,498082..498169,498895..498982,499552..499673,501111..501176,501547..501614,501714..501812,502070..502223,503540..503633,522487..522662))
location: region:490777-522662:-1
so has part: feature:522487-522662:-1:exon
so has part: feature:503540-503633:-1:exon
so has part: feature:502070-502223:-1:exon
so has part: feature:501714-501812:-1:exon
so has part: feature:501547-501614:-1:exon
so has part: feature:501111-501176:-1:exon
so has part: feature:499552-499673:-1:exon
so has part: feature:498895-498982:-1:exon
so has part: feature:498082-498169:-1:exon
so has part: feature:497175-497278:-1:exon
so has part: feature:495956-496082:-1:exon
so has part: feature:494978-495070:-1:exon
so has part: feature:494530-494613:-1:exon
so has part: feature:494086-494212:-1:exon
so has part: feature:493618-493737:-1:exon
so has part: feature:490777-493041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522487-522662:-1:exon

position:522487:-1
position: 522487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503540-503633:-1:exon

position:503540:-1
position: 503540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503633:-1
position: 503633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502070-502223:-1:exon

position:502070:-1
position: 502070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502223:-1
position: 502223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501714-501812:-1:exon

position:501714:-1
position: 501714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501812:-1
position: 501812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501547-501614:-1:exon

position:501547:-1
position: 501547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501614:-1
position: 501614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:501111-501176:-1:exon

position:501111:-1
position: 501111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501176:-1
position: 501176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499552-499673:-1:exon

position:499552:-1
position: 499552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499673:-1
position: 499673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:498895-498982:-1:exon

position:498895:-1
position: 498895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498982:-1
position: 498982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498082-498169:-1:exon

position:498082:-1
position: 498082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498169:-1
position: 498169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:497175-497278:-1:exon

position:497175:-1
position: 497175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497278:-1
position: 497278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:495956-496082:-1:exon

position:495956:-1
position: 495956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496082:-1
position: 496082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:494978-495070:-1:exon

position:494978:-1
position: 494978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495070:-1
position: 495070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:494530-494613:-1:exon

position:494530:-1
position: 494530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494613:-1
position: 494613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:494086-494212:-1:exon

position:494086:-1
position: 494086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494212:-1
position: 494212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:493618-493737:-1:exon

position:493618:-1
position: 493618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493737:-1
position: 493737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:490777-493041:-1:exon

position:493041:-1
position: 493041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 2
translation: MRRRSRLLLCFAVLWALGIAYYVYSGGSAALAGAGAGAGAGGAEDWNEIDPVKKKDAHGANGEDKAQSVETLPPGKVRWQDFNQEAYVGVTMVRSGQDPYARNKFNQVESDKLRMDRAVPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVASVLKKSPPHLVKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQARVLTFLDSHCECNEHWLEPLLERVAEDKTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRARQGNPVAPIKTPMIAGGLFVMDKSYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKRLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKDRSVKHMDLCLTVVERTPGALVKLQGCRENDSRQKWEQIEGNSKLRYVGSNLCLDSRNARSGGLGVEVCGPALSQQWKFTLNLQP
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: complement(join(492886..493041,493618..493737,494086..494212,494530..494613,494978..495070,495956..496082,497175..497278,498082..498169,498895..498982,499552..499673,501111..501176,501547..501614,501714..501812,502070..502223,503540..503633,522487..522615))
location: region:492886-522615:-1
so has part: feature:522487-522615:-1:exon
so has part: feature:503540-503633:-1:exon
so has part: feature:502070-502223:-1:exon
so has part: feature:501714-501812:-1:exon
so has part: feature:501547-501614:-1:exon
so has part: feature:501111-501176:-1:exon
so has part: feature:499552-499673:-1:exon
so has part: feature:498895-498982:-1:exon
so has part: feature:498082-498169:-1:exon
so has part: feature:497175-497278:-1:exon
so has part: feature:495956-496082:-1:exon
so has part: feature:494978-495070:-1:exon
so has part: feature:494530-494613:-1:exon
so has part: feature:494086-494212:-1:exon
so has part: feature:493618-493737:-1:exon
so has part: feature:492886-493041:-1:exon

XP_028903372.1
type: Protein
SIO_000068: ncbiprotein

position:492886:-1
position: 492886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522615:-1
position: 522615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522487-522615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503540-503633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502070-502223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501714-501812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501547-501614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501111-501176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499552-499673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498895-498982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498082-498169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:497175-497278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:495956-496082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494978-495070:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:494530-494613:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:494086-494212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:493618-493737:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492886-493041:-1:exon

URB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(536093..550783)
location: region:536093-550783:-1
so has part: feature:536093-550783:-1:exon
subclass of: SO_0000010

100092928
type: Gene
SIO_000068: ncbigene

position:536093:-1
position: 536093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550783:-1
position: 550783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536093-550783:-1:exon

URB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: URB2
product: URB2 ribosome biogenesis homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029047363.1
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(536093..537565,538293..538432,540046..540133,540954..541196,541774..541884,542903..543063,543584..546890,547892..548068,548850..548977,550700..550783))
location: region:536093-550783:-1
so has part: feature:550700-550783:-1:exon
so has part: feature:548850-548977:-1:exon
so has part: feature:547892-548068:-1:exon
so has part: feature:543584-546890:-1:exon
so has part: feature:542903-543063:-1:exon
so has part: feature:541774-541884:-1:exon
so has part: feature:540954-541196:-1:exon
so has part: feature:540046-540133:-1:exon
so has part: feature:538293-538432:-1:exon
so has part: feature:536093-537565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550700-550783:-1:exon

position:550700:-1
position: 550700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548850-548977:-1:exon

position:548850:-1
position: 548850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548977:-1
position: 548977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547892-548068:-1:exon

position:547892:-1
position: 547892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548068:-1
position: 548068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543584-546890:-1:exon

position:543584:-1
position: 543584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546890:-1
position: 546890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542903-543063:-1:exon

position:542903:-1
position: 542903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543063:-1
position: 543063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541774-541884:-1:exon

position:541774:-1
position: 541774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541884:-1
position: 541884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:540954-541196:-1:exon

position:540954:-1
position: 540954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541196:-1
position: 541196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540046-540133:-1:exon

position:540046:-1
position: 540046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540133:-1
position: 540133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:538293-538432:-1:exon

position:538293:-1
position: 538293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538432:-1
position: 538432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:536093-537565:-1:exon

position:537565:-1
position: 537565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAIYSGISLKLKSSKTAWTDKLKLAHFAWVSHQCFLPNKEQVLLNWARHTLVSYYKKKLELQEDIVERLWIYLDNILRSRRLQNLFKEGKTIQLHFSLAKVLNERIAEFQTAETRSEAGPVLSCCRSLLSVPTLAAVYTAKHELLVELLSQLCRVACRPPAPAGASPALLLDVLHLALGLYLLVQRQQANPNRVFAEVVGHLLQPGLVLRHVLAAGAGTGDAAGGGSCPAGRPPPVREIRSQIEAVLRGGLFPAELLPSYKEELGSPESAGDRRKGALKTLLAPADVVLAKLADAGPREPAFHAAVVAHSVPLLFKLFLEAYCRDGYQLVCFQAGAKLLGCLRLARLRDGPRPETPELPDWSSELLALEQFLTALLGHQIYNVAADRIRHRELQFRFYRRLAGLLLGHPQPALPVWFRCLRALVSLNHLIVEPDLEGLVAAAWMDAGVGEPRSRRAQEALLVTLFQTYARLRQVPRLLDAVLAVVCRPGAGQGRPPALTAGLAAALSACFLELPPGQVLDSWALALDRGQALLAPSGQGDADAALKLWSVSSLLHAVLFAAKTLDGATPLPLVRRARGLMERMLSAVIQPALVLLQDHRGPSPPLWLEKVGDSGLLLAYTWAELDAMFSLNCDRYASPAGAGEALPALLLGADAQGWGAAAEALGGPATVGRHCLELLALQTMKRILAPGHLPSERGLQALRDAASLVLSSDFGGTEAAAAWDGQAGTVTALTYPAAHWHLLVSNLPLLLPYLEADDVERLAGELLRTGAGAPSPPDGPAGREPDITVAGVSQALLHSPLLPEMQPLHAAFLDRVLESCVGVLSAGRLPAAAPLGQMLPWLLAHGLTPGARRESHPDGDEPGGPGPREEVAESLLALASAPEPPVVLAEGQLDALLVMLDVVSALDPDGLPPPFLVRTYLLLLTLVAGTGGAGSLPATRAVRYLDACYRLLSRLQGVEEARAVFRVVFASDVFQVVVTALWAARVRFPAATEAPAWTGPLWAAATLLERLLQMTVRLKLSPMLNCGKIVSFLSTCGPYTEAISGRGPRDPDCPARRVLLVAVMTLCRELSPLVHQRQGQTTRALPDLWLRALSLVGAVVRAAWTERPRDRPPHPVLLSAIAALLEAETSGEAEDRAPELAHADLYRDAFSHVRTELPALAGDAESLRPALRLLTLFRAEPALHPGEGSVFAAVFQAVTGVLADGGARDQAIQNAGPQLGELLAGLLEGGTAADFQLVMEHVLRGLDIRHVWTRNLNEVLGALALMKLLLSRPLTGEKATSFWLACPQIIGALAHQNREACRDPSLLAPVVLPILEALADLLRRGEGLIGNPHHVTLAFAILLAVPLDHLPAEEYGPVFLGVHEVLFAILQYHPKVMMKAIPSFLNCFNRLLFSVMHEGRQKDKGNTEDQAGVLECARLVERMYSHIAAKAEEFTVFSPFMVAQYLSGLQKATLRPAVKELLKEGIYLILDICLERDIQFLRVSLPAGVRDAFKELYHDYTVYHKSKSEGEKKYTA
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: complement(join(537368..537565,538293..538432,540046..540133,540954..541196,541774..541884,542903..543063,543584..546890,547892..548068,548850..548975))
location: region:537368-548975:-1
so has part: feature:548850-548975:-1:exon
so has part: feature:547892-548068:-1:exon
so has part: feature:543584-546890:-1:exon
so has part: feature:542903-543063:-1:exon
so has part: feature:541774-541884:-1:exon
so has part: feature:540954-541196:-1:exon
so has part: feature:540046-540133:-1:exon
so has part: feature:538293-538432:-1:exon
so has part: feature:537368-537565:-1:exon

XP_028903196.1
type: Protein
SIO_000068: ncbiprotein

position:537368:-1
position: 537368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548975:-1
position: 548975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548850-548975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547892-548068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543584-546890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542903-543063:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541774-541884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540954-541196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540046-540133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:538293-538432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537368-537565:-1:exon

TAF5L
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 551397..561765
location: region:551397-561765:1
so has part: feature:551397-561765:1:exon
subclass of: SO_0000010

100092867
type: Gene
SIO_000068: ncbigene

position:551397:1
position: 551397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561765:1
position: 561765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551397-561765:1:exon

TAF5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TAF5L
product: TATA-box binding protein associated factor 5 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_029047364.1
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: join(551397..551429,552897..553041,554134..554238,555701..556425,560654..561765)
location: region:551397-561765:1
so has part: feature:551397-551429:1:exon
so has part: feature:552897-553041:1:exon
so has part: feature:554134-554238:1:exon
so has part: feature:555701-556425:1:exon
so has part: feature:560654-561765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551397-551429:1:exon

position:551429:1
position: 551429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552897-553041:1:exon

position:552897:1
position: 552897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553041:1
position: 553041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:554134-554238:1:exon

position:554134:1
position: 554134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554238:1
position: 554238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555701-556425:1:exon

position:555701:1
position: 555701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556425:1
position: 556425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560654-561765:1:exon

position:560654:1
position: 560654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
translation: MKRVRTEQIQMAVSCYLKRRQYVDSEGPQKQGLRLCQTAEEMAANLTVQSESGCANVVSAAPCQVEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLSMVQSGLKSTVDSFYSRFHGLFLQNAGQKDVIEQLQTALTPQDILANLTLRAFLDNKYVVRLQEDSYNFLLRYLQSDDNGALVQVLTLHIHLDVQPAKRTDYQLYASGGSSRGESHGLEPTDGPPALLRNEAALEALRDSIRRVRDGPPSLTTICFYAFYHTEQLLNTAEISPDGRLLAAGFDDSCVKLWSLRSQKLKAEPHCVDVARVHLACDVLDAEEEDGAGTEMKTLRGHCGPVYGTRFLSDGSGLLSCSEDTSIRYWDLGTFTNTVLYQGHSYPVWDLDVSPCSLYFASASHDRTARLWSPDRTYPLRVYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGSSVRLFTGHRGPVLSLAFSPNGKFLASAGEDQRLKLWDLAGGAPFKELRGHTDNITSLAFSPDSSLVASASMDNSVRVWDIRSAHCGAAADGSSGELVGVYAGQASSVLSVQFGACNLLLVTGVTQENQEH
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: join(552900..553041,554134..554238,555701..556425,560654..561445)
location: region:552900-561445:1
so has part: feature:552900-553041:1:exon
so has part: feature:554134-554238:1:exon
so has part: feature:555701-556425:1:exon
so has part: feature:560654-561445:1:exon

XP_028903197.1
type: Protein
SIO_000068: ncbiprotein

position:552900:1
position: 552900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561445:1
position: 561445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552900-553041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554134-554238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555701-556425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560654-561445:1:exon

ABCB10
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 564004..580700
location: region:564004-580700:1
so has part: feature:564004-580700:1:exon
subclass of: SO_0000010

100092920
type: Gene
SIO_000068: ncbigene

position:564004:1
position: 564004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580700:1
position: 580700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564004-580700:1:exon

ABCB10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ABCB10
product: ATP binding cassette subfamily B member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_029047627.2
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: join(564004..564619,571400..571600,572264..572466,572853..572987,573278..573424,574033..574168,574294..574389,574925..575134,576552..576631,577258..577438,578487..578530,579338..579372,579785..580700)
location: region:564004-580700:1
so has part: feature:564004-564619:1:exon
so has part: feature:571400-571600:1:exon
so has part: feature:572264-572466:1:exon
so has part: feature:572853-572987:1:exon
so has part: feature:573278-573424:1:exon
so has part: feature:574033-574168:1:exon
so has part: feature:574294-574389:1:exon
so has part: feature:574925-575134:1:exon
so has part: feature:576552-576631:1:exon
so has part: feature:577258-577438:1:exon
so has part: feature:578487-578530:1:exon
so has part: feature:579338-579372:1:exon
so has part: feature:579785-580700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564004-564619:1:exon

position:564619:1
position: 564619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571400-571600:1:exon

position:571400:1
position: 571400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571600:1
position: 571600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572264-572466:1:exon

position:572264:1
position: 572264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572466:1
position: 572466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572853-572987:1:exon

position:572853:1
position: 572853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572987:1
position: 572987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573278-573424:1:exon

position:573278:1
position: 573278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573424:1
position: 573424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:574033-574168:1:exon

position:574033:1
position: 574033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574168:1
position: 574168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574294-574389:1:exon

position:574294:1
position: 574294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574389:1
position: 574389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574925-575134:1:exon

position:574925:1
position: 574925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575134:1
position: 575134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576552-576631:1:exon

position:576552:1
position: 576552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576631:1
position: 576631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:577258-577438:1:exon

position:577258:1
position: 577258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577438:1
position: 577438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:578487-578530:1:exon

position:578487:1
position: 578487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578530:1
position: 578530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:579338-579372:1:exon

position:579338:1
position: 579338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579372:1
position: 579372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:579785-580700:1:exon

position:579785:1
position: 579785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABCB10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial
translation: MPRLLLLLLRPAPAPAPAPAPAAAPGLMAPLPRGWGRGSGPPGWALRAGAGTGGRCYCSCRRLQQVLPLRPPCWPGARGLVRLLGLRPGPGWARFSSSGIPSGISSGTPSGISSGTSGGSGVPGPSRPDAKRLLDLAYPERWRLTAAVGFLTVSSVITMSAPFFLGRIIDVIYSSPTGDYTHNLGHLCAALSGVFLCGAVANGIRVYLMQTAGQRIVNRLRGSLFSSILKQEVAFFDRTRTGELVNRLSADTALLGRAVTENLSDGLRAVAQASVGVGMMFFVSPSLATFVLGIVPPMSILAVVYGRYLRKLSKATQDSLAQATQLAEERIGNIRTVRAFGKELAEMDKYLARVQHVLQLAKRDALARAGFFGATGLSGNLIVLAVLYKGGLLMGSAHMTVGELSSFLMYAFWVGLSVGGLSSFYSELMKGLGAGGRLWELLERRPELPFDEGVTLNPKTFRGDLEFRGVRFAYPTRPEVPIFQDFNLSIPAGSVTALVGPSGSGKSTVVSLLLRLYDPEAGTISVDGRDIRQVNPIWLRSNIGTVSQEPVLFSCSIAENIAYGADRPTSVTPADIRKVADVANAAAFIHGFPQGFDTLVGEKGVLLSGGQKQRIAIARALLKNPRILLLDEATSALDAENETVVQEALERLMEGRTVLVIAHRLSTIKKASVVAVLSQGKIIERGKHDQLLSNPNGVYSSLVRKQTFLSADDGGQEQGAPCFPRVAGRSQ
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: join(564184..564619,571400..571600,572264..572466,572853..572987,573278..573424,574033..574168,574294..574389,574925..575134,576552..576631,577258..577438,578487..578530,579338..579372,579785..580076)
location: region:564184-580076:1
so has part: feature:564184-564619:1:exon
so has part: feature:571400-571600:1:exon
so has part: feature:572264-572466:1:exon
so has part: feature:572853-572987:1:exon
so has part: feature:573278-573424:1:exon
so has part: feature:574033-574168:1:exon
so has part: feature:574294-574389:1:exon
so has part: feature:574925-575134:1:exon
so has part: feature:576552-576631:1:exon
so has part: feature:577258-577438:1:exon
so has part: feature:578487-578530:1:exon
so has part: feature:579338-579372:1:exon
so has part: feature:579785-580076:1:exon

XP_028903460.1
type: Protein
SIO_000068: ncbiprotein

position:564184:1
position: 564184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580076:1
position: 580076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564184-564619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571400-571600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572264-572466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572853-572987:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573278-573424:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574033-574168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574294-574389:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574925-575134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576552-576631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577258-577438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578487-578530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:579338-579372:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:579785-580076:1:exon

NUP133
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <584073..607336
location: region:584073-607336:1
so has part: feature:584073-607336:1:exon
subclass of: SO_0000010

100092914
type: Gene
SIO_000068: ncbigene

position:584073:1
position: 584073
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:607336:1
position: 607336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584073-607336:1:exon

NUP133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NUP133
product: nucleoporin 133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_029047630.2
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: join(<584073..584206,585868..585986,587092..587195,587872..587979,588773..588910,590931..591101,591735..591890,591972..592042,592384..592531,592776..592923,593997..594154,594761..594852,595754..595911,596176..596270,596758..596982,597725..597847,598522..598621,599566..599817,600264..600397,601750..601908,602276..602411,602791..602909,604181..604261,604730..604794,606062..606150,607046..607336)
location: region:584073-607336:1
so has part: feature:584073-584206:1:exon
so has part: feature:585868-585986:1:exon
so has part: feature:587092-587195:1:exon
so has part: feature:587872-587979:1:exon
so has part: feature:588773-588910:1:exon
so has part: feature:590931-591101:1:exon
so has part: feature:591735-591890:1:exon
so has part: feature:591972-592042:1:exon
so has part: feature:592384-592531:1:exon
so has part: feature:592776-592923:1:exon
so has part: feature:593997-594154:1:exon
so has part: feature:594761-594852:1:exon
so has part: feature:595754-595911:1:exon
so has part: feature:596176-596270:1:exon
so has part: feature:596758-596982:1:exon
so has part: feature:597725-597847:1:exon
so has part: feature:598522-598621:1:exon
so has part: feature:599566-599817:1:exon
so has part: feature:600264-600397:1:exon
so has part: feature:601750-601908:1:exon
so has part: feature:602276-602411:1:exon
so has part: feature:602791-602909:1:exon
so has part: feature:604181-604261:1:exon
so has part: feature:604730-604794:1:exon
so has part: feature:606062-606150:1:exon
so has part: feature:607046-607336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584073-584206:1:exon

position:584206:1
position: 584206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585868-585986:1:exon

position:585868:1
position: 585868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585986:1
position: 585986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587092-587195:1:exon

position:587092:1
position: 587092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587195:1
position: 587195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587872-587979:1:exon

position:587872:1
position: 587872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587979:1
position: 587979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:588773-588910:1:exon

position:588773:1
position: 588773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588910:1
position: 588910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590931-591101:1:exon

position:590931:1
position: 590931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591101:1
position: 591101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:591735-591890:1:exon

position:591735:1
position: 591735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591890:1
position: 591890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:591972-592042:1:exon

position:591972:1
position: 591972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592042:1
position: 592042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:592384-592531:1:exon

position:592384:1
position: 592384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592531:1
position: 592531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:592776-592923:1:exon

position:592776:1
position: 592776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592923:1
position: 592923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:593997-594154:1:exon

position:593997:1
position: 593997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594154:1
position: 594154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:594761-594852:1:exon

position:594761:1
position: 594761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594852:1
position: 594852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595754-595911:1:exon

position:595754:1
position: 595754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595911:1
position: 595911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:596176-596270:1:exon

position:596176:1
position: 596176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596270:1
position: 596270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:596758-596982:1:exon

position:596758:1
position: 596758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596982:1
position: 596982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:597725-597847:1:exon

position:597725:1
position: 597725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597847:1
position: 597847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:598522-598621:1:exon

position:598522:1
position: 598522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598621:1
position: 598621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:599566-599817:1:exon

position:599566:1
position: 599566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599817:1
position: 599817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:600264-600397:1:exon

position:600264:1
position: 600264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600397:1
position: 600397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:601750-601908:1:exon

position:601750:1
position: 601750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601908:1
position: 601908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:602276-602411:1:exon

position:602276:1
position: 602276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602411:1
position: 602411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:602791-602909:1:exon

position:602791:1
position: 602791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602909:1
position: 602909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:604181-604261:1:exon

position:604181:1
position: 604181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604261:1
position: 604261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:604730-604794:1:exon

position:604730:1
position: 604730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604794:1
position: 604794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:606062-606150:1:exon

position:606062:1
position: 606062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606150:1
position: 606150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:607046-607336:1:exon

position:607046:1
position: 607046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup133
translation: SPASRRTGPGPAPRSAARKSLALPAAIGAPGLLSPMGRRGSLGARGTPTRTGQHQSASETTNYDIKTFGSSLPVKVMEALALAEVDDQLTACVDESGWAWLVCRERLIVWKIGQSSVAKLSVCKELQLPPTDLDWNADLVALSCPAQPGEAPSAQSVAVMAATREGAVRYWPSLVHEGSFTETVIDLGGADRTCSFLTAVKGGSFVLATSGSQLFRLLPEGSGKIPHHALPQGQGVLSGIGRRVSSLLGILSPSSEIMLSSVLWDREHEVLYTLTSSNINKWEMDDSSERQALSWDINRALKENIADAIWGSESNYEGIKGGINVEYLDLQQTCDGLVILAVAWHPGDSPCLMYYTLVTVEDAGYQMADEVTVEVTQFNPPFQGEESAVCRLVVPDASAQGAFLYTENAVFACSTGTGRSSLPQEKILFEAQGDGILGAGSCAGLPVFFSRNNGLVSILSRESMSVLPEDVEDSIASSVAGPHPEPSLLDSTAKIDAVSQEDKTKLLKAAFLQYCRKDLGQAQSMVDELFSPEADSETEVDRAVTQISVDLVDDYPASDPRWAESVPEEAAGFSNTSLILLHQLEDKMKAHSFLVDFIHQVGLFERLGTFPVRGAPMATRLLLCEHAEKLAAAIVLKNHHSRLPDLVNTALLIALNKRECDVPPSLTPADVFFREVSQVDTIFECLLEEEERVLKETPMECAEWAQLVVSVNSILKDMLHAASQYRHSRNSLYTGDELADKEPEYIPWTASSGPAGVRTAIIRQHEIVLKGVYPQVDSSLRGVLTEQLVALIDSVLDGYVTQLKSVDGPGNRERYSTLEMEYTQRRSDLLSPLLHLGQHQWAASLAEKYCDFDILVQLCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVAQHGQLASFLQAHDHLSWLHEIHSQDLEKAHATLQGLANAETRYFAKKKTLLGLSKLVALASDFPEDVLQEKIEEMCEQERFLLHQETLPEQLLAEKQMTLNMMPVLTAPQLIGLYICDENTRANEYDFKKALDLLEYINEEEDVDINDLKLKILCRALQRDTWSSAEGKDDPIEASKDSIFVKILQKLVKEGIRLSDYLPEVKDLLQADELGNLKSNPYFEFALKANYELYVQGQM
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: join(<584073..584206,585868..585986,587092..587195,587872..587979,588773..588910,590931..591101,591735..591890,591972..592042,592384..592531,592776..592923,593997..594154,594761..594852,595754..595911,596176..596270,596758..596982,597725..597847,598522..598621,599566..599817,600264..600397,601750..601908,602276..602411,602791..602909,604181..604261,604730..604794,606062..606150,607046..607182)
location: region:584073-607182:1
so has part: feature:584073-584206:1:exon
so has part: feature:585868-585986:1:exon
so has part: feature:587092-587195:1:exon
so has part: feature:587872-587979:1:exon
so has part: feature:588773-588910:1:exon
so has part: feature:590931-591101:1:exon
so has part: feature:591735-591890:1:exon
so has part: feature:591972-592042:1:exon
so has part: feature:592384-592531:1:exon
so has part: feature:592776-592923:1:exon
so has part: feature:593997-594154:1:exon
so has part: feature:594761-594852:1:exon
so has part: feature:595754-595911:1:exon
so has part: feature:596176-596270:1:exon
so has part: feature:596758-596982:1:exon
so has part: feature:597725-597847:1:exon
so has part: feature:598522-598621:1:exon
so has part: feature:599566-599817:1:exon
so has part: feature:600264-600397:1:exon
so has part: feature:601750-601908:1:exon
so has part: feature:602276-602411:1:exon
so has part: feature:602791-602909:1:exon
so has part: feature:604181-604261:1:exon
so has part: feature:604730-604794:1:exon
so has part: feature:606062-606150:1:exon
so has part: feature:607046-607182:1:exon

XP_028903463.2
type: Protein
SIO_000068: ncbiprotein

position:607182:1
position: 607182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584073-584206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585868-585986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587092-587195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587872-587979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588773-588910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590931-591101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591735-591890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:591972-592042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:592384-592531:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:592776-592923:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593997-594154:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594761-594852:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595754-595911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596176-596270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:596758-596982:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:597725-597847:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:598522-598621:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:599566-599817:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:600264-600397:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:601750-601908:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:602276-602411:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:602791-602909:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:604181-604261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:604730-604794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:606062-606150:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:607046-607182:1:exon

ACTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 612430..619265
location: region:612430-619265:1
so has part: feature:612430-619265:1:exon
subclass of: SO_0000010

100083726
type: Gene
SIO_000068: ncbigene

position:612430:1
position: 612430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619265:1
position: 619265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612430-619265:1:exon

ACTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ACTA1
product: actin alpha 1, skeletal muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 109 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029047709.1
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: join(612430..612537,613921..614061,614755..615079,615624..615785,616102..616293,617631..617812,618897..619265)
location: region:612430-619265:1
so has part: feature:612430-612537:1:exon
so has part: feature:613921-614061:1:exon
so has part: feature:614755-615079:1:exon
so has part: feature:615624-615785:1:exon
so has part: feature:616102-616293:1:exon
so has part: feature:617631-617812:1:exon
so has part: feature:618897-619265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612430-612537:1:exon

position:612537:1
position: 612537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613921-614061:1:exon

position:613921:1
position: 613921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614061:1
position: 614061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614755-615079:1:exon

position:614755:1
position: 614755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615079:1
position: 615079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615624-615785:1:exon

position:615624:1
position: 615624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615785:1
position: 615785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616102-616293:1:exon

position:616102:1
position: 616102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616293:1
position: 616293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617631-617812:1:exon

position:617631:1
position: 617631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617812:1
position: 617812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618897-619265:1:exon

position:618897:1
position: 618897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: join(613933..614061,614755..615079,615624..615785,616102..616293,617631..617812,618897..619040)
location: region:613933-619040:1
so has part: feature:613933-614061:1:exon
so has part: feature:614755-615079:1:exon
so has part: feature:615624-615785:1:exon
so has part: feature:616102-616293:1:exon
so has part: feature:617631-617812:1:exon
so has part: feature:618897-619040:1:exon

XP_028903542.1
type: Protein
SIO_000068: ncbiprotein

position:613933:1
position: 613933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619040:1
position: 619040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613933-614061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614755-615079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615624-615785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616102-616293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617631-617812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618897-619040:1:exon

LOC100088981
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC100088981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 624395..630979
location: region:624395-630979:1
so has part: feature:624395-630979:1:exon
subclass of: SO_0000010

100088981
type: Gene
SIO_000068: ncbigene

position:624395:1
position: 624395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630979:1
position: 630979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624395-630979:1:exon

LOC100088981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100088981
product: centriole, cilia and spindle associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_029047631.2
SIO_010081: LOC100088981
subclass of: SO_0000673
so part of: LOC100088981
location: join(624395..624578,627507..627772,629030..630979)
location: region:624395-630979:1
so has part: feature:624395-624578:1:exon
so has part: feature:627507-627772:1:exon
so has part: feature:629030-630979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624395-624578:1:exon

position:624578:1
position: 624578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627507-627772:1:exon

position:627507:1
position: 627507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627772:1
position: 627772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:629030-630979:1:exon

position:629030:1
position: 629030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100088981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100088981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein
translation: MGPGSGPGPGRRVRSEYMKRFQDPPWEACGPRYRELLRYRRARRMLEQAHWPWLGDQDRPADSLEPGERGQSEEQAEKNEVNKQMGPRDAPRRPSALPDRGDQKPPGSPQRAARVRENKHPFALYGWGEKQTDTGAQKTHNVCASASTREIHASAIRAKNRNQAEKRKMGNERQRNPAEDGEKPRRAKPPSAESPWVTEYMRCYSARVR
SIO_010081: LOC100088981
subclass of: SO_0000673
so part of: LOC100088981
location: join(624395..624578,627507..627772,629030..629209)
location: region:624395-629209:1
so has part: feature:624395-624578:1:exon
so has part: feature:627507-627772:1:exon
so has part: feature:629030-629209:1:exon

XP_028903464.1
type: Protein
SIO_000068: ncbiprotein

position:629209:1
position: 629209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624395-624578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627507-627772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629030-629209:1:exon

RAB4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633480..649098)
location: region:633480-649098:-1
so has part: feature:633480-649098:-1:exon
subclass of: SO_0000010

100088960
type: Gene
SIO_000068: ncbigene

position:633480:-1
position: 633480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649098:-1
position: 649098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633480-649098:-1:exon

RAB4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: RAB4A
product: RAB4A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_029047562.2
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: complement(join(633480..634072,634695..634836,635909..636004,638559..638713,640196..640258,642413..642527,643521..643601,648949..649098))
location: region:633480-649098:-1
so has part: feature:648949-649098:-1:exon
so has part: feature:643521-643601:-1:exon
so has part: feature:642413-642527:-1:exon
so has part: feature:640196-640258:-1:exon
so has part: feature:638559-638713:-1:exon
so has part: feature:635909-636004:-1:exon
so has part: feature:634695-634836:-1:exon
so has part: feature:633480-634072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648949-649098:-1:exon

position:648949:-1
position: 648949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643521-643601:-1:exon

position:643521:-1
position: 643521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643601:-1
position: 643601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642413-642527:-1:exon

position:642413:-1
position: 642413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642527:-1
position: 642527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640196-640258:-1:exon

position:640196:-1
position: 640196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640258:-1
position: 640258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638559-638713:-1:exon

position:638559:-1
position: 638559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638713:-1
position: 638713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:635909-636004:-1:exon

position:635909:-1
position: 635909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636004:-1
position: 636004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:634695-634836:-1:exon

position:634695:-1
position: 634695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634836:-1
position: 634836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:633480-634072:-1:exon

position:634072:-1
position: 634072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A
translation: MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAQSVQDCGC
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: complement(join(634721..634836,635909..636004,638559..638713,640196..640258,642413..642527,643521..643601,648949..648979))
location: region:634721-648979:-1
so has part: feature:648949-648979:-1:exon
so has part: feature:643521-643601:-1:exon
so has part: feature:642413-642527:-1:exon
so has part: feature:640196-640258:-1:exon
so has part: feature:638559-638713:-1:exon
so has part: feature:635909-636004:-1:exon
so has part: feature:634721-634836:-1:exon

XP_028903395.1
type: Protein
SIO_000068: ncbiprotein

position:634721:-1
position: 634721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648979:-1
position: 648979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648949-648979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643521-643601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642413-642527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640196-640258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638559-638713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635909-636004:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634721-634836:-1:exon

RHOU
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685273..694399)
location: region:685273-694399:-1
so has part: feature:685273-694399:-1:exon
subclass of: SO_0000010

100092904
type: Gene
SIO_000068: ncbigene

position:685273:-1
position: 685273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694399:-1
position: 694399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685273-694399:-1:exon

RHOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: RHOU
product: ras homolog family member U
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_029047563.2
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: complement(join(685273..687111,691881..691939,693910..694399))
location: region:685273-694399:-1
so has part: feature:693910-694399:-1:exon
so has part: feature:691881-691939:-1:exon
so has part: feature:685273-687111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693910-694399:-1:exon

position:693910:-1
position: 693910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691881-691939:-1:exon

position:691881:-1
position: 691881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691939:-1
position: 691939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685273-687111:-1:exon

position:687111:-1
position: 687111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoU
translation: MPPDQRAHPYLGQAGPAACQVPPVPPRRLRRGPGTDPAAAAAAAGLKCVLVGDGAVGKTSLVVSYTTNGYPTHYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYAHADVFLLCFSVVSPASFQNIREKWVPEVRRHCPGAPVVLVGTQSDLRQDVGVLIELDRGREKPVAGRAARLCADEVGAAAYVECSALTQKNLKEVFDAAILAGIRFSDAQQQHQHQQQPPKKAKSRTPDKMKTLSKAWWKKYCCLA
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: complement(join(686635..687111,691881..691939,693910..694159))
location: region:686635-694159:-1
so has part: feature:693910-694159:-1:exon
so has part: feature:691881-691939:-1:exon
so has part: feature:686635-687111:-1:exon

XP_028903396.1
type: Protein
SIO_000068: ncbiprotein

position:686635:-1
position: 686635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694159:-1
position: 694159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693910-694159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691881-691939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686635-687111:-1:exon

EXOC8
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(700686..702905)
location: region:700686-702905:-1
so has part: feature:700686-702905:-1:exon
subclass of: SO_0000010

100092895
type: Gene
SIO_000068: ncbigene

position:700686:-1
position: 700686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702905:-1
position: 702905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700686-702905:-1:exon

EXOC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: EXOC8
product: exocyst complex component 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047702.2
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(700686..702905)
location: region:700686-702905:-1
so has part: feature:700686-702905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700686-702905:-1:exon

EXOC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 8
translation: MSDGGAGRLRRQLESSGFEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQSLKRNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSSLESIPLALLPASSSSSSAASGQPSEEPGSDAPAPPAEDGRQRTLTTLLEKVEGCRPLLDTPGQRLVYNGDLVEYEADHMAQLQRVHGFLLSDCLLVATWLPQRRGVYRFNALYPLDGLAVVNVKDNPPMKDMFKLLMFPEGRIFQAENAKVKREWLEVLEEAKRALAGERRLRQQEAAAPRPPPPPADPFDDDDDDDRRRPERRRREAEAGPAAPDWVRELPEDLDVCIAQRDFEGAVDLLDRLDRHLRAGPPALPELRARVDERVRQLTDVLVFELSPGRSLRGGPRATRRAVSQLIRLGQGTKACGLFLRNRAAAVRGAIRQLRIEGSTLLYIHKLCRVFFTGLLETAREFETDFAGAHGGGCYSALVVWARAAVGLFVDAFSGRVFDGKESLSTAAECVKVAREHCRRLGALGLDLTFVLHALLLKDIRGALRGYKEIVVEAAKHRNSEEMWRRMNLLTPEALAKLREEMRQCGVGPGFEQYAGQDACWVGLSYTVVAFTKQTVGFLDEALKLYCPELHTVLLESLVEVILVALQHVDYSLRCEQDPDKKAFILQNATFLYQAVLPAVERRFEDGVGRPARQLQDLRSGAWLVRVNPESTTSVV
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(700757..702859)
location: region:700757-702859:-1
so has part: feature:700757-702859:-1:exon

XP_028903535.1
type: Protein
SIO_000068: ncbiprotein

position:700757:-1
position: 700757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702859:-1
position: 702859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700757-702859:-1:exon

SPRTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 704537..710621
location: region:704537-710621:1
so has part: feature:704537-710621:1:exon
subclass of: SO_0000010

100088767
type: Gene
SIO_000068: ncbigene

position:704537:1
position: 704537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710621:1
position: 710621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704537-710621:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SPRTN
product: SprT-like N-terminal domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_029047141.2
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(704537..704831,706899..706998,707966..708094,709034..709301,709744..710621)
location: region:704537-710621:1
so has part: feature:704537-704831:1:exon
so has part: feature:706899-706998:1:exon
so has part: feature:707966-708094:1:exon
so has part: feature:709034-709301:1:exon
so has part: feature:709744-710621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704537-704831:1:exon

position:704831:1
position: 704831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706899-706998:1:exon

position:706899:1
position: 706899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706998:1
position: 706998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707966-708094:1:exon

position:707966:1
position: 707966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708094:1
position: 708094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709034-709301:1:exon

position:709034:1
position: 709034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709301:1
position: 709301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:709744-710621:1:exon

position:709744:1
position: 709744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent metalloprotease SPRTN
translation: MLGGRGGPERSGGMEAEELVLALQLQEEWDARAPAPPAPAPLSLVDASWELLDPTPDLRALFLLFNDRYFWGRLEAVEVKWSLRMTLCAGVCSYEGRGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTHNNKDREGHGPEFCKHMHRINRLTGANVTIYHSFHDEVDQYRQHWWRCDGPCRNRNPYFGYVKRATNRAPSAQDFWWEEHRRTCGGSYVKIKEPEGYAQKSKAKTRAPEQPPAPSGAGGTPSPHVGGSRPVTPFSGKGYLLGGSSGAPRPMSAWPGTGGLGGPEPAGPRAPRSGAPRPGGRQTVLNFPRVSVADRQTFCNVDGSPRKVPTGVARGSGSTGDGLPPKRPRLEDRAAFANYFTKKTPPSSPAGHGGAQPVPLPAPAPTVRCPVCQTQLPESQINTHLDSCLTG
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(704572..704831,706899..706998,707966..708094,709034..709301,709744..710264)
location: region:704572-710264:1
so has part: feature:704572-704831:1:exon
so has part: feature:706899-706998:1:exon
so has part: feature:707966-708094:1:exon
so has part: feature:709034-709301:1:exon
so has part: feature:709744-710264:1:exon

XP_028902974.1
type: Protein
SIO_000068: ncbiprotein

position:704572:1
position: 704572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710264:1
position: 710264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704572-704831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706899-706998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707966-708094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709034-709301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709744-710264:1:exon

EGLN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(711670..739226)
location: region:711670-739226:-1
so has part: feature:711670-739226:-1:exon
subclass of: SO_0000010

100092885
type: Gene
SIO_000068: ncbigene

position:711670:-1
position: 711670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739226:-1
position: 739226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711670-739226:-1:exon

EGLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: EGLN1
product: egl-9 family hypoxia inducible factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_029047142.2
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(711670..713848,714742..714809,715308..715444,718823..718942,738638..739226))
location: region:711670-739226:-1
so has part: feature:738638-739226:-1:exon
so has part: feature:718823-718942:-1:exon
so has part: feature:715308-715444:-1:exon
so has part: feature:714742-714809:-1:exon
so has part: feature:711670-713848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738638-739226:-1:exon

position:738638:-1
position: 738638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718823-718942:-1:exon

position:718823:-1
position: 718823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718942:-1
position: 718942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715308-715444:-1:exon

position:715308:-1
position: 715308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715444:-1
position: 715444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:714742-714809:-1:exon

position:714742:-1
position: 714742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714809:-1
position: 714809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:711670-713848:-1:exon

position:713848:-1
position: 713848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: EGLN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: egl nine homolog 1
translation: MADDSGGPGRLSPGERDRQYCELCGKMENLLRCARCRSSFYCSKEHQRQDWKKHKLSATATPAGRPRGSPGGPRPNGQTKPLPAGRLALEYIVPCLNKHGICVVDDFLGRETGQRIGDEVRALHDTGRFTDGQLVSQKSDSSKDIRGDQITWIEGKEPGCRAIGRLMSSMDDLIRHCNGRLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAFATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVL
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(713784..713848,714742..714809,715308..715444,718823..718942,738638..739211))
location: region:713784-739211:-1
so has part: feature:738638-739211:-1:exon
so has part: feature:718823-718942:-1:exon
so has part: feature:715308-715444:-1:exon
so has part: feature:714742-714809:-1:exon
so has part: feature:713784-713848:-1:exon

XP_028902975.2
type: Protein
SIO_000068: ncbiprotein

position:713784:-1
position: 713784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739211:-1
position: 739211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738638-739211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718823-718942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715308-715444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714742-714809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713784-713848:-1:exon

TSNAX
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 750356..762843
location: region:750356-762843:1
so has part: feature:750356-762843:1:exon
subclass of: SO_0000010

100092862
type: Gene
SIO_000068: ncbigene

position:750356:1
position: 750356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762843:1
position: 762843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750356-762843:1:exon

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TSNAX
product: translin associated factor X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_001513963.3
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(750356..750444,751132..751239,752848..752962,753701..753831,760037..760164,761168..762843)
location: region:750356-762843:1
so has part: feature:750356-750444:1:exon
so has part: feature:751132-751239:1:exon
so has part: feature:752848-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-762843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750356-750444:1:exon

position:750444:1
position: 750444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751132-751239:1:exon

position:751132:1
position: 751132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751239:1
position: 751239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752848-752962:1:exon

position:752848:1
position: 752848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752962:1
position: 752962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753701-753831:1:exon

position:753701:1
position: 753701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753831:1
position: 753831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760037-760164:1:exon

position:760037:1
position: 760037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760164:1
position: 760164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:761168-762843:1:exon

position:761168:1
position: 761168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TSNAX
product: translin associated factor X, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_007664731.2
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(750356..750444,751132..751239,752859..752962,753701..753831,760037..760164,761168..762843)
location: region:750356-762843:1
so has part: feature:750356-750444:1:exon
so has part: feature:751132-751239:1:exon
so has part: feature:752859-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-762843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750356-750444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751132-751239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752859-752962:1:exon

position:752859:1
position: 752859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761168-762843:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X2
translation: MSSKEGPGGFRKRKHDNFPHGPRREGKDDEGSSSPVLVSFKLFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDAEEILTESESKLEAVRQKMKQVAQELLGEDLHQFHRAITPGLQEYVEAVSFQHFIKTRSLISVEEINRQLVFAIEDPGEEERSLPPATQSGPPGPCSLQVTPVDYLLGVADLTGELMRLCISSVGNGDMDTPFEVSRFLRQVYDGFSFIGNTGPYEVSKKLYVLKQSLGKVENACYALKVRGSEIPKHMLADVFAAKADPIDREEGIA
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(750429..750444,751132..751239,752848..752962,753701..753831,760037..760164,761168..761545)
location: region:750429-761545:1
so has part: feature:750429-750444:1:exon
so has part: feature:751132-751239:1:exon
so has part: feature:752848-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-761545:1:exon

XP_001514013.1
type: Protein
SIO_000068: ncbiprotein

position:750429:1
position: 750429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761545:1
position: 761545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750429-750444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751132-751239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752848-752962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761168-761545:1:exon

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TSNAX
product: translin associated factor X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_029047603.1
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(751008..751239,752848..752962,753701..753831,760037..760164,761168..762843)
location: region:751008-762843:1
so has part: feature:751008-751239:1:exon
so has part: feature:752848-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-762843:1:exon

position:751008:1
position: 751008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751008-751239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752848-752962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761168-762843:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X1
translation: MEVGRERGETFFPGTGGSPASGVASKSQPKSCLLPLGPGGFRKRKHDNFPHGPRREGKDDEGSSSPVLVSFKLFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDAEEILTESESKLEAVRQKMKQVAQELLGEDLHQFHRAITPGLQEYVEAVSFQHFIKTRSLISVEEINRQLVFAIEDPGEEERSLPPATQSGPPGPCSLQVTPVDYLLGVADLTGELMRLCISSVGNGDMDTPFEVSRFLRQVYDGFSFIGNTGPYEVSKKLYVLKQSLGKVENACYALKVRGSEIPKHMLADVFAAKADPIDREEGIA
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(751023..751239,752848..752962,753701..753831,760037..760164,761168..761545)
location: region:751023-761545:1
so has part: feature:751023-751239:1:exon
so has part: feature:752848-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-761545:1:exon

XP_028903436.1
type: Protein
SIO_000068: ncbiprotein

position:751023:1
position: 751023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751023-751239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752848-752962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761168-761545:1:exon

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TSNAX
product: translin associated factor X, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_029047604.1
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(751113..751239,752859..752962,753701..753831,760037..760164,761168..762843)
location: region:751113-762843:1
so has part: feature:751113-751239:1:exon
so has part: feature:752859-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-762843:1:exon

position:751113:1
position: 751113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751113-751239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752859-752962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761168-762843:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X3
translation: MGREERGKTTRVRPRRCWSRLSELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDAEEILTESESKLEAVRQKMKQVAQELLGEDLHQFHRAITPGLQEYVEAVSFQHFIKTRSLISVEEINRQLVFAIEDPGEEERSLPPATQSGPPGPCSLQVTPVDYLLGVADLTGELMRLCISSVGNGDMDTPFEVSRFLRQVYDGFSFIGNTGPYEVSKKLYVLKQSLGKVENACYALKVRGSEIPKHMLADVFAAKADPIDREEGIA
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(751174..751239,752859..752962,753701..753831,760037..760164,761168..761545)
location: region:751174-761545:1
so has part: feature:751174-751239:1:exon
so has part: feature:752859-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-761545:1:exon

XP_028903437.1
type: Protein
SIO_000068: ncbiprotein

position:751174:1
position: 751174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751174-751239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752859-752962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761168-761545:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X3
translation: MGREERGKTTRVRPRRCWSRLSELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDAEEILTESESKLEAVRQKMKQVAQELLGEDLHQFHRAITPGLQEYVEAVSFQHFIKTRSLISVEEINRQLVFAIEDPGEEERSLPPATQSGPPGPCSLQVTPVDYLLGVADLTGELMRLCISSVGNGDMDTPFEVSRFLRQVYDGFSFIGNTGPYEVSKKLYVLKQSLGKVENACYALKVRGSEIPKHMLADVFAAKADPIDREEGIA
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(751174..751239,752859..752962,753701..753831,760037..760164,761168..761545)
location: region:751174-761545:1
so has part: feature:751174-751239:1:exon
so has part: feature:752859-752962:1:exon
so has part: feature:753701-753831:1:exon
so has part: feature:760037-760164:1:exon
so has part: feature:761168-761545:1:exon

XP_007662921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751174-751239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752859-752962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753701-753831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760037-760164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761168-761545:1:exon

LOC103169393
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC103169393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(753218..761168)
location: region:753218-761168:-1
so has part: feature:753218-761168:-1:exon
subclass of: SO_0000011

103169393
type: Gene
SIO_000068: ncbigene

position:753218:-1
position: 753218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761168:-1
position: 761168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753218-761168:-1:exon

LOC103169393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169393
product: uncharacterized LOC103169393, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003753752.2
SIO_010081: LOC103169393
subclass of: SO_0000673
so part of: LOC103169393
location: complement(join(753218..753990,757207..757325,758748..759756,759981..760454,760657..761168))
location: region:753218-761168:-1
so has part: feature:760657-761168:-1:exon
so has part: feature:759981-760454:-1:exon
so has part: feature:758748-759756:-1:exon
so has part: feature:757207-757325:-1:exon
so has part: feature:753218-753990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760657-761168:-1:exon

position:760657:-1
position: 760657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759981-760454:-1:exon

position:759981:-1
position: 759981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760454:-1
position: 760454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758748-759756:-1:exon

position:758748:-1
position: 758748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759756:-1
position: 759756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:757207-757325:-1:exon

position:757207:-1
position: 757207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757325:-1
position: 757325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753218-753990:-1:exon

position:753990:-1
position: 753990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103169393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC103169393
product: uncharacterized LOC103169393, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_485709.4
SIO_010081: LOC103169393
subclass of: SO_0000673
so part of: LOC103169393
location: complement(join(753218..753990,757207..757325,758748..760454,760657..761168))
location: region:753218-761168:-1
so has part: feature:760657-761168:-1:exon
so has part: feature:758748-760454:-1:exon
so has part: feature:757207-757325:-1:exon
so has part: feature:753218-753990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760657-761168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758748-760454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:757207-757325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753218-753990:-1:exon

DISC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 772244..785837
location: region:772244-785837:1
so has part: feature:772244-785837:1:exon
subclass of: SO_0000010

103165098
type: Gene
SIO_000068: ncbigene

position:772244:1
position: 772244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785837:1
position: 785837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772244-785837:1:exon

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: DISC1
product: DISC1 scaffold protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029047605.2
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(772244..772307,775068..775903,776167..776254,777730..777853,778505..778625,778780..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785837)
location: region:772244-785837:1
so has part: feature:772244-772307:1:exon
so has part: feature:775068-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778780-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:772244-772307:1:exon

position:772307:1
position: 772307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775068-775903:1:exon

position:775068:1
position: 775068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775903:1
position: 775903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776167-776254:1:exon

position:776167:1
position: 776167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776254:1
position: 776254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777730-777853:1:exon

position:777730:1
position: 777730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777853:1
position: 777853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778505-778625:1:exon

position:778505:1
position: 778505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778625:1
position: 778625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:778780-778958:1:exon

position:778780:1
position: 778780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778958:1
position: 778958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779928-779982:1:exon

position:779928:1
position: 779928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779982:1
position: 779982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:780287-780377:1:exon

position:780287:1
position: 780287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780377:1
position: 780377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:782160-782220:1:exon

position:782160:1
position: 782160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782220:1
position: 782220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:783816-783996:1:exon

position:783816:1
position: 783816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783996:1
position: 783996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:784472-784589:1:exon

position:784472:1
position: 784472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784589:1
position: 784589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:785532-785837:1:exon

position:785532:1
position: 785532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: DISC1
product: DISC1 scaffold protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029047607.2
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(772244..772307,775068..775903,776167..776254,777730..777853,778505..778625,778783..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785837)
location: region:772244-785837:1
so has part: feature:772244-772307:1:exon
so has part: feature:775068-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778783-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:772244-772307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775068-775903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776167-776254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777730-777853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778505-778625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778783-778958:1:exon

position:778783:1
position: 778783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779928-779982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:780287-780377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782160-782220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783816-783996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:784472-784589:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:785532-785837:1:exon

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disrupted in schizophrenia 1 protein isoform X1
translation: MVGGGRSSELTPDVRGWAPAAAPARRRKKLTRRPGYMRADFQPPSESRLPASRTPSSSSSPERGCPLRPEPVPRTGPCPWDSGSGRRTLPEADGPDGPPPPSPGGARWALQLEPEARPEAGGPGAVRPGETSSTGPWDAPEPPPATLGASDSSFSFIRQALLAAEERGEVEGRASPGARGPSLERARPGLPGPARGPERGGDPAGPPAEPGGAAPPRPTDPGTAAPAPDGGVRPPLGPLRLDSTAPGPARPPETPGRGSSGELAAEGRDPLTQKDEPAPQTCQHSKRAALWVGTLLGALWGRLRGRLEDGAAAKDDGSATETLRQEAEEEEAEALQLQPGARVFPEPVGGQLRGVTSGDAHLVDGGGLRPLPGKGSGPGSPAPAQLSAAGLSRLLHQRQRVQQEMVGLQARLRVLEAQEQRLRRAIADLGWDPQPGLGRAAGEVPVPTRVAPFGPEPPGIKGPRERDQTVHRPTRGTTAKVLTHQELCRAARDGEAAHPGLRGYQAEATAETGGQDNAVKCMKKPEDSLQSLGRQVLQTVREADLEASQLLIREFQLAEGCAGNAGREEREEEEEQVTAAAPLRAGGNLPEDLPLSAEELGGRCGAIREKLGLLEEELHEAMGTGDHSLVPVLGREVQAVKATLLALVVWLQPGAEAGREEAVGHLCRNGWDSSNAGWTG
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(772271..772307,775068..775903,776167..776254,777730..777853,778505..778625,778780..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785683)
location: region:772271-785683:1
so has part: feature:772271-772307:1:exon
so has part: feature:775068-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778780-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785683:1:exon

XP_028903438.1
type: Protein
SIO_000068: ncbiprotein

position:772271:1
position: 772271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785683:1
position: 785683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772271-772307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775068-775903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776167-776254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777730-777853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778505-778625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778780-778958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779928-779982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:780287-780377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782160-782220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783816-783996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:784472-784589:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:785532-785683:1:exon

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disrupted in schizophrenia 1 protein isoform X2
translation: MVGGGRSSELTPDVRGWAPAAAPARRRKKLTRRPGYMRADFQPPSESRLPASRTPSSSSSPERGCPLRPEPVPRTGPCPWDSGSGRRTLPEADGPDGPPPPSPGGARWALQLEPEARPEAGGPGAVRPGETSSTGPWDAPEPPPATLGASDSSFSFIRQALLAAEERGEVEGRASPGARGPSLERARPGLPGPARGPERGGDPAGPPAEPGGAAPPRPTDPGTAAPAPDGGVRPPLGPLRLDSTAPGPARPPETPGRGSSGELAAEGRDPLTQKDEPAPQTCQHSKRAALWVGTLLGALWGRLRGRLEDGAAAKDDGSATETLRQEAEEEEAEALQLQPGARVFPEPVGGQLRGVTSGDAHLVDGGGLRPLPGKGSGPGSPAPAQLSAAGLSRLLHQRQRVQEMVGLQARLRVLEAQEQRLRRAIADLGWDPQPGLGRAAGEVPVPTRVAPFGPEPPGIKGPRERDQTVHRPTRGTTAKVLTHQELCRAARDGEAAHPGLRGYQAEATAETGGQDNAVKCMKKPEDSLQSLGRQVLQTVREADLEASQLLIREFQLAEGCAGNAGREEREEEEEQVTAAAPLRAGGNLPEDLPLSAEELGGRCGAIREKLGLLEEELHEAMGTGDHSLVPVLGREVQAVKATLLALVVWLQPGAEAGREEAVGHLCRNGWDSSNAGWTG
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(772271..772307,775068..775903,776167..776254,777730..777853,778505..778625,778783..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785683)
location: region:772271-785683:1
so has part: feature:772271-772307:1:exon
so has part: feature:775068-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778783-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785683:1:exon

XP_028903440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:772271-772307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775068-775903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776167-776254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777730-777853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778505-778625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778783-778958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779928-779982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:780287-780377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782160-782220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783816-783996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:784472-784589:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:785532-785683:1:exon

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: DISC1
product: DISC1 scaffold protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029047608.1
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(773872..774923,775068..775903,776167..776254,777730..777853,778505..778625,778780..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785837)
location: region:773872-785837:1
so has part: feature:773872-774923:1:exon
so has part: feature:775068-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778780-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785837:1:exon

position:773872:1
position: 773872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773872-774923:1:exon

position:774923:1
position: 774923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775068-775903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776167-776254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777730-777853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778505-778625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778780-778958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779928-779982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:780287-780377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782160-782220:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783816-783996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:784472-784589:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:785532-785837:1:exon

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disrupted in schizophrenia 1 protein isoform X3
translation: MRADFQPPSESRLPASRTPSSSSSPERGCPLRPEPVPRTGPCPWDSGSGRRTLPEADGPDGPPPPSPGGARWALQLEPEARPEAGGPGAVRPGETSSTGPWDAPEPPPATLGASDSSFSFIRQALLAAEERGEVEGRASPGARGPSLERARPGLPGPARGPERGGDPAGPPAEPGGAAPPRPTDPGTAAPAPDGGVRPPLGPLRLDSTAPGPARPPETPGRGSSGELAAEGRDPLTQKDEPAPQTCQHSKRAALWVGTLLGALWGRLRGRLEDGAAAKDDGSATETLRQEAEEEEAEALQLQPGARVFPEPVGGQLRGVTSGDAHLVDGGGLRPLPGKGSGPGSPAPAQLSAAGLSRLLHQRQRVQQEMVGLQARLRVLEAQEQRLRRAIADLGWDPQPGLGRAAGEVPVPTRVAPFGPEPPGIKGPRERDQTVHRPTRGTTAKVLTHQELCRAARDGEAAHPGLRGYQAEATAETGGQDNAVKCMKKPEDSLQSLGRQVLQTVREADLEASQLLIREFQLAEGCAGNAGREEREEEEEQVTAAAPLRAGGNLPEDLPLSAEELGGRCGAIREKLGLLEEELHEAMGTGDHSLVPVLGREVQAVKATLLALVVWLQPGAEAGREEAVGHLCRNGWDSSNAGWTG
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(775139..775903,776167..776254,777730..777853,778505..778625,778780..778958,779928..779982,780287..780377,782160..782220,783816..783996,784472..784589,785532..785683)
location: region:775139-785683:1
so has part: feature:775139-775903:1:exon
so has part: feature:776167-776254:1:exon
so has part: feature:777730-777853:1:exon
so has part: feature:778505-778625:1:exon
so has part: feature:778780-778958:1:exon
so has part: feature:779928-779982:1:exon
so has part: feature:780287-780377:1:exon
so has part: feature:782160-782220:1:exon
so has part: feature:783816-783996:1:exon
so has part: feature:784472-784589:1:exon
so has part: feature:785532-785683:1:exon

XP_028903441.1
type: Protein
SIO_000068: ncbiprotein

position:775139:1
position: 775139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775139-775903:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776167-776254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777730-777853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778505-778625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778780-778958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779928-779982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:780287-780377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:782160-782220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783816-783996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:784472-784589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:785532-785683:1:exon

SIPA1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(791520..827042)
location: region:791520-827042:-1
so has part: feature:791520-827042:-1:exon
subclass of: SO_0000010

100073785
type: Gene
SIO_000068: ncbigene

position:791520:-1
position: 791520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827042:-1
position: 827042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791520-827042:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029047381.2
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(791520..792368,792676..792757,793063..793186,793420..793473,794086..794202,795679..795877,796092..796245,796468..796692,796928..797268,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808769,826940..827042))
location: region:791520-827042:-1
so has part: feature:826940-827042:-1:exon
so has part: feature:807132-808769:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797268:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793420-793473:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:791520-792368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826940-827042:-1:exon

position:826940:-1
position: 826940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807132-808769:-1:exon

position:807132:-1
position: 807132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808769:-1
position: 808769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805680-805813:-1:exon

position:805680:-1
position: 805680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805813:-1
position: 805813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804540-804728:-1:exon

position:804540:-1
position: 804540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804728:-1
position: 804728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803986-804160:-1:exon

position:803986:-1
position: 803986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804160:-1
position: 804160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803044-803147:-1:exon

position:803044:-1
position: 803044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803147:-1
position: 803147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:802503-802660:-1:exon

position:802503:-1
position: 802503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802660:-1
position: 802660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:800534-801113:-1:exon

position:800534:-1
position: 800534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801113:-1
position: 801113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:799788-800326:-1:exon

position:799788:-1
position: 799788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800326:-1
position: 800326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:798934-799017:-1:exon

position:798934:-1
position: 798934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799017:-1
position: 799017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:798302-798396:-1:exon

position:798302:-1
position: 798302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798396:-1
position: 798396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:797712-797815:-1:exon

position:797712:-1
position: 797712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797815:-1
position: 797815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:796928-797268:-1:exon

position:796928:-1
position: 796928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797268:-1
position: 797268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:796468-796692:-1:exon

position:796468:-1
position: 796468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796692:-1
position: 796692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:796092-796245:-1:exon

position:796092:-1
position: 796092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796245:-1
position: 796245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:795679-795877:-1:exon

position:795679:-1
position: 795679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795877:-1
position: 795877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:794086-794202:-1:exon

position:794086:-1
position: 794086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794202:-1
position: 794202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:793420-793473:-1:exon

position:793420:-1
position: 793420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793473:-1
position: 793473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:793063-793186:-1:exon

position:793063:-1
position: 793063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793186:-1
position: 793186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:792676-792757:-1:exon

position:792676:-1
position: 792676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792757:-1
position: 792757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:791520-792368:-1:exon

position:792368:-1
position: 792368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029047382.2
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(791520..792368,792676..792757,793063..793186,794086..794202,795679..795877,796092..796245,796468..796692,796928..797271,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808769,826940..827042))
location: region:791520-827042:-1
so has part: feature:826940-827042:-1:exon
so has part: feature:807132-808769:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797271:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:791520-792368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826940-827042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807132-808769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805680-805813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804540-804728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803986-804160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803044-803147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802503-802660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800534-801113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799788-800326:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798934-799017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798302-798396:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797712-797815:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796928-797271:-1:exon

position:797271:-1
position: 797271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:796468-796692:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:796092-796245:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:795679-795877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794086-794202:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793063-793186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:792676-792757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:791520-792368:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029047379.2
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(791520..792368,792676..792757,793063..793186,793420..793473,794086..794202,795679..795877,796092..796245,796468..796692,796928..797271,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808769,826940..827042))
location: region:791520-827042:-1
so has part: feature:826940-827042:-1:exon
so has part: feature:807132-808769:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797271:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793420-793473:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:791520-792368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826940-827042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807132-808769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805680-805813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804540-804728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803986-804160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803044-803147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802503-802660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800534-801113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799788-800326:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798934-799017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798302-798396:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797712-797815:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796928-797271:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796468-796692:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:796092-796245:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:795679-795877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794086-794202:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793420-793473:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:793063-793186:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:792676-792757:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:791520-792368:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X2
translation: MSDPPRPGRAPPGFQDPGPRAAPADDYFARKFRAPNGGPGPPAPLAAAPRGESGSPANGTPAVPKMGVRARVSEWPPRKDGAKEPGGRAPRESREAAAGYGGAEAAPPDVAPRAAGPPLGDAFGPAPPRGLHPVRQRSNSDVTLSDLDADEALGPRAAKPGPGAPLRREYGSTSSIDRQGLAAAECFLAGLRGGRAEGPRGPPDLFPRPVRGPAPLVSPSLHAAARISRGELARLAGLDRPDTGAPPAPGERGPSGPRRPRAEPAEPSLFRRLRAARSEPEAPGKPPDGGGVARPCSRHRCFAHYDVQSILFDIDQAVIARANAGKRKNLATGASAASQAGATGGGGGSPLGSREDLNSRESPEADPGDGKSNELLLSCPHFRNETGGEGERRIGLSRASAAPRAAGEGGSFESSLSSHCTNAGVSVLEVPRESQLLPREKVKRYIIEHVDLGAYYYRKFFYGKEHQNYFGTDENLGPVAVSIRREKVDDAKDKEGSQFHYRVVFRTSELTTLRGAILEDAVPCSGRPGPARGLPAREVLECLVPELGLHCLRLAVGSPSVSEQLLRLDEQGLSFQHKVGILYCRAGQGSEEEMYNNEAAGPAFDQFLDLLGQRVRLRGFTKYRAQLDTKTDSTGTHSLYTTYKDYELMFHVCTMLPFMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPQTVRSHFQHVFVIVRVHHPCTENVCYSIGVSRSRDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRLEYLRDLAENSVTAATLDASSAKFSFITLGAKRREKARPRPDAHLASAGAVTWSVVARDYGRSADIACLLGVSGEFFVLVERESKDVVFNCSCRDVIGWTSGWTSVKVFYERGQCVLLSAADRRGDDVREVVRRLEIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVSTLTHEQMIDLLRTSVTVKVVIIHPHEDGSPRRGCSELCRVPLVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPAPAGQPPARVSPGLGPPDGIPAQQLQRHSRAALPRSTSFDRKLPDGARSSPSNQSSSSDPGPSGSSHWRQPIGYDGCQSPLLQELQGPPECEGAREQEEILDGTRHPEIKWPGLPPAVLSSYSEPTLQKEGSVHDCPHKLSLIGERACSSCAGSSSSDGSTASGHSEDRALDAADLLDADPRGQPSYGKGAPSDGGEADPAPRPPSALLGPVHLPARVEPWAEPAAGPGLEREPTPGSPGPGASDGDFSPASSLSSGSQRSGSPAARCPKSGGSLDTSKVYIVSHGGGQQAAGSAARPFHRLGAGGAYVIGWKRSESSPTPEEVEAVECQGLCGGMDGLCVPSVPEVEEDHGPPDGQRGLAKDDLLKLLFPGSPGREEGWRKFSVSGSPSPRRSLYRTLSDESVSSVRRDSRSSVLDQALPNDILFSTTPPYLSTLPPRSAPPPPGLAGEFWLSDTSGFTDPRLMPLPDAASGLDWSHLVDAARAFEGLDSDEELRLDCPHTSCLDRRAASFCSLTDLEAGQDPDEPQECVLGEDPADEAHFVDGPGEAVSSTLTGKVNQLELILRQLQTDLRKEKQDKAALQAEVQHLRRDNQRLQEESQAATAQLRKFTDWFFNTVDRKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(792222..792368,792676..792757,793063..793186,793420..793473,794086..794202,795679..795877,796092..796245,796468..796692,796928..797268,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808524))
location: region:792222-808524:-1
so has part: feature:807132-808524:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797268:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793420-793473:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:792222-792368:-1:exon

XP_028903214.1
type: Protein
SIO_000068: ncbiprotein

position:792222:-1
position: 792222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808524:-1
position: 808524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807132-808524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805680-805813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804540-804728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803986-804160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803044-803147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802503-802660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800534-801113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799788-800326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798934-799017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798302-798396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:797712-797815:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:796928-797268:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796468-796692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796092-796245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795679-795877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794086-794202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793420-793473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793063-793186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:792676-792757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:792222-792368:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X3
translation: MSDPPRPGRAPPGFQDPGPRAAPADDYFARKFRAPNGGPGPPAPLAAAPRGESGSPANGTPAVPKMGVRARVSEWPPRKDGAKEPGGRAPRESREAAAGYGGAEAAPPDVAPRAAGPPLGDAFGPAPPRGLHPVRQRSNSDVTLSDLDADEALGPRAAKPGPGAPLRREYGSTSSIDRQGLAAAECFLAGLRGGRAEGPRGPPDLFPRPVRGPAPLVSPSLHAAARISRGELARLAGLDRPDTGAPPAPGERGPSGPRRPRAEPAEPSLFRRLRAARSEPEAPGKPPDGGGVARPCSRHRCFAHYDVQSILFDIDQAVIARANAGKRKNLATGASAASQAGATGGGGGSPLGSREDLNSRESPEADPGDGKSNELLLSCPHFRNETGGEGERRIGLSRASAAPRAAGEGGSFESSLSSHCTNAGVSVLEVPRESQLLPREKVKRYIIEHVDLGAYYYRKFFYGKEHQNYFGTDENLGPVAVSIRREKVDDAKDKEGSQFHYRVVFRTSELTTLRGAILEDAVPCSGRPGPARGLPAREVLECLVPELGLHCLRLAVGSPSVSEQLLRLDEQGLSFQHKVGILYCRAGQGSEEEMYNNEAAGPAFDQFLDLLGQRVRLRGFTKYRAQLDTKTDSTGTHSLYTTYKDYELMFHVCTMLPFMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPQTVRSHFQHVFVIVRVHHPCTENVCYSIGVSRSRDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRLEYLRDLAENSVTAATLDASSAKFSFITLGAKRREKARPRPDAHLASAGAVTWSVVARDYGRSADIACLLGVSGEFFVLVERESKDVVFNCSCRDVIGWTSGWTSVKVFYERGQCVLLSAADRRGDDVREVVRRLEIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVSTLTHEQMIDLLRTSVTVKVVIIHPHEDGSPRRGCSELCRVPLVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPAPAGQPPARVSPGLGPPDGIPAQQLQRHSRAALPRSTSFDRKLPDGARSSPSNQSSSSDPGPSGSSHWRQPIGYDGCQSPLLQELQGPPECEGAREQEEILDGTRHPEIKWPGLPPAVLSSYSEPTLQKEGSVHDCPHKLSLQIGERACSSCAGSSSSDGSTASGHSEDRALDAADLLDADPRGQPSYGKGAPSDGGEADPAPRPPSALLGPVHLPARVEPWAEPAAGPGLEREPTPGSPGPGASDGDFSPASSLSSGSQRSGSPAARCPKSGGSLDTSKVYIVSHGGGQQAAGSAARPFHRLGAGGAYVIGWKRSESSPTPEEVEAVECQGLCGGMDGLCVPSVPEVEEDHGPPDGQRGLAKDDLLKLLFPGSPGREEGWRKFSVSGSPSPRRSLYRTLSDESVSSVRRDSRSSVLDQALPNDILFSTTPPYLSTLPPRSAPPPPGLAGEFWLSDTSGFTDPRLMPLPDAASGLDWSHLVDAARAFEDRRAASFCSLTDLEAGQDPDEPQECVLGEDPADEAHFVDGPGEAVSSTLTGKVNQLELILRQLQTDLRKEKQDKAALQAEVQHLRRDNQRLQEESQAATAQLRKFTDWFFNTVDRKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(792222..792368,792676..792757,793063..793186,794086..794202,795679..795877,796092..796245,796468..796692,796928..797271,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808524))
location: region:792222-808524:-1
so has part: feature:807132-808524:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797271:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:792222-792368:-1:exon

XP_028903215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:807132-808524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805680-805813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804540-804728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803986-804160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803044-803147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802503-802660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800534-801113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799788-800326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798934-799017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798302-798396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:797712-797815:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:796928-797271:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796468-796692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796092-796245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795679-795877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794086-794202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793063-793186:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:792676-792757:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:792222-792368:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X1
translation: MSDPPRPGRAPPGFQDPGPRAAPADDYFARKFRAPNGGPGPPAPLAAAPRGESGSPANGTPAVPKMGVRARVSEWPPRKDGAKEPGGRAPRESREAAAGYGGAEAAPPDVAPRAAGPPLGDAFGPAPPRGLHPVRQRSNSDVTLSDLDADEALGPRAAKPGPGAPLRREYGSTSSIDRQGLAAAECFLAGLRGGRAEGPRGPPDLFPRPVRGPAPLVSPSLHAAARISRGELARLAGLDRPDTGAPPAPGERGPSGPRRPRAEPAEPSLFRRLRAARSEPEAPGKPPDGGGVARPCSRHRCFAHYDVQSILFDIDQAVIARANAGKRKNLATGASAASQAGATGGGGGSPLGSREDLNSRESPEADPGDGKSNELLLSCPHFRNETGGEGERRIGLSRASAAPRAAGEGGSFESSLSSHCTNAGVSVLEVPRESQLLPREKVKRYIIEHVDLGAYYYRKFFYGKEHQNYFGTDENLGPVAVSIRREKVDDAKDKEGSQFHYRVVFRTSELTTLRGAILEDAVPCSGRPGPARGLPAREVLECLVPELGLHCLRLAVGSPSVSEQLLRLDEQGLSFQHKVGILYCRAGQGSEEEMYNNEAAGPAFDQFLDLLGQRVRLRGFTKYRAQLDTKTDSTGTHSLYTTYKDYELMFHVCTMLPFMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPQTVRSHFQHVFVIVRVHHPCTENVCYSIGVSRSRDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRLEYLRDLAENSVTAATLDASSAKFSFITLGAKRREKARPRPDAHLASAGAVTWSVVARDYGRSADIACLLGVSGEFFVLVERESKDVVFNCSCRDVIGWTSGWTSVKVFYERGQCVLLSAADRRGDDVREVVRRLEIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVSTLTHEQMIDLLRTSVTVKVVIIHPHEDGSPRRGCSELCRVPLVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPAPAGQPPARVSPGLGPPDGIPAQQLQRHSRAALPRSTSFDRKLPDGARSSPSNQSSSSDPGPSGSSHWRQPIGYDGCQSPLLQELQGPPECEGAREQEEILDGTRHPEIKWPGLPPAVLSSYSEPTLQKEGSVHDCPHKLSLQIGERACSSCAGSSSSDGSTASGHSEDRALDAADLLDADPRGQPSYGKGAPSDGGEADPAPRPPSALLGPVHLPARVEPWAEPAAGPGLEREPTPGSPGPGASDGDFSPASSLSSGSQRSGSPAARCPKSGGSLDTSKVYIVSHGGGQQAAGSAARPFHRLGAGGAYVIGWKRSESSPTPEEVEAVECQGLCGGMDGLCVPSVPEVEEDHGPPDGQRGLAKDDLLKLLFPGSPGREEGWRKFSVSGSPSPRRSLYRTLSDESVSSVRRDSRSSVLDQALPNDILFSTTPPYLSTLPPRSAPPPPGLAGEFWLSDTSGFTDPRLMPLPDAASGLDWSHLVDAARAFEGLDSDEELRLDCPHTSCLDRRAASFCSLTDLEAGQDPDEPQECVLGEDPADEAHFVDGPGEAVSSTLTGKVNQLELILRQLQTDLRKEKQDKAALQAEVQHLRRDNQRLQEESQAATAQLRKFTDWFFNTVDRKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(792222..792368,792676..792757,793063..793186,793420..793473,794086..794202,795679..795877,796092..796245,796468..796692,796928..797271,797712..797815,798302..798396,798934..799017,799788..800326,800534..801113,802503..802660,803044..803147,803986..804160,804540..804728,805680..805813,807132..808524))
location: region:792222-808524:-1
so has part: feature:807132-808524:-1:exon
so has part: feature:805680-805813:-1:exon
so has part: feature:804540-804728:-1:exon
so has part: feature:803986-804160:-1:exon
so has part: feature:803044-803147:-1:exon
so has part: feature:802503-802660:-1:exon
so has part: feature:800534-801113:-1:exon
so has part: feature:799788-800326:-1:exon
so has part: feature:798934-799017:-1:exon
so has part: feature:798302-798396:-1:exon
so has part: feature:797712-797815:-1:exon
so has part: feature:796928-797271:-1:exon
so has part: feature:796468-796692:-1:exon
so has part: feature:796092-796245:-1:exon
so has part: feature:795679-795877:-1:exon
so has part: feature:794086-794202:-1:exon
so has part: feature:793420-793473:-1:exon
so has part: feature:793063-793186:-1:exon
so has part: feature:792676-792757:-1:exon
so has part: feature:792222-792368:-1:exon

XP_028903212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:807132-808524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805680-805813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804540-804728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803986-804160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803044-803147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802503-802660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800534-801113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799788-800326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798934-799017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798302-798396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:797712-797815:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:796928-797271:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796468-796692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796092-796245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795679-795877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794086-794202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793420-793473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793063-793186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:792676-792757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:792222-792368:-1:exon

MAP10
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 851617..854197
location: region:851617-854197:1
so has part: feature:851617-854197:1:exon
subclass of: SO_0000010

103169411
type: Gene
SIO_000068: ncbigene

position:851617:1
position: 851617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854197:1
position: 854197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851617-854197:1:exon

MAP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: MAP10
product: microtubule associated protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047632.2
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 851617..854197
location: region:851617-854197:1
so has part: feature:851617-854197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:851617-854197:1:exon

MAP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 10
translation: MATAPERLFALELLVERVRLEGRGPPAPRGSRLAVAFHPPDLPRLSVAAPPAPCPRPGLFPFGRGKSCLVRLGPAALVRLLGGAPLCALLLAPPAGAAAAPRLLGACRVSLATALGGHRGRYALRDHAGARVGDIALAFRLTELGVCPPGRLLREALPPASDPRDQPARPVDAEEPKPEGGGGPRLTGDARPGVVHPPRGRTGRDPDGMEQEMETDTFRPPPLFYTRAAGVDTTPTARHGGPGMAGEAEVGLREEAVPRPPTRNQAGAPGTAGEAAAGVGPRPAPGLRPDGLRPDGLRPDGLRRLPLLRELLRELALLDGQLGDGSPRPAWVVQDAATEAPEFPARPAGRPVRRGRERPPGLPPERDGGRGQVPTASPLRAGEGPEDGTRPEKARGARGDGPPGKKPVFGLTKTLRLRLGQANPEVLLLHERREQAKKKRVETLRGRKFGSPAPRGKPFRPAEDNWEPVGSSGPIGNSDPIPPWGERGGTLAPSEGEADGRGPPKGAEDRRIEAQTGSSGEGAEVANKSSPRGGASRTPGAVRSAPGTDAAAPPPGASPPDAGIQRDTIVQEVGDGPSQVKDPGFTGPSPEGNGPREASPSERYSDDFTSSCSSGALSSADAGGGESGTLRVCPELEGANPESADAEADSQASASGTPGNTCGNEGTSAPLPPLSAASWSPSSSGTPRVASSAAPSPAAGVGRSGQSDPSPIWGRDDGRAAAPREHRNTGAESRRGMLGCQEATRWARALETSQSLRSSLVSSYVPTSSMSEEEVSAPDSPSSILSGEGVDKLGSLMLSSQYKDIRELVIDKLPGYTV
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 851617..854073
location: region:851617-854073:1
so has part: feature:851617-854073:1:exon

XP_028903465.2
type: Protein
SIO_000068: ncbiprotein

position:854073:1
position: 854073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851617-854073:1:exon

NTPCR
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 865624..870032
location: region:865624-870032:1
so has part: feature:865624-870032:1:exon
subclass of: SO_0000010

114805627
type: Gene
SIO_000068: ncbigene

position:865624:1
position: 865624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870032:1
position: 870032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865624-870032:1:exon

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_029046902.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(865624..865708,867256..867418,868374..868470,868587..868802,869544..870032)
location: region:865624-870032:1
so has part: feature:865624-865708:1:exon
so has part: feature:867256-867418:1:exon
so has part: feature:868374-868470:1:exon
so has part: feature:868587-868802:1:exon
so has part: feature:869544-870032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865624-865708:1:exon

position:865708:1
position: 865708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867256-867418:1:exon

position:867256:1
position: 867256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867418:1
position: 867418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868374-868470:1:exon

position:868374:1
position: 868374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868470:1
position: 868470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:868587-868802:1:exon

position:868587:1
position: 868587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868802:1
position: 868802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:869544-870032:1:exon

position:869544:1
position: 869544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase
translation: MAPHVFLTGSPGVGKTTLVRKAVGALEAAGVPADGFYTEEVRRAGRRVGFDVVTLSGLRGPLSRVSSDLSPGSRAPRVGQYVVDVASLERLALPTLSPVAAGDSGTVGKKVCVVDEVGKMELCSEAFVQSVRRVLSAPRLVILGSIPLPKGRPLGLVEEIRARRDVTLFVVTKENRDQILDDIVAAVRGCRD
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(865675..865708,867256..867418,868374..868470,868587..868802,869544..869612)
location: region:865675-869612:1
so has part: feature:865675-865708:1:exon
so has part: feature:867256-867418:1:exon
so has part: feature:868374-868470:1:exon
so has part: feature:868587-868802:1:exon
so has part: feature:869544-869612:1:exon

XP_028902735.1
type: Protein
SIO_000068: ncbiprotein

position:865675:1
position: 865675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869612:1
position: 869612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865675-865708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867256-867418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868374-868470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:868587-868802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869544-869612:1:exon

PCNX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870686..901637)
location: region:870686-901637:-1
so has part: feature:870686-901637:-1:exon
subclass of: SO_0000010

100073639
type: Gene
SIO_000068: ncbigene

position:870686:-1
position: 870686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901637:-1
position: 901637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870686-901637:-1:exon

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PCNX2
product: pecanex 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029047595.2
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 18
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SIO_000300: 29
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PCNX2
product: pecanex 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029047592.2
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(870686..871694,871967..872415,873102..873304,873822..874096,875067..875297,876033..876177,876289..876392,876821..877054,877460..877713,879366..879584,880485..880543,881454..881583,881697..881805,881943..882120,882342..882483,883000..883150,883490..883582,883783..883879,884561..884670,885942..886033,886954..887064,888005..888176,888894..888926,889436..889589,890699..890841,891278..891413,891925..892018,892332..892477,892968..893091,893629..894766,896828..896951,897589..897794,901449..901637))
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urn:…
SIO_000300: 1
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SIO_000300: 8
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urn:…
SIO_000300: 20
SIO_000628: feature:881943-882120:-1:exon

position:882120:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:881697-881805:-1:exon

urn:…
SIO_000300: 22
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SIO_000300: 26
SIO_000628: feature:876821-877054:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876289-876392:-1:exon

position:876392:-1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:876033-876177:-1:exon

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SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:873822-874096:-1:exon

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SIO_000300: 31
SIO_000628: feature:873102-873304:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:871967-872415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:870686-871694:-1:exon

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: PCNX2
product: pecanex 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029047591.2
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(870686..871694,871967..872415,873102..873304,873822..874096,875067..875297,876033..876177,876289..876395,876821..877054,877460..877713,879366..879584,880485..880543,881454..881583,881697..881805,881943..882120,882342..882483,883000..883150,883490..883582,883783..883879,884561..884670,885942..886033,886954..887064,888005..888176,888894..888926,889436..889589,890699..890841,891278..891413,891925..892018,892332..892477,892968..893091,893629..894766,896828..896951,897589..897794,901449..901637))
location: region:870686-901637:-1
so has part: feature:901449-901637:-1:exon
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:886954-887064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885942-886033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884561-884670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:883783-883879:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:883490-883582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883000-883150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:882342-882483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:881943-882120:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881697-881805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881454-881583:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:880485-880543:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879366-879584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:877460-877713:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:876821-877054:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876289-876395:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876033-876177:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875067-875297:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:873822-874096:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:873102-873304:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:871967-872415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:870686-871694:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X3
translation: MVSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRAQKDSRKPRSGATLPAESPSNKRLARRQREGARWDSCTPPLRCSSRGHSLNSHSWSGSGPSERQEPEAAEDPLGARSVPSSACSAGPVGGREPGPRATPPGPPPGITGCAERPATATPPATAEPRSPAHGGSDPVVPAPGEKGPGAEGDDPQSLLADGGERREPRGDCGHEGSRSPSPLAGASGDLDDSEGEVAVTLVDNSVPGDPLCPHEPVRIVVTMSGGPSSGAGTAGGHEPGRDDSQSDLEPTGATPSAGRPLRIPLIKFQLPDRGDVPQRSGPGDEAPDSAPEGGGGGADHAPFLDPDDEAGPDTPAPRRARGQRQARGLSVDSGTDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAVGVPSGLPVGVPTDIPTGVPNGAVTEPPQESRLRERSVDRSALPRVGEEHSSAHCGGGGGPLEKKEEILERGKPRDRPPKPGKSDVRSQDRPSALPSQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEDSVGAVHVFIGEHGEIRSCYLKAGTQKEGPPRPQGPSSDRVCSVQETLFSSPSSTPSASLEPPSGDPAASALQQQLLLLVARRTQSDRPRPCQDPEDYSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSLLGFVTLSRGFCKDLWALQFCLVMASCQYSLLKSVQPDPASPVHGYNQIITYSRPAYFCVLCALILLLDAGSTSRPPPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDMLVFGGSAVTGGLAAVYGVARSLLTAVGLNAFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLLCPAWAESPSDPLPEKMRESVKEILKSDLIMCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKLVLYPAVALHGLTVDAFAMSVRRVPATRGASESFLLNFLVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGADQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVETGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADQGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARTQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLKPLQPYAKWHHIERDPALFSLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQEQRLDSDEDSPLVTLCFALCIMGRRTLGVAAHNMAVSLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAVLFEAMGAFESTVVVCHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRRAYLTFKVIKVNRECVRGLWAGQQQELIFLRNRNPERGSIQNHRQVLRNLINSSCDQPLGYPVYVSPLITSFLGSHDQLGRVWGGPAGLSRLGAWLRVRWRRMQKDCHAGHRGSGHIEEGDGSRGGGARGTSGSSEYSSGSTSRHGSAEQPRKASSPWQAAARDGPRHAGRKKGRSRPVQAGPGQRPAPPGLSGPAPGGQQSVLQTSTSAQEMARRPSGSRQSWCSSAASLQSQPAAPGAPLPPAAPGPARGRAGGPPASSLGSSSTSSTLSLLFGKRSLSSVLVISGLSAADGGNTSDTLSSSSVNIAAGPSARAAAQQLSDVTDGSEPARPAARVPGAGPAAGGQGGLCRRAS…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(871527..871694,871967..872415,873102..873304,873822..874096,875067..875297,876033..876177,876289..876395,876821..877054,877460..877713,879366..879584,880485..880543,881454..881583,881697..881805,881943..882000,882342..882483,883000..883150,883490..883582,883783..883879,884561..884670,885942..886033,886954..887064,888005..888176,888894..888926,889436..889589,890699..890841,891278..891413,891925..892018,892332..892477,892968..893091,893629..894766,896828..896951,897589..897794,901449..901601))
location: region:871527-901601:-1
so has part: feature:901449-901601:-1:exon
so has part: feature:897589-897794:-1:exon
so has part: feature:896828-896951:-1:exon
so has part: feature:893629-894766:-1:exon
so has part: feature:892968-893091:-1:exon
so has part: feature:892332-892477:-1:exon
so has part: feature:891925-892018:-1:exon
so has part: feature:891278-891413:-1:exon
so has part: feature:890699-890841:-1:exon
so has part: feature:889436-889589:-1:exon
so has part: feature:888894-888926:-1:exon
so has part: feature:888005-888176:-1:exon
so has part: feature:886954-887064:-1:exon
so has part: feature:885942-886033:-1:exon
so has part: feature:884561-884670:-1:exon
so has part: feature:883783-883879:-1:exon
so has part: feature:883490-883582:-1:exon
so has part: feature:883000-883150:-1:exon
so has part: feature:882342-882483:-1:exon
so has part: feature:881943-882000:-1:exon
so has part: feature:881697-881805:-1:exon
so has part: feature:881454-881583:-1:exon
so has part: feature:880485-880543:-1:exon
so has part: feature:879366-879584:-1:exon
so has part: feature:877460-877713:-1:exon
so has part: feature:876821-877054:-1:exon
so has part: feature:876289-876395:-1:exon
so has part: feature:876033-876177:-1:exon
so has part: feature:875067-875297:-1:exon
so has part: feature:873822-874096:-1:exon
so has part: feature:873102-873304:-1:exon
so has part: feature:871967-872415:-1:exon
so has part: feature:871527-871694:-1:exon

XP_028903428.1
type: Protein
SIO_000068: ncbiprotein

position:871527:-1
position: 871527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901601:-1
position: 901601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901449-901601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897589-897794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896828-896951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893629-894766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892968-893091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892332-892477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891925-892018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891278-891413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890699-890841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889436-889589:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888894-888926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888005-888176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886954-887064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885942-886033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884561-884670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:883783-883879:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:883490-883582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883000-883150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:882342-882483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:881943-882000:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881697-881805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881454-881583:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:880485-880543:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879366-879584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:877460-877713:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:876821-877054:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876289-876395:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876033-876177:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875067-875297:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:873822-874096:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:873102-873304:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:871967-872415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:871527-871694:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X2
translation: MVSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRAQKDSRKPRSGATLPAESPSNKRLARRQREGARWDSCTPPLRCSSRGHSLNSHSWSGSGPSERQEPEAAEDPLGARSVPSSACSAGPVGGREPGPRATPPGPPPGITGCAERPATATPPATAEPRSPAHGGSDPVVPAPGEKGPGAEGDDPQSLLADGGERREPRGDCGHEGSRSPSPLAGASGDLDDSEGEVAVTLVDNSVPGDPLCPHEPVRIVVTMSGGPSSGAGTAGGHEPGRDDSQSDLEPTGATPSAGRPLRIPLIKFQLPDRGDVPQRSGPGDEAPDSAPEGGGGGADHAPFLDPDDEAGPDTPAPRRARGQRQARGLSVDSGTDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAVGVPSGLPVGVPTDIPTGVPNGAVTEPPQESRLRERSVDRSALPRVGEEHSSAHCGGGGGPLEKKEEILERGKPRDRPPKPGKSDVRSQDRPSALPSQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEDSVGAVHVFIGEHGEIRSCYLKAGTQKEGPPRPQGPSSDRVCSVQETLFSSPSSTPSASLEPPSGDPAASALQQQLLLLVARRTQSDRPRPCQDPEDYSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSLLGFVTLSRGFCKDLWALQFCLVMASCQYSLLKSVQPDPASPVHGYNQIITYSRPAYFCVLCALILLLDAGSTSRPPPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDMLVFGGSAVTGGLAAVYGVARSLLTAVGLNAFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLLCPAWAESPSDPLPEKMRESVKEILKSDLIMCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKLVLYPAVALHGLTVDAFAMSVRRVPATRCEVFLLTVAGMKLLRTAFCNPVHQFLALGFTVLFFRFDCRGASESFLLNFLVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGADQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVETGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADQGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARTQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLKPLQPYAKWHHIERDPALFSLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQERLDSDEDSPLVTLCFALCIMGRRTLGVAAHNMAVSLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAVLFEAMGAFESTVVVCHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRRAYLTFKVIKVNRECVRGLWAGQQQELIFLRNRNPERGSIQNHRQVLRNLINSSCDQPLGYPVYVSPLITSFLGSHDQLGRVWGGPAGLSRLGAWLRVRWRRMQKDCHAGHRGSGHIEEGDGSRGGGARGTSGSSEYSSGSTSRHGSAEQPRKASSPWQAAARDGPRHAGRKKGRSRPVQAGPGQRPAPPGLSGPAPGGQQSVLQTSTSAQEMARRPSGSRQSWCSSAASLQSQPAAPGAPLPPAAPGPARGRAGGPPASSLGSSSTSSTLSLLFGKRSLSSVLVISGLSAADGGNTSDTLSSSSVNIAAGPSARA…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(871527..871694,871967..872415,873102..873304,873822..874096,875067..875297,876033..876177,876289..876392,876821..877054,877460..877713,879366..879584,880485..880543,881454..881583,881697..881805,881943..882120,882342..882483,883000..883150,883490..883582,883783..883879,884561..884670,885942..886033,886954..887064,888005..888176,888894..888926,889436..889589,890699..890841,891278..891413,891925..892018,892332..892477,892968..893091,893629..894766,896828..896951,897589..897794,901449..901601))
location: region:871527-901601:-1
so has part: feature:901449-901601:-1:exon
so has part: feature:897589-897794:-1:exon
so has part: feature:896828-896951:-1:exon
so has part: feature:893629-894766:-1:exon
so has part: feature:892968-893091:-1:exon
so has part: feature:892332-892477:-1:exon
so has part: feature:891925-892018:-1:exon
so has part: feature:891278-891413:-1:exon
so has part: feature:890699-890841:-1:exon
so has part: feature:889436-889589:-1:exon
so has part: feature:888894-888926:-1:exon
so has part: feature:888005-888176:-1:exon
so has part: feature:886954-887064:-1:exon
so has part: feature:885942-886033:-1:exon
so has part: feature:884561-884670:-1:exon
so has part: feature:883783-883879:-1:exon
so has part: feature:883490-883582:-1:exon
so has part: feature:883000-883150:-1:exon
so has part: feature:882342-882483:-1:exon
so has part: feature:881943-882120:-1:exon
so has part: feature:881697-881805:-1:exon
so has part: feature:881454-881583:-1:exon
so has part: feature:880485-880543:-1:exon
so has part: feature:879366-879584:-1:exon
so has part: feature:877460-877713:-1:exon
so has part: feature:876821-877054:-1:exon
so has part: feature:876289-876392:-1:exon
so has part: feature:876033-876177:-1:exon
so has part: feature:875067-875297:-1:exon
so has part: feature:873822-874096:-1:exon
so has part: feature:873102-873304:-1:exon
so has part: feature:871967-872415:-1:exon
so has part: feature:871527-871694:-1:exon

XP_028903425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901449-901601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897589-897794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896828-896951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893629-894766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892968-893091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892332-892477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891925-892018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891278-891413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890699-890841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889436-889589:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888894-888926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888005-888176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886954-887064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885942-886033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884561-884670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:883783-883879:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:883490-883582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883000-883150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:882342-882483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:881943-882120:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881697-881805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881454-881583:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:880485-880543:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879366-879584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:877460-877713:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:876821-877054:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876289-876392:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876033-876177:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875067-875297:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:873822-874096:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:873102-873304:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:871967-872415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:871527-871694:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X1
translation: MVSQGLQLLRQGVWAALTGGWYHDPDHSKFTNSCHLYLWLFLLLLPLALHLAFPPNAATALVYCSSVTVVFATMKLVSYRLHLMFDEGEAEQRGGPSQDRAQKDSRKPRSGATLPAESPSNKRLARRQREGARWDSCTPPLRCSSRGHSLNSHSWSGSGPSERQEPEAAEDPLGARSVPSSACSAGPVGGREPGPRATPPGPPPGITGCAERPATATPPATAEPRSPAHGGSDPVVPAPGEKGPGAEGDDPQSLLADGGERREPRGDCGHEGSRSPSPLAGASGDLDDSEGEVAVTLVDNSVPGDPLCPHEPVRIVVTMSGGPSSGAGTAGGHEPGRDDSQSDLEPTGATPSAGRPLRIPLIKFQLPDRGDVPQRSGPGDEAPDSAPEGGGGGADHAPFLDPDDEAGPDTPAPRRARGQRQARGLSVDSGTDLASSHESAEVTSDTERALPTSKSDLEAKEGQPPSESNFLEFVSLLESISSSKGAVGVPSGLPVGVPTDIPTGVPNGAVTEPPQESRLRERSVDRSALPRVGEEHSSAHCGGGGGPLEKKEEILERGKPRDRPPKPGKSDVRSQDRPSALPSQGSRQRQIVYRVKSQPDGSLLQVISGPDASVQDEDSVGAVHVFIGEHGEIRSCYLKAGTQKEGPPRPQGPSSDRVCSVQETLFSSPSSTPSASLEPPSGDPAASALQQQLLLLVARRTQSDRPRPCQDPEDYSCSSSQRKFSREQFYKLIIFPGKWIKVWHDRLTLLALLDRTEDVKENVLATVLVLLVSLLGFVTLSRGFCKDLWALQFCLVMASCQYSLLKSVQPDPASPVHGYNQIITYSRPAYFCVLCALILLLDAGSTSRPPPSVVVFGVRLFSPGGLRLARDALIVFLYCFPAISLLGLFPQIDTFCTYLLEQVDMLVFGGSAVTGGLAAVYGVARSLLTAVGLNAFCFSAVKEPWNPQHVPALFSTFCGLLVALSYHLSRHSSDPTVLLSLFQGKSCPRLLCPAWAESPSDPLPEKMRESVKEILKSDLIMCAAMMVLAFAVSASTVFLALRPFLSTALFALAGAVGFTTHYLLPELRKHHPWMWLAHPLLRSHEHRQRHVSEPARLMWFERLYVWLQYLEKLVLYPAVALHGLTVDAFAMSVRRVPATRCEVFLLTVAGMKLLRTAFCNPVHQFLALGFTVLFFRFDCRGASESFLLNFLVVSILFGKLDDLLHKLRFVLAYVAPWQIAWGSSFHVFAQLFAIPHSAVLFLQTLGTAALSAPLSPFLGSVIFLASYVRPVRFWEKDYRTRHLDNSTTRLATQIEKDPGADQDNNRNSVFYEHLTRSLQESLCGDLALGRWGSFSAGDCFILASDYLNAFVHLVETGNGLVTFQLRGLEFRGTYCQQREVEAITEGDEADQGCCCCRPGHLPHLLSCNAAFSLRWLSWEVARTQYVLRGYSVSDSSAATMLQVFDLRRILVRFYVQSMIYFVVSSPKLALWIHDESLLKPLQPYAKWHHIERDPALFSLHVDDDFVPCLQGITRASFCTAYLQWIQFCAQKRQEQRLDSDEDSPLVTLCFALCIMGRRTLGVAAHNMAVSLDSFLFGLHTLFKGDFRVAVRDEWVFADMDLLHRVVAPAVRMSLKLHQDQFACPDEYEDPAVLFEAMGAFESTVVVCHEGDPGWRRAVLAGREELLTLRRVVDEGADDYKVIRLRRAYLTFKVIKVNRECVRGLWAGQQQELIFLRNRNPERGSIQNHRQVLRNLINSSCDQPLGYPVYVSPLITSFLGSHDQLGRVWGGPAGLSRLGAWLRVRWRRMQKDCHAGHRGSGHIEEGDGSRGGGARGTSGSSEYSSGSTSRHGSAEQPRKASSPWQAAARDGPRHAGRKKGRSRPVQAGPGQRPAPPGLSGPAPGGQQSVLQTSTSAQEMARRPSGSRQSWCSSAASLQSQPAAPGAPLPPAAPGPARGRAGGPPASSLGSSSTSSTLSLLFGKRSLSSVLVISGLSAADGGNTSDTLSSSSVNIAAGPSAR…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(871527..871694,871967..872415,873102..873304,873822..874096,875067..875297,876033..876177,876289..876395,876821..877054,877460..877713,879366..879584,880485..880543,881454..881583,881697..881805,881943..882120,882342..882483,883000..883150,883490..883582,883783..883879,884561..884670,885942..886033,886954..887064,888005..888176,888894..888926,889436..889589,890699..890841,891278..891413,891925..892018,892332..892477,892968..893091,893629..894766,896828..896951,897589..897794,901449..901601))
location: region:871527-901601:-1
so has part: feature:901449-901601:-1:exon
so has part: feature:897589-897794:-1:exon
so has part: feature:896828-896951:-1:exon
so has part: feature:893629-894766:-1:exon
so has part: feature:892968-893091:-1:exon
so has part: feature:892332-892477:-1:exon
so has part: feature:891925-892018:-1:exon
so has part: feature:891278-891413:-1:exon
so has part: feature:890699-890841:-1:exon
so has part: feature:889436-889589:-1:exon
so has part: feature:888894-888926:-1:exon
so has part: feature:888005-888176:-1:exon
so has part: feature:886954-887064:-1:exon
so has part: feature:885942-886033:-1:exon
so has part: feature:884561-884670:-1:exon
so has part: feature:883783-883879:-1:exon
so has part: feature:883490-883582:-1:exon
so has part: feature:883000-883150:-1:exon
so has part: feature:882342-882483:-1:exon
so has part: feature:881943-882120:-1:exon
so has part: feature:881697-881805:-1:exon
so has part: feature:881454-881583:-1:exon
so has part: feature:880485-880543:-1:exon
so has part: feature:879366-879584:-1:exon
so has part: feature:877460-877713:-1:exon
so has part: feature:876821-877054:-1:exon
so has part: feature:876289-876395:-1:exon
so has part: feature:876033-876177:-1:exon
so has part: feature:875067-875297:-1:exon
so has part: feature:873822-874096:-1:exon
so has part: feature:873102-873304:-1:exon
so has part: feature:871967-872415:-1:exon
so has part: feature:871527-871694:-1:exon

XP_028903424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901449-901601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897589-897794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896828-896951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893629-894766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892968-893091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892332-892477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891925-892018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891278-891413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890699-890841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889436-889589:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888894-888926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888005-888176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886954-887064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885942-886033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884561-884670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:883783-883879:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:883490-883582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883000-883150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:882342-882483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:881943-882120:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881697-881805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881454-881583:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:880485-880543:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879366-879584:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:877460-877713:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:876821-877054:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876289-876395:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876033-876177:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875067-875297:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:873822-874096:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:873102-873304:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:871967-872415:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:871527-871694:-1:exon

LOC114805622
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 904976..909308
location: region:904976-909308:1
so has part: feature:904976-909308:1:exon
subclass of: SO_0000011

114805622
type: Gene
SIO_000068: ncbigene

position:904976:1
position: 904976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909308:1
position: 909308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904976-909308:1:exon

LOC114805622
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805622
product: uncharacterized LOC114805622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005661136.1
SIO_010081: LOC114805622
subclass of: SO_0000673
so part of: LOC114805622
location: join(904976..905032,906753..906820,909126..909308)
location: region:904976-909308:1
so has part: feature:904976-905032:1:exon
so has part: feature:906753-906820:1:exon
so has part: feature:909126-909308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904976-905032:1:exon

position:905032:1
position: 905032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906753-906820:1:exon

position:906753:1
position: 906753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906820:1
position: 906820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:909126-909308:1:exon

position:909126:1
position: 909126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926445..938991
location: region:926445-938991:1
so has part: feature:926445-938991:1:exon
subclass of: SO_0000010

100081927
type: Gene
SIO_000068: ncbigene

position:926445:1
position: 926445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938991:1
position: 938991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926445-938991:1:exon

KCNK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: KCNK1
product: potassium two pore domain channel subfamily K member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_029047616.2
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(926445..926987,936590..936985,938285..938991)
location: region:926445-938991:1
so has part: feature:926445-926987:1:exon
so has part: feature:936590-936985:1:exon
so has part: feature:938285-938991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926445-926987:1:exon

position:926987:1
position: 926987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936590-936985:1:exon

position:936590:1
position: 936590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936985:1
position: 936985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938285-938991:1:exon

position:938285:1
position: 938285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium channel subfamily K member 1
translation: MLQWLAGSSCGRLVERHRSAWCFGLLALGYSVYLAFGAVVFSSVELPHEDLLRQELRALKRRFLADHRCLAEPQLERFLARVLEASGYGVSVLRNASGHWNWDFASALFFASTVLSTTGYGHTVPLSDGGKAFCIVYSVIGIPFTLLFLTAVVQRLIVHVTRRPVLYLHLRWGLSKQLVAGAHAVLLGFVTVSCFFFIPAAIFSALEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKEEEDQMHILDHDQLSFSSVAGRVADAKGEQKPEQADVTARSAPPPDGSPDP
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(926633..926987,936590..936985,938285..938547)
location: region:926633-938547:1
so has part: feature:926633-926987:1:exon
so has part: feature:936590-936985:1:exon
so has part: feature:938285-938547:1:exon

XP_028903449.1
type: Protein
SIO_000068: ncbiprotein

position:926633:1
position: 926633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938547:1
position: 938547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926633-926987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936590-936985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938285-938547:1:exon

LOC114805623
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 977435..999674
location: region:977435-999674:1
so has part: feature:977435-999674:1:exon
subclass of: SO_0000010

114805623
type: Gene
SIO_000068: ncbigene

position:977435:1
position: 977435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999674:1
position: 999674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977435-999674:1:exon

LOC114805623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC114805623
product: putative thiamine transporter SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029046878.2
SIO_010081: LOC114805623
subclass of: SO_0000673
so part of: LOC114805623
location: join(977435..977641,983381..983438,983515..983754,990813..991032,994149..994274,995449..995641,996711..996800,998881..999674)
location: region:977435-999674:1
so has part: feature:977435-977641:1:exon
so has part: feature:983381-983438:1:exon
so has part: feature:983515-983754:1:exon
so has part: feature:990813-991032:1:exon
so has part: feature:994149-994274:1:exon
so has part: feature:995449-995641:1:exon
so has part: feature:996711-996800:1:exon
so has part: feature:998881-999674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:977435-977641:1:exon

position:977641:1
position: 977641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983381-983438:1:exon

position:983381:1
position: 983381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983438:1
position: 983438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983515-983754:1:exon

position:983515:1
position: 983515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983754:1
position: 983754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:990813-991032:1:exon

position:990813:1
position: 990813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991032:1
position: 991032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994149-994274:1:exon

position:994149:1
position: 994149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994274:1
position: 994274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995449-995641:1:exon

position:995449:1
position: 995449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995641:1
position: 995641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:996711-996800:1:exon

position:996711:1
position: 996711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996800:1
position: 996800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:998881-999674:1:exon

position:998881:1
position: 998881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114805623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC114805623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3
translation: MKKHSARVAPLSACNSPVLTLTKVEGDERPPAPPAPPAEAQSGAACGGGGGAGPRAALWGLAVVLGVCATWAGSTQLAKLTFRTFDAPFTLTWFATAWNLLFFPVYYAGHVCTSAEKQAPRQRYRECCRFFGESGLTLKVFFIKIAPFGVLCTLTNYLYLYAIKKINTTDVSALFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASMAALYKVLFKLLLGSANFGEAALFLSALGVFNLLLVSCVPVVLYFTRVEHWDSLGDVPWRNLCGFSFLLLTFNIVLNFGIAVTYPTLISLGIVLSVPVNAVVDGYTSEISFNGVRVIAIIIIGLGFLLLLLPEDWDSWLLRLLARLKARSKEEAPEANGDVGSGLPVRARRGRPSFGR
SIO_010081: LOC114805623
subclass of: SO_0000673
so part of: LOC114805623
location: join(977566..977641,983381..983438,983515..983754,990813..991032,994149..994274,995449..995641,996711..996800,998881..999116)
location: region:977566-999116:1
so has part: feature:977566-977641:1:exon
so has part: feature:983381-983438:1:exon
so has part: feature:983515-983754:1:exon
so has part: feature:990813-991032:1:exon
so has part: feature:994149-994274:1:exon
so has part: feature:995449-995641:1:exon
so has part: feature:996711-996800:1:exon
so has part: feature:998881-999116:1:exon

XP_028902711.1
type: Protein
SIO_000068: ncbiprotein

position:977566:1
position: 977566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999116:1
position: 999116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977566-977641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983381-983438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983515-983754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990813-991032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994149-994274:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995449-995641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:996711-996800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998881-999116:1:exon

MIR1375
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
alternative label: oan-mir-1375
gene: MIR1375
gene synonym: oan-mir-1375
note: microRNA mir-1375; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 989538..989653
location: region:989538-989653:1
so has part: feature:989538-989653:1:exon
subclass of: SO_0000571

100314525
type: Gene
SIO_000068: ncbigene

MI0006826
type: miRBase
SIO_000068: mirbase

position:989538:1
position: 989538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989653:1
position: 989653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989538-989653:1:exon

MIR1375
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9258
alternative label: oan-mir-1375
gene: MIR1375
gene synonym: oan-mir-1375
product: microRNA mir-1375
inference: similar to RNA sequence (same species):RefSeq:NR_034784.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_034784.1
SIO_010081: MIR1375
subclass of: SO_0000673
so part of: MIR1375
location: 989538..989653
location: region:989538-989653:1
so has part: feature:989538-989653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989538-989653:1:exon

MIR1375
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
alternative label: oan-mir-1375
nc RNA class: miRNA
gene: MIR1375
gene synonym: oan-mir-1375
product: oan-miR-1375-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1375
subclass of: SO_0000673
so part of: MIR1375
location: 989567..989588
location: region:989567-989588:1
so has part: feature:989567-989588:1:exon

MIMAT0007064
type: miRBase
SIO_000068: mirbase

position:989567:1
position: 989567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989588:1
position: 989588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989567-989588:1:exon

MIR1375
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
alternative label: oan-mir-1375
nc RNA class: miRNA
gene: MIR1375
gene synonym: oan-mir-1375
product: oan-miR-1375-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1375
subclass of: SO_0000673
so part of: MIR1375
location: 989601..989621
location: region:989601-989621:1
so has part: feature:989601-989621:1:exon

MIMAT0007065
type: miRBase
SIO_000068: mirbase

position:989601:1
position: 989601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989621:1
position: 989621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989601-989621:1:exon

LOC100089230
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC100089230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1004347..1010092
location: region:1004347-1010092:1
so has part: feature:1004347-1010092:1:exon
subclass of: SO_0000010

100089230
type: Gene
SIO_000068: ncbigene

position:1004347:1
position: 1004347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010092:1
position: 1010092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004347-1010092:1:exon

LOC100089230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC100089230
product: cytochrome c oxidase assembly factor 6 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_029047714.2
SIO_010081: LOC100089230
subclass of: SO_0000673
so part of: LOC100089230
location: join(1004347..1004527,1007827..1007965,1009830..1010092)
location: region:1004347-1010092:1
so has part: feature:1004347-1004527:1:exon
so has part: feature:1007827-1007965:1:exon
so has part: feature:1009830-1010092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004347-1004527:1:exon

position:1004527:1
position: 1004527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007827-1007965:1:exon

position:1007827:1
position: 1007827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007965:1
position: 1007965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009830-1010092:1:exon

position:1009830:1
position: 1009830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100089230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC100089230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog
translation: MAAPSRQERAACWDARDRYWRCLDDNGDDASRCRHARGPFEATCPQQWIKYFDKRRDYLKFKEKFEAGQFQPSETKAGSS
SIO_010081: LOC100089230
subclass of: SO_0000673
so part of: LOC100089230
location: join(1004384..1004527,1007827..1007925)
location: region:1004384-1007925:1
so has part: feature:1004384-1004527:1:exon
so has part: feature:1007827-1007925:1:exon

XP_028903547.1
type: Protein
SIO_000068: ncbiprotein

position:1004384:1
position: 1004384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007925:1
position: 1007925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004384-1004527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007827-1007925:1:exon

TARBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1008503..1028183)
location: region:1008503-1028183:-1
so has part: feature:1008503-1028183:-1:exon
subclass of: SO_0000010

100090995
type: Gene
SIO_000068: ncbigene

position:1008503:-1
position: 1008503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028183:-1
position: 1028183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008503-1028183:-1:exon

TARBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_029047633.2
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(1008503..1008745,1008947..1009083,1009300..1009424,1009527..1009727,1009904..1010078,1010927..1011008,1011839..1012035,1012492..1012578,1013441..1013590,1013810..1013920,1014263..1014386,1015023..1015094,1015203..1015402,1015705..1015893,1015995..1016259,1016671..1016864,1017493..1017657,1018929..1019026,1019802..1019977,1021427..1021523,1021979..1022120,1022567..1022656,1023651..1023747,1023861..1023996,1024399..1024499,1025550..1025602,1025906..1026054,1026587..1026656,1028032..1028183))
location: region:1008503-1028183:-1
so has part: feature:1028032-1028183:-1:exon
so has part: feature:1026587-1026656:-1:exon
so has part: feature:1025906-1026054:-1:exon
so has part: feature:1025550-1025602:-1:exon
so has part: feature:1024399-1024499:-1:exon
so has part: feature:1023861-1023996:-1:exon
so has part: feature:1023651-1023747:-1:exon
so has part: feature:1022567-1022656:-1:exon
so has part: feature:1021979-1022120:-1:exon
so has part: feature:1021427-1021523:-1:exon
so has part: feature:1019802-1019977:-1:exon
so has part: feature:1018929-1019026:-1:exon
so has part: feature:1017493-1017657:-1:exon
so has part: feature:1016671-1016864:-1:exon
so has part: feature:1015995-1016259:-1:exon
so has part: feature:1015705-1015893:-1:exon
so has part: feature:1015203-1015402:-1:exon
so has part: feature:1015023-1015094:-1:exon
so has part: feature:1014263-1014386:-1:exon
so has part: feature:1013810-1013920:-1:exon
so has part: feature:1013441-1013590:-1:exon
so has part: feature:1012492-1012578:-1:exon
so has part: feature:1011839-1012035:-1:exon
so has part: feature:1010927-1011008:-1:exon
so has part: feature:1009904-1010078:-1:exon
so has part: feature:1009527-1009727:-1:exon
so has part: feature:1009300-1009424:-1:exon
so has part: feature:1008947-1009083:-1:exon
so has part: feature:1008503-1008745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028032-1028183:-1:exon

position:1028032:-1
position: 1028032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026587-1026656:-1:exon

position:1026587:-1
position: 1026587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026656:-1
position: 1026656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025906-1026054:-1:exon

position:1025906:-1
position: 1025906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026054:-1
position: 1026054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1025550-1025602:-1:exon

position:1025550:-1
position: 1025550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025602:-1
position: 1025602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1024399-1024499:-1:exon

position:1024399:-1
position: 1024399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024499:-1
position: 1024499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023861-1023996:-1:exon

position:1023861:-1
position: 1023861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023996:-1
position: 1023996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023651-1023747:-1:exon

position:1023651:-1
position: 1023651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023747:-1
position: 1023747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022567-1022656:-1:exon

position:1022567:-1
position: 1022567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022656:-1
position: 1022656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1021979-1022120:-1:exon

position:1021979:-1
position: 1021979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022120:-1
position: 1022120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1021427-1021523:-1:exon

position:1021427:-1
position: 1021427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021523:-1
position: 1021523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1019802-1019977:-1:exon

position:1019802:-1
position: 1019802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019977:-1
position: 1019977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1018929-1019026:-1:exon

position:1018929:-1
position: 1018929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019026:-1
position: 1019026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1017493-1017657:-1:exon

position:1017493:-1
position: 1017493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017657:-1
position: 1017657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1016671-1016864:-1:exon

position:1016671:-1
position: 1016671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016864:-1
position: 1016864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1015995-1016259:-1:exon

position:1015995:-1
position: 1015995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016259:-1
position: 1016259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1015705-1015893:-1:exon

position:1015705:-1
position: 1015705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015893:-1
position: 1015893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1015203-1015402:-1:exon

position:1015203:-1
position: 1015203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015402:-1
position: 1015402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1015023-1015094:-1:exon

position:1015023:-1
position: 1015023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015094:-1
position: 1015094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1014263-1014386:-1:exon

position:1014263:-1
position: 1014263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014386:-1
position: 1014386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1013810-1013920:-1:exon

position:1013810:-1
position: 1013810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013920:-1
position: 1013920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1013441-1013590:-1:exon

position:1013441:-1
position: 1013441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013590:-1
position: 1013590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1012492-1012578:-1:exon

position:1012492:-1
position: 1012492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012578:-1
position: 1012578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1011839-1012035:-1:exon

position:1011839:-1
position: 1011839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012035:-1
position: 1012035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1010927-1011008:-1:exon

position:1010927:-1
position: 1010927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011008:-1
position: 1011008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1009904-1010078:-1:exon

position:1009904:-1
position: 1009904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010078:-1
position: 1010078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1009527-1009727:-1:exon

position:1009527:-1
position: 1009527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009727:-1
position: 1009727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1009300-1009424:-1:exon

position:1009300:-1
position: 1009300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009424:-1
position: 1009424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1008947-1009083:-1:exon

position:1008947:-1
position: 1008947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009083:-1
position: 1009083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1008503-1008745:-1:exon

position:1008745:-1
position: 1008745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable methyltransferase TARBP1
translation: MFFSPRVEPSLFWWSDEKKELLLRFWENYILILETLEGNQIHVIKPVLPKLNSLFEDAVAEGKTRWLIHPSWHLCIYKRMFESENKTLVGEGVMHFLELWATEGLPSAPDFSEFIIGPLMDALSESSLYSRSPGQPSGSCSPVGMKLQGFLATYVAGLPEEKAKRSFLLRFIEKMSTRHWCAVPILFFSMALARIPRSCILGAEGLLALREVLQCTMMTHQVLLRGAAQGYLLQAALRLVDVETVSLSEMASFLACLRPEESLGRGTALWTEVCDWLRVNEASFGKSLNRAAAGEQEESSLNAYVRSLVRDYVKSPSDEGGRCFVPDCSEAKLVATMVLLATDAEGRQSEGSEKEDRGPDGLRTVLRPLVDVLSKLGTNPYIPALRADRCLQLILQLLRTAPSRGSGSRDDEALTVLQNCLVAASESISDFLLRRLTVGELSTVADLDRCHLYLGVLAELVSLHPSGAVWSPAAPPCSWLALLKSASILHLQGKPDGGDRGLGEQIQKVVSMACLARTCEMADRQPGRSLDSLDADGTFRRFVSSAQFDRRPEKPRCPGEQGSFLGESSTSRGWGKSVARYVHDQWVCRRFALNRSSRGQAPDPGDGTPPAAAREPGRPETLLRAALEALAVLPPDHVLPVFGSMKILIPELLNSHESLCVRSFDAAWKIVATLSNTQLVFWPNLKAFVQFAFDGRVLAVASRRKGRAHARLKEIASEMTEMSSTRTGVFNVLIGHCCRTWLASPWGEPGLPEDPPSSARDYVGLVAEACVFGPVFRRDQRLVQDVRAFVGSLGSECAANVVTESTNRDDHHVRVCAVKFLCLLDGARRPAHKSYVGELAAGLLEKEALVASSRSHYYANSLQHRVQNRVWQTLLVLFPKLDQDFLGGVVDKVFQAGSVSNQASVKYAIQWMIILILHRYPQFFPKFWDRFRPGEENFKTSMCTYLSVLFHLDVIVQNEAEMRAQLKKGLVVALQWCFSHNFRVRLYALVTLKKIWGLCKTWRLEECEALSPAIESSLEQVENTHGAGNAKRNWQRIQEHFFFAVFHPLRDYNLETIFYILPRLAELAEDEWIPLSKFTGFTDIPTESGRPSWGRARGELRDLRPDPWTQPDTGLNPAELALHLEGTDVQKKIIPWKNNSPAPPDLDLDLLFQDRAARLGKSLSGLIVVASLVAKPTNLGGLCRTCEIFGVSTLVLGSLQCASDKQFQHLSVSAEQWLPLLEVKPAQLVDYLRQRKADGYTIIGVEQTARSVDLTEYRFPEKSLLLLGNEREGIPAHLLGQLDVCVEIPQQGIVRSLNVHVSGALLIWEYTRQRLARRPRDGGRTAGRAREGQGS
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(1008541..1008745,1008947..1009083,1009300..1009424,1009527..1009727,1009904..1010078,1010927..1011008,1011839..1012035,1012492..1012578,1013441..1013590,1013810..1013920,1014263..1014386,1015023..1015094,1015203..1015402,1015705..1015893,1015995..1016259,1016671..1016864,1017493..1017657,1018929..1019026,1019802..1019977,1021427..1021523,1021979..1022120,1022567..1022656,1023651..1023747,1023861..1023996,1024399..1024499,1025550..1025602,1025906..1026054,1026587..1026656,1028032..1028151))
location: region:1008541-1028151:-1
so has part: feature:1028032-1028151:-1:exon
so has part: feature:1026587-1026656:-1:exon
so has part: feature:1025906-1026054:-1:exon
so has part: feature:1025550-1025602:-1:exon
so has part: feature:1024399-1024499:-1:exon
so has part: feature:1023861-1023996:-1:exon
so has part: feature:1023651-1023747:-1:exon
so has part: feature:1022567-1022656:-1:exon
so has part: feature:1021979-1022120:-1:exon
so has part: feature:1021427-1021523:-1:exon
so has part: feature:1019802-1019977:-1:exon
so has part: feature:1018929-1019026:-1:exon
so has part: feature:1017493-1017657:-1:exon
so has part: feature:1016671-1016864:-1:exon
so has part: feature:1015995-1016259:-1:exon
so has part: feature:1015705-1015893:-1:exon
so has part: feature:1015203-1015402:-1:exon
so has part: feature:1015023-1015094:-1:exon
so has part: feature:1014263-1014386:-1:exon
so has part: feature:1013810-1013920:-1:exon
so has part: feature:1013441-1013590:-1:exon
so has part: feature:1012492-1012578:-1:exon
so has part: feature:1011839-1012035:-1:exon
so has part: feature:1010927-1011008:-1:exon
so has part: feature:1009904-1010078:-1:exon
so has part: feature:1009527-1009727:-1:exon
so has part: feature:1009300-1009424:-1:exon
so has part: feature:1008947-1009083:-1:exon
so has part: feature:1008541-1008745:-1:exon

XP_028903466.2
type: Protein
SIO_000068: ncbiprotein

position:1008541:-1
position: 1008541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028151:-1
position: 1028151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028032-1028151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026587-1026656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025906-1026054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025550-1025602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024399-1024499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023861-1023996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023651-1023747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022567-1022656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021979-1022120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021427-1021523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1019802-1019977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1018929-1019026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1017493-1017657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1016671-1016864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1015995-1016259:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1015705-1015893:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1015203-1015402:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1015023-1015094:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1014263-1014386:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1013810-1013920:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1013441-1013590:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1012492-1012578:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1011839-1012035:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1010927-1011008:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1009904-1010078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1009527-1009727:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1009300-1009424:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1008947-1009083:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1008541-1008745:-1:exon

LOC114805756
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1035478..1037230
location: region:1035478-1037230:1
so has part: feature:1035478-1037230:1:exon
subclass of: SO_0000011

114805756
type: Gene
SIO_000068: ncbigene

position:1035478:1
position: 1035478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037230:1
position: 1037230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035478-1037230:1:exon

LOC114805756
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805756
product: uncharacterized LOC114805756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_003753779.2
SIO_010081: LOC114805756
subclass of: SO_0000673
so part of: LOC114805756
location: join(1035478..1035741,1037068..1037230)
location: region:1035478-1037230:1
so has part: feature:1035478-1035741:1:exon
so has part: feature:1037068-1037230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1035478-1035741:1:exon

position:1035741:1
position: 1035741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1037068-1037230:1:exon

position:1037068:1
position: 1037068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRF2BP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: IRF2BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055754..1058976)
location: region:1055754-1058976:-1
so has part: feature:1055754-1058976:-1:exon
subclass of: SO_0000010

100090944
type: Gene
SIO_000068: ncbigene

position:1055754:-1
position: 1055754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058976:-1
position: 1058976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055754-1058976:-1:exon

IRF2BP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: IRF2BP2
product: interferon regulatory factor 2 binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029047634.2
SIO_010081: IRF2BP2
subclass of: SO_0000673
so part of: IRF2BP2
location: complement(join(1055754..1056531,1057267..1058300,1058936..1058976))
location: region:1055754-1058976:-1
so has part: feature:1058936-1058976:-1:exon
so has part: feature:1057267-1058300:-1:exon
so has part: feature:1055754-1056531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058936-1058976:-1:exon

position:1058936:-1
position: 1058936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057267-1058300:-1:exon

position:1057267:-1
position: 1057267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058300:-1
position: 1058300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055754-1056531:-1:exon

position:1056531:-1
position: 1056531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRF2BP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: IRF2BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 2-binding protein 2
translation: MANGAAGEPPPIDGPGGGGGGGGGGRAQCAGAVRRLSKKPEERRRRRRRRPGPRGRPRDSLGAGGRLPEPREGGLLSGRSPSPPPLLPSSLPPAMSSVSTSRRQSCYLCDLPRMPWAVVWDFTEPVCRGCVNYEGADRVELVIDAARQLKRGHPCFPAARSPPAAKPPGPAAKDLLLHPHLPPPPEPPPPQAQPRERYPARPLPNGFPAKPDEPPELNRQSPNPRRTLGPGPPTLLPLLNGSPAASAPPAGLGLAARAAAPAQRPDPGDKEKPPHRGPNEGPGLADPDAAGPGGGGGGGGGSKARAEQDWPGKPKTVRDTLLALHQHGPFEPKLKKEPGLGPPRGLAFELNGASGPKPVPRTARKRKPSPEPEGEAGPPKLNGEAQPWPAAPAEGPKVPVTPPSFASPPPPTASPHPHRTTPPEAAQNGQSPMAALILVADNAGGGHAPKDANPGHPAGRRNSGGPPSPSAGGQRRPGAGGPEPAGHPAGLPDSSLAAGVPLCCTLCRERLEDTHFVQCPSVPLHKFCFPCSRQSIKQQGASGEVYCPSGEKCPLVGSSVPWAFMQGEIATILAGDVKVKKERDS
SIO_010081: IRF2BP2
subclass of: SO_0000673
so part of: IRF2BP2
location: complement(join(1055849..1056531,1057267..1058300,1058936..1058976))
location: region:1055849-1058976:-1
so has part: feature:1058936-1058976:-1:exon
so has part: feature:1057267-1058300:-1:exon
so has part: feature:1055849-1056531:-1:exon

XP_028903467.1
type: Protein
SIO_000068: ncbiprotein

position:1055849:-1
position: 1055849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058936-1058976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057267-1058300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055849-1056531:-1:exon

LOC114805733
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1096575..1099711)
location: region:1096575-1099711:-1
so has part: feature:1096575-1099711:-1:exon
subclass of: SO_0000010

114805733
type: Gene
SIO_000068: ncbigene

position:1096575:-1
position: 1096575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099711:-1
position: 1099711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096575-1099711:-1:exon

LOC114805733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LOC114805733
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_029047635.1
SIO_010081: LOC114805733
subclass of: SO_0000673
so part of: LOC114805733
location: complement(join(1096575..1096925,1097210..1097345,1098329..1098524,1099258..1099711))
location: region:1096575-1099711:-1
so has part: feature:1099258-1099711:-1:exon
so has part: feature:1098329-1098524:-1:exon
so has part: feature:1097210-1097345:-1:exon
so has part: feature:1096575-1096925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099258-1099711:-1:exon

position:1099258:-1
position: 1099258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1098329-1098524:-1:exon

position:1098329:-1
position: 1098329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098524:-1
position: 1098524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1097210-1097345:-1:exon

position:1097210:-1
position: 1097210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097345:-1
position: 1097345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1096575-1096925:-1:exon

position:1096925:-1
position: 1096925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114805733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: LOC114805733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MNKRDFPSAPSDRGSRSAGAEEYSFSPRPPGAICPGGAGGWKPGLPRPGPPPPGPAASPDRTERRRIPAPLSGWAAGGDASPRWERGLPDGQRVGISGAAADVGCGVPSPPPPGPFPRPIGGTGPVPGVAEAQRPAGARGRKPTAPRAPGGTGRRRRDGEGKRKRAHFTGALRPARGSSVEEGARGSRGCCEHVPRESEAGAKMDTVPERERAVMHVAIRPGRDRLSRRRSRERQWVSAQARPRGSAPAGARARMSARLCTWPPERRPPPGVPGRRPPGGRLLSAEARRMPRAVPRGDASPPGPAEGAPGPRSPREAGAAGSPAGNGAGGSEPTVPRPGREAADDGGGVGGLGRFTERRPGRPSRAERRAELRTPPGA
SIO_010081: LOC114805733
subclass of: SO_0000673
so part of: LOC114805733
location: complement(join(1096575..1096925,1097210..1097345,1098329..1098524,1099258..1099711))
location: region:1096575-1099711:-1
so has part: feature:1099258-1099711:-1:exon
so has part: feature:1098329-1098524:-1:exon
so has part: feature:1097210-1097345:-1:exon
so has part: feature:1096575-1096925:-1:exon

XP_028903468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1099258-1099711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098329-1098524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1097210-1097345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096575-1096925:-1:exon

LOC114805757
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109034..1114783
location: region:1109034-1114783:1
so has part: feature:1109034-1114783:1:exon
subclass of: SO_0000011

114805757
type: Gene
SIO_000068: ncbigene

position:1109034:1
position: 1109034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114783:1
position: 1114783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109034-1114783:1:exon

LOC114805757
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805757
product: uncharacterized LOC114805757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005661141.1
SIO_010081: LOC114805757
subclass of: SO_0000673
so part of: LOC114805757
location: join(1109034..1109210,1114462..1114783)
location: region:1109034-1114783:1
so has part: feature:1109034-1109210:1:exon
so has part: feature:1114462-1114783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109034-1109210:1:exon

position:1109210:1
position: 1109210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114462-1114783:1:exon

position:1114462:1
position: 1114462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOMM20
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TOMM20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1154181..1162772)
location: region:1154181-1162772:-1
so has part: feature:1154181-1162772:-1:exon
subclass of: SO_0000010

100081302
type: Gene
SIO_000068: ncbigene

position:1154181:-1
position: 1154181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162772:-1
position: 1162772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154181-1162772:-1:exon

TOMM20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TOMM20
product: translocase of outer mitochondrial membrane 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_029047722.2
SIO_010081: TOMM20
subclass of: SO_0000673
so part of: TOMM20
location: complement(join(1154181..1154618,1155649..1155791,1156201..1156282,1156708..1156754,1162613..1162772))
location: region:1154181-1162772:-1
so has part: feature:1162613-1162772:-1:exon
so has part: feature:1156708-1156754:-1:exon
so has part: feature:1156201-1156282:-1:exon
so has part: feature:1155649-1155791:-1:exon
so has part: feature:1154181-1154618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1162613-1162772:-1:exon

position:1162613:-1
position: 1162613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1156708-1156754:-1:exon

position:1156708:-1
position: 1156708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156754:-1
position: 1156754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156201-1156282:-1:exon

position:1156201:-1
position: 1156201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156282:-1
position: 1156282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155649-1155791:-1:exon

position:1155649:-1
position: 1155649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155791:-1
position: 1155791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154181-1154618:-1:exon

position:1154618:-1
position: 1154618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TOMM20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM20 homolog
translation: MVGRSGALAAGLCGALFIGYCIYFDRKRRSHPDFKLRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQRIVSAQSLAEDDVE
SIO_010081: TOMM20
subclass of: SO_0000673
so part of: TOMM20
location: complement(join(1154574..1154618,1155649..1155791,1156201..1156282,1156708..1156754,1162613..1162733))
location: region:1154574-1162733:-1
so has part: feature:1162613-1162733:-1:exon
so has part: feature:1156708-1156754:-1:exon
so has part: feature:1156201-1156282:-1:exon
so has part: feature:1155649-1155791:-1:exon
so has part: feature:1154574-1154618:-1:exon

XP_028903555.1
type: Protein
SIO_000068: ncbiprotein

position:1154574:-1
position: 1154574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162733:-1
position: 1162733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162613-1162733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156708-1156754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156201-1156282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155649-1155791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154574-1154618:-1:exon

RBM34
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: RBM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164133..1173156)
location: region:1164133-1173156:-1
so has part: feature:1164133-1173156:-1:exon
subclass of: SO_0000010

100081332
type: Gene
SIO_000068: ncbigene

position:1164133:-1
position: 1164133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173156:-1
position: 1173156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164133-1173156:-1:exon

RBM34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: RBM34
product: RNA binding motif protein 34, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_007670315.2
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1164133..1164470,1164974..1165092,1165932..1165971,1166249..1166312,1166823..1166906,1167626..1167669,1169194..1169413,1170208..1170353,1172949..1173156))
location: region:1164133-1173156:-1
so has part: feature:1172949-1173156:-1:exon
so has part: feature:1170208-1170353:-1:exon
so has part: feature:1169194-1169413:-1:exon
so has part: feature:1167626-1167669:-1:exon
so has part: feature:1166823-1166906:-1:exon
so has part: feature:1166249-1166312:-1:exon
so has part: feature:1165932-1165971:-1:exon
so has part: feature:1164974-1165092:-1:exon
so has part: feature:1164133-1164470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172949-1173156:-1:exon

position:1172949:-1
position: 1172949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1170208-1170353:-1:exon

position:1170208:-1
position: 1170208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170353:-1
position: 1170353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169194-1169413:-1:exon

position:1169194:-1
position: 1169194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169413:-1
position: 1169413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1167626-1167669:-1:exon

position:1167626:-1
position: 1167626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167669:-1
position: 1167669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1166823-1166906:-1:exon

position:1166823:-1
position: 1166823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166906:-1
position: 1166906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1166249-1166312:-1:exon

position:1166249:-1
position: 1166249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166312:-1
position: 1166312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165932-1165971:-1:exon

position:1165932:-1
position: 1165932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165971:-1
position: 1165971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1164974-1165092:-1:exon

position:1164974:-1
position: 1164974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165092:-1
position: 1165092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1164133-1164470:-1:exon

position:1164470:-1
position: 1164470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: RBM34
product: RNA binding motif protein 34, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_001512094.4
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1164133..1164470,1164974..1165092,1165932..1165971,1166249..1166312,1166823..1166906,1167626..1167669,1168663..1168722,1169194..1169413,1170208..1170353,1172949..1173156))
location: region:1164133-1173156:-1
so has part: feature:1172949-1173156:-1:exon
so has part: feature:1170208-1170353:-1:exon
so has part: feature:1169194-1169413:-1:exon
so has part: feature:1168663-1168722:-1:exon
so has part: feature:1167626-1167669:-1:exon
so has part: feature:1166823-1166906:-1:exon
so has part: feature:1166249-1166312:-1:exon
so has part: feature:1165932-1165971:-1:exon
so has part: feature:1164974-1165092:-1:exon
so has part: feature:1164133-1164470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172949-1173156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170208-1170353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169194-1169413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168663-1168722:-1:exon

position:1168663:-1
position: 1168663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168722:-1
position: 1168722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1167626-1167669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166823-1166906:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166249-1166312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1165932-1165971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164974-1165092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164133-1164470:-1:exon

RBM34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: RBM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 34 isoform X2
translation: MADERTEEEQQERRPSATGEYRIGQVAGSLPGASGSRGSAGAFALASLFAPTLLQTQALYRPAPAEATRRRKRKEEEESETPTGSAGEPRPPGKRAKKKRRQQPSLADQKLADRESALTCADEEEEERETQATEKRKGEARGPGGKAPARSAGAKPRKPHEGSPEAERLKNERTVFVGNLPVTCNKKIPAEGISTKKLAAIKRKFHPEQKNINAYVVFKKESSAAKALKRNGTQISDGFRIRVDLASETSSRDKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLNNSELMGRKLRVMRSVSKEKTRASPNPNRKAFAASKQRFSSLKETGHSEHAFSGEKAIPGKKKKKKKGQKTANRKQAEKHK
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1164192..1164470,1164974..1165092,1165932..1165971,1166249..1166312,1166823..1166906,1167626..1167669,1169194..1169413,1170208..1170353,1172949..1173143))
location: region:1164192-1173143:-1
so has part: feature:1172949-1173143:-1:exon
so has part: feature:1170208-1170353:-1:exon
so has part: feature:1169194-1169413:-1:exon
so has part: feature:1167626-1167669:-1:exon
so has part: feature:1166823-1166906:-1:exon
so has part: feature:1166249-1166312:-1:exon
so has part: feature:1165932-1165971:-1:exon
so has part: feature:1164974-1165092:-1:exon
so has part: feature:1164192-1164470:-1:exon

XP_007668505.1
type: Protein
SIO_000068: ncbiprotein

position:1164192:-1
position: 1164192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173143:-1
position: 1173143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172949-1173143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170208-1170353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169194-1169413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1167626-1167669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166823-1166906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166249-1166312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165932-1165971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1164974-1165092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164192-1164470:-1:exon

RBM34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: RBM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 34 isoform X1
translation: MADERTEEEQQERRPSATGEYRIGQVAGSLPGASGSRGSAGAFALASLFAPTLLQTQALYRPAPAEATRRRKRKEEEESETPTGSAGEPRPPGKRAKKKRRQQPSLADQKLADRESALTCADEEEEERETQATEKRKGEARGPGGKAPARSAGAKPRKPHEGSPEAERLKNERTVFVGNLPVTCNKKKLKSIFKEYGPIESVRFRSVIPAEGISTKKLAAIKRKFHPEQKNINAYVVFKKESSAAKALKRNGTQISDGFRIRVDLASETSSRDKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLNNSELMGRKLRVMRSVSKEKTRASPNPNRKAFAASKQRFSSLKETGHSEHAFSGEKAIPGKKKKKKKGQKTANRKQAEKHK
SIO_010081: RBM34
subclass of: SO_0000673
so part of: RBM34
location: complement(join(1164192..1164470,1164974..1165092,1165932..1165971,1166249..1166312,1166823..1166906,1167626..1167669,1168663..1168722,1169194..1169413,1170208..1170353,1172949..1173143))
location: region:1164192-1173143:-1
so has part: feature:1172949-1173143:-1:exon
so has part: feature:1170208-1170353:-1:exon
so has part: feature:1169194-1169413:-1:exon
so has part: feature:1168663-1168722:-1:exon
so has part: feature:1167626-1167669:-1:exon
so has part: feature:1166823-1166906:-1:exon
so has part: feature:1166249-1166312:-1:exon
so has part: feature:1165932-1165971:-1:exon
so has part: feature:1164974-1165092:-1:exon
so has part: feature:1164192-1164470:-1:exon

XP_001512144.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1172949-1173143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170208-1170353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169194-1169413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168663-1168722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167626-1167669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166823-1166906:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166249-1166312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1165932-1165971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164974-1165092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164192-1164470:-1:exon

ARID4B
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1176944..1270113)
location: region:1176944-1270113:-1
so has part: feature:1176944-1270113:-1:exon
subclass of: SO_0000010

100081355
type: Gene
SIO_000068: ncbigene

position:1176944:-1
position: 1176944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270113:-1
position: 1270113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176944-1270113:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029047108.2
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1176944..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193584..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269692,1269932..1270113))
location: region:1176944-1270113:-1
so has part: feature:1269932-1270113:-1:exon
so has part: feature:1269638-1269692:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193584-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1176944-1177757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269932-1270113:-1:exon

position:1269932:-1
position: 1269932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1269638-1269692:-1:exon

position:1269638:-1
position: 1269638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269692:-1
position: 1269692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230276-1230386:-1:exon

position:1230276:-1
position: 1230276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230386:-1
position: 1230386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1227878-1227943:-1:exon

position:1227878:-1
position: 1227878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227943:-1
position: 1227943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1225317-1225407:-1:exon

position:1225317:-1
position: 1225317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225407:-1
position: 1225407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1221695-1221774:-1:exon

position:1221695:-1
position: 1221695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221774:-1
position: 1221774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1218908-1218999:-1:exon

position:1218908:-1
position: 1218908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218999:-1
position: 1218999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1215046-1215184:-1:exon

position:1215046:-1
position: 1215046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215184:-1
position: 1215184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1211014-1211093:-1:exon

position:1211014:-1
position: 1211014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211093:-1
position: 1211093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1208822-1208898:-1:exon

position:1208822:-1
position: 1208822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208898:-1
position: 1208898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1206189-1206343:-1:exon

position:1206189:-1
position: 1206189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206343:-1
position: 1206343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1203471-1203543:-1:exon

position:1203471:-1
position: 1203471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203543:-1
position: 1203543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1202589-1202683:-1:exon

position:1202589:-1
position: 1202589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202683:-1
position: 1202683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1200971-1201068:-1:exon

position:1200971:-1
position: 1200971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201068:-1
position: 1201068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1199583-1199826:-1:exon

position:1199583:-1
position: 1199583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199826:-1
position: 1199826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1197960-1198135:-1:exon

position:1197960:-1
position: 1197960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198135:-1
position: 1198135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1193584-1193754:-1:exon

position:1193584:-1
position: 1193584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193754:-1
position: 1193754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1187230-1187314:-1:exon

position:1187230:-1
position: 1187230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187314:-1
position: 1187314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1185632-1185830:-1:exon

position:1185632:-1
position: 1185632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185830:-1
position: 1185830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1183756-1184955:-1:exon

position:1183756:-1
position: 1183756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184955:-1
position: 1184955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1182727-1182840:-1:exon

position:1182727:-1
position: 1182727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182840:-1
position: 1182840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1180795-1181010:-1:exon

position:1180795:-1
position: 1180795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181010:-1
position: 1181010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1179875-1180021:-1:exon

position:1179875:-1
position: 1179875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180021:-1
position: 1180021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1176944-1177757:-1:exon

position:1177757:-1
position: 1177757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029047110.2
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1176944..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269692,1269932..1270112))
location: region:1176944-1270112:-1
so has part: feature:1269932-1270112:-1:exon
so has part: feature:1269638-1269692:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1176944-1177757:-1:exon

position:1270112:-1
position: 1270112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269932-1270112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269638-1269692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1176944-1177757:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029047107.2
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1176944..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193476..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269692,1269932..1270112))
location: region:1176944-1270112:-1
so has part: feature:1269932-1270112:-1:exon
so has part: feature:1269638-1269692:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193476-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1176944-1177757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269932-1270112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269638-1269692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1193476-1193754:-1:exon

position:1193476:-1
position: 1193476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1176944-1177757:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X4
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAVVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDERKQIDELLGKVVCVDYVSLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFASVPRKDVQEISSETAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSSKPCKECENAKEAKVHEEPAPEVKAVKAEEGATERKEEEKPTEEANERKENIKPPLGNRKNVPEPGVTQSDQEKESNREKNEEDERPEDKDDEISKVDEALGAKVEAEEEKGKAGYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFQTNTPPEMGSKVDSAEARNAEPAHVKSIEITSILNGLQASESSAEESERDAEPGPQRLESPGKKEPLGGPLGLDPSELRSKEEQGPSSAPEESQVLPEPGARKEPEEFSEASDSEEEDGATKKRKDAKKDPGDKAAKPQAKRGKRRFGGGGEDGAKTGSPSRKDDRTKGKEAPGLEPSSNSSSEDDEDEKSKGKGTPAKKYNGLEEKRKSLRTTVFYSGFSEVAEKRLKLLTNSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPRDGAAAGEEQPPAAEEERRPAGPRPGPDPDQPCPLGAEGKPVEEKAVEAGDKKADFPSSGSNSVLNTPPTTPESPASVTVTETGRQPSAVPAAEALAPNQEEVRSIKSETDSTIEVDSVAGELHDLRSEGNVSPTGFDASVSSGSSTQPEPEHPEKVCTGQKRVKEAQGGGSSAKKQKRNHKTSVVNNKKKVKASNSSDSEELSAGESAPKAQPAKAASAGMKAHHTRSPARIQSPGKCGKNGDKDSDLKEHGGRLPKIYKWSFQMSDLENMSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERERMSSSSSSSVLPGFVSGAPAEGAPGQGEPAGRGGWVGWAVPGRRPRPVDRLGTGTGRGRGSGRGGPGHGGASSGTRPSAKPGPRRATLRRAISRPVPSRRRCRARPPREAFVYRGRVHPSYLIPGTVNTPYFIVQTVLLLGV
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1177330..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269643))
location: region:1177330-1269643:-1
so has part: feature:1269638-1269643:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1177330-1177757:-1:exon

XP_028902943.1
type: Protein
SIO_000068: ncbiprotein

position:1177330:-1
position: 1177330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269643:-1
position: 1269643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269638-1269643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1177330-1177757:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X2
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAVVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDERKQIDELLGKVVCVDYVSLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFASVPRKDVQEISSETAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSSKPCKECENAKEAKVHEEPAPEVKAVKAEEGATERKEEEKPTEEANERKENIKPPLGNRKNVPEPGVTQSDQEKESNREKNEEDERPEDKDDEISKVDEALGAKVEAEEEKGKAGDETNKEEEEDEEEAEEEEEEEVEEEEEEEEEEEEDVDDHNEEEEFECYPPGMKVQVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFQTNTPPEMGSKVDSAEARNAEPAHVKSIEITSILNGLQASESSAEESERDAEPGPQRLESPGKKEPLGGPLGLDPSELRSKEEQGPSSAPEESQVLPEPGARKEPEEFSEASDSEEEDGATKKRKDAKKDPGDKAAKPQAKRGKRRFGGGGEDGAKTGSPSRKDDRTKGKEAPGLEPSSNSSSEDDEDEKSKGKGTPAKKYNGLEEKRKSLRTTVFYSGFSEVAEKRLKLLTNSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPRDGAAAGEEQPPAAEEERRPAGPRPGPDPDQPCPLGAEGKPVEEKAVEAGDKKADFPSSGSNSVLNTPPTTPESPASVTVTETGRQPSAVPAAEALAPNQEEVRSIKSETDSTIEVDSVAGELHDLRSEGNVSPTGFDASVSSGSSTQPEPEHPEKVCTGQKRVKEAQGGGSSAKKQKRNHKTSVVNNKKKVKASNSSDSEELSAGESAPKAQPAKAASAGMKAHHTRSPARIQSPGKCGKNGDKDSDLKEHGGRLPKIYKWSFQMSDLENMSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERERMSSSSSSSVLPGFVSGAPAEGAPGQGEPAGRGGWVGWAVPGRRPRPVDRLGTGTGRGRGSGRGGPGHGGASSGTRPSAKPGPRRATLRRAISRPVPSRRRCRARPPREAFVYRGRVHPSYLIPGTVNTPYFIVQTVLLLGV
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1177330..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193584..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269643))
location: region:1177330-1269643:-1
so has part: feature:1269638-1269643:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193584-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1177330-1177757:-1:exon

XP_028902941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1269638-1269643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1193584-1193754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1177330-1177757:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X1
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAVVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDERKQIDELLGKVVCVDYVSLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFASVPRKDVQEISSETAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSSKPCKECENAKEAKVHEEPAPEVKAVKAEEGATERKEEEKPTEEANERKENIKPPLGNRKNVPEPGVTQSDQEKESNREKNEEDERPEDKDDEISKVDEALGAKVEAEEEKGKAGDETNKEEEEDEEEAEEEEEEEVEEEEEEEEEEEEDVDDHNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFQTNTPPEMGSKVDSAEARNAEPAHVKSIEITSILNGLQASESSAEESERDAEPGPQRLESPGKKEPLGGPLGLDPSELRSKEEQGPSSAPEESQVLPEPGARKEPEEFSEASDSEEEDGATKKRKDAKKDPGDKAAKPQAKRGKRRFGGGGEDGAKTGSPSRKDDRTKGKEAPGLEPSSNSSSEDDEDEKSKGKGTPAKKYNGLEEKRKSLRTTVFYSGFSEVAEKRLKLLTNSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPRDGAAAGEEQPPAAEEERRPAGPRPGPDPDQPCPLGAEGKPVEEKAVEAGDKKADFPSSGSNSVLNTPPTTPESPASVTVTETGRQPSAVPAAEALAPNQEEVRSIKSETDSTIEVDSVAGELHDLRSEGNVSPTGFDASVSSGSSTQPEPEHPEKVCTGQKRVKEAQGGGSSAKKQKRNHKTSVVNNKKKVKASNSSDSEELSAGESAPKAQPAKAASAGMKAHHTRSPARIQSPGKCGKNGDKDSDLKEHGGRLPKIYKWSFQMSDLENMSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERERMSSSSSSSVLPGFVSGAPAEGAPGQGEPAGRGGWVGWAVPGRRPRPVDRLGTGTGRGRGSGRGGPGHGGASSGTRPSAKPGPRRATLRRAISRPVPSRRRCRARPPREAFVYRGRVHPSYLIPGTVNTPYFIVQTVLLLGV
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1177330..1177757,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193476..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269643))
location: region:1177330-1269643:-1
so has part: feature:1269638-1269643:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193476-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1177330-1177757:-1:exon

XP_028902940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1269638-1269643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1193476-1193754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1177330-1177757:-1:exon

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029047111.2
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1178529..1178918,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269692,1269932..1270112))
location: region:1178529-1270112:-1
so has part: feature:1269932-1270112:-1:exon
so has part: feature:1269638-1269692:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1178529-1178918:-1:exon

position:1178529:-1
position: 1178529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269932-1270112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269638-1269692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1178529-1178918:-1:exon

position:1178918:-1
position: 1178918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: ARID4B
product: AT-rich interaction domain 4B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029047109.2
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1178529..1178918,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193476..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269692,1269932..1270111))
location: region:1178529-1270111:-1
so has part: feature:1269932-1270111:-1:exon
so has part: feature:1269638-1269692:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193476-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1178529-1178918:-1:exon

position:1270111:-1
position: 1270111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269932-1270111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269638-1269692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1193476-1193754:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1178529-1178918:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X5
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAVVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDERKQIDELLGKVVCVDYVSLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFASVPRKDVQEISSETAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSSKPCKECENAKEAKVHEEPAPEVKAVKAEEGATERKEEEKPTEEANERKENIKPPLGNRKNVPEPGVTQSDQEKESNREKNEEDERPEDKDDEISKVDEALGAKVEAEEEKGKAGYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFQTNTPPEMGSKVDSAEARNAEPAHVKSIEITSILNGLQASESSAEESERDAEPGPQRLESPGKKEPLGGPLGLDPSELRSKEEQGPSSAPEESQVLPEPGARKEPEEFSEASDSEEEDGATKKRKDAKKDPGDKAAKPQAKRGKRRFGGGGEDGAKTGSPSRKDDRTKGKEAPGLEPSSNSSSEDDEDEKSKGKGTPAKKYNGLEEKRKSLRTTVFYSGFSEVAEKRLKLLTNSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPRDGAAAGEEQPPAAEEERRPAGPRPGPDPDQPCPLGAEGKPVEEKAVEAGDKKADFPSSGSNSVLNTPPTTPESPASVTVTETGRQPSAVPAAEALAPNQEEVRSIKSETDSTIEVDSVAGELHDLRSEGNVSPTGFDASVSSGSSTQPEPEHPEKVCTGQKRVKEAQGGGSSAKKQKRNHKTSVVNNKKKVKASNSSDSEELSAGESAPKAQPAKAASAGMKAHHTRSPARIQSPGKCGKNGDKDSDLKEHGGRLPKIYKWSFQMSDLENMSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATTSSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSITAAVMLTLAEPSMATAPQNGVSVECR
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1178728..1178918,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269643))
location: region:1178728-1269643:-1
so has part: feature:1269638-1269643:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1178728-1178918:-1:exon

XP_028902944.1
type: Protein
SIO_000068: ncbiprotein

position:1178728:-1
position: 1178728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269638-1269643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1178728-1178918:-1:exon

ARID4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: ARID4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 4B isoform X3
translation: MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGAVVEVKNADGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDERKQIDELLGKVVCVDYVSLDKKKVPGFPALVVCPDCSDEIAVKKDNILVRSFKDGKFASVPRKDVQEISSETAPKPDAVLKLAFDQALEFHKSRTIPSNWKTELKEDSSSSEAEEEEEEEEDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVQKLGGFDSIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVSSKPCKECENAKEAKVHEEPAPEVKAVKAEEGATERKEEEKPTEEANERKENIKPPLGNRKNVPEPGVTQSDQEKESNREKNEEDERPEDKDDEISKVDEALGAKVEAEEEKGKAGDETNKEEEEDEEEAEEEEEEEVEEEEEEEEEEEEDVDDHNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKIDKEKDKDEKYSPKNCKLRRLSKPPFQTNTPPEMGSKVDSAEARNAEPAHVKSIEITSILNGLQASESSAEESERDAEPGPQRLESPGKKEPLGGPLGLDPSELRSKEEQGPSSAPEESQVLPEPGARKEPEEFSEASDSEEEDGATKKRKDAKKDPGDKAAKPQAKRGKRRFGGGGEDGAKTGSPSRKDDRTKGKEAPGLEPSSNSSSEDDEDEKSKGKGTPAKKYNGLEEKRKSLRTTVFYSGFSEVAEKRLKLLTNSDERPPASRAKDRKDVWSSIQGQWPKKTLKELFSDSDTETAASPPHASPRDGAAAGEEQPPAAEEERRPAGPRPGPDPDQPCPLGAEGKPVEEKAVEAGDKKADFPSSGSNSVLNTPPTTPESPASVTVTETGRQPSAVPAAEALAPNQEEVRSIKSETDSTIEVDSVAGELHDLRSEGNVSPTGFDASVSSGSSTQPEPEHPEKVCTGQKRVKEAQGGGSSAKKQKRNHKTSVVNNKKKVKASNSSDSEELSAGESAPKAQPAKAASAGMKAHHTRSPARIQSPGKCGKNGDKDSDLKEHGGRLPKIYKWSFQMSDLENMSSAERIAILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATTSSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSITAAVMLTLAEPSMATAPQNGVSVECR
SIO_010081: ARID4B
subclass of: SO_0000673
so part of: ARID4B
location: complement(join(1178728..1178918,1179875..1180021,1180795..1181010,1182727..1182840,1183756..1184955,1185632..1185830,1187230..1187314,1193476..1193754,1197960..1198135,1199583..1199826,1200971..1201068,1202589..1202683,1203471..1203543,1206189..1206343,1208822..1208898,1211014..1211093,1215046..1215184,1218908..1218999,1221695..1221774,1225317..1225407,1227878..1227943,1230276..1230386,1269638..1269643))
location: region:1178728-1269643:-1
so has part: feature:1269638-1269643:-1:exon
so has part: feature:1230276-1230386:-1:exon
so has part: feature:1227878-1227943:-1:exon
so has part: feature:1225317-1225407:-1:exon
so has part: feature:1221695-1221774:-1:exon
so has part: feature:1218908-1218999:-1:exon
so has part: feature:1215046-1215184:-1:exon
so has part: feature:1211014-1211093:-1:exon
so has part: feature:1208822-1208898:-1:exon
so has part: feature:1206189-1206343:-1:exon
so has part: feature:1203471-1203543:-1:exon
so has part: feature:1202589-1202683:-1:exon
so has part: feature:1200971-1201068:-1:exon
so has part: feature:1199583-1199826:-1:exon
so has part: feature:1197960-1198135:-1:exon
so has part: feature:1193476-1193754:-1:exon
so has part: feature:1187230-1187314:-1:exon
so has part: feature:1185632-1185830:-1:exon
so has part: feature:1183756-1184955:-1:exon
so has part: feature:1182727-1182840:-1:exon
so has part: feature:1180795-1181010:-1:exon
so has part: feature:1179875-1180021:-1:exon
so has part: feature:1178728-1178918:-1:exon

XP_028902942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1269638-1269643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230276-1230386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227878-1227943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225317-1225407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221695-1221774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218908-1218999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215046-1215184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211014-1211093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208822-1208898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206189-1206343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203471-1203543:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202589-1202683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1200971-1201068:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199583-1199826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197960-1198135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1193476-1193754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187230-1187314:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185632-1185830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183756-1184955:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1182727-1182840:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1180795-1181010:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1179875-1180021:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1178728-1178918:-1:exon

GGPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1270420..1286880
location: region:1270420-1286880:1
so has part: feature:1270420-1286880:1:exon
subclass of: SO_0000010

100081573
type: Gene
SIO_000068: ncbigene

position:1270420:1
position: 1270420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286880:1
position: 1286880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270420-1286880:1:exon

GGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GGPS1
product: geranylgeranyl diphosphate synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_007670316.3
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1270420..1270615,1276933..1277028,1283841..1283911,1284131..1286880)
location: region:1270420-1286880:1
so has part: feature:1270420-1270615:1:exon
so has part: feature:1276933-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1286880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1270420-1270615:1:exon

position:1270615:1
position: 1270615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1276933-1277028:1:exon

position:1276933:1
position: 1276933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277028:1
position: 1277028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283841-1283911:1:exon

position:1283841:1
position: 1283841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283911:1
position: 1283911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1286880:1:exon

position:1284131:1
position: 1284131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GGPS1
product: geranylgeranyl diphosphate synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_001512293.4
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1270778..1271983,1276933..1277028,1283841..1283911,1284131..1286880)
location: region:1270778-1286880:1
so has part: feature:1270778-1271983:1:exon
so has part: feature:1276933-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1286880:1:exon

position:1270778:1
position: 1270778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270778-1271983:1:exon

position:1271983:1
position: 1271983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1276933-1277028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283841-1283911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1286880:1:exon

GGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GGPS1
product: geranylgeranyl diphosphate synthase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039914787.1
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1270778..1271548,1271929..1271983,1276933..1277028,1283841..1283911,1284131..1286880)
location: region:1270778-1286880:1
so has part: feature:1270778-1271548:1:exon
so has part: feature:1271929-1271983:1:exon
so has part: feature:1276933-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1286880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1270778-1271548:1:exon

position:1271548:1
position: 1271548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1271929-1271983:1:exon

position:1271929:1
position: 1271929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1276933-1277028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283841-1283911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284131-1286880:1:exon

GGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase
translation: MEVTQEASERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKKYCVHYLEDVGSFEYTRQTLKALESEAYTQIEALGGNPELVALIRHLSKMFREDDEN
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1276959..1277028,1283841..1283911,1284131..1284895)
location: region:1276959-1284895:1
so has part: feature:1276959-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1284895:1:exon

XP_001512343.1
type: Protein
SIO_000068: ncbiprotein

position:1276959:1
position: 1276959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284895:1
position: 1284895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276959-1277028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283841-1283911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284131-1284895:1:exon

GGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase
translation: MEVTQEASERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKKYCVHYLEDVGSFEYTRQTLKALESEAYTQIEALGGNPELVALIRHLSKMFREDDEN
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1276959..1277028,1283841..1283911,1284131..1284895)
location: region:1276959-1284895:1
so has part: feature:1276959-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1284895:1:exon

XP_039770721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1276959-1277028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283841-1283911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284131-1284895:1:exon

GGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase
translation: MEVTQEASERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKKYCVHYLEDVGSFEYTRQTLKALESEAYTQIEALGGNPELVALIRHLSKMFREDDEN
SIO_010081: GGPS1
subclass of: SO_0000673
so part of: GGPS1
location: join(1276959..1277028,1283841..1283911,1284131..1284895)
location: region:1276959-1284895:1
so has part: feature:1276959-1277028:1:exon
so has part: feature:1283841-1283911:1:exon
so has part: feature:1284131-1284895:1:exon

XP_007668506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1276959-1277028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283841-1283911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284131-1284895:1:exon

TBCE
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1294969..1316365
location: region:1294969-1316365:1
so has part: feature:1294969-1316365:1:exon
subclass of: SO_0000010

100081621
type: Gene
SIO_000068: ncbigene

position:1294969:1
position: 1294969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316365:1
position: 1316365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294969-1316365:1:exon

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TBCE
product: tubulin folding cofactor E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_029047015.2
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1294969..1295116,1297831..1297941,1301268..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315794..1315945,1316137..1316365)
location: region:1294969-1316365:1
so has part: feature:1294969-1295116:1:exon
so has part: feature:1297831-1297941:1:exon
so has part: feature:1301268-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315794-1315945:1:exon
so has part: feature:1316137-1316365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294969-1295116:1:exon

position:1295116:1
position: 1295116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297831-1297941:1:exon

position:1297831:1
position: 1297831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297941:1
position: 1297941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1301268-1301393:1:exon

position:1301268:1
position: 1301268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301393:1
position: 1301393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1304174-1304258:1:exon

position:1304174:1
position: 1304174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304258:1
position: 1304258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1305152-1305337:1:exon

position:1305152:1
position: 1305152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305337:1
position: 1305337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1306209-1306297:1:exon

position:1306209:1
position: 1306209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306297:1
position: 1306297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1307677-1307776:1:exon

position:1307677:1
position: 1307677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307776:1
position: 1307776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1308476-1308581:1:exon

position:1308476:1
position: 1308476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308581:1
position: 1308581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1309658-1309734:1:exon

position:1309658:1
position: 1309658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309734:1
position: 1309734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1310145-1310240:1:exon

position:1310145:1
position: 1310145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310240:1
position: 1310240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1312010-1312074:1:exon

position:1312010:1
position: 1312010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312074:1
position: 1312074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1312167-1312231:1:exon

position:1312167:1
position: 1312167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312231:1
position: 1312231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1312979-1313131:1:exon

position:1312979:1
position: 1312979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313131:1
position: 1313131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1313428-1313581:1:exon

position:1313428:1
position: 1313428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313581:1
position: 1313581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1314080-1314148:1:exon

position:1314080:1
position: 1314080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314148:1
position: 1314148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1314631-1314690:1:exon

position:1314631:1
position: 1314631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314690:1
position: 1314690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1315794-1315945:1:exon

position:1315794:1
position: 1315794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315945:1
position: 1315945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1316137-1316365:1:exon

position:1316137:1
position: 1316137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TBCE
product: tubulin folding cofactor E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_029047017.2
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1294969..1295116,1297831..1297941,1301268..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315854..1315945,1316137..1316365)
location: region:1294969-1316365:1
so has part: feature:1294969-1295116:1:exon
so has part: feature:1297831-1297941:1:exon
so has part: feature:1301268-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315854-1315945:1:exon
so has part: feature:1316137-1316365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294969-1295116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1297831-1297941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1301268-1301393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1304174-1304258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305152-1305337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1306209-1306297:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307677-1307776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308476-1308581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309658-1309734:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1310145-1310240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312010-1312074:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312167-1312231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312979-1313131:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1313428-1313581:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1314080-1314148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1314631-1314690:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1315854-1315945:1:exon

position:1315854:1
position: 1315854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1316137-1316365:1:exon

TBCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: TBCE
product: tubulin folding cofactor E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_029047016.2
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1294969..1295116,1301268..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315794..1315945,1316137..1316365)
location: region:1294969-1316365:1
so has part: feature:1294969-1295116:1:exon
so has part: feature:1301268-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315794-1315945:1:exon
so has part: feature:1316137-1316365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294969-1295116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301268-1301393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304174-1304258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305152-1305337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306209-1306297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307677-1307776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1308476-1308581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1309658-1309734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1310145-1310240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1312010-1312074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312167-1312231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312979-1313131:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313428-1313581:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314080-1314148:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1314631-1314690:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315794-1315945:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1316137-1316365:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X1
translation: MSDPLPPDAVGRRIDVSGELATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGGHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVRREQALVIGNRPVETVGFESIKKRQSQLNRLQEVSVCGYAVNCAGPEGEITKMCPNIRKIDLSKNLLSSWDEVTRIADQLTDLEVLNLSENKLKFPPVDAPPSPGTFSALKVLVLNRTGITWTEVVRCASGWPVLEELYLAANDLAIASRPPDALQTLRLLDLSGNPLVDENHLRFLASLPRLEQLILSNTGLSSIHFPDAGIGSRTAMFPSLQYLVVSGNQITQWSFIDELDKLRSLRSLTCTRTPLTEGSEEPQTVRQLIIAKIGRLKTLNRCEISPEERQGAELDYRKKFGNEWKAAGGHQKPELDEPGAEFLAAHPRYRLLCLKYGAPEDGELKAQQPFMLKNQLLTLTIKCPDRPAQKLIQRQLPGAPAAPDRNVRPKAFPSRLADSMTVQKVKGLLSRLFRVPGSELRLSYESPKMEGREIRLESDQQPLQFYSVENGDCLLARW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1301294..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315794..1315945,1316137..1316229)
location: region:1301294-1316229:1
so has part: feature:1301294-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315794-1315945:1:exon
so has part: feature:1316137-1316229:1:exon

XP_028902848.1
type: Protein
SIO_000068: ncbiprotein

position:1301294:1
position: 1301294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316229:1
position: 1316229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301294-1301393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304174-1304258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305152-1305337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306209-1306297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307677-1307776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1308476-1308581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309658-1309734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1310145-1310240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1312010-1312074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1312167-1312231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312979-1313131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313428-1313581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314080-1314148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314631-1314690:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315794-1315945:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316137-1316229:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X1
translation: MSDPLPPDAVGRRIDVSGELATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGGHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVRREQALVIGNRPVETVGFESIKKRQSQLNRLQEVSVCGYAVNCAGPEGEITKMCPNIRKIDLSKNLLSSWDEVTRIADQLTDLEVLNLSENKLKFPPVDAPPSPGTFSALKVLVLNRTGITWTEVVRCASGWPVLEELYLAANDLAIASRPPDALQTLRLLDLSGNPLVDENHLRFLASLPRLEQLILSNTGLSSIHFPDAGIGSRTAMFPSLQYLVVSGNQITQWSFIDELDKLRSLRSLTCTRTPLTEGSEEPQTVRQLIIAKIGRLKTLNRCEISPEERQGAELDYRKKFGNEWKAAGGHQKPELDEPGAEFLAAHPRYRLLCLKYGAPEDGELKAQQPFMLKNQLLTLTIKCPDRPAQKLIQRQLPGAPAAPDRNVRPKAFPSRLADSMTVQKVKGLLSRLFRVPGSELRLSYESPKMEGREIRLESDQQPLQFYSVENGDCLLARW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1301294..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315794..1315945,1316137..1316229)
location: region:1301294-1316229:1
so has part: feature:1301294-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315794-1315945:1:exon
so has part: feature:1316137-1316229:1:exon

XP_028902849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1301294-1301393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304174-1304258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305152-1305337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306209-1306297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307677-1307776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1308476-1308581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309658-1309734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1310145-1310240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1312010-1312074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1312167-1312231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312979-1313131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313428-1313581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314080-1314148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314631-1314690:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315794-1315945:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316137-1316229:1:exon

TBCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: TBCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E isoform X2
translation: MSDPLPPDAVGRRIDVSGELATVRYVGSVPPTAGVWLGVEWDNPQRGKHDGGHEGTVYFKCRNPTGGSFIRPNKANFGVDFLTAIKNRYVLEDEEEDVRREQALVIGNRPVETVGFESIKKRQSQLNRLQEVSVCGYAVNCAGPEGEITKMCPNIRKIDLSKNLLSSWDEVTRIADQLTDLEVLNLSENKLKFPPVDAPPSPGTFSALKVLVLNRTGITWTEVVRCASGWPVLEELYLAANDLAIASRPPDALQTLRLLDLSGNPLVDENHLRFLASLPRLEQLILSNTGLSSIHFPDAGIGSRTAMFPSLQYLVVSGNQITQWSFIDELDKLRSLRSLTCTRTPLTEGSEEPQTVRQLIIAKIGRLKTLNRCEISPEERQGAELDYRKKFGNEWKAAGGHQKPELDEPGAEFLAAHPRYRLLCLKYGAPEDGELKAQQPFMLKNQLLTLTIKCPDRPAQKLIQRQLPDSMTVQKVKGLLSRLFRVPGSELRLSYESPKMEGREIRLESDQQPLQFYSVENGDCLLARW
SIO_010081: TBCE
subclass of: SO_0000673
so part of: TBCE
location: join(1301294..1301393,1304174..1304258,1305152..1305337,1306209..1306297,1307677..1307776,1308476..1308581,1309658..1309734,1310145..1310240,1312010..1312074,1312167..1312231,1312979..1313131,1313428..1313581,1314080..1314148,1314631..1314690,1315854..1315945,1316137..1316229)
location: region:1301294-1316229:1
so has part: feature:1301294-1301393:1:exon
so has part: feature:1304174-1304258:1:exon
so has part: feature:1305152-1305337:1:exon
so has part: feature:1306209-1306297:1:exon
so has part: feature:1307677-1307776:1:exon
so has part: feature:1308476-1308581:1:exon
so has part: feature:1309658-1309734:1:exon
so has part: feature:1310145-1310240:1:exon
so has part: feature:1312010-1312074:1:exon
so has part: feature:1312167-1312231:1:exon
so has part: feature:1312979-1313131:1:exon
so has part: feature:1313428-1313581:1:exon
so has part: feature:1314080-1314148:1:exon
so has part: feature:1314631-1314690:1:exon
so has part: feature:1315854-1315945:1:exon
so has part: feature:1316137-1316229:1:exon

XP_028902850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1301294-1301393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304174-1304258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305152-1305337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306209-1306297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307677-1307776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1308476-1308581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309658-1309734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1310145-1310240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1312010-1312074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1312167-1312231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312979-1313131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313428-1313581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314080-1314148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314631-1314690:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315854-1315945:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316137-1316229:1:exon

B3GALNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1315738..1328872)
location: region:1315738-1328872:-1
so has part: feature:1315738-1328872:-1:exon
subclass of: SO_0000010

100081648
type: Gene
SIO_000068: ncbigene

position:1315738:-1
position: 1315738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328872:-1
position: 1328872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315738-1328872:-1:exon

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039914869.1
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1315738..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319515..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328872))
location: region:1315738-1328872:-1
so has part: feature:1328733-1328872:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319515-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1315738-1317077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328872:-1:exon

position:1328733:-1
position: 1328733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

position:1324420:-1
position: 1324420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324567:-1
position: 1324567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

position:1323885:-1
position: 1323885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324048:-1
position: 1324048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

position:1323088:-1
position: 1323088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323281:-1
position: 1323281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

position:1322766:-1
position: 1322766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322861:-1
position: 1322861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

position:1321517:-1
position: 1321517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321627:-1
position: 1321627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

position:1320501:-1
position: 1320501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320579:-1
position: 1320579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1319515-1319695:-1:exon

position:1319515:-1
position: 1319515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319695:-1
position: 1319695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

position:1319235:-1
position: 1319235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319360:-1
position: 1319360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

position:1317590:-1
position: 1317590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317749:-1
position: 1317749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

position:1317335:-1
position: 1317335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317391:-1
position: 1317391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1315738-1317077:-1:exon

position:1317077:-1
position: 1317077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029047012.2
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1315738..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328871))
location: region:1315738-1328871:-1
so has part: feature:1328733-1328871:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1315738-1317077:-1:exon

position:1328871:-1
position: 1328871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

position:1319512:-1
position: 1319512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1315738-1317077:-1:exon

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_029047013.2
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1315738..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1323985,1324420..1324567,1328733..1328870))
location: region:1315738-1328870:-1
so has part: feature:1328733-1328870:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1323985:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1315738-1317077:-1:exon

position:1328870:-1
position: 1328870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1323985:-1:exon

position:1323985:-1
position: 1323985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1315738-1317077:-1:exon

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X3
translation: MRSCALVLGPCLLGAALHLWLRLRPAPAGQPAEPRQGEAGHVDVVVGVLSARHHHDLRAVIRATWLNHLKRHPALSQRVLVKFIIGARGCGVPVEDREDPYSCRLLNITNPVLNQEIEAFGLPEETPAEDREDRVVSVSFRVLYPIVITSLGVFYDAGEAGFQRNITVRLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGVIVWESQDLHGLVSKNLHTVTVNDGGGVLRVNTAGEGSLPHEFLEGVEGVAGGFIYTIQDGDALLRNLHTRPERFLRHVAGLREEDALLRAESAAYDDIVFVDIVDTYRNVPAKLLNFYRWTVRTASFDLLLKTDDDCYVDLEAAFNRIARKDLRRPNLWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVQWLAGNAERLKTYQGEDVSMGIWMAALGPKRFQDSLWLCEKTCEPGMLSSPQYSPRELAELWRLKESCGDPCRCGAG
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1316943..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1323985,1324420..1324567,1328733..1328817))
location: region:1316943-1328817:-1
so has part: feature:1328733-1328817:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1323985:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1316943-1317077:-1:exon

XP_028902846.1
type: Protein
SIO_000068: ncbiprotein

position:1316943:-1
position: 1316943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328817:-1
position: 1328817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1323985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1316943-1317077:-1:exon

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X2
translation: MRSCALVLGPCLLGAALHLWLRLRPAPAGQPAEPRQGEAGHVDVVVGVLSARHHHDLRAVIRATWLNHLKRHPALSQRKRLTDTVRTKRRRLIVNQSLSVLVKFIIGARGCGVPVEDREDPYSCRLLNITNPVLNQEIEAFGLPEETPAEDREDRVVSVSFRVLYPIVITSLGVFYDAGEAGFQRNITVRLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGVIVWESQDLHGLVSKNLHTVTVNDGGGVLRVNTAGEGSLPHEFLEGVEGVAGGFIYTIQDGDALLRNLHTRPERFLRHVAGLREEDALLRAESAAYDDIVFVDIVDTYRNVPAKLLNFYRTVRTASFDLLLKTDDDCYVDLEAAFNRIARKDLRRPNLWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVQWLAGNAERLKTYQGEDVSMGIWMAALGPKRFQDSLWLCEKTCEPGMLSSPQYSPRELAELWRLKESCGDPCRCGAG
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1316943..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319515..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328817))
location: region:1316943-1328817:-1
so has part: feature:1328733-1328817:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319515-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1316943-1317077:-1:exon

XP_039770803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319515-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1316943-1317077:-1:exon

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1
translation: MRSCALVLGPCLLGAALHLWLRLRPAPAGQPAEPRQGEAGHVDVVVGVLSARHHHDLRAVIRATWLNHLKRHPALSQRKRLTDTVRTKRRRLIVNQSLSVLVKFIIGARGCGVPVEDREDPYSCRLLNITNPVLNQEIEAFGLPEETPAEDREDRVVSVSFRVLYPIVITSLGVFYDAGEAGFQRNITVRLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGVIVWESQDLHGLVSKNLHTVTVNDGGGVLRVNTAGEGSLPHEFLEGVEGVAGGFIYTIQDGDALLRNLHTRPERFLRHVAGLREEDALLRAESAAYDDIVFVDIVDTYRNVPAKLLNFYRWTVRTASFDLLLKTDDDCYVDLEAAFNRIARKDLRRPNLWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVQWLAGNAERLKTYQGEDVSMGIWMAALGPKRFQDSLWLCEKTCEPGMLSSPQYSPRELAELWRLKESCGDPCRCGAG
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1316943..1317077,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328817))
location: region:1316943-1328817:-1
so has part: feature:1328733-1328817:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1316943-1317077:-1:exon

XP_028902845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1316943-1317077:-1:exon

B3GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: B3GALNT2
product: beta-1,3-N-acetylgalactosaminyltransferase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029047014.2
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1316971..1317072,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328871))
location: region:1316971-1328871:-1
so has part: feature:1328733-1328871:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1316971-1317072:-1:exon

position:1316971:-1
position: 1316971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1316971-1317072:-1:exon

position:1317072:-1
position: 1317072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: B3GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X4
translation: MRSCALVLGPCLLGAALHLWLRLRPAPAGQPAEPRQGEAGHVDVVVGVLSARHHHDLRAVIRATWLNHLKRHPALSQRKRLTDTVRTKRRRLIVNQSLSVLVKFIIGARGCGVPVEDREDPYSCRLLNITNPVLNQEIEAFGLPEETPAEDREDRVVSVSFRVLYPIVITSLGVFYDAGEAGFQRNITVRLYQAEQEEALLSARFSPPSCGVQVNRLWYKPVEQFILPESFEGVIVWESQDLHGLVSKNLHTVTVNDGGGVLRVNTAGEGSLPHEFLEGVEGVAGGFIYTIQDGDALLRNLHTRPERFLRHVAGLREEDALLRAESAAYDDIVFVDIVDTYRNVPAKLLNFYRWTVRTASFDLLLKTDDDCYVDLEAAFNRIARKDLRRPNLWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISRDIVQWLAGNAERLKTYQGEDVSMGIWMAALGPKRFQPVAL
SIO_010081: B3GALNT2
subclass of: SO_0000673
so part of: B3GALNT2
location: complement(join(1317058..1317072,1317335..1317391,1317590..1317749,1319235..1319360,1319512..1319695,1320501..1320579,1321517..1321627,1322766..1322861,1323088..1323281,1323885..1324048,1324420..1324567,1328733..1328817))
location: region:1317058-1328817:-1
so has part: feature:1328733-1328817:-1:exon
so has part: feature:1324420-1324567:-1:exon
so has part: feature:1323885-1324048:-1:exon
so has part: feature:1323088-1323281:-1:exon
so has part: feature:1322766-1322861:-1:exon
so has part: feature:1321517-1321627:-1:exon
so has part: feature:1320501-1320579:-1:exon
so has part: feature:1319512-1319695:-1:exon
so has part: feature:1319235-1319360:-1:exon
so has part: feature:1317590-1317749:-1:exon
so has part: feature:1317335-1317391:-1:exon
so has part: feature:1317058-1317072:-1:exon

XP_028902847.1
type: Protein
SIO_000068: ncbiprotein

position:1317058:-1
position: 1317058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328733-1328817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324420-1324567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323885-1324048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1323088-1323281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322766-1322861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1321517-1321627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320501-1320579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319512-1319695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319235-1319360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317590-1317749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317335-1317391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317058-1317072:-1:exon

LOC114805718
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LOC114805718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1329086..1332652
location: region:1329086-1332652:1
so has part: feature:1329086-1332652:1:exon
subclass of: SO_0000011

114805718
type: Gene
SIO_000068: ncbigene

position:1329086:1
position: 1329086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332652:1
position: 1332652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329086-1332652:1:exon

LOC114805718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805718
product: uncharacterized LOC114805718, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003753740.2
SIO_010081: LOC114805718
subclass of: SO_0000673
so part of: LOC114805718
location: join(1329086..1329167,1330896..1331095,1332511..1332652)
location: region:1329086-1332652:1
so has part: feature:1329086-1329167:1:exon
so has part: feature:1330896-1331095:1:exon
so has part: feature:1332511-1332652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1329086-1329167:1:exon

position:1329167:1
position: 1329167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1330896-1331095:1:exon

position:1330896:1
position: 1330896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331095:1
position: 1331095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1332511-1332652:1:exon

position:1332511:1
position: 1332511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114805718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9258
nc RNA class: lncRNA
gene: LOC114805718
product: uncharacterized LOC114805718, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003753741.2
SIO_010081: LOC114805718
subclass of: SO_0000673
so part of: LOC114805718
location: join(1329091..1329171,1330896..1331095,1332511..1332652)
location: region:1329091-1332652:1
so has part: feature:1329091-1329171:1:exon
so has part: feature:1330896-1331095:1:exon
so has part: feature:1332511-1332652:1:exon

position:1329091:1
position: 1329091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329091-1329171:1:exon

position:1329171:1
position: 1329171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1330896-1331095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1332511-1332652:1:exon

GNG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: GNG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1337569..1350847)
location: region:1337569-1350847:-1
so has part: feature:1337569-1350847:-1:exon
subclass of: SO_0000010

114805646
type: Gene
SIO_000068: ncbigene

position:1337569:-1
position: 1337569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350847:-1
position: 1350847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337569-1350847:-1:exon

GNG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: GNG4
product: G protein subunit gamma 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029046970.1
SIO_010081: GNG4
subclass of: SO_0000673
so part of: GNG4
location: complement(join(1337569..1338222,1343594..1343702,1343807..1343930,1350780..1350847))
location: region:1337569-1350847:-1
so has part: feature:1350780-1350847:-1:exon
so has part: feature:1343807-1343930:-1:exon
so has part: feature:1343594-1343702:-1:exon
so has part: feature:1337569-1338222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350780-1350847:-1:exon

position:1350780:-1
position: 1350780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343807-1343930:-1:exon

position:1343807:-1
position: 1343807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343930:-1
position: 1343930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1343594-1343702:-1:exon

position:1343594:-1
position: 1343594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343702:-1
position: 1343702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1337569-1338222:-1:exon

position:1338222:-1
position: 1338222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9258
gene: GNG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
translation: MKDIMSNSSTTSVSQARKAVEQLKMEACMDRIKVSKAAADLLAYCDAHLREDPLIIPVPASENPFREKKFFCTIL
SIO_010081: GNG4
subclass of: SO_0000673
so part of: GNG4
location: complement(join(1338094..1338222,1343594..1343692))
location: region:1338094-1343692:-1
so has part: feature:1343594-1343692:-1:exon
so has part: feature:1338094-1338222:-1:exon

XP_028902803.1
type: Protein
SIO_000068: ncbiprotein

position:1338094:-1
position: 1338094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343692:-1
position: 1343692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343594-1343692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338094-1338222:-1:exon

LYST
type: Gene
subclass of: SO_0000704
RO_0002162: 9258
gene: LYST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1356384..1460741)
location: region:1356384-1460741:-1
so has part: feature:1356384-1460741:-1:exon
subclass of: SO_0000010

100081827
type: Gene
SIO_000068: ncbigene

position:1356384:-1
position: 1356384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460741:-1
position: 1460741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356384-1460741:-1:exon

LYST
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9258
gene: LYST
product: lysosomal trafficking regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029047008.1
SIO_010081: LYST
subclass of: SO_0000673
so part of: LYST
location: complement(join(1356384..1358503,1359170..1359241,1360046..1360202,1363635..1363732,1364210..1364349,1366265..1366363,1367009..1367145,1370982..1371171,1374530..1374760,1375930..1376147,1377595..1377735,1379448..1379604,1380777..1380843,1382527..1382771,1383350..1383502,1386099..1386154,1389116..1389177,1389769..1389865,1389964..1390109,1392139..1392327,1392446..1392522,1393627..1393800,1396782..1396988,1398574..1398752,1400239..1400430,1404299..1404451,1405084..1405250,1407522..1407752,1409017..1409186,1410303..1410480,1412188..1412791,1413230..1413361,1414953..1415151,1416635..1416772,1417553..1417702,1418220..1418393,1419128..1419373,1420043..1420233,1422809..1422969,1424319..1424492,1425452..1425596,1426603..1427029,1427588..1427697,1428811..1428877,1429965..1430191,1430948..1431104,1431576..1431737,1432507..1433446,1434600..1436571,1438139..1438229,1439379..1439577,1441971..1442061,1460665..1460741))
location: region:1356384-1460741:-1
so has part: feature:1460665-1460741:-1:exon
so has part: feature:1441971-1442061:-1:exon
so has part: feature:1439379-1439577:-1:exon
so has part: feature:1438139-1438229:-1:exon
so has part: feature:1434600-1436571:-1:exon
so has part: feature:1432507-1433446:-1:exon
so has part: feature:1431576-1431737:-1:exon
so has part: feature:1430948-1431104:-1:exon
so has part: feature:1429965-1430191:-1:exon
so has part: feature:1428811-1428877:-1:exon
so has part: feature:1427588-1427697:-1:exon
so has part: feature:1426603-1427029:-1:exon
so has part: feature:1425452-1425596:-1:exon
so has part: feature:1424319-1424492:-1:exon
so has part: feature:1422809-1422969:-1:exon
so has part: feature:1420043-1420233:-1:exon
so has part: feature:1419128-1419373:-1:exon
so has part: feature:1418220-1418393:-1:exon
so has part: feature:1417553-1417702:-1:exon
so has part: feature:1416635-1416772:-1:exon
so has part: feature:1414953-1415151:-1:exon
so has part: feature:1413230-1413361:-1:exon
so has part: feature:1412188-1412791:-1:exon
so has part: feature:1410303-1410480:-1:exon
so has part: feature:1409017-1409186:-1:exon
so has part: feature:1407522-1407752:-1:exon
so has part: feature:1405084-1405250:-1:exon
so has part: feature:1404299-1404451:-1:exon
so has part: feature:1400239-1400430:-1:exon
so has part: feature:1398574-1398752:-1:exon
so has part: feature:1396782-1396988:-1:exon
so has part: feature:1393627-1393800:-1:exon
so has part: feature:1392446-1392522:-1:exon
so has part: feature:1392139-1392327:-1:exon
so has part: feature:1389964-1390109:-1:exon
so has part: feature:1389769-1389865:-1:exon
so has part: feature:1389116-1389177:-1:exon
so has part: feature:1386099-1386154:-1:exon
so has part: feature:1383350-1383502:-1:exon
so has part: feature:1382527-1382771:-1:exon
so has part: feature:1380777-1380843:-1:exon
so has part: feature:1379448-1379604:-1:exon
so has part: feature:1377595-1377735:-1:exon
so has part: feature:1375930-1376147:-1:exon
so has part: feature:1374530-1374760:-1:exon
so has part: feature:1370982-1371171:-1:exon
so has part: feature:1367009-1367145:-1:exon
so has part: feature:1366265-1366363:-1:exon
so has part: feature:1364210-1364349:-1:exon
so has part: feature:1363635-1363732:-1:exon
so has part: feature:1360046-1360202:-1:exon
so has part: feature:1359170-1359241:-1:exon
so has part: feature:1356384-1358503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1460665-1460741:-1:exon

position:1460665:-1
position: 1460665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1441971-1442061:-1:exon

position:1441971:-1
position: 1441971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442061:-1
position: 1442061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1439379-1439577:-1:exon

position:1439379:-1
position: 1439379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439577:-1
position: 1439577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438139-1438229:-1:exon

position:1438139:-1
position: 1438139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438229:-1
position: 1438229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1434600-1436571:-1:exon

position:1434600:-1
position: 1434600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436571:-1
position: 1436571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1432507-1433446:-1:exon

position:1432507:-1
position: 1432507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433446:-1
position: 1433446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1431576-1431737:-1:exon

position:1431576:-1
position: 1431576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431737:-1
position: 1431737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1430948-1431104:-1:exon

position:1430948:-1
position: 1430948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431104:-1
position: 1431104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1429965-1430191:-1:exon

position:1429965:-1
position: 1429965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430191:-1
position: 1430191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1428811-1428877:-1:exon

position:1428811:-1
position: 1428811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428877:-1
position: 1428877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1427588-1427697:-1:exon

position:1427588:-1
position: 1427588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427697:-1
position: 1427697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1426603-1427029:-1:exon

position:1426603:-1
position: 1426603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427029:-1
position: 1427029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1425452-1425596:-1:exon

position:1425452:-1
position: 1425452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425596:-1
position: 1425596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1424319-1424492:-1:exon

position:1424319:-1
position: 1424319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424492:-1
position: 1424492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1422809-1422969:-1:exon

position:1422809:-1
position: 1422809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422969:-1
position: 1422969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1420043-1420233:-1:exon

position:1420043:-1
position: 1420043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420233:-1
position: 1420233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1419128-1419373:-1:exon

position:1419128:-1
position: 1419128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419373:-1
position: 1419373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1418220-1418393:-1:exon

position:1418220:-1
position: 1418220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418393:-1
position: 1418393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1417553-1417702:-1:exon

position:1417553:-1
position: 1417553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417702:-1
position: 1417702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1416635-1416772:-1:exon

position:1416635:-1
position: 1416635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416772:-1
position: 1416772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1414953-1415151:-1:exon

position:1414953:-1
position: 1414953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415151:-1
position: 1415151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1413230-1413361:-1:exon

position:1413230:-1
position: 1413230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413361:-1
position: 1413361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1412188-1412791:-1:exon

position:1412188:-1
position: 1412188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412791:-1
position: 1412791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1410303-1410480:-1:exon

position:1410303:-1
position: 1410303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410480:-1
position: 1410480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1409017-1409186:-1:exon

position:1409017:-1
position: 1409017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409186:-1
position: 1409186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1407522-1407752:-1:exon

position:1407522:-1
position: 1407522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407752:-1
position: 1407752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1405084-1405250:-1:exon

position:1405084:-1
position: 1405084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405250:-1
position: 1405250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1404299-1404451:-1:exon

position:1404299:-1
position: 1404299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404451:-1
position: 1404451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1400239-1400430:-1:exon

position:1400239:-1
position: 1400239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400430:-1
position: 1400430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1398574-1398752:-1:exon

position:1398574:-1
position: 1398574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398752:-1
position: 1398752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1396782-1396988:-1:exon

position:1396782:-1
position: 1396782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396988:-1
position: 1396988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1393627-1393800:-1:exon

position:1393627:-1
position: 1393627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393800:-1
position: 1393800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1392446-1392522:-1:exon

position:1392446:-1
position: 1392446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392522:-1
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SIO_000300: 34
SIO_000628: feature:1392139-1392327:-1:exon

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SIO_000300: 35
SIO_000628: feature:1389964-1390109:-1:exon

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SIO_000300: 36
SIO_000628: feature:1389769-1389865:-1:exon

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SIO_000300: 37
SIO_000628: feature:1389116-1389177:-1:exon

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SIO_000300: 38
SIO_000628: feature:1386099-1386154:-1:exon

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SIO_000300: 39
SIO_000628: feature:1383350-1383502:-1:exon

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SIO_000300: 40
SIO_000628: feature:1382527-1382771:-1:exon

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SIO_000300: 41
SIO_000628: feature:1380777-1380843:-1:exon