Calypte anna isolate BGI_N300 chromosome 33, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 33, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044275.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044275.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012141.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1888140
topology: linear
so has quality: SO_0000987
location: 1..1888140
location: region:1-1888140:1
RO_0002162: 9244

NC_044275
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888140:1
position: 1888140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1888140:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 33
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1801..19316
location: region:1801-19316:1
so has part: feature:1801-19316:1:exon
subclass of: SO_0000010

103537845
type: Gene
SIO_000068: ncbigene

position:1801:1
position: 1801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19316:1
position: 19316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1801-19316:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468188.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(1801..1848,3891..4331,8265..8373,9184..9338,11494..11601,13479..13536,13942..14057,16645..16778,17126..19316)
location: region:1801-19316:1
so has part: feature:1801-1848:1:exon
so has part: feature:3891-4331:1:exon
so has part: feature:8265-8373:1:exon
so has part: feature:9184-9338:1:exon
so has part: feature:11494-11601:1:exon
so has part: feature:13479-13536:1:exon
so has part: feature:13942-14057:1:exon
so has part: feature:16645-16778:1:exon
so has part: feature:17126-19316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1801-1848:1:exon

position:1848:1
position: 1848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3891-4331:1:exon

position:3891:1
position: 3891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331:1
position: 4331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8265-8373:1:exon

position:8265:1
position: 8265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8373:1
position: 8373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9184-9338:1:exon

position:9184:1
position: 9184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9338:1
position: 9338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11494-11601:1:exon

position:11494:1
position: 11494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11601:1
position: 11601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13479-13536:1:exon

position:13479:1
position: 13479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13536:1
position: 13536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13942-14057:1:exon

position:13942:1
position: 13942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14057:1
position: 14057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16645-16778:1:exon

position:16645:1
position: 16645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16778:1
position: 16778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17126-19316:1:exon

position:17126:1
position: 17126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468187.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(4096..4331,8265..8373,9184..9338,13479..13536,13942..14057,16645..16778,17126..19316)
location: region:4096-19316:1
so has part: feature:4096-4331:1:exon
so has part: feature:8265-8373:1:exon
so has part: feature:9184-9338:1:exon
so has part: feature:13479-13536:1:exon
so has part: feature:13942-14057:1:exon
so has part: feature:16645-16778:1:exon
so has part: feature:17126-19316:1:exon

position:4096:1
position: 4096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4096-4331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8265-8373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9184-9338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13479-13536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13942-14057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16645-16778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17126-19316:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MENCLREPREVEKPESSENAEPAGKIEKYNVPLTKLKMMFEKGEAAQPKVPRDQRKTAVGRRISENSLSSEDFDAGQGEKSHSASGHLADTSPAPSPDKAESKKSLEMPRLSETSIKDRLAKYQAAVSKQGSSTVPMTETQASESELKNYKSEQKENMPPSLEDSSSCQEGEKVSGGENSLSFHSGLLEDGNVGQNLERETEVQKPVSTKQQNFGSKPVGQTDASPPKAVKKFQLPVKESCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKPHKELWAGKTECEESPEKTLHGVNATESPQSPGVEDAPIAKVGVLAASMEAKASALPEREEKPAETKKLRIAWPPPSDQSIQGSALDESIKVLKPKWPPEEEFSKPDVPEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPTKAEREVLKRNEDLVDKKPKEKQVENRNIQSAEEKNVEEEQELSPDKTAEHNFVENGQVNAETDEEEHGMEEQELPNEEFLEPNSPKHSSLAHVGTAKESSNQNRKSQDVGFWEGEDLEDLSVEEQIKRNRYYEEDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(4185..4331,8265..8373,9184..9338,11494..11601,13479..13536,13942..14057,16645..16778,17126..18110)
location: region:4185-18110:1
so has part: feature:4185-4331:1:exon
so has part: feature:8265-8373:1:exon
so has part: feature:9184-9338:1:exon
so has part: feature:11494-11601:1:exon
so has part: feature:13479-13536:1:exon
so has part: feature:13942-14057:1:exon
so has part: feature:16645-16778:1:exon
so has part: feature:17126-18110:1:exon

XP_030324048.1
type: Protein
SIO_000068: ncbiprotein

position:4185:1
position: 4185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18110:1
position: 18110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4185-4331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8265-8373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9184-9338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11494-11601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13479-13536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13942-14057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16645-16778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17126-18110:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MENCLREPREVEKPESSENAEPAGKIEKYNVPLTKLKMMFEKGEAAQPKVPRDQRKTAVGRRISENSLSSEDFDAGQGEKSHSASGHLADTSPAPSPDKAESKKSLEMPRLSETSIKDRLAKYQAAVSKQGSSTVPMVSGGENSLSFHSGLLEDGNVGQNLERETEVQKPVSTKQQNFGSKPVGQTDASPPKAVKKFQLPVKESCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKPHKELWAGKTECEESPEKTLHGVNATESPQSPGVEDAPIAKVGVLAASMEAKASALPEREEKPAETKKLRIAWPPPSDQSIQGSALDESIKVLKPKWPPEEEFSKPDVPEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPTKAEREVLKRNEDLVDKKPKEKQVENRNIQSAEEKNVEEEQELSPDKTAEHNFVENGQVNAETDEEEHGMEEQELPNEEFLEPNSPKHSSLAHVGTAKESSNQNRKSQDVGFWEGEDLEDLSVEEQIKRNRYYEEDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(4185..4331,8265..8373,9184..9338,13479..13536,13942..14057,16645..16778,17126..18110)
location: region:4185-18110:1
so has part: feature:4185-4331:1:exon
so has part: feature:8265-8373:1:exon
so has part: feature:9184-9338:1:exon
so has part: feature:13479-13536:1:exon
so has part: feature:13942-14057:1:exon
so has part: feature:16645-16778:1:exon
so has part: feature:17126-18110:1:exon

XP_030324047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4185-4331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8265-8373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9184-9338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13479-13536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13942-14057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16645-16778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17126-18110:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <22137..39406
location: region:22137-39406:1
so has part: feature:22137-39406:1:exon
subclass of: SO_0000010

103536442
type: Gene
SIO_000068: ncbigene

position:22137:1
position: 22137
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:39406:1
position: 39406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22137-39406:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CERS5
product: ceramide synthase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030468181.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(<22137..22345,27115..27220,29308..29438,30379..30436,30570..30620,31208..31300,32623..32751,33038..33144,34929..35085,39054..39406)
location: region:22137-39406:1
so has part: feature:22137-22345:1:exon
so has part: feature:27115-27220:1:exon
so has part: feature:29308-29438:1:exon
so has part: feature:30379-30436:1:exon
so has part: feature:30570-30620:1:exon
so has part: feature:31208-31300:1:exon
so has part: feature:32623-32751:1:exon
so has part: feature:33038-33144:1:exon
so has part: feature:34929-35085:1:exon
so has part: feature:39054-39406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22137-22345:1:exon

position:22345:1
position: 22345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27115-27220:1:exon

position:27115:1
position: 27115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27220:1
position: 27220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29308-29438:1:exon

position:29308:1
position: 29308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29438:1
position: 29438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30379-30436:1:exon

position:30379:1
position: 30379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30436:1
position: 30436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30570-30620:1:exon

position:30570:1
position: 30570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30620:1
position: 30620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31208-31300:1:exon

position:31208:1
position: 31208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31300:1
position: 31300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32623-32751:1:exon

position:32623:1
position: 32623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32751:1
position: 32751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33038-33144:1:exon

position:33038:1
position: 33038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33144:1
position: 33144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34929-35085:1:exon

position:34929:1
position: 34929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35085:1
position: 35085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:39054-39406:1:exon

position:39054:1
position: 39054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5
translation: RRKMAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGGGGLQYPRAGHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLAKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHIIWSYLIIRTAYKALVRGKVSKDDRSDVESSSEEEEVTPRTPKGTPRGTPSNGSSRANGHVASGQRAQED
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(<22137..22345,27115..27220,29308..29438,30379..30436,30570..30620,31208..31300,32623..32751,33038..33144,34929..35085,39054..39209)
location: region:22137-39209:1
so has part: feature:22137-22345:1:exon
so has part: feature:27115-27220:1:exon
so has part: feature:29308-29438:1:exon
so has part: feature:30379-30436:1:exon
so has part: feature:30570-30620:1:exon
so has part: feature:31208-31300:1:exon
so has part: feature:32623-32751:1:exon
so has part: feature:33038-33144:1:exon
so has part: feature:34929-35085:1:exon
so has part: feature:39054-39209:1:exon

XP_030324041.1
type: Protein
SIO_000068: ncbiprotein

position:39209:1
position: 39209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22137-22345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27115-27220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29308-29438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30379-30436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30570-30620:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31208-31300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32623-32751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33038-33144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34929-35085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39054-39209:1:exon

LOC115600004
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115600004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41286..41761)
location: region:41286-41761:-1
so has part: feature:41286-41761:-1:exon
subclass of: SO_0000010

115600004
type: Gene
SIO_000068: ncbigene

position:41286:-1
position: 41286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41761:-1
position: 41761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41286-41761:-1:exon

LOC115600004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115600004
product: cytochrome c oxidase assembly protein COX14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030468136.1
SIO_010081: LOC115600004
subclass of: SO_0000673
so part of: LOC115600004
location: complement(join(41286..41561,41648..41761))
location: region:41286-41761:-1
so has part: feature:41648-41761:-1:exon
so has part: feature:41286-41561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41648-41761:-1:exon

position:41648:-1
position: 41648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41286-41561:-1:exon

position:41561:-1
position: 41561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115600004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115600004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14
translation: MVSGKQLADFGYKAFSSSMMLLTLYGGYLCGVRAYRILQRRRERQAQAGTES
SIO_010081: LOC115600004
subclass of: SO_0000673
so part of: LOC115600004
location: complement(41395..41553)
location: region:41395-41553:-1
so has part: feature:41395-41553:-1:exon

XP_030323996.1
type: Protein
SIO_000068: ncbiprotein

position:41395:-1
position: 41395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41553:-1
position: 41553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41395-41553:-1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43445..49797)
location: region:43445-49797:-1
so has part: feature:43445-49797:-1:exon
subclass of: SO_0000010

103536440
type: Gene
SIO_000068: ncbigene

position:43445:-1
position: 43445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49797:-1
position: 49797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43445-49797:-1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468161.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(43445..45976,46494..46600,46741..46974,47191..47303,48028..48166,48493..48633,49359..49536,49693..49797))
location: region:43445-49797:-1
so has part: feature:49693-49797:-1:exon
so has part: feature:49359-49536:-1:exon
so has part: feature:48493-48633:-1:exon
so has part: feature:48028-48166:-1:exon
so has part: feature:47191-47303:-1:exon
so has part: feature:46741-46974:-1:exon
so has part: feature:46494-46600:-1:exon
so has part: feature:43445-45976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49693-49797:-1:exon

position:49693:-1
position: 49693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49359-49536:-1:exon

position:49359:-1
position: 49359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49536:-1
position: 49536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48493-48633:-1:exon

position:48493:-1
position: 48493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48633:-1
position: 48633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48028-48166:-1:exon

position:48028:-1
position: 48028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48166:-1
position: 48166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47191-47303:-1:exon

position:47191:-1
position: 47191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47303:-1
position: 47303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46741-46974:-1:exon

position:46741:-1
position: 46741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46974:-1
position: 46974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46494-46600:-1:exon

position:46494:-1
position: 46494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46600:-1
position: 46600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43445-45976:-1:exon

position:45976:-1
position: 45976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
translation: MGGRRVCIVGSGNWGSAIAKIAGGNAGRLSGFEKEVRMWVLQEEVGGRQLTDIINTEHENVKYLPGRKLPPNVVAEPDLLKACAGADILLFVVPHQFIGKVCDQLKGHVKKDAVGMSLIKGVDEGPDGLRLISDIIREKLGIEMSVLMGANIANEVADEKFCETTIGCRNPQHGQVLKELMQTPNFRVTVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKGPVTPSTFLQSCGVADLITTCYGGRNRKVAEAFAKTGKSIDQLEKEMLNGQKLQGPQTSAEVHRILKSKNMVEKFPLFTAVYRICYEGKPVTDVIRCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(45880..45976,46494..46600,46741..46974,47191..47303,48028..48166,48493..48633,49359..49536,49693..49733))
location: region:45880-49733:-1
so has part: feature:49693-49733:-1:exon
so has part: feature:49359-49536:-1:exon
so has part: feature:48493-48633:-1:exon
so has part: feature:48028-48166:-1:exon
so has part: feature:47191-47303:-1:exon
so has part: feature:46741-46974:-1:exon
so has part: feature:46494-46600:-1:exon
so has part: feature:45880-45976:-1:exon

XP_030324021.1
type: Protein
SIO_000068: ncbiprotein

position:45880:-1
position: 45880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49733:-1
position: 49733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49693-49733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49359-49536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48493-48633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48028-48166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47191-47303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46741-46974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46494-46600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45880-45976:-1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51589..58781)
location: region:51589-58781:-1
so has part: feature:51589-58781:-1:exon
subclass of: SO_0000010

103536441
type: Gene
SIO_000068: ncbigene

position:51589:-1
position: 51589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58781:-1
position: 58781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51589-58781:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468160.1
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(51589..52382,52665..52766,53043..53165,53490..53625,54181..54278,54391..54552,54655..54756,55086..55202,55674..55796,56035..56157,56573..56615,57860..58047,58596..58781))
location: region:51589-58781:-1
so has part: feature:58596-58781:-1:exon
so has part: feature:57860-58047:-1:exon
so has part: feature:56573-56615:-1:exon
so has part: feature:56035-56157:-1:exon
so has part: feature:55674-55796:-1:exon
so has part: feature:55086-55202:-1:exon
so has part: feature:54655-54756:-1:exon
so has part: feature:54391-54552:-1:exon
so has part: feature:54181-54278:-1:exon
so has part: feature:53490-53625:-1:exon
so has part: feature:53043-53165:-1:exon
so has part: feature:52665-52766:-1:exon
so has part: feature:51589-52382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58596-58781:-1:exon

position:58596:-1
position: 58596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57860-58047:-1:exon

position:57860:-1
position: 57860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58047:-1
position: 58047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56573-56615:-1:exon

position:56573:-1
position: 56573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56615:-1
position: 56615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56035-56157:-1:exon

position:56035:-1
position: 56035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56157:-1
position: 56157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55674-55796:-1:exon

position:55674:-1
position: 55674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55796:-1
position: 55796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:55086-55202:-1:exon

position:55086:-1
position: 55086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55202:-1
position: 55202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:54655-54756:-1:exon

position:54655:-1
position: 54655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54756:-1
position: 54756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54391-54552:-1:exon

position:54391:-1
position: 54391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54552:-1
position: 54552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54181-54278:-1:exon

position:54181:-1
position: 54181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54278:-1
position: 54278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53490-53625:-1:exon

position:53490:-1
position: 53490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53625:-1
position: 53625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:53043-53165:-1:exon

position:53043:-1
position: 53043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53165:-1
position: 53165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:52665-52766:-1:exon

position:52665:-1
position: 52665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52766:-1
position: 52766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:51589-52382:-1:exon

position:52382:-1
position: 52382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468159.1
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(51589..52382,52665..52766,53043..53195,53490..53625,54181..54278,54391..54552,54655..54756,55086..55202,55674..55796,56035..56157,56573..56615,57860..58047,58596..58781))
location: region:51589-58781:-1
so has part: feature:58596-58781:-1:exon
so has part: feature:57860-58047:-1:exon
so has part: feature:56573-56615:-1:exon
so has part: feature:56035-56157:-1:exon
so has part: feature:55674-55796:-1:exon
so has part: feature:55086-55202:-1:exon
so has part: feature:54655-54756:-1:exon
so has part: feature:54391-54552:-1:exon
so has part: feature:54181-54278:-1:exon
so has part: feature:53490-53625:-1:exon
so has part: feature:53043-53195:-1:exon
so has part: feature:52665-52766:-1:exon
so has part: feature:51589-52382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58596-58781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57860-58047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56573-56615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56035-56157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55674-55796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55086-55202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54655-54756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54391-54552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54181-54278:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53490-53625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53043-53195:-1:exon

position:53195:-1
position: 53195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:52665-52766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:51589-52382:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
translation: MAARAGFQSVTPNAAGAGAAAGTAGLGPGTPSGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGLAQASLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(52329..52382,52665..52766,53043..53165,53490..53625,54181..54278,54391..54552,54655..54756,55086..55202,55674..55796,56035..56157,56573..56615,57860..58047,58596..58763))
location: region:52329-58763:-1
so has part: feature:58596-58763:-1:exon
so has part: feature:57860-58047:-1:exon
so has part: feature:56573-56615:-1:exon
so has part: feature:56035-56157:-1:exon
so has part: feature:55674-55796:-1:exon
so has part: feature:55086-55202:-1:exon
so has part: feature:54655-54756:-1:exon
so has part: feature:54391-54552:-1:exon
so has part: feature:54181-54278:-1:exon
so has part: feature:53490-53625:-1:exon
so has part: feature:53043-53165:-1:exon
so has part: feature:52665-52766:-1:exon
so has part: feature:52329-52382:-1:exon

XP_030324020.1
type: Protein
SIO_000068: ncbiprotein

position:52329:-1
position: 52329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58763:-1
position: 58763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58596-58763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57860-58047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56573-56615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56035-56157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55674-55796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55086-55202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54655-54756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54391-54552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54181-54278:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53490-53625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53043-53165:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52665-52766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52329-52382:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
translation: MAARAGFQSVTPNAAGAGAAAGTAGLGPGTPSGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGLAQASLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKQLSCRAYLLQIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(52329..52382,52665..52766,53043..53195,53490..53625,54181..54278,54391..54552,54655..54756,55086..55202,55674..55796,56035..56157,56573..56615,57860..58047,58596..58763))
location: region:52329-58763:-1
so has part: feature:58596-58763:-1:exon
so has part: feature:57860-58047:-1:exon
so has part: feature:56573-56615:-1:exon
so has part: feature:56035-56157:-1:exon
so has part: feature:55674-55796:-1:exon
so has part: feature:55086-55202:-1:exon
so has part: feature:54655-54756:-1:exon
so has part: feature:54391-54552:-1:exon
so has part: feature:54181-54278:-1:exon
so has part: feature:53490-53625:-1:exon
so has part: feature:53043-53195:-1:exon
so has part: feature:52665-52766:-1:exon
so has part: feature:52329-52382:-1:exon

XP_030324019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58596-58763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57860-58047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56573-56615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56035-56157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55674-55796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55086-55202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54655-54756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54391-54552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54181-54278:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53490-53625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53043-53195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52665-52766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52329-52382:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66535..84495)
location: region:66535-84495:-1
so has part: feature:66535-84495:-1:exon
subclass of: SO_0000010

103536439
type: Gene
SIO_000068: ncbigene

position:66535:-1
position: 66535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84495:-1
position: 84495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66535-84495:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ASIC1
product: acid sensing ion channel subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468158.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(66535..66639,67807..67911,68019..68098,68316..68407,68493..68646,68729..68785,69068..69218,69383..69510,69930..70080,82430..82625,83602..83996,84448..84495))
location: region:66535-84495:-1
so has part: feature:84448-84495:-1:exon
so has part: feature:83602-83996:-1:exon
so has part: feature:82430-82625:-1:exon
so has part: feature:69930-70080:-1:exon
so has part: feature:69383-69510:-1:exon
so has part: feature:69068-69218:-1:exon
so has part: feature:68729-68785:-1:exon
so has part: feature:68493-68646:-1:exon
so has part: feature:68316-68407:-1:exon
so has part: feature:68019-68098:-1:exon
so has part: feature:67807-67911:-1:exon
so has part: feature:66535-66639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84448-84495:-1:exon

position:84448:-1
position: 84448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83602-83996:-1:exon

position:83602:-1
position: 83602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83996:-1
position: 83996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82430-82625:-1:exon

position:82430:-1
position: 82430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82625:-1
position: 82625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69930-70080:-1:exon

position:69930:-1
position: 69930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70080:-1
position: 70080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69383-69510:-1:exon

position:69383:-1
position: 69383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69510:-1
position: 69510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69068-69218:-1:exon

position:69068:-1
position: 69068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69218:-1
position: 69218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68729-68785:-1:exon

position:68729:-1
position: 68729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68785:-1
position: 68785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:68493-68646:-1:exon

position:68493:-1
position: 68493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68646:-1
position: 68646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:68316-68407:-1:exon

position:68316:-1
position: 68316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68407:-1
position: 68407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:68019-68098:-1:exon

position:68019:-1
position: 68019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68098:-1
position: 68098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:67807-67911:-1:exon

position:67807:-1
position: 67807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67911:-1
position: 67911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:66535-66639:-1:exon

position:66639:-1
position: 66639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVFWALCFLGSLALLVLVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNSGQDGKPRLMTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAGVGDSEFFDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRGGKCHKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(66535..66639,67807..67911,68019..68098,68316..68407,68493..68646,68729..68785,69068..69218,69383..69510,69930..70080,82430..82625,83602..83966))
location: region:66535-83966:-1
so has part: feature:83602-83966:-1:exon
so has part: feature:82430-82625:-1:exon
so has part: feature:69930-70080:-1:exon
so has part: feature:69383-69510:-1:exon
so has part: feature:69068-69218:-1:exon
so has part: feature:68729-68785:-1:exon
so has part: feature:68493-68646:-1:exon
so has part: feature:68316-68407:-1:exon
so has part: feature:68019-68098:-1:exon
so has part: feature:67807-67911:-1:exon
so has part: feature:66535-66639:-1:exon

XP_030324018.1
type: Protein
SIO_000068: ncbiprotein

position:83966:-1
position: 83966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83602-83966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82430-82625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69930-70080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69383-69510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69068-69218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68729-68785:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68493-68646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68316-68407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68019-68098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67807-67911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:66535-66639:-1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99469..108284
location: region:99469-108284:1
so has part: feature:99469-108284:1:exon
subclass of: SO_0000010

103536438
type: Gene
SIO_000068: ncbigene

position:99469:1
position: 99469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108284:1
position: 108284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99469-108284:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468156.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(99469..99494,100665..100753,101205..101407,101709..101845,102055..102124,102337..102390,103049..103126,103257..103374,103776..103906,104099..104263,104612..104707,104939..105140,106681..106786,106980..107112,107256..107391,107652..107760,108036..108284)
location: region:99469-108284:1
so has part: feature:99469-99494:1:exon
so has part: feature:100665-100753:1:exon
so has part: feature:101205-101407:1:exon
so has part: feature:101709-101845:1:exon
so has part: feature:102055-102124:1:exon
so has part: feature:102337-102390:1:exon
so has part: feature:103049-103126:1:exon
so has part: feature:103257-103374:1:exon
so has part: feature:103776-103906:1:exon
so has part: feature:104099-104263:1:exon
so has part: feature:104612-104707:1:exon
so has part: feature:104939-105140:1:exon
so has part: feature:106681-106786:1:exon
so has part: feature:106980-107112:1:exon
so has part: feature:107256-107391:1:exon
so has part: feature:107652-107760:1:exon
so has part: feature:108036-108284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99469-99494:1:exon

position:99494:1
position: 99494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100665-100753:1:exon

position:100665:1
position: 100665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100753:1
position: 100753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101205-101407:1:exon

position:101205:1
position: 101205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101407:1
position: 101407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101709-101845:1:exon

position:101709:1
position: 101709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101845:1
position: 101845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102055-102124:1:exon

position:102055:1
position: 102055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102124:1
position: 102124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102337-102390:1:exon

position:102337:1
position: 102337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102390:1
position: 102390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103049-103126:1:exon

position:103049:1
position: 103049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103126:1
position: 103126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103257-103374:1:exon

position:103257:1
position: 103257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103374:1
position: 103374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103776-103906:1:exon

position:103776:1
position: 103776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103906:1
position: 103906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104099-104263:1:exon

position:104099:1
position: 104099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104263:1
position: 104263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:104612-104707:1:exon

position:104612:1
position: 104612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104707:1
position: 104707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:104939-105140:1:exon

position:104939:1
position: 104939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105140:1
position: 105140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106681-106786:1:exon

position:106681:1
position: 106681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106786:1
position: 106786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106980-107112:1:exon

position:106980:1
position: 106980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107112:1
position: 107112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:107256-107391:1:exon

position:107256:1
position: 107256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107391:1
position: 107391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:107652-107760:1:exon

position:107652:1
position: 107652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107760:1
position: 107760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:108036-108284:1:exon

position:108036:1
position: 108036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468157.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(99469..99494,100665..100753,101205..101407,101709..101845,102055..102124,102337..102390,103049..103126,103257..103374,103776..103906,104099..104263,104612..104707,104942..105140,106681..106786,106980..107112,107256..107391,107652..107760,108036..108284)
location: region:99469-108284:1
so has part: feature:99469-99494:1:exon
so has part: feature:100665-100753:1:exon
so has part: feature:101205-101407:1:exon
so has part: feature:101709-101845:1:exon
so has part: feature:102055-102124:1:exon
so has part: feature:102337-102390:1:exon
so has part: feature:103049-103126:1:exon
so has part: feature:103257-103374:1:exon
so has part: feature:103776-103906:1:exon
so has part: feature:104099-104263:1:exon
so has part: feature:104612-104707:1:exon
so has part: feature:104942-105140:1:exon
so has part: feature:106681-106786:1:exon
so has part: feature:106980-107112:1:exon
so has part: feature:107256-107391:1:exon
so has part: feature:107652-107760:1:exon
so has part: feature:108036-108284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99469-99494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100665-100753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101205-101407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101709-101845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102055-102124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102337-102390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103049-103126:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103257-103374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103776-103906:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104099-104263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104612-104707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:104942-105140:1:exon

position:104942:1
position: 104942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106681-106786:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106980-107112:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107256-107391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:107652-107760:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108036-108284:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X1
translation: MESSMLNLRGLYDQLVRQAEVLSEGNEAQFIQLARNFEEYRMRLQKAEHELGRYKDLLMKTETECSALEVKLKHARNQVDVEIKRRQKAETDCEKLERQIQLIRELLMCDASGSIQLSKEQKSALAFLNRPQVSLGGSGNKRLSTIDESGSILSDISFDKTDESLDWDSSVVKAVRLKRREKRRSSRQFTEGPPAPQKKSRSISSTVDQGNESIVAKTTLTVPNDGGPIEAISTIQTVPCALRSWRRSGPLQPWSSDSNSVSKQQEFKSESDGSATPQSNGGVRLHEFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVTHPECRDRCPLPCIPSLGGTPVRIGEGTLMDFVPSTSPMIPSLVVHCVNEIEQRGLHEQTGLYRISGCDKTVRELKEKYLRSKNIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYRAVDELPQANRDTLAFLMVHLQRVAQSPETKMDIPNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLMLPLDYWSQVMMVEQENVDPAHVIENCNAFSTPQTPDTKVSILGPLTTPEQQLSKTPSSSSLSQRVRSTFSRTTPKFGSKTKSTTQLGHSGTFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(100669..100753,101205..101407,101709..101845,102055..102124,102337..102390,103049..103126,103257..103374,103776..103906,104099..104263,104612..104707,104939..105140,106681..106786,106980..107112,107256..107391,107652..107760,108036..108111)
location: region:100669-108111:1
so has part: feature:100669-100753:1:exon
so has part: feature:101205-101407:1:exon
so has part: feature:101709-101845:1:exon
so has part: feature:102055-102124:1:exon
so has part: feature:102337-102390:1:exon
so has part: feature:103049-103126:1:exon
so has part: feature:103257-103374:1:exon
so has part: feature:103776-103906:1:exon
so has part: feature:104099-104263:1:exon
so has part: feature:104612-104707:1:exon
so has part: feature:104939-105140:1:exon
so has part: feature:106681-106786:1:exon
so has part: feature:106980-107112:1:exon
so has part: feature:107256-107391:1:exon
so has part: feature:107652-107760:1:exon
so has part: feature:108036-108111:1:exon

XP_030324016.1
type: Protein
SIO_000068: ncbiprotein

position:100669:1
position: 100669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108111:1
position: 108111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100669-100753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101205-101407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101709-101845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102055-102124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102337-102390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103049-103126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103257-103374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103776-103906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104099-104263:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104612-104707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104939-105140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106681-106786:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106980-107112:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107256-107391:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107652-107760:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108036-108111:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X2
translation: MESSMLNLRGLYDQLVRQAEVLSEGNEAQFIQLARNFEEYRMRLQKAEHELGRYKDLLMKTETECSALEVKLKHARNQVDVEIKRRQKAETDCEKLERQIQLIRELLMCDASGSIQLSKEQKSALAFLNRPQVSLGGSGNKRLSTIDESGSILSDISFDKTDESLDWDSSVVKAVRLKRREKRRSSRQFTEGPPAPQKKSRSISSTVDQGNESIVAKTTLTVPNDGGPIEAISTIQTVPCALRSWRRSGPLQPWSSDSNSVSKQQEFKSESDGSATPQSNGGVRLHEFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVTHPECRDRCPLPCIPSLGGTPVRIGEGTLMDFVPSTSPMIPSLVVHCVNEIEQRGLHETGLYRISGCDKTVRELKEKYLRSKNIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYRAVDELPQANRDTLAFLMVHLQRVAQSPETKMDIPNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLMLPLDYWSQVMMVEQENVDPAHVIENCNAFSTPQTPDTKVSILGPLTTPEQQLSKTPSSSSLSQRVRSTFSRTTPKFGSKTKSTTQLGHSGTFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(100669..100753,101205..101407,101709..101845,102055..102124,102337..102390,103049..103126,103257..103374,103776..103906,104099..104263,104612..104707,104942..105140,106681..106786,106980..107112,107256..107391,107652..107760,108036..108111)
location: region:100669-108111:1
so has part: feature:100669-100753:1:exon
so has part: feature:101205-101407:1:exon
so has part: feature:101709-101845:1:exon
so has part: feature:102055-102124:1:exon
so has part: feature:102337-102390:1:exon
so has part: feature:103049-103126:1:exon
so has part: feature:103257-103374:1:exon
so has part: feature:103776-103906:1:exon
so has part: feature:104099-104263:1:exon
so has part: feature:104612-104707:1:exon
so has part: feature:104942-105140:1:exon
so has part: feature:106681-106786:1:exon
so has part: feature:106980-107112:1:exon
so has part: feature:107256-107391:1:exon
so has part: feature:107652-107760:1:exon
so has part: feature:108036-108111:1:exon

XP_030324017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100669-100753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101205-101407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101709-101845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102055-102124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102337-102390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103049-103126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103257-103374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103776-103906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104099-104263:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104612-104707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104942-105140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106681-106786:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106980-107112:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107256-107391:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107652-107760:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108036-108111:1:exon

HOXC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(407002..408755)
location: region:407002-408755:-1
so has part: feature:407002-408755:-1:exon
subclass of: SO_0000010

103536699
type: Gene
SIO_000068: ncbigene

position:407002:-1
position: 407002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408755:-1
position: 408755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407002-408755:-1:exon

HOXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC5
product: homeobox C5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_008502894.1
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(407002..407216,408299..408755))
location: region:407002-408755:-1
so has part: feature:408299-408755:-1:exon
so has part: feature:407002-407216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408299-408755:-1:exon

position:408299:-1
position: 408299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407002-407216:-1:exon

position:407216:-1
position: 407216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C5
translation: MSSYVANSFYKQSPPVPACAMQSYGNYGSVPEVQSPRYRSRGLDLSIPLPSSGASTSLSGLEMSTAPPANPERPSCTVMGSSGHPLGREEQTARNPGIYRQKSGNAPLEERSKSSAEIKAEPVQTTQPGGPQLQQQQPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKSKEAL
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(407002..407216,408299..408755))
location: region:407002-408755:-1
so has part: feature:408299-408755:-1:exon
so has part: feature:407002-407216:-1:exon

XP_008501116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408299-408755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407002-407216:-1:exon

HOXC6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412868..427335)
location: region:412868-427335:-1
so has part: feature:412868-427335:-1:exon
subclass of: SO_0000010

103536708
type: Gene
SIO_000068: ncbigene

position:412868:-1
position: 412868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427335:-1
position: 427335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412868-427335:-1:exon

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC6
product: homeobox C6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030468138.1
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(412868..413181,414391..414615,427324..427335))
location: region:412868-427335:-1
so has part: feature:427324-427335:-1:exon
so has part: feature:414391-414615:-1:exon
so has part: feature:412868-413181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427324-427335:-1:exon

position:427324:-1
position: 427324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414391-414615:-1:exon

position:414391:-1
position: 414391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414615:-1
position: 414615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412868-413181:-1:exon

position:413181:-1
position: 413181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC6
product: homeobox C6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008502904.2
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(412868..413181,414391..414790))
location: region:412868-414790:-1
so has part: feature:414391-414790:-1:exon
so has part: feature:412868-413181:-1:exon

position:414790:-1
position: 414790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414391-414790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412868-413181:-1:exon

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6 isoform X1
translation: MNSYFTNPSLSCHLTSGQEVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSSPFYSPQDNVVFSSSRGPYDYGSNAFYQEKDMLSSCRQNSMGHNTQTSIAQDFTSDQNRNTSQEQKTSIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLSSTLSGAGGGTAAAAADSLAKEEKREETEEEKQKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(412868..413181,414391..414790))
location: region:412868-414790:-1
so has part: feature:414391-414790:-1:exon
so has part: feature:412868-413181:-1:exon

XP_008501126.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414391-414790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412868-413181:-1:exon

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6 isoform X2
translation: MLSSCRQNSMGHNTQTSIAQDFTSDQNRNTSQEQKTSIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLSSTLSGAGGGTAAAAADSLAKEEKREETEEEKQKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(412868..413181,414391..414544))
location: region:412868-414544:-1
so has part: feature:414391-414544:-1:exon
so has part: feature:412868-413181:-1:exon

XP_030323998.1
type: Protein
SIO_000068: ncbiprotein

position:414544:-1
position: 414544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414391-414544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412868-413181:-1:exon

HOXC8
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(434436..437822)
location: region:434436-437822:-1
so has part: feature:434436-437822:-1:exon
subclass of: SO_0000010

103536700
type: Gene
SIO_000068: ncbigene

position:434436:-1
position: 434436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437822:-1
position: 437822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434436-437822:-1:exon

HOXC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC8
product: homeobox C8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008502895.1
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: complement(join(434436..434728,437387..437822))
location: region:434436-437822:-1
so has part: feature:437387-437822:-1:exon
so has part: feature:434436-434728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437387-437822:-1:exon

position:437387:-1
position: 437387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434436-434728:-1:exon

position:434728:-1
position: 434728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C8
translation: MSSYFVNPLFSKYKGGESLEPTYYDCRFPQSVSRSHALVYGPGTTAPTFQHPSHHVQEFFHHGTSSISNSGYQQNPCALACHGDASKFYGYEALPRQSLYGAQQETTVVQYPDCKSSSNSNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKTEEEGNEEEEKEEEEKEESKD
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: complement(join(434436..434728,437387..437822))
location: region:434436-437822:-1
so has part: feature:437387-437822:-1:exon
so has part: feature:434436-434728:-1:exon

XP_008501117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437387-437822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434436-434728:-1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(445765..448920)
location: region:445765-448920:-1
so has part: feature:445765-448920:-1:exon
subclass of: SO_0000010

103536701
type: Gene
SIO_000068: ncbigene

position:445765:-1
position: 445765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448920:-1
position: 448920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445765-448920:-1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC9
product: homeobox C9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 16 Proteins
transcript id: XM_008502896.1
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(445765..446046,448359..448920))
location: region:445765-448920:-1
so has part: feature:448359-448920:-1:exon
so has part: feature:445765-446046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448359-448920:-1:exon

position:448359:-1
position: 448359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445765-446046:-1:exon

position:446046:-1
position: 446046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C9
translation: MNVKEGGTMSASGPISNYYVDSLISHENEELLASRFPSSASHPAAARPSGLVPDCADFPSCSFAPKPAVFTTSWAPVHSQSSVGYHPYAPQAPVGAEPRYMRTWLEPLAGAVSFPAFAPGARPYGLKPDAFPGRRAECGPADGRGYADYMYAAPGELRDRAAQTIPSPESEAIASSKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKTDKEQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(445802..446046,448359..448920))
location: region:445802-448920:-1
so has part: feature:448359-448920:-1:exon
so has part: feature:445802-446046:-1:exon

XP_008501118.1
type: Protein
SIO_000068: ncbiprotein

position:445802:-1
position: 445802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448359-448920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445802-446046:-1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(460930..465037)
location: region:460930-465037:-1
so has part: feature:460930-465037:-1:exon
subclass of: SO_0000010

103536703
type: Gene
SIO_000068: ncbigene

position:460930:-1
position: 460930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465037:-1
position: 465037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460930-465037:-1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC10
product: homeobox C10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins
transcript id: XM_008502897.2
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(460930..461207,464221..465037))
location: region:460930-465037:-1
so has part: feature:464221-465037:-1:exon
so has part: feature:460930-461207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464221-465037:-1:exon

position:464221:-1
position: 464221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460930-461207:-1:exon

position:461207:-1
position: 461207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10
translation: MSCPNNVTSNSFLMDSLAGTCRGENYSSSQGMYMQPGSDFSCGVMRNCGIIPSLSKRDEVNSSTLSLSTYPSYLSQLDTWCDPKNAYRIEQPVARQLPSCSFPTNVKEENVCCMYNAEKRAKNAPEAALYPNQMPESCLNDHEVPVPSYYRASQGYPSMEKTSNCSNPNEFEASFESRASLNPRNEHLEPAPPPPPPPPPPPVAKVSFPENTKPDNPQNTSSSEIKTEKSLPAPKTSPSEAEKELNKNTDTSTDNSDNEAKEDIKAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFNFT
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(460930..461207,464221..465004))
location: region:460930-465004:-1
so has part: feature:464221-465004:-1:exon
so has part: feature:460930-461207:-1:exon

XP_008501119.1
type: Protein
SIO_000068: ncbiprotein

position:465004:-1
position: 465004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464221-465004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460930-461207:-1:exon

HOXC11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478058..480379)
location: region:478058-480379:-1
so has part: feature:478058-480379:-1:exon
subclass of: SO_0000010

103536704
type: Gene
SIO_000068: ncbigene

position:478058:-1
position: 478058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480379:-1
position: 480379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478058-480379:-1:exon

HOXC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC11
product: homeobox C11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_008502898.1
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(478058..478290,479701..480379))
location: region:478058-480379:-1
so has part: feature:479701-480379:-1:exon
so has part: feature:478058-478290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479701-480379:-1:exon

position:479701:-1
position: 479701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478058-478290:-1:exon

position:478290:-1
position: 478290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C11
translation: MFNSVNLGNFCSQSRKERSAEFGERAGCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQISYPYSTNLSQVQPVREVSYGLDPSSKWHHRSNYASCYSAEDLMHRECIPPSTMTEMLMKNESVYSHHHHPSSNHPASTGFYTSMNKNTVLPQGFDRFFENAYCGAENPTESCLQKGEGKVEAESQPHALSSRGEQGIDPEDEEENTNPGSSASSSSVTKEGSKSSNSSAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(478058..478290,479701..480379))
location: region:478058-480379:-1
so has part: feature:479701-480379:-1:exon
so has part: feature:478058-478290:-1:exon

XP_008501120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479701-480379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478058-478290:-1:exon

HOXC12
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(498017..499721)
location: region:498017-499721:-1
so has part: feature:498017-499721:-1:exon
subclass of: SO_0000010

103536705
type: Gene
SIO_000068: ncbigene

position:498017:-1
position: 498017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499721:-1
position: 499721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498017-499721:-1:exon

HOXC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC12
product: homeobox C12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_008502899.1
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(498017..498255,499157..499721))
location: region:498017-499721:-1
so has part: feature:499157-499721:-1:exon
so has part: feature:498017-498255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499157-499721:-1:exon

position:499157:-1
position: 499157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498017-498255:-1:exon

position:498255:-1
position: 498255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C12
translation: MGEHNLLNPGFVGPLVNIHTGDTFYFPNFRASGGQLPGLPSLSYPRRENVCSLPWASSEPCNGYPQPYLSSPVSINPSFGRACELARVEESKCYYRETCTEPSGLKREERGRDSALLPLESSLPNGMGGNFSKYDYPSSEAVPHDPPSCQSLESDSSSSLLNEGNKGTSGEAGGLVSPLNQGSTLGNGGAPWYPMHTRSRKKRKPYSKLQLAELEGEFMVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(498017..498255,499157..499721))
location: region:498017-499721:-1
so has part: feature:499157-499721:-1:exon
so has part: feature:498017-498255:-1:exon

XP_008501121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499157-499721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498017-498255:-1:exon

HOXC13
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510274..513282)
location: region:510274-513282:-1
so has part: feature:510274-513282:-1:exon
subclass of: SO_0000010

103536709
type: Gene
SIO_000068: ncbigene

position:510274:-1
position: 510274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513282:-1
position: 513282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510274-513282:-1:exon

HOXC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HOXC13
product: homeobox C13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
transcript id: XM_030468151.1
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(510274..510530,512652..513282))
location: region:510274-513282:-1
so has part: feature:512652-513282:-1:exon
so has part: feature:510274-510530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512652-513282:-1:exon

position:512652:-1
position: 512652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510274-510530:-1:exon

position:510530:-1
position: 510530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C13
translation: MTAPLGLPPRWPDGLGCRCEDPPREKNRMEGLGHCREMMSHAGLAVPTAPPPPPPQGTAYAELAAAEPPRQCPSGAASSAALGYGYPFGGGYYGCRLSHSHGVNLQQKPCAYHPGEKYPEAGGPLPGEELPSRAKEFAFYPGFPSSYQAVPGYLDVSVVPGLGGHPEPRHEALLPMEGYQHWALSNGWDGQMYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKVVSKSKTAHLHPT
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(510274..510530,512652..513282))
location: region:510274-513282:-1
so has part: feature:512652-513282:-1:exon
so has part: feature:510274-510530:-1:exon

XP_030324011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512652-513282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510274-510530:-1:exon

LOC103536706
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103536706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565342..607861
location: region:565342-607861:1
so has part: feature:565342-607861:1:exon
subclass of: SO_0000010

103536706
type: Gene
SIO_000068: ncbigene

position:565342:1
position: 565342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607861:1
position: 607861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565342-607861:1:exon

LOC103536706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536706
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030468091.1
SIO_010081: LOC103536706
subclass of: SO_0000673
so part of: LOC103536706
location: join(565342..565418,589857..589953,592814..592932,595409..595543,596242..596399,598199..598298,599737..599853,600473..600619,602785..602982,603673..603781,604340..607861)
location: region:565342-607861:1
so has part: feature:565342-565418:1:exon
so has part: feature:589857-589953:1:exon
so has part: feature:592814-592932:1:exon
so has part: feature:595409-595543:1:exon
so has part: feature:596242-596399:1:exon
so has part: feature:598199-598298:1:exon
so has part: feature:599737-599853:1:exon
so has part: feature:600473-600619:1:exon
so has part: feature:602785-602982:1:exon
so has part: feature:603673-603781:1:exon
so has part: feature:604340-607861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565342-565418:1:exon

position:565418:1
position: 565418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589857-589953:1:exon

position:589857:1
position: 589857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589953:1
position: 589953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592814-592932:1:exon

position:592814:1
position: 592814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592932:1
position: 592932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595409-595543:1:exon

position:595409:1
position: 595409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595543:1
position: 595543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596242-596399:1:exon

position:596242:1
position: 596242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596399:1
position: 596399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598199-598298:1:exon

position:598199:1
position: 598199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598298:1
position: 598298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:599737-599853:1:exon

position:599737:1
position: 599737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599853:1
position: 599853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600473-600619:1:exon

position:600473:1
position: 600473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600619:1
position: 600619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:602785-602982:1:exon

position:602785:1
position: 602785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602982:1
position: 602982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:603673-603781:1:exon

position:603673:1
position: 603673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603781:1
position: 603781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:604340-607861:1:exon

position:604340:1
position: 604340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103536706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536706
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030468092.1
SIO_010081: LOC103536706
subclass of: SO_0000673
so part of: LOC103536706
location: join(565342..565418,589857..589953,592814..592932,595409..595543,596242..596399,598199..598298,599737..599853,600473..600619,602785..602982,603673..603781,604343..607861)
location: region:565342-607861:1
so has part: feature:565342-565418:1:exon
so has part: feature:589857-589953:1:exon
so has part: feature:592814-592932:1:exon
so has part: feature:595409-595543:1:exon
so has part: feature:596242-596399:1:exon
so has part: feature:598199-598298:1:exon
so has part: feature:599737-599853:1:exon
so has part: feature:600473-600619:1:exon
so has part: feature:602785-602982:1:exon
so has part: feature:603673-603781:1:exon
so has part: feature:604343-607861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565342-565418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589857-589953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592814-592932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595409-595543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596242-596399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598199-598298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599737-599853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600473-600619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602785-602982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603673-603781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604343-607861:1:exon

position:604343:1
position: 604343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103536706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPRSPQNKEKELTSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTSSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINTSGSISPSGGLPVHSEAKMRLKATLTAASSLNGSNLVVGSASTMVTSRPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRVVEEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSLPTTTTTTSSPNGLSVRSAAEAVATSVLTQMATQRTDLSLPVPSHVIMAPQSQSAGR
SIO_010081: LOC103536706
subclass of: SO_0000673
so part of: LOC103536706
location: join(565371..565418,589857..589953,592814..592932,595409..595543,596242..596399,598199..598298,599737..599853,600473..600619,602785..602982,603673..603781,604340..604578)
location: region:565371-604578:1
so has part: feature:565371-565418:1:exon
so has part: feature:589857-589953:1:exon
so has part: feature:592814-592932:1:exon
so has part: feature:595409-595543:1:exon
so has part: feature:596242-596399:1:exon
so has part: feature:598199-598298:1:exon
so has part: feature:599737-599853:1:exon
so has part: feature:600473-600619:1:exon
so has part: feature:602785-602982:1:exon
so has part: feature:603673-603781:1:exon
so has part: feature:604340-604578:1:exon

XP_030323951.1
type: Protein
SIO_000068: ncbiprotein

position:565371:1
position: 565371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604578:1
position: 604578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565371-565418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589857-589953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592814-592932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595409-595543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596242-596399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598199-598298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599737-599853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600473-600619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602785-602982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603673-603781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604340-604578:1:exon

LOC103536706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X2
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPRSPQNKEKELTSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTSSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINTSGSISPSGGLPVHSEAKMRLKATLTAASSLNGSNLVVGSASTMVTSRPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRVVEEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSLPTTTTTTSSPNGLSVRSAAEAVATSVLTQMATQRTDLSLPVPSHVIMAPQSQSAGR
SIO_010081: LOC103536706
subclass of: SO_0000673
so part of: LOC103536706
location: join(565371..565418,589857..589953,592814..592932,595409..595543,596242..596399,598199..598298,599737..599853,600473..600619,602785..602982,603673..603781,604343..604578)
location: region:565371-604578:1
so has part: feature:565371-565418:1:exon
so has part: feature:589857-589953:1:exon
so has part: feature:592814-592932:1:exon
so has part: feature:595409-595543:1:exon
so has part: feature:596242-596399:1:exon
so has part: feature:598199-598298:1:exon
so has part: feature:599737-599853:1:exon
so has part: feature:600473-600619:1:exon
so has part: feature:602785-602982:1:exon
so has part: feature:603673-603781:1:exon
so has part: feature:604343-604578:1:exon

XP_030323952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565371-565418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589857-589953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592814-592932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595409-595543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596242-596399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598199-598298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599737-599853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600473-600619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602785-602982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603673-603781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604343-604578:1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(611459..617605)
location: region:611459-617605:-1
so has part: feature:611459-617605:-1:exon
subclass of: SO_0000010

103536710
type: Gene
SIO_000068: ncbigene

position:611459:-1
position: 611459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617605:-1
position: 617605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611459-617605:-1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030468093.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(611459..611636,612465..612657,613287..613414,613525..613642,615052..615124,615295..615378,616249..616354,616874..617055,617553..617605))
location: region:611459-617605:-1
so has part: feature:617553-617605:-1:exon
so has part: feature:616874-617055:-1:exon
so has part: feature:616249-616354:-1:exon
so has part: feature:615295-615378:-1:exon
so has part: feature:615052-615124:-1:exon
so has part: feature:613525-613642:-1:exon
so has part: feature:613287-613414:-1:exon
so has part: feature:612465-612657:-1:exon
so has part: feature:611459-611636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617553-617605:-1:exon

position:617553:-1
position: 617553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616874-617055:-1:exon

position:616874:-1
position: 616874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617055:-1
position: 617055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616354:-1:exon

position:616249:-1
position: 616249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616354:-1
position: 616354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615295-615378:-1:exon

position:615295:-1
position: 615295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615378:-1
position: 615378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615052-615124:-1:exon

position:615052:-1
position: 615052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615124:-1
position: 615124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613525-613642:-1:exon

position:613525:-1
position: 613525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613642:-1
position: 613642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:613287-613414:-1:exon

position:613287:-1
position: 613287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613414:-1
position: 613414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:612465-612657:-1:exon

position:612465:-1
position: 612465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612657:-1
position: 612657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:611459-611636:-1:exon

position:611636:-1
position: 611636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X1
translation: MSEEGAGGGVRRSGGFPSPVPSLEQMLAANPGKTPISLLQEYGTRLGKTPGYDLLKAEGQAHQPNFTFRVTVGDISCTGQGPSKKAAKHKAAEVALKLLKGGDMLEPTTPQDPRSSLPPEPPTELCPTAAPSAPTGAPPSPRGTPLEMKTPMSPPQAECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFLEIGSGTSKKLAKRNAAAKMLLRIHNVPVEPREGSEAEAEEDQFSMAGPRLEGLRGRPPPGCTWDSLRNSVGQKLLELRNRPLGPPGTGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPAAVCHGAAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(611479..611636,612465..612657,613287..613414,613525..613642,615052..615124,615295..615378,616249..616354,616874..617055,617553..617605))
location: region:611479-617605:-1
so has part: feature:617553-617605:-1:exon
so has part: feature:616874-617055:-1:exon
so has part: feature:616249-616354:-1:exon
so has part: feature:615295-615378:-1:exon
so has part: feature:615052-615124:-1:exon
so has part: feature:613525-613642:-1:exon
so has part: feature:613287-613414:-1:exon
so has part: feature:612465-612657:-1:exon
so has part: feature:611479-611636:-1:exon

XP_030323953.1
type: Protein
SIO_000068: ncbiprotein

position:611479:-1
position: 611479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617553-617605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616874-617055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615295-615378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615052-615124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613525-613642:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:613287-613414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612465-612657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611479-611636:-1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030468094.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(611479..611636,612465..612657,613287..613414,613525..613642,615052..615124,616249..616354,616874..617055,617553..617604))
location: region:611479-617604:-1
so has part: feature:617553-617604:-1:exon
so has part: feature:616874-617055:-1:exon
so has part: feature:616249-616354:-1:exon
so has part: feature:615052-615124:-1:exon
so has part: feature:613525-613642:-1:exon
so has part: feature:613287-613414:-1:exon
so has part: feature:612465-612657:-1:exon
so has part: feature:611479-611636:-1:exon

position:617604:-1
position: 617604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617553-617604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616874-617055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615052-615124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613525-613642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613287-613414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612465-612657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611479-611636:-1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X2
translation: MLAANPGKTPISLLQEYGTRLGKTPGYDLLKAEGQAHQPNFTFRVTVGDISCTGQGPSKKAAKHKAAEVALKLLKGGDMLEPTTPQDPRGTPLEMKTPMSPPQAECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFLEIGSGTSKKLAKRNAAAKMLLRIHNVPVEPREGSEAEAEEDQFSMAGPRLEGLRGRPPPGCTWDSLRNSVGQKLLELRNRPLGPPGTGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPAAVCHGAAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(611479..611636,612465..612657,613287..613414,613525..613642,615052..615124,616249..616354,616874..617033))
location: region:611479-617033:-1
so has part: feature:616874-617033:-1:exon
so has part: feature:616249-616354:-1:exon
so has part: feature:615052-615124:-1:exon
so has part: feature:613525-613642:-1:exon
so has part: feature:613287-613414:-1:exon
so has part: feature:612465-612657:-1:exon
so has part: feature:611479-611636:-1:exon

XP_030323954.1
type: Protein
SIO_000068: ncbiprotein

position:617033:-1
position: 617033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616874-617033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616249-616354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615052-615124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613525-613642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613287-613414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:612465-612657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611479-611636:-1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621436..630917
location: region:621436-630917:1
so has part: feature:621436-630917:1:exon
subclass of: SO_0000010

103536711
type: Gene
SIO_000068: ncbigene

position:621436:1
position: 621436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630917:1
position: 630917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621436-630917:1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468133.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(621436..621766,622181..622364,622943..623134,623622..623780,624199..624357,624935..625043,625441..625550,626159..626275,626785..626922,627309..627790,628546..628616,629501..629759,630825..630917)
location: region:621436-630917:1
so has part: feature:621436-621766:1:exon
so has part: feature:622181-622364:1:exon
so has part: feature:622943-623134:1:exon
so has part: feature:623622-623780:1:exon
so has part: feature:624199-624357:1:exon
so has part: feature:624935-625043:1:exon
so has part: feature:625441-625550:1:exon
so has part: feature:626159-626275:1:exon
so has part: feature:626785-626922:1:exon
so has part: feature:627309-627790:1:exon
so has part: feature:628546-628616:1:exon
so has part: feature:629501-629759:1:exon
so has part: feature:630825-630917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621436-621766:1:exon

position:621766:1
position: 621766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622181-622364:1:exon

position:622181:1
position: 622181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622364:1
position: 622364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622943-623134:1:exon

position:622943:1
position: 622943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623134:1
position: 623134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623622-623780:1:exon

position:623622:1
position: 623622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623780:1
position: 623780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624199-624357:1:exon

position:624199:1
position: 624199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624357:1
position: 624357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624935-625043:1:exon

position:624935:1
position: 624935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625043:1
position: 625043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625441-625550:1:exon

position:625441:1
position: 625441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625550:1
position: 625550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:626159-626275:1:exon

position:626159:1
position: 626159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626275:1
position: 626275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:626785-626922:1:exon

position:626785:1
position: 626785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626922:1
position: 626922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:627309-627790:1:exon

position:627309:1
position: 627309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627790:1
position: 627790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:628546-628616:1:exon

position:628546:1
position: 628546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628616:1
position: 628616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:629501-629759:1:exon

position:629501:1
position: 629501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629759:1
position: 629759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:630825-630917:1:exon

position:630825:1
position: 630825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP3K12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 12
translation: MACLHETRTPSPSLALPSDGTPEQDLTPTQCVLRDLLPPAAPPAPPEPWPRRGTPRHPDLGAEGPLGAEGAQLRCQAGGGGFLEGLFGCLRPVWTMIGKAYGAEHKHPQEDPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSGCPDGFKVLLRQCWNSRPRNRPSFRQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRAPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDVAMAQVALPGCPKGPPPSPGRSRRAKGRHRKSGPRGGGGSSCGDPGPELGTPRGLPGPPHPTPTGPDLLGGTLEVGAGAAPPPEPLPGDVELGGATGSQGGTPTPDPPAAGEPEREIGTPRGGKGGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGEGEGEEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAPHPLEGPERRPEGGSPKVSEDSDCDSAELDHSGSGEGPPRPPAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(621436..621766,622181..622364,622943..623134,623622..623780,624199..624357,624935..625043,625441..625550,626159..626275,626785..626922,627309..627790,628546..628616,629501..629759,630825..630917)
location: region:621436-630917:1
so has part: feature:621436-621766:1:exon
so has part: feature:622181-622364:1:exon
so has part: feature:622943-623134:1:exon
so has part: feature:623622-623780:1:exon
so has part: feature:624199-624357:1:exon
so has part: feature:624935-625043:1:exon
so has part: feature:625441-625550:1:exon
so has part: feature:626159-626275:1:exon
so has part: feature:626785-626922:1:exon
so has part: feature:627309-627790:1:exon
so has part: feature:628546-628616:1:exon
so has part: feature:629501-629759:1:exon
so has part: feature:630825-630917:1:exon

XP_030323993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621436-621766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622181-622364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622943-623134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623622-623780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:624199-624357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:624935-625043:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625441-625550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:626159-626275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:626785-626922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627309-627790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628546-628616:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:629501-629759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630825-630917:1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880846..901370
location: region:880846-901370:1
so has part: feature:880846-901370:1:exon
subclass of: SO_0000010

103533016
type: Gene
SIO_000068: ncbigene

position:880846:1
position: 880846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901370:1
position: 901370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880846-901370:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 5 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468183.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880846..880993,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896328..896496,896713..901370)
location: region:880846-901370:1
so has part: feature:880846-880993:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896328-896496:1:exon
so has part: feature:896713-901370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880846-880993:1:exon

position:880993:1
position: 880993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886183-886330:1:exon

position:886183:1
position: 886183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886330:1
position: 886330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

position:886965:1
position: 886965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887123:1
position: 887123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

position:887447:1
position: 887447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887522:1
position: 887522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

position:887974:1
position: 887974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888110:1
position: 888110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

position:888204:1
position: 888204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888307:1
position: 888307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

position:889134:1
position: 889134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889244:1
position: 889244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

position:889609:1
position: 889609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889662:1
position: 889662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

position:890261:1
position: 890261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890470:1
position: 890470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

position:890948:1
position: 890948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891051:1
position: 891051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

position:894316:1
position: 894316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894549:1
position: 894549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

position:895342:1
position: 895342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895390:1
position: 895390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

position:895577:1
position: 895577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895735:1
position: 895735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

position:895915:1
position: 895915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896036:1
position: 896036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:896328-896496:1:exon

position:896328:1
position: 896328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896496:1
position: 896496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:896713-901370:1:exon

position:896713:1
position: 896713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468182.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880883..880993,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..901370)
location: region:880883-901370:1
so has part: feature:880883-880993:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-901370:1:exon

position:880883:1
position: 880883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880883-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886183-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896325-896496:1:exon

position:896325:1
position: 896325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:896713-901370:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468185.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880899..880993,885828..885991,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..901370)
location: region:880899-901370:1
so has part: feature:880899-880993:1:exon
so has part: feature:885828-885991:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-901370:1:exon

position:880899:1
position: 880899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880899-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885828-885991:1:exon

position:885828:1
position: 885828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885991:1
position: 885991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886183-886330:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896325-896496:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:896713-901370:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468186.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880899..880993,885828..885991,886186..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..901370)
location: region:880899-901370:1
so has part: feature:880899-880993:1:exon
so has part: feature:885828-885991:1:exon
so has part: feature:886186-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-901370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880899-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885828-885991:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886186-886330:1:exon

position:886186:1
position: 886186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896325-896496:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:896713-901370:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468184.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880915..880993,886186..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896328..896496,896713..901370)
location: region:880915-901370:1
so has part: feature:880915-880993:1:exon
so has part: feature:886186-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896328-896496:1:exon
so has part: feature:896713-901370:1:exon

position:880915:1
position: 880915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880915-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886186-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896328-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-901370:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGSEHSWQETAAAQGAQTEGNIEISEESCKQYEVMYSPSCEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGEGSSTVSTEDIRECLKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYTQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSASSEHSVEGPAAISPLPMGEGPLNRTNSRNFLMERHNSTLTGHQDQGYSQKDSPTAQMEQNGDYGIGRGRRNVFRGRRRREDERVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKIPGESVLESRMSDIVKGVCREKESKDLLPSCPAPAQEEQTPSTVQQPVTSVSSPSQTEAVVLSSTVQPDSKPEEVSAQKDVTSHASPPASVSPVSAAKPPRTNTTSPPANASAAPALSLQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKTEENIPAEKAPEKAHEKVEGRMKDYSGFRGNGPPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880976..880993,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..897048)
location: region:880976-897048:1
so has part: feature:880976-880993:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-897048:1:exon

XP_030324042.1
type: Protein
SIO_000068: ncbiprotein

position:880976:1
position: 880976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897048:1
position: 897048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880976-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886183-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896325-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-897048:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGSEHSWQETAAAQGAQTEGNIEISEESCKQYEVMYSPSCEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGEGSSTVSTEDIRECLKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYTQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSASSEHSVEGPAAISPLPMGEGPLNRTNSRNFLMERHNSTLTGHQDQGYSQKDSPTAQMEQNGDYGIGRGRRNVFRGRRRREDERVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKIPGESVLESRMSDIVKGVCREKESKDLLPSCPAPAQEEQTPSTVQQPVTSVSSPSQTEAVVLSTVQPDSKPEEVSAQKDVTSHASPPASVSPVSAAKPPRTNTTSPPANASAAPALSLQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKTEENIPAEKAPEKAHEKVEGRMKDYSGFRGNGPPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880976..880993,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896328..896496,896713..897048)
location: region:880976-897048:1
so has part: feature:880976-880993:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896328-896496:1:exon
so has part: feature:896713-897048:1:exon

XP_030324043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:880976-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886183-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896328-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-897048:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MLLFVEVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGSEHSWQETAAAQGAQTEGNIEISEESCKQYEVMYSPSCEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGEGSSTVSTEDIRECLKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYTQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSASSEHSVEGPAAISPLPMGEGPLNRTNSRNFLMERHNSTLTGHQDQGYSQKDSPTAQMEQNGDYGIGRGRRNVFRGRRRREDERVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKIPGESVLESRMSDIVKGVCREKESKDLLPSCPAPAQEEQTPSTVQQPVTSVSSPSQTEAVVLSTVQPDSKPEEVSAQKDVTSHASPPASVSPVSAAKPPRTNTTSPPANASAAPALSLQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKTEENIPAEKAPEKAHEKVEGRMKDYSGFRGNGPPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(880976..880993,886186..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896328..896496,896713..897048)
location: region:880976-897048:1
so has part: feature:880976-880993:1:exon
so has part: feature:886186-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896328-896496:1:exon
so has part: feature:896713-897048:1:exon

XP_030324044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:880976-880993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886186-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896328-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-897048:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X4
translation: MEQVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGSEHSWQETAAAQGAQTEGNIEISEESCKQYEVMYSPSCEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGEGSSTVSTEDIRECLKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYTQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSASSEHSVEGPAAISPLPMGEGPLNRTNSRNFLMERHNSTLTGHQDQGYSQKDSPTAQMEQNGDYGIGRGRRNVFRGRRRREDERVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKIPGESVLESRMSDIVKGVCREKESKDLLPSCPAPAQEEQTPSTVQQPVTSVSSPSQTEAVVLSSTVQPDSKPEEVSAQKDVTSHASPPASVSPVSAAKPPRTNTTSPPANASAAPALSLQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKTEENIPAEKAPEKAHEKVEGRMKDYSGFRGNGPPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(885986..885991,886183..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..897048)
location: region:885986-897048:1
so has part: feature:885986-885991:1:exon
so has part: feature:886183-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-897048:1:exon

XP_030324045.1
type: Protein
SIO_000068: ncbiprotein

position:885986:1
position: 885986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885986-885991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886183-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896325-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-897048:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X5
translation: MEVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGSEHSWQETAAAQGAQTEGNIEISEESCKQYEVMYSPSCEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGEGSSTVSTEDIRECLKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYTQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSASSEHSVEGPAAISPLPMGEGPLNRTNSRNFLMERHNSTLTGHQDQGYSQKDSPTAQMEQNGDYGIGRGRRNVFRGRRRREDERVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKIPGESVLESRMSDIVKGVCREKESKDLLPSCPAPAQEEQTPSTVQQPVTSVSSPSQTEAVVLSSTVQPDSKPEEVSAQKDVTSHASPPASVSPVSAAKPPRTNTTSPPANASAAPALSLQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKTEENIPAEKAPEKAHEKVEGRMKDYSGFRGNGPPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(885986..885991,886186..886330,886965..887123,887447..887522,887974..888110,888204..888307,889134..889244,889609..889662,890261..890470,890948..891051,894316..894549,895342..895390,895577..895735,895915..896036,896325..896496,896713..897048)
location: region:885986-897048:1
so has part: feature:885986-885991:1:exon
so has part: feature:886186-886330:1:exon
so has part: feature:886965-887123:1:exon
so has part: feature:887447-887522:1:exon
so has part: feature:887974-888110:1:exon
so has part: feature:888204-888307:1:exon
so has part: feature:889134-889244:1:exon
so has part: feature:889609-889662:1:exon
so has part: feature:890261-890470:1:exon
so has part: feature:890948-891051:1:exon
so has part: feature:894316-894549:1:exon
so has part: feature:895342-895390:1:exon
so has part: feature:895577-895735:1:exon
so has part: feature:895915-896036:1:exon
so has part: feature:896325-896496:1:exon
so has part: feature:896713-897048:1:exon

XP_030324046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:885986-885991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886186-886330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886965-887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887447-887522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887974-888110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888204-888307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889134-889244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889609-889662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890261-890470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890948-891051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:894316-894549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895342-895390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895577-895735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895915-896036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:896325-896496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:896713-897048:1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902534..965734
location: region:902534-965734:1
so has part: feature:902534-965734:1:exon
subclass of: SO_0000010

103533005
type: Gene
SIO_000068: ncbigene

position:902534:1
position: 902534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965734:1
position: 965734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902534-965734:1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 3 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468112.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902534..902784,929877..929948,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..965734)
location: region:902534-965734:1
so has part: feature:902534-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-965734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902534-902784:1:exon

position:902784:1
position: 902784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

position:929877:1
position: 929877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929948:1
position: 929948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

position:934640:1
position: 934640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934783:1
position: 934783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

position:935746:1
position: 935746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935871:1
position: 935871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:937520-937732:1:exon

position:937520:1
position: 937520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937732:1
position: 937732
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:940025-940168:1:exon

position:940025:1
position: 940025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940168:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:941128-941247:1:exon

position:941128:1
position: 941128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941247:1
position: 941247
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:941824-942021:1:exon

position:941824:1
position: 941824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942021:1
position: 942021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:942239-942330:1:exon

position:942239:1
position: 942239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942330:1
position: 942330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:942823-942933:1:exon

position:942823:1
position: 942823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942933:1
position: 942933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:944402-944525:1:exon

position:944402:1
position: 944402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944525:1
position: 944525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:945037-945146:1:exon

position:945037:1
position: 945037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945146:1
position: 945146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:945903-946005:1:exon

position:945903:1
position: 945903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946005:1
position: 946005
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:946647-946711:1:exon

position:946647:1
position: 946647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946711:1
position: 946711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:946973-947066:1:exon

position:946973:1
position: 946973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947066:1
position: 947066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:947599-947718:1:exon

position:947599:1
position: 947599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947718:1
position: 947718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:948490-948604:1:exon

position:948490:1
position: 948490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948604:1
position: 948604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:949290-949429:1:exon

position:949290:1
position: 949290
reference: sequence
type: ForwardStrandPosition
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position:949429:1
position: 949429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:949613-949749:1:exon

position:949613:1
position: 949613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949749:1
position: 949749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:950052-950132:1:exon

position:950052:1
position: 950052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950132:1
position: 950132
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:950615-950742:1:exon

position:950615:1
position: 950615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950742:1
position: 950742
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:951481-951595:1:exon

position:951481:1
position: 951481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951595:1
position: 951595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:952513-952714:1:exon

position:952513:1
position: 952513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952714:1
position: 952714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:953119-953228:1:exon

position:953119:1
position: 953119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953228:1
position: 953228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:953360-953440:1:exon

position:953360:1
position: 953360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953440:1
position: 953440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:953960-954083:1:exon

position:953960:1
position: 953960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954083:1
position: 954083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:955025-955146:1:exon

position:955025:1
position: 955025
reference: sequence
type: ForwardStrandPosition
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position:955146:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:955692-955803:1:exon

position:955692:1
position: 955692
reference: sequence
type: ForwardStrandPosition
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position:955803:1
position: 955803
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:956279-956388:1:exon

position:956279:1
position: 956279
reference: sequence
type: ForwardStrandPosition
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position:956388:1
position: 956388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:957027-957157:1:exon

position:957027:1
position: 957027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957157:1
position: 957157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:957733-957901:1:exon

position:957733:1
position: 957733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957901:1
position: 957901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:958835-959005:1:exon

position:958835:1
position: 958835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959005:1
position: 959005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:959361-959422:1:exon

position:959361:1
position: 959361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959422:1
position: 959422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:959541-959598:1:exon

position:959541:1
position: 959541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959598:1
position: 959598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:960172-960246:1:exon

position:960172:1
position: 960172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960246:1
position: 960246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:960833-961010:1:exon

position:960833:1
position: 960833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961010:1
position: 961010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:961184-961307:1:exon

position:961184:1
position: 961184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961307:1
position: 961307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:961799-965734:1:exon

position:961799:1
position: 961799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468113.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902534..902784,929877..929948,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942915,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..965734)
location: region:902534-965734:1
so has part: feature:902534-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942915:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-965734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902534-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937520-937732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:942823-942915:1:exon

position:942915:1
position: 942915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:961799-965734:1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468115.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902534..902784,929877..929948,934640..934783,935746..935871,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..965734)
location: region:902534-965734:1
so has part: feature:902534-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-965734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902534-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942823-942933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961799-965734:1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468114.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902534..902784,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..965734)
location: region:902534-965734:1
so has part: feature:902534-902784:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-965734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902534-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937520-937732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942823-942933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961799-965734:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MAETAASGVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGADPVLQKEARTQMPAPSAAPASAAPSSSSSKYHRGRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVTLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSAGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902697..902784,929877..929948,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..962051)
location: region:902697-962051:1
so has part: feature:902697-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-962051:1:exon

XP_030323972.1
type: Protein
SIO_000068: ncbiprotein

position:902697:1
position: 902697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962051:1
position: 962051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902697-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937520-937732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:942823-942933:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:961799-962051:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAETAASGVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGADPVLQKEARTQMPAPSAAPASAAPSSSSSKYHRGRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVTLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSAGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902697..902784,929877..929948,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942915,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..962051)
location: region:902697-962051:1
so has part: feature:902697-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942915:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-962051:1:exon

XP_030323973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902697-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937520-937732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:942823-942915:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:961799-962051:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X4
translation: MAETAASGVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGADPVLQKEARTQMPAPSAAPASAAPSSSSSKYHRGRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPENFSVPPDVTATTSSSSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVTLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSAGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902697..902784,929877..929948,934640..934783,935746..935871,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..962051)
location: region:902697-962051:1
so has part: feature:902697-902784:1:exon
so has part: feature:929877-929948:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-962051:1:exon

XP_030323975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902697-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929877-929948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942823-942933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961799-962051:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X3
translation: MAETAASGVSSLPREVREQLAELELELSEGADPVLQKEARTQMPAPSAAPASAAPSSSSSKYHRGRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVTLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSAGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(902697..902784,934640..934783,935746..935871,937520..937732,940025..940168,941128..941247,941824..942021,942239..942330,942823..942933,944402..944525,945037..945146,945903..946005,946647..946711,946973..947066,947599..947718,948490..948604,949290..949429,949613..949749,950052..950132,950615..950742,951481..951595,952513..952714,953119..953228,953360..953440,953960..954083,955025..955146,955692..955803,956279..956388,957027..957157,957733..957901,958835..959005,959361..959422,959541..959598,960172..960246,960833..961010,961184..961307,961799..962051)
location: region:902697-962051:1
so has part: feature:902697-902784:1:exon
so has part: feature:934640-934783:1:exon
so has part: feature:935746-935871:1:exon
so has part: feature:937520-937732:1:exon
so has part: feature:940025-940168:1:exon
so has part: feature:941128-941247:1:exon
so has part: feature:941824-942021:1:exon
so has part: feature:942239-942330:1:exon
so has part: feature:942823-942933:1:exon
so has part: feature:944402-944525:1:exon
so has part: feature:945037-945146:1:exon
so has part: feature:945903-946005:1:exon
so has part: feature:946647-946711:1:exon
so has part: feature:946973-947066:1:exon
so has part: feature:947599-947718:1:exon
so has part: feature:948490-948604:1:exon
so has part: feature:949290-949429:1:exon
so has part: feature:949613-949749:1:exon
so has part: feature:950052-950132:1:exon
so has part: feature:950615-950742:1:exon
so has part: feature:951481-951595:1:exon
so has part: feature:952513-952714:1:exon
so has part: feature:953119-953228:1:exon
so has part: feature:953360-953440:1:exon
so has part: feature:953960-954083:1:exon
so has part: feature:955025-955146:1:exon
so has part: feature:955692-955803:1:exon
so has part: feature:956279-956388:1:exon
so has part: feature:957027-957157:1:exon
so has part: feature:957733-957901:1:exon
so has part: feature:958835-959005:1:exon
so has part: feature:959361-959422:1:exon
so has part: feature:959541-959598:1:exon
so has part: feature:960172-960246:1:exon
so has part: feature:960833-961010:1:exon
so has part: feature:961184-961307:1:exon
so has part: feature:961799-962051:1:exon

XP_030323974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902697-902784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934640-934783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935746-935871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937520-937732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940025-940168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:941128-941247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941824-942021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:942239-942330:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:942823-942933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944402-944525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:945037-945146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945903-946005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946647-946711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:946973-947066:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:947599-947718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948490-948604:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:949290-949429:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:949613-949749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:950052-950132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:950615-950742:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:951481-951595:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:952513-952714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:953119-953228:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:953360-953440:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:953960-954083:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:955025-955146:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:955692-955803:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:956279-956388:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:957027-957157:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:957733-957901:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:958835-959005:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:959361-959422:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:959541-959598:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:960172-960246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:960833-961010:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:961184-961307:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:961799-962051:1:exon

GLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(968885..977953)
location: region:968885-977953:-1
so has part: feature:968885-977953:-1:exon
subclass of: SO_0000010

103533006
type: Gene
SIO_000068: ncbigene

position:968885:-1
position: 968885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977953:-1
position: 977953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968885-977953:-1:exon

GLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GLI1
product: GLI family zinc finger 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008498823.2
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: complement(join(968885..971175,971897..972176,973147..973383,973944..974108,974543..974692,975245..975385,975516..975617,975713..975875,976249..976444,977605..977700,977866..977953))
location: region:968885-977953:-1
so has part: feature:977866-977953:-1:exon
so has part: feature:977605-977700:-1:exon
so has part: feature:976249-976444:-1:exon
so has part: feature:975713-975875:-1:exon
so has part: feature:975516-975617:-1:exon
so has part: feature:975245-975385:-1:exon
so has part: feature:974543-974692:-1:exon
so has part: feature:973944-974108:-1:exon
so has part: feature:973147-973383:-1:exon
so has part: feature:971897-972176:-1:exon
so has part: feature:968885-971175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:977866-977953:-1:exon

position:977866:-1
position: 977866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977605-977700:-1:exon

position:977605:-1
position: 977605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977700:-1
position: 977700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976249-976444:-1:exon

position:976249:-1
position: 976249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976444:-1
position: 976444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:975713-975875:-1:exon

position:975713:-1
position: 975713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975875:-1
position: 975875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975516-975617:-1:exon

position:975516:-1
position: 975516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975617:-1
position: 975617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975245-975385:-1:exon

position:975245:-1
position: 975245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975385:-1
position: 975385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:974543-974692:-1:exon

position:974543:-1
position: 974543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974692:-1
position: 974692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973944-974108:-1:exon

position:973944:-1
position: 973944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974108:-1
position: 974108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973147-973383:-1:exon

position:973147:-1
position: 973147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973383:-1
position: 973383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:971897-972176:-1:exon

position:971897:-1
position: 971897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972176:-1
position: 972176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:968885-971175:-1:exon

position:971175:-1
position: 971175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein GLI1
translation: MFSPVSPPVTSYPEQCCLRPPYGPAPGPQGLDFPLCHQSNPMSSHRGYGLVPGAEHPGSGDGSRYSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCTSATGSYGHLSISTISPSLGYQSPLGQQKGQGHLYSHTTPPPPCTSHEHSSTRPGLLHHGPAHGTLKHCQQLKLEWSLSSPLTAKYPEEGPEGDISSPASTGTQDPLLGMLDVREDLEKEDGKPESETVYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDIVPGRALPVPSGAPDMKQEKDAEGRKDDAKLTVPDLALKPQPSPGGQSSCSSDHSPLGSTTNNDSGVEMAGNAGGSYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQMRKPSTTKGLSLPAIPGAGPPGEVPVLSLQPPAASHRRVAELSVAEVAVPPRERRSSSTSTVSSAYTVSRRSSLVSPHLAAPCLGGEAGAVPGPGDGYDPISPDESRRSSDAGGALPALGSLTPAQRYRLKAKYAAATGGPPPTPLSATERVGMGGGGHGSFPGDYLGPAESRFLANGLQRRHSSNEHPGYVGSLSPHLVPGNGGRRASDPARTTPNLPAVPKVHRFKSMGNVNVPGVGRTALQPLGGSDANLQHHVFSPHPPSISENVFLESVSSLEGSGSEPGLLEMEQYLNCPVESFPCHDGEHQCEGLYGSAHRTMGGMQLNPGGHGDMEEGLLQSEFSLPQCQMNQHFTSMHSGNGIMPAPWNEPTQGNLEMSSGQSSVSARPRCHHQSMEYQLPSSCGQQPRLVSSCQASGFPGVQRLNRLQIKSEQRYPAPAPALAPCQNTKLAGPMQGPASFGQALNVGLGGFQPEEQAPLSYMGMLSPLSPGTRRVQTPSKEVMVRNYVQAQQALMWGDQMASKRGEAAMGLGSEAGQCQAMQAPLPLSPKYSGYQAKPDHLQGLPETKHLLSAPCFNPEMVPHPPGGPKPPGHQNTMNYMGNLAQPSHSYEGVEPSTQRLHRLPPTHLTHEGPSSALLQYPGQGTHIQVDKSGHKLPGQTAGSCGDPRHSSRNLEGFKDSSCYYLDSGEQVANSLDSLDLENTHLDFAAIMEDPETTALLPGPPSPSGGLLLPASGGANMAVGDMSSMLSTLAGESHFLNSLS
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: complement(join(968939..971175,971897..972176,973147..973383,973944..974108,974543..974692,975245..975385,975516..975617,975713..975875,976249..976444,977605..977700,977866..977953))
location: region:968939-977953:-1
so has part: feature:977866-977953:-1:exon
so has part: feature:977605-977700:-1:exon
so has part: feature:976249-976444:-1:exon
so has part: feature:975713-975875:-1:exon
so has part: feature:975516-975617:-1:exon
so has part: feature:975245-975385:-1:exon
so has part: feature:974543-974692:-1:exon
so has part: feature:973944-974108:-1:exon
so has part: feature:973147-973383:-1:exon
so has part: feature:971897-972176:-1:exon
so has part: feature:968939-971175:-1:exon

XP_008497045.2
type: Protein
SIO_000068: ncbiprotein

position:968939:-1
position: 968939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977866-977953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977605-977700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976249-976444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:975713-975875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975516-975617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975245-975385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974543-974692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973944-974108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973147-973383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:971897-972176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968939-971175:-1:exon

INHBE
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: INHBE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991589..994597)
location: region:991589-994597:-1
so has part: feature:991589-994597:-1:exon
subclass of: SO_0000010

103533017
type: Gene
SIO_000068: ncbigene

position:991589:-1
position: 991589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994597:-1
position: 994597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991589-994597:-1:exon

INHBE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: INHBE
product: inhibin subunit beta E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030468131.1
SIO_010081: INHBE
subclass of: SO_0000673
so part of: INHBE
location: complement(join(991589..993417,994297..994597))
location: region:991589-994597:-1
so has part: feature:994297-994597:-1:exon
so has part: feature:991589-993417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:994297-994597:-1:exon

position:994297:-1
position: 994297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991589-993417:-1:exon

position:993417:-1
position: 993417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INHBE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: INHBE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibin beta E chain
translation: MAARGAVLWLLLAAVLCAAAEPRCPSCAAGAERRLLEEVAKRQLLEKLRLRERPRLSHAVPRAAVARALRRLQAGGARRGPDGDDDDEERAYEIISFAEPEPMSPSGLGLQFQFSRPQDQDIHILRAQLWLYLRVPRDLVSSLTLRIFLAGGEGDLVGGNRTLLSERRLSSKGSGWRAFSLLPALQRFFLGERRALRLELESRGDRGDIMAIVDASRSQQPFLVAEAKLREPGHRVAKRSLRCSQNSNLCCRRDYYVDFRDIGWNDWIIKPEGYQINYCVGQCPLHVAGSPGMASSFHTAVFNLVKANNVQASGHSCCVPTRRRPLSVLYFDRNSNIVKTDIPDMIVDACGCS
SIO_010081: INHBE
subclass of: SO_0000673
so part of: INHBE
location: complement(join(992657..993417,994297..994597))
location: region:992657-994597:-1
so has part: feature:994297-994597:-1:exon
so has part: feature:992657-993417:-1:exon

XP_030323991.1
type: Protein
SIO_000068: ncbiprotein

position:992657:-1
position: 992657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994297-994597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992657-993417:-1:exon

LOC103533018
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1000543..>1003620)
location: region:1000543-1003620:-1
so has part: feature:1000543-1003620:-1:exon
subclass of: SO_0000010

103533018
type: Gene
SIO_000068: ncbigene

position:1000543:-1
position: 1000543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003620:-1
position: 1003620
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000543-1003620:-1:exon

LOC103533018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533018
product: inhibin beta C chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008498834.2
SIO_010081: LOC103533018
subclass of: SO_0000673
so part of: LOC103533018
location: complement(join(1000543..1001828,1002948..>1003620))
location: region:1000543-1003620:-1
so has part: feature:1002948-1003620:-1:exon
so has part: feature:1000543-1001828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002948-1003620:-1:exon

position:1002948:-1
position: 1002948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000543-1001828:-1:exon

position:1001828:-1
position: 1001828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103533018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibin beta C chain-like
translation: TLREAAPSARVHLNPGRAAPRLPRARDGLLRDQRGVYLAPDQPIFVATSGERSLPPSQLLRSWVLQPRSPLSRPQRCCPSLSPVYQPAGGTQFAEIPPRAPSCHLLAPEMTTTMFFLLLSLPRLAAPKGLGCPGCGLAAPVPSTQRDILIALAKQSILSELRLPDRPNITQHTSRGTLLTALRRMRAQHRDVALSLAVPQDSNIRHPHPGMGVQEYEILSFAESGSSTSRSIRLHFHFTQELGGSTEILQATLYLFWEALSPGTHPVTVRLLQPDPMGPNMTVASEMQLVIHRAGWATLDVGPALQSLFDQGTQSLTVELEVPEDSGSPLLAGHSDSHWPFVAAQAQARTPHGVQRRSTDCGGDSGMCCRQEFFVDFKEIGWEDWIIQPEGYHMNYCSGICPLHMAGIPGLAASFHTAVLSLIKANNADAAGDSCCVPTQRRPLSLLYYDRDSNIVKTDIPDMIVDACGCT
SIO_010081: LOC103533018
subclass of: SO_0000673
so part of: LOC103533018
location: complement(join(1001086..1001828,1002948..>1003620))
location: region:1001086-1003620:-1
so has part: feature:1002948-1003620:-1:exon
so has part: feature:1001086-1001828:-1:exon

XP_008497056.2
type: Protein
SIO_000068: ncbiprotein

position:1001086:-1
position: 1001086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002948-1003620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001086-1001828:-1:exon

R3HDM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1003554..1042244
location: region:1003554-1042244:1
so has part: feature:1003554-1042244:1:exon
subclass of: SO_0000010

103533007
type: Gene
SIO_000068: ncbigene

position:1003554:1
position: 1003554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042244:1
position: 1042244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003554-1042244:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468111.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003554..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1030314..1030367,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1003554-1042204:1
so has part: feature:1003554-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1030314-1030367:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

position:1042204:1
position: 1042204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003554-1003811:1:exon

position:1003811:1
position: 1003811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

position:1022425:1
position: 1022425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022623:1
position: 1022623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

position:1023022:1
position: 1023022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023063:1
position: 1023063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

position:1024066:1
position: 1024066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024152:1
position: 1024152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

position:1024790:1
position: 1024790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024916:1
position: 1024916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

position:1025617:1
position: 1025617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025695:1
position: 1025695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

position:1026469:1
position: 1026469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026528:1
position: 1026528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

position:1027315:1
position: 1027315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027455:1
position: 1027455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

position:1027828:1
position: 1027828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027936:1
position: 1027936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

position:1029206:1
position: 1029206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029301:1
position: 1029301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

position:1030185:1
position: 1030185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030216:1
position: 1030216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1030314-1030367:1:exon

position:1030314:1
position: 1030314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030367:1
position: 1030367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1031657-1031889:1:exon

position:1031657:1
position: 1031657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031889:1
position: 1031889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1033696-1033883:1:exon

position:1033696:1
position: 1033696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033883:1
position: 1033883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1034922-1035011:1:exon

position:1034922:1
position: 1034922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035011:1
position: 1035011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1035666-1035908:1:exon

position:1035666:1
position: 1035666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035908:1
position: 1035908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1036519-1036645:1:exon

position:1036519:1
position: 1036519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036645:1
position: 1036645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1037067-1037302:1:exon

position:1037067:1
position: 1037067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037302:1
position: 1037302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1037692-1037846:1:exon

position:1037692:1
position: 1037692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037846:1
position: 1037846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1038137-1038237:1:exon

position:1038137:1
position: 1038137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038237:1
position: 1038237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1038907-1039076:1:exon

position:1038907:1
position: 1038907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039076:1
position: 1039076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1039226-1039370:1:exon

position:1039226:1
position: 1039226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039370:1
position: 1039370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1039458-1039561:1:exon

position:1039458:1
position: 1039458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039561:1
position: 1039561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1040034-1040118:1:exon

position:1040034:1
position: 1040034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040118:1
position: 1040118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1041502-1042204:1:exon

position:1041502:1
position: 1041502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468104.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003554..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1003554-1042204:1
so has part: feature:1003554-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003554-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041502-1042204:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030468110.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003554..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1003554-1042204:1
so has part: feature:1003554-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003554-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1041502-1042204:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030468109.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003555..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1003555-1042204:1
so has part: feature:1003555-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

position:1003555:1
position: 1003555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003555-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1041502-1042204:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X5
translation: MEGAEGAVRTPVVRCPVLPCRALKMSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRISKEAFSSSSQKRRQIFRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQPVPALQPVQYSPSSCPQVLLPVSPPQQYNLAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003771..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1030314..1030367,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1003771-1041845:1
so has part: feature:1003771-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1030314-1030367:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323971.1
type: Protein
SIO_000068: ncbiprotein

position:1003771:1
position: 1003771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041845:1
position: 1041845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003771-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1030314-1030367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X1
translation: MEGAEGAVRTPVVRCPVLPCRALKMSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQPVPALQPVQYSPSSCPQVLLPVSPPQQYNLAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003771..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1003771-1041845:1
so has part: feature:1003771-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1003771-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X3
translation: MEGAEGAVRTPVVRCPVLPCRALKMSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003771..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1003771-1041845:1
so has part: feature:1003771-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1003771-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X4
translation: MEGAEGAVRTPVVRCPVLPCRALKMSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1003771..1003811,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1003771-1041845:1
so has part: feature:1003771-1003811:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1003771-1003811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030468105.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1004384..1004432,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1004384-1042204:1
so has part: feature:1004384-1004432:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

position:1004384:1
position: 1004384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004384-1004432:1:exon

position:1004432:1
position: 1004432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041502-1042204:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030468106.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1004384..1004422,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042204)
location: region:1004384-1042204:1
so has part: feature:1004384-1004422:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004384-1004422:1:exon

position:1004422:1
position: 1004422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041502-1042204:1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: R3HDM2
product: R3H domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468107.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1013519..1013732,1022425..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1042244)
location: region:1013519-1042244:1
so has part: feature:1013519-1013732:1:exon
so has part: feature:1022425-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1042244:1:exon

position:1013519:1
position: 1013519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013519-1013732:1:exon

position:1013732:1
position: 1013732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022425-1022623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1041502-1042244:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X2
translation: MSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQPVPALQPVQYSPSSCPQVLLPVSPPQQYNLAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1022456..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1022456-1041845:1
so has part: feature:1022456-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323965.1
type: Protein
SIO_000068: ncbiprotein

position:1022456:1
position: 1022456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022456-1022623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X2
translation: MSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQPVPALQPVQYSPSSCPQVLLPVSPPQQYNLAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1022456..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1022456-1041845:1
so has part: feature:1022456-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022456-1022623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1041502-1041845:1:exon

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X2
translation: MSNSTTTQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKDGGEEVSVRQESQRRTSTHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGAEKEEKDKNKDKAPRRMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGYLTDSRGNRETLTRASSSRQSSTESEIKSLEPRPWSSTDSDGSIRNLRPPVTKASSFSGISILTRGDSIGSSKGSTASRTSRAGLVLGAPEACSQSPSSQPTRGLLPCTAQQPQPQPPQQPPPQPQGLPPAAAQQQPAMNNHMLSQPVPALQPVQYSPSSCPQVLLPVSPPQQYNLAEELSSPFGQISLSRQGSTEAPDPSSALFQSSLISQHPQQTGFIMAAPGQPIPTSNYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRSLSHPVAYSSQRTQQLPQQSQQPGLQSMMSNQQQTYQGVIGVQQAQPSGLLNSQRNSMGGQMQSVMGVQQAQPPGLLSSQRSSMGSQMQGMMVQYTPLPSYQVPVANESQSVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPAAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPVVQWSHCKYYSLEQRGQKPGDLYNPDTSAQASTQLNSPITSPTQSPTPSPVTNLNSVCTGLSPLPVLTQFPRPMGPVQGDGRYSLLGQPLQYNLSICPPPLLHNQPNYTSAHQGQTGMKHGNRSKRQTLKSASTDLGTSDVVLGRVLEVTDLPEGITRTEADKLFTQLAMAGAKIQWLKETQGLRGDEGSGDTSGTPENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSLSRFKLRVAKKNYDLRVLERASSQ
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: join(1022456..1022623,1023022..1023063,1024066..1024152,1024790..1024916,1025617..1025695,1026469..1026528,1027315..1027455,1027828..1027936,1029206..1029301,1030185..1030216,1031657..1031889,1033696..1033883,1034922..1035011,1035666..1035908,1036519..1036645,1037067..1037302,1037692..1037846,1038137..1038237,1038907..1039076,1039226..1039370,1039458..1039561,1040034..1040118,1041502..1041845)
location: region:1022456-1041845:1
so has part: feature:1022456-1022623:1:exon
so has part: feature:1023022-1023063:1:exon
so has part: feature:1024066-1024152:1:exon
so has part: feature:1024790-1024916:1:exon
so has part: feature:1025617-1025695:1:exon
so has part: feature:1026469-1026528:1:exon
so has part: feature:1027315-1027455:1:exon
so has part: feature:1027828-1027936:1:exon
so has part: feature:1029206-1029301:1:exon
so has part: feature:1030185-1030216:1:exon
so has part: feature:1031657-1031889:1:exon
so has part: feature:1033696-1033883:1:exon
so has part: feature:1034922-1035011:1:exon
so has part: feature:1035666-1035908:1:exon
so has part: feature:1036519-1036645:1:exon
so has part: feature:1037067-1037302:1:exon
so has part: feature:1037692-1037846:1:exon
so has part: feature:1038137-1038237:1:exon
so has part: feature:1038907-1039076:1:exon
so has part: feature:1039226-1039370:1:exon
so has part: feature:1039458-1039561:1:exon
so has part: feature:1040034-1040118:1:exon
so has part: feature:1041502-1041845:1:exon

XP_030323967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022456-1022623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023022-1023063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024066-1024152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024790-1024916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025617-1025695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026469-1026528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027315-1027455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027828-1027936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029206-1029301:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030185-1030216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031657-1031889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1033696-1033883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1034922-1035011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1035666-1035908:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036519-1036645:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1037067-1037302:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1037692-1037846:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038137-1038237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038907-1039076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1039226-1039370:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1039458-1039561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1040034-1040118:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1041502-1041845:1:exon

STAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1042921..1049539
location: region:1042921-1049539:1
so has part: feature:1042921-1049539:1:exon
subclass of: SO_0000010

103533009
type: Gene
SIO_000068: ncbigene

position:1042921:1
position: 1042921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049539:1
position: 1049539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042921-1049539:1:exon

STAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAC3
product: SH3 and cysteine rich domain 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030468192.1
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1042921..1043128,1043904..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1049539)
location: region:1042921-1049539:1
so has part: feature:1042921-1043128:1:exon
so has part: feature:1043904-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1049539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042921-1043128:1:exon

position:1043128:1
position: 1043128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1043904-1043970:1:exon

position:1043904:1
position: 1043904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043970:1
position: 1043970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044366-1044627:1:exon

position:1044366:1
position: 1044366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044627:1
position: 1044627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1044757-1044854:1:exon

position:1044757:1
position: 1044757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044854:1
position: 1044854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1045206-1045281:1:exon

position:1045206:1
position: 1045206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045281:1
position: 1045281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1045366-1045460:1:exon

position:1045366:1
position: 1045366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045460:1
position: 1045460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1045598-1045664:1:exon

position:1045598:1
position: 1045598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045664:1
position: 1045664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1045919-1045968:1:exon

position:1045919:1
position: 1045919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045968:1
position: 1045968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1046094-1046197:1:exon

position:1046094:1
position: 1046094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046197:1
position: 1046197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1046639-1046690:1:exon

position:1046639:1
position: 1046639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046690:1
position: 1046690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1046911-1047048:1:exon

position:1046911:1
position: 1046911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047048:1
position: 1047048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1047285-1049539:1:exon

position:1047285:1
position: 1047285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAC3
product: SH3 and cysteine rich domain 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030468189.1
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1042921..1043124,1043904..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1049539)
location: region:1042921-1049539:1
so has part: feature:1042921-1043124:1:exon
so has part: feature:1043904-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1049539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042921-1043124:1:exon

position:1043124:1
position: 1043124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1043904-1043970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044366-1044627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1047285-1049539:1:exon

STAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAC3
product: SH3 and cysteine rich domain 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030468190.1
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1042937..1043132,1043904..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1049539)
location: region:1042937-1049539:1
so has part: feature:1042937-1043132:1:exon
so has part: feature:1043904-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1049539:1:exon

position:1042937:1
position: 1042937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042937-1043132:1:exon

position:1043132:1
position: 1043132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1043904-1043970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044366-1044627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1047285-1049539:1:exon

STAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAC3
product: SH3 and cysteine rich domain 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030468193.1
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1042939..1043128,1043904..1043970,1044369..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1049539)
location: region:1042939-1049539:1
so has part: feature:1042939-1043128:1:exon
so has part: feature:1043904-1043970:1:exon
so has part: feature:1044369-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1049539:1:exon

position:1042939:1
position: 1042939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042939-1043128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1043904-1043970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044369-1044627:1:exon

position:1044369:1
position: 1044369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1047285-1049539:1:exon

STAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAC3
product: SH3 and cysteine rich domain 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_008498825.2
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1042939..1043124,1043904..1043970,1044369..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1049539)
location: region:1042939-1049539:1
so has part: feature:1042939-1043124:1:exon
so has part: feature:1043904-1043970:1:exon
so has part: feature:1044369-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1049539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1042939-1043124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1043904-1043970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044369-1044627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1047285-1049539:1:exon

STAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X1
translation: MTEKEVPEPPASPASGGKTMSRQLQKLKQLFQRKPKEETAPEPQPNGELVSPSGGPIYYIYEEEEEEEEEEEPEPPPEPEKLVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQTYVEMQRCFGKIPPGFRRAYSSPLYSDQQNTCGKEPLSANRSDPVFETLRTGVIMANKERKKGQNDKKNPLAAMMDEEPEAMKPGEGKAEGGTSEGNKKTEKSPTDDKSKKTQPGTRGGFPQSHYFVALYRFKALEKDDLDFPPGEKITVVDDSNEEWWRGKIGEKIGYFPPNFIIRVRAGERVHKVTRSFVGNKEIGQITLKKDQIVVQKGEEVNGYVKVYTGRKVGLFPVDFLQEI
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1043905..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1047383)
location: region:1043905-1047383:1
so has part: feature:1043905-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1047383:1:exon

XP_030324049.1
type: Protein
SIO_000068: ncbiprotein

position:1043905:1
position: 1043905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047383:1
position: 1047383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043905-1043970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044366-1044627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1047285-1047383:1:exon

STAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X1
translation: MTEKEVPEPPASPASGGKTMSRQLQKLKQLFQRKPKEETAPEPQPNGELVSPSGGPIYYIYEEEEEEEEEEEPEPPPEPEKLVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQTYVEMQRCFGKIPPGFRRAYSSPLYSDQQNTCGKEPLSANRSDPVFETLRTGVIMANKERKKGQNDKKNPLAAMMDEEPEAMKPGEGKAEGGTSEGNKKTEKSPTDDKSKKTQPGTRGGFPQSHYFVALYRFKALEKDDLDFPPGEKITVVDDSNEEWWRGKIGEKIGYFPPNFIIRVRAGERVHKVTRSFVGNKEIGQITLKKDQIVVQKGEEVNGYVKVYTGRKVGLFPVDFLQEI
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1043905..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1047383)
location: region:1043905-1047383:1
so has part: feature:1043905-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1047383:1:exon

XP_030324050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043905-1043970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044366-1044627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1047285-1047383:1:exon

STAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X1
translation: MTEKEVPEPPASPASGGKTMSRQLQKLKQLFQRKPKEETAPEPQPNGELVSPSGGPIYYIYEEEEEEEEEEEPEPPPEPEKLVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQTYVEMQRCFGKIPPGFRRAYSSPLYSDQQNTCGKEPLSANRSDPVFETLRTGVIMANKERKKGQNDKKNPLAAMMDEEPEAMKPGEGKAEGGTSEGNKKTEKSPTDDKSKKTQPGTRGGFPQSHYFVALYRFKALEKDDLDFPPGEKITVVDDSNEEWWRGKIGEKIGYFPPNFIIRVRAGERVHKVTRSFVGNKEIGQITLKKDQIVVQKGEEVNGYVKVYTGRKVGLFPVDFLQEI
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1043905..1043970,1044366..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1047383)
location: region:1043905-1047383:1
so has part: feature:1043905-1043970:1:exon
so has part: feature:1044366-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1047383:1:exon

XP_030324052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043905-1043970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044366-1044627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1047285-1047383:1:exon

STAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X2
translation: MTEKEVPEPPASPASGGKTMSRLQKLKQLFQRKPKEETAPEPQPNGELVSPSGGPIYYIYEEEEEEEEEEEPEPPPEPEKLVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQTYVEMQRCFGKIPPGFRRAYSSPLYSDQQNTCGKEPLSANRSDPVFETLRTGVIMANKERKKGQNDKKNPLAAMMDEEPEAMKPGEGKAEGGTSEGNKKTEKSPTDDKSKKTQPGTRGGFPQSHYFVALYRFKALEKDDLDFPPGEKITVVDDSNEEWWRGKIGEKIGYFPPNFIIRVRAGERVHKVTRSFVGNKEIGQITLKKDQIVVQKGEEVNGYVKVYTGRKVGLFPVDFLQEI
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1043905..1043970,1044369..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1047383)
location: region:1043905-1047383:1
so has part: feature:1043905-1043970:1:exon
so has part: feature:1044369-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1047383:1:exon

XP_030324053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043905-1043970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044369-1044627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1047285-1047383:1:exon

STAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X2
translation: MTEKEVPEPPASPASGGKTMSRLQKLKQLFQRKPKEETAPEPQPNGELVSPSGGPIYYIYEEEEEEEEEEEPEPPPEPEKLVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQTYVEMQRCFGKIPPGFRRAYSSPLYSDQQNTCGKEPLSANRSDPVFETLRTGVIMANKERKKGQNDKKNPLAAMMDEEPEAMKPGEGKAEGGTSEGNKKTEKSPTDDKSKKTQPGTRGGFPQSHYFVALYRFKALEKDDLDFPPGEKITVVDDSNEEWWRGKIGEKIGYFPPNFIIRVRAGERVHKVTRSFVGNKEIGQITLKKDQIVVQKGEEVNGYVKVYTGRKVGLFPVDFLQEI
SIO_010081: STAC3
subclass of: SO_0000673
so part of: STAC3
location: join(1043905..1043970,1044369..1044627,1044757..1044854,1045206..1045281,1045366..1045460,1045598..1045664,1045919..1045968,1046094..1046197,1046639..1046690,1046911..1047048,1047285..1047383)
location: region:1043905-1047383:1
so has part: feature:1043905-1043970:1:exon
so has part: feature:1044369-1044627:1:exon
so has part: feature:1044757-1044854:1:exon
so has part: feature:1045206-1045281:1:exon
so has part: feature:1045366-1045460:1:exon
so has part: feature:1045598-1045664:1:exon
so has part: feature:1045919-1045968:1:exon
so has part: feature:1046094-1046197:1:exon
so has part: feature:1046639-1046690:1:exon
so has part: feature:1046911-1047048:1:exon
so has part: feature:1047285-1047383:1:exon

XP_008497047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043905-1043970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044369-1044627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044757-1044854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045206-1045281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045366-1045460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045598-1045664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045919-1045968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046094-1046197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046639-1046690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046911-1047048:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1047285-1047383:1:exon

NDUFA4L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NDUFA4L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1059863..1066291
location: region:1059863-1066291:1
so has part: feature:1059863-1066291:1:exon
subclass of: SO_0000010

115600003
type: Gene
SIO_000068: ncbigene

position:1059863:1
position: 1059863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066291:1
position: 1066291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059863-1066291:1:exon

NDUFA4L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NDUFA4L2
product: NDUFA4 mitochondrial complex associated like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030468132.1
SIO_010081: NDUFA4L2
subclass of: SO_0000673
so part of: NDUFA4L2
location: join(1059863..1059994,1063924..1064012,1065759..1065819,1066039..1066291)
location: region:1059863-1066291:1
so has part: feature:1059863-1059994:1:exon
so has part: feature:1063924-1064012:1:exon
so has part: feature:1065759-1065819:1:exon
so has part: feature:1066039-1066291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059863-1059994:1:exon

position:1059994:1
position: 1059994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1063924-1064012:1:exon

position:1063924:1
position: 1063924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064012:1
position: 1064012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1065759-1065819:1:exon

position:1065759:1
position: 1065759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065819:1
position: 1065819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1066039-1066291:1:exon

position:1066039:1
position: 1066039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFA4L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NDUFA4L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2
translation: MKGPLLGPIFSRHVKRHPGLIPLIGFISVGLGSAVLYLLRLALYSPDVSWDRKNNPEPWNKLSPTDQYKFLAVSTDYKSLKKDRPSF
SIO_010081: NDUFA4L2
subclass of: SO_0000673
so part of: NDUFA4L2
location: join(1059938..1059994,1063924..1064012,1065759..1065819,1066039..1066095)
location: region:1059938-1066095:1
so has part: feature:1059938-1059994:1:exon
so has part: feature:1063924-1064012:1:exon
so has part: feature:1065759-1065819:1:exon
so has part: feature:1066039-1066095:1:exon

XP_030323992.1
type: Protein
SIO_000068: ncbiprotein

position:1059938:1
position: 1059938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066095:1
position: 1066095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059938-1059994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063924-1064012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065759-1065819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1066039-1066095:1:exon

SHMT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SHMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1067563..1072984)
location: region:1067563-1072984:-1
so has part: feature:1067563-1072984:-1:exon
subclass of: SO_0000010

103533019
type: Gene
SIO_000068: ncbigene

position:1067563:-1
position: 1067563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072984:-1
position: 1072984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067563-1072984:-1:exon

SHMT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SHMT2
product: serine hydroxymethyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468155.1
SIO_010081: SHMT2
subclass of: SO_0000673
so part of: SHMT2
location: complement(join(1067563..1068001,1068913..1069020,1069279..1069434,1069688..1069787,1069862..1070027,1070211..1070350,1070477..1070599,1070830..1070911,1070995..1071195,1071421..1071500,1071605..1071802,1072841..1072984))
location: region:1067563-1072984:-1
so has part: feature:1072841-1072984:-1:exon
so has part: feature:1071605-1071802:-1:exon
so has part: feature:1071421-1071500:-1:exon
so has part: feature:1070995-1071195:-1:exon
so has part: feature:1070830-1070911:-1:exon
so has part: feature:1070477-1070599:-1:exon
so has part: feature:1070211-1070350:-1:exon
so has part: feature:1069862-1070027:-1:exon
so has part: feature:1069688-1069787:-1:exon
so has part: feature:1069279-1069434:-1:exon
so has part: feature:1068913-1069020:-1:exon
so has part: feature:1067563-1068001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072841-1072984:-1:exon

position:1072841:-1
position: 1072841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071605-1071802:-1:exon

position:1071605:-1
position: 1071605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071802:-1
position: 1071802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1071421-1071500:-1:exon

position:1071421:-1
position: 1071421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071500:-1
position: 1071500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070995-1071195:-1:exon

position:1070995:-1
position: 1070995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071195:-1
position: 1071195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070830-1070911:-1:exon

position:1070830:-1
position: 1070830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070911:-1
position: 1070911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070477-1070599:-1:exon

position:1070477:-1
position: 1070477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070599:-1
position: 1070599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1070211-1070350:-1:exon

position:1070211:-1
position: 1070211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070350:-1
position: 1070350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1069862-1070027:-1:exon

position:1069862:-1
position: 1069862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070027:-1
position: 1070027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1069688-1069787:-1:exon

position:1069688:-1
position: 1069688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069787:-1
position: 1069787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1069279-1069434:-1:exon

position:1069279:-1
position: 1069279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069434:-1
position: 1069434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1068913-1069020:-1:exon

position:1068913:-1
position: 1068913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069020:-1
position: 1069020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1067563-1068001:-1:exon

position:1068001:-1
position: 1068001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHMT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SHMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine hydroxymethyltransferase, mitochondrial
translation: MWPLRLSRALQRCGGQVAISSQRAQHGTATAAATRPVPGWTGQESLAESDPEMWNLVQKEKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRALEAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDIKRISATSIFFESMPYKLNPATGLIDYDQLEVTARLFRPRLIIAGTSAYARLIDYSRMKKVCEEVKAYLLADMAHISGLVAAKVIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKTGKEILYDLEDRINFSVFPALQGGPHNHTIAAVAVALKQASSPAFRQYCQQVLKNAKAMAQALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGAPALTSRHFHEEDFQKVVAFIDEGIALALDVKSKTNKLQDFKTFLLQDLETQQRLADLRQRVETFARAFPMPGFSDH
SIO_010081: SHMT2
subclass of: SO_0000673
so part of: SHMT2
location: complement(join(1067874..1068001,1068913..1069020,1069279..1069434,1069688..1069787,1069862..1070027,1070211..1070350,1070477..1070599,1070830..1070911,1070995..1071195,1071421..1071500,1071605..1071802,1072841..1072864))
location: region:1067874-1072864:-1
so has part: feature:1072841-1072864:-1:exon
so has part: feature:1071605-1071802:-1:exon
so has part: feature:1071421-1071500:-1:exon
so has part: feature:1070995-1071195:-1:exon
so has part: feature:1070830-1070911:-1:exon
so has part: feature:1070477-1070599:-1:exon
so has part: feature:1070211-1070350:-1:exon
so has part: feature:1069862-1070027:-1:exon
so has part: feature:1069688-1069787:-1:exon
so has part: feature:1069279-1069434:-1:exon
so has part: feature:1068913-1069020:-1:exon
so has part: feature:1067874-1068001:-1:exon

XP_030324015.1
type: Protein
SIO_000068: ncbiprotein

position:1067874:-1
position: 1067874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072864:-1
position: 1072864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072841-1072864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071605-1071802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071421-1071500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070995-1071195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070830-1070911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070477-1070599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070211-1070350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069862-1070027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069688-1069787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069279-1069434:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068913-1069020:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1067874-1068001:-1:exon

NXPH4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NXPH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1074000..1087509)
location: region:1074000-1087509:-1
so has part: feature:1074000-1087509:-1:exon
subclass of: SO_0000010

103533021
type: Gene
SIO_000068: ncbigene

position:1074000:-1
position: 1074000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087509:-1
position: 1087509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074000-1087509:-1:exon

NXPH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NXPH4
product: neurexophilin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468127.1
SIO_010081: NXPH4
subclass of: SO_0000673
so part of: NXPH4
location: complement(join(1074000..1074892,1087458..1087509))
location: region:1074000-1087509:-1
so has part: feature:1087458-1087509:-1:exon
so has part: feature:1074000-1074892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087458-1087509:-1:exon

position:1087458:-1
position: 1087458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1074000-1074892:-1:exon

position:1074892:-1
position: 1074892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NXPH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NXPH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-4
translation: MLVCRLPLLGPWLLLLQTLCAGGHITKTLGYLQLGTSGLLKDVPYGTLKPPMFDLGRLIPAEPPRGVGTPSGAAQHPWDWQKNQTAGELLNPRARRKPSLKSARTKKIFGWGDFYFNIKTLKFSLLVTGKIVDHINGTFSVYFRHNSSSLGNVSVSIVPPSKAVGFEMVVPAPPPLPYPPPQQSTLPEGRPAKALNCHVEYEKTNRARKNKPCLYDPSKVCFTEHTQSHAAWLCAKPFKVICIFISFLSIDYKLVQKVCPDYNFQHDNPYFG
SIO_010081: NXPH4
subclass of: SO_0000673
so part of: NXPH4
location: complement(join(1074125..1074892,1087458..1087508))
location: region:1074125-1087508:-1
so has part: feature:1087458-1087508:-1:exon
so has part: feature:1074125-1074892:-1:exon

XP_030323987.1
type: Protein
SIO_000068: ncbiprotein

position:1074125:-1
position: 1074125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087508:-1
position: 1087508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087458-1087508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074125-1074892:-1:exon

LRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1090799..1165853)
location: region:1090799-1165853:-1
so has part: feature:1090799-1165853:-1:exon
subclass of: SO_0000010

103533022
type: Gene
SIO_000068: ncbigene

position:1090799:-1
position: 1090799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165853:-1
position: 1165853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090799-1165853:-1:exon

LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LRP1
product: LDL receptor related protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 16 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030468126.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: complement(join(1090799..1091763,1092377..1092521,1092708..1092795,1093038..1093102,1093267..1093371,1093685..1093859,1094087..1094248,1094333..1094506,1094588..1094728,1094912..1095088,1095459..1095575,1095790..1095896,1096180..1096358,1096459..1096730,1096983..1097102,1097330..1097464,1097559..1097702,1097943..1098065,1098541..1098660,1098916..1099048,1099228..1099334,1101085..1101201,1101473..1101598,1101936..1102058,1102494..1102613,1102706..1102822,1103178..1103271,1103691..1103839,1104007..1104195,1104410..1104615,1104833..1105020,1105107..1105226,1105579..1105664,1105876..1106059,1106307..1106494,1106586..1106726,1107150..1107272,1107522..1107650,1107889..1108005,1108523..1108645,1108849..1108998,1109433..1109546,1110238..1110357,1110810..1110938,1111039..1111164,1111275..1111467,1111676..1111880,1112243..1112432,1113575..1113946,1114223..1114347,1114483..1114634,1114876..1115002,1115517..1115646,1115730..1115864,1115960..1116091,1116989..1117117,1117220..1117360,1117609..1117758,1117992..1118086,1118598..1118772,1118933..1119160,1119260..1119391,1119686..1119930,1120293..1120457,1120567..1120771,1121149..1121346,1121600..1121845,1121930..1122130,1122269..1122451,1122794..1122961,1124969..1125049,1125186..1125302,1125565..1125690,1125944..1126084,1126384..1126509,1126759..1126948,1127156..1127378,1127666..1127846,1128443..1128679,1128951..1129094,1130150..1130339,1130661..1130883,1131464..1131626,1142632..1142895,1143169..1143297,1144182..1144301,1146544..1146681,1151524..1151646,1165750..1165853))
location: region:1090799-1165853:-1
so has part: feature:1165750-1165853:-1:exon
so has part: feature:1151524-1151646:-1:exon
so has part: feature:1146544-1146681:-1:exon
so has part: feature:1144182-1144301:-1:exon
so has part: feature:1143169-1143297:-1:exon
so has part: feature:1142632-1142895:-1:exon
so has part: feature:1131464-1131626:-1:exon
so has part: feature:1130661-1130883:-1:exon
so has part: feature:1130150-1130339:-1:exon
so has part: feature:1128951-1129094:-1:exon
so has part: feature:1128443-1128679:-1:exon
so has part: feature:1127666-1127846:-1:exon
so has part: feature:1127156-1127378:-1:exon
so has part: feature:1126759-1126948:-1:exon
so has part: feature:1126384-1126509:-1:exon
so has part: feature:1125944-1126084:-1:exon
so has part: feature:1125565-1125690:-1:exon
so has part: feature:1125186-1125302:-1:exon
so has part: feature:1124969-1125049:-1:exon
so has part: feature:1122794-1122961:-1:exon
so has part: feature:1122269-1122451:-1:exon
so has part: feature:1121930-1122130:-1:exon
so has part: feature:1121600-1121845:-1:exon
so has part: feature:1121149-1121346:-1:exon
so has part: feature:1120567-1120771:-1:exon
so has part: feature:1120293-1120457:-1:exon
so has part: feature:1119686-1119930:-1:exon
so has part: feature:1119260-1119391:-1:exon
so has part: feature:1118933-1119160:-1:exon
so has part: feature:1118598-1118772:-1:exon
so has part: feature:1117992-1118086:-1:exon
so has part: feature:1117609-1117758:-1:exon
so has part: feature:1117220-1117360:-1:exon
so has part: feature:1116989-1117117:-1:exon
so has part: feature:1115960-1116091:-1:exon
so has part: feature:1115730-1115864:-1:exon
so has part: feature:1115517-1115646:-1:exon
so has part: feature:1114876-1115002:-1:exon
so has part: feature:1114483-1114634:-1:exon
so has part: feature:1114223-1114347:-1:exon
so has part: feature:1113575-1113946:-1:exon
so has part: feature:1112243-1112432:-1:exon
so has part: feature:1111676-1111880:-1:exon
so has part: feature:1111275-1111467:-1:exon
so has part: feature:1111039-1111164:-1:exon
so has part: feature:1110810-1110938:-1:exon
so has part: feature:1110238-1110357:-1:exon
so has part: feature:1109433-1109546:-1:exon
so has part: feature:1108849-1108998:-1:exon
so has part: feature:1108523-1108645:-1:exon
so has part: feature:1107889-1108005:-1:exon
so has part: feature:1107522-1107650:-1:exon
so has part: feature:1107150-1107272:-1:exon
so has part: feature:1106586-1106726:-1:exon
so has part: feature:1106307-1106494:-1:exon
so has part: feature:1105876-1106059:-1:exon
so has part: feature:1105579-1105664:-1:exon
so has part: feature:1105107-1105226:-1:exon
so has part: feature:1104833-1105020:-1:exon
so has part: feature:1104410-1104615:-1:exon
so has part: feature:1104007-1104195:-1:exon
so has part: feature:1103691-1103839:-1:exon
so has part: feature:1103178-1103271:-1:exon
so has part: feature:1102706-1102822:-1:exon
so has part: feature:1102494-1102613:-1:exon
so has part: feature:1101936-1102058:-1:exon
so has part: feature:1101473-1101598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165750-1165853:-1:exon

position:1165750:-1
position: 1165750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151524-1151646:-1:exon

position:1151524:-1
position: 1151524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151646:-1
position: 1151646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146544-1146681:-1:exon

position:1146544:-1
position: 1146544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146681:-1
position: 1146681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1144182-1144301:-1:exon

position:1144182:-1
position: 1144182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144301:-1
position: 1144301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1143169-1143297:-1:exon

position:1143169:-1
position: 1143169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143297:-1
position: 1143297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1142632-1142895:-1:exon

position:1142632:-1
position: 1142632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142895:-1
position: 1142895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131464-1131626:-1:exon

position:1131464:-1
position: 1131464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131626:-1
position: 1131626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130661-1130883:-1:exon

position:1130661:-1
position: 1130661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130883:-1
position: 1130883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130150-1130339:-1:exon

position:1130150:-1
position: 1130150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130339:-1
position: 1130339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1128951-1129094:-1:exon

position:1128951:-1
position: 1128951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129094:-1
position: 1129094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1128443-1128679:-1:exon

position:1128443:-1
position: 1128443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128679:-1
position: 1128679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1127666-1127846:-1:exon

position:1127666:-1
position: 1127666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127846:-1
position: 1127846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1127156-1127378:-1:exon

position:1127156:-1
position: 1127156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127378:-1
position: 1127378
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LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LRP1
product: LDL receptor related protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 19 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030468125.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
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position:1108511:-1
position: 1108511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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LRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolow-density lipoprotein receptor-related protein 1 isoform X2
translation: MGPLLALAGSLLALLAAPAARALEAPKTCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELCIHMSKLCNGIHDCFDGSDEGPHCREQLSNCTALACQHHCVPTLNGPVCYCNNSFQLAEDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGAPVPNITPTSAKQTTAMDFNYIEDTVCWVHVGDSASQTILKCAKIPNLKGFVEERSINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGVTCVTLLDLELYNPKGIALDPTMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPTVRSHACEPDQFGKPGGCSDICLLGNSHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSKRGKIERAWMDGSNRNIFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVYEGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQASKVVSLLRNERPPIFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLATPRGRQCACAEDQILGVDTVTCKANPSYIPPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRWLCDGDNDCGNNEDESNSTCSARTCSPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDCMDSSDEKNCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCESLVCKPPSHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCDQCSLNNGGCSHNCTVAPGEGIICSCPLGMELGSDNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIYSALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPLAPNPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDKTTCYEFKKFLLYARQMEIRGVDIDNPYYNYIISFTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLSVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLQGKLYWTDGDNISVANMDGSNRTLLFTNQKGPVGLAIDYPESKLYWISSGNGTINRCNLDGSNLEVIESLKSQLSKATALAIMGNKLWWADQASERMGTCNKKDGTEVTVLRNSTTLVMHMKVYDESIQQAGTNPCSLNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVIS…
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: complement(join(1091623..1091763,1092377..1092521,1092708..1092795,1093038..1093102,1093267..1093371,1093685..1093859,1094087..1094248,1094333..1094506,1094588..1094728,1094912..1095088,1095459..1095575,1095790..1095896,1096180..1096358,1096459..1096730,1096983..1097102,1097330..1097464,1097559..1097702,1097943..1098065,1098541..1098660,1098916..1099048,1099228..1099334,1101085..1101201,1101473..1101598,1101936..1102058,1102494..1102613,1102706..1102822,1103178..1103271,1103691..1103839,1104007..1104195,1104410..1104615,1104833..1105020,1105107..1105226,1105579..1105664,1105876..1106059,1106307..1106494,1106586..1106726,1107150..1107272,1107522..1107650,1107889..1108005,1108523..1108645,1108849..1108998,1109433..1109546,1110238..1110357,1110810..1110938,1111039..1111164,1111275..1111467,1111676..1111880,1112243..1112432,1113575..1113946,1114223..1114347,1114483..1114634,1114876..1115002,1115517..1115646,1115730..1115864,1115960..1116091,1116989..1117117,1117220..1117360,1117609..1117758,1117992..1118086,1118598..1118772,1118933..1119160,1119260..1119391,1119686..1119930,1120293..1120457,1120567..1120771,1121149..1121346,1121600..1121845,1121930..1122130,1122269..1122451,1122794..1122961,1124969..1125049,1125186..1125302,1125565..1125690,1125944..1126084,1126384..1126509,1126759..1126948,1127156..1127378,1127666..1127846,1128443..1128679,1128951..1129094,1130150..1130339,1130661..1130883,1131464..1131626,1142632..1142895,1143169..1143297,1144182..1144301,1146544..1146681,1151524..1151646,1165750..1165822))
location: region:1091623-1165822:-1
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so has part: feature:1114483-1114634:-1:exon
so has part: feature:1114223-1114347:-1:exon
so has part: feature:1113575-1113946:-1:exon
so has part: feature:1112243-1112432:-1:exon
so has part: feature:1111676-1111880:-1:exon
so has part: feature:1111275-1111467:-1:exon
so has part: feature:1111039-1111164:-1:exon
so has part: feature:1110810-1110938:-1:exon
so has part: feature:1110238-1110357:-1:exon
so has part: feature:1109433-1109546:-1:exon
so has part: feature:1108849-1108998:-1:exon
so has part: feature:1108523-1108645:-1:exon
so has part: feature:1107889-1108005:-1:exon
so has part: feature:1107522-1107650:-1:exon
so has part: feature:1107150-1107272:-1:exon
so has part: feature:1106586-1106726:-1:exon
so has part: feature:1106307-1106494:-1:exon
so has part: feature:1105876-1106059:-1:exon
so has part: feature:1105579-1105664:-1:exon
so has part: feature:1105107-1105226:-1:exon
so has part: feature:1104833-1105020:-1:exon
so has part: feature:1104410-1104615:-1:exon
so has part: feature:1104007-1104195:-1:exon
so has part: feature:1103691-1103839:-1:exon
so has part: feature:1103178-1103271:-1:exon
so has part: feature:1102706-1102822:-1:exon
so has part: feature:1102494-1102613:-1:exon
so has part: feature:1101936-1102058:-1:exon

XP_030323986.1
type: Protein
SIO_000068: ncbiprotein

position:1091623:-1
position: 1091623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165822:-1
position: 1165822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165750-1165822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151524-1151646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146544-1146681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144182-1144301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143169-1143297:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1142632-1142895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131464-1131626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130661-1130883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130150-1130339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128951-1129094:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128443-1128679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127666-1127846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127156-1127378:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1126759-1126948:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1126384-1126509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1125944-1126084:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1125565-1125690:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1125186-1125302:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1124969-1125049:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1122794-1122961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1122269-1122451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1121930-1122130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1121600-1121845:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1121149-1121346:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1120567-1120771:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1120293-1120457:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119686-1119930:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1119260-1119391:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1118933-1119160:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1118598-1118772:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1117992-1118086:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1117609-1117758:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1117220-1117360:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1116989-1117117:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1115960-1116091:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1115730-1115864:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1115517-1115646:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1114876-1115002:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1114483-1114634:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1114223-1114347:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1113575-1113946:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1112243-1112432:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1111676-1111880:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1111275-1111467:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1111039-1111164:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1110810-1110938:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1110238-1110357:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1109433-1109546:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1108849-1108998:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1108523-1108645:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1107889-1108005:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1107522-1107650:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1107150-1107272:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1106586-1106726:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1106307-1106494:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1105876-1106059:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1105579-1105664:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1105107-1105226:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1104833-1105020:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1104410-1104615:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1104007-1104195:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1103691-1103839:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1103178-1103271:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1102706-1102822:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1102494-1102613:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1101936-1102058:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1101473-1101598:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1101085-1101201:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1099228-1099334:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1098916-1099048:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1098541-1098660:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1097943-1098065:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1097559-1097702:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1097330-1097464:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1096983-1097102:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1096459-1096730:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1096180-1096358:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1095790-1095896:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1095459-1095575:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1094912-1095088:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1094588-1094728:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1094333-1094506:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1094087-1094248:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1093685-1093859:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1093267-1093371:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:1093038-1093102:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:1092708-1092795:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:1092377-1092521:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:1091623-1091763:-1:exon

LRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolow-density lipoprotein receptor-related protein 1 isoform X1
translation: MGPLLALAGSLLALLAAPAARALEAPKTCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELCIHMSKLCNGIHDCFDGSDEGPHCREQLSNCTALACQHHCVPTLNGPVCYCNNSFQLAEDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGAPVPNITPTSAKQTTAMDFNYIEDTVCWVHVGDSASQTILKCAKIPNLKGFVEERSINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGVTCVTLLDLELYNPKGIALDPTMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPTVRSHACEPDQFGKPGGCSDICLLGNSHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSKRGKIERAWMDGSNRNIFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVYEGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQASKVVSLLRNERPPIFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLATPRGRQCACAEDQILGVDTVTCKANPSYIPPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRWLCDGDNDCGNNEDESNSTCSARTCSPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDCMDSSDEKNCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCESLVCKPPSHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCDQCSLNNGGCSHNCTVAPGEGIICSCPLGMELGSDNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIYSALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPLAPNPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDKTTCYEFKKFLLYARQMEIRGVDIDNPYYNYIISFTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLSVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLQGKLYWTDGDNISVANMDGSNRTLLFTNQKGPVGLAIDYPESKLYWISSGNGTINRCNLDGSNLEVIESLKSQLSKATALAIMGNKLWWADQASERMGTCNKKDGTEVTVLRNSTTLVMHMKVYDESIQQAGTNPCSLNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVIS…
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: complement(join(1091623..1091763,1092377..1092521,1092708..1092795,1093038..1093102,1093267..1093371,1093685..1093859,1094087..1094248,1094333..1094506,1094588..1094728,1094912..1095088,1095459..1095575,1095790..1095896,1096180..1096358,1096459..1096730,1096983..1097102,1097330..1097464,1097559..1097702,1097943..1098065,1098541..1098660,1098916..1099048,1099228..1099334,1101085..1101201,1101473..1101598,1101936..1102058,1102494..1102613,1102706..1102822,1103178..1103271,1103691..1103839,1104007..1104195,1104410..1104615,1104833..1105020,1105107..1105226,1105579..1105664,1105876..1106059,1106307..1106494,1106586..1106726,1107150..1107272,1107522..1107650,1107889..1108005,1108511..1108645,1108849..1108998,1109433..1109546,1110238..1110357,1110810..1110938,1111039..1111164,1111275..1111467,1111676..1111880,1112243..1112432,1113575..1113946,1114223..1114347,1114483..1114634,1114876..1115002,1115517..1115646,1115730..1115864,1115960..1116091,1116989..1117117,1117220..1117360,1117609..1117758,1117992..1118086,1118598..1118772,1118933..1119160,1119260..1119391,1119686..1119930,1120293..1120457,1120567..1120771,1121149..1121346,1121600..1121845,1121930..1122130,1122269..1122451,1122794..1122961,1124969..1125049,1125186..1125302,1125565..1125690,1125944..1126084,1126384..1126509,1126759..1126948,1127156..1127378,1127666..1127846,1128443..1128679,1128951..1129094,1130150..1130339,1130661..1130883,1131464..1131626,1142632..1142895,1143169..1143297,1144182..1144301,1146544..1146681,1151524..1151646,1165750..1165822))
location: region:1091623-1165822:-1
so has part: feature:1165750-1165822:-1:exon
so has part: feature:1151524-1151646:-1:exon
so has part: feature:1146544-1146681:-1:exon
so has part: feature:1144182-1144301:-1:exon
so has part: feature:1143169-1143297:-1:exon
so has part: feature:1142632-1142895:-1:exon
so has part: feature:1131464-1131626:-1:exon
so has part: feature:1130661-1130883:-1:exon
so has part: feature:1130150-1130339:-1:exon
so has part: feature:1128951-1129094:-1:exon
so has part: feature:1128443-1128679:-1:exon
so has part: feature:1127666-1127846:-1:exon
so has part: feature:1127156-1127378:-1:exon
so has part: feature:1126759-1126948:-1:exon
so has part: feature:1126384-1126509:-1:exon
so has part: feature:1125944-1126084:-1:exon
so has part: feature:1125565-1125690:-1:exon
so has part: feature:1125186-1125302:-1:exon
so has part: feature:1124969-1125049:-1:exon
so has part: feature:1122794-1122961:-1:exon
so has part: feature:1122269-1122451:-1:exon
so has part: feature:1121930-1122130:-1:exon
so has part: feature:1121600-1121845:-1:exon
so has part: feature:1121149-1121346:-1:exon
so has part: feature:1120567-1120771:-1:exon
so has part: feature:1120293-1120457:-1:exon
so has part: feature:1119686-1119930:-1:exon
so has part: feature:1119260-1119391:-1:exon
so has part: feature:1118933-1119160:-1:exon
so has part: feature:1118598-1118772:-1:exon
so has part: feature:1117992-1118086:-1:exon
so has part: feature:1117609-1117758:-1:exon
so has part: feature:1117220-1117360:-1:exon
so has part: feature:1116989-1117117:-1:exon
so has part: feature:1115960-1116091:-1:exon
so has part: feature:1115730-1115864:-1:exon
so has part: feature:1115517-1115646:-1:exon
so has part: feature:1114876-1115002:-1:exon
so has part: feature:1114483-1114634:-1:exon
so has part: feature:1114223-1114347:-1:exon
so has part: feature:1113575-1113946:-1:exon
so has part: feature:1112243-1112432:-1:exon
so has part: feature:1111676-1111880:-1:exon
so has part: feature:1111275-1111467:-1:exon
so has part: feature:1111039-1111164:-1:exon
so has part: feature:1110810-1110938:-1:exon
so has part: feature:1110238-1110357:-1:exon
so has part: feature:1109433-1109546:-1:exon
so has part: feature:1108849-1108998:-1:exon
so has part: feature:1108511-1108645:-1:exon
so has part: feature:1107889-1108005:-1:exon
so has part: feature:1107522-1107650:-1:exon
so has part: feature:1107150-1107272:-1:exon
so has part: feature:1106586-1106726:-1:exon
so has part: feature:1106307-1106494:-1:exon
so has part: feature:1105876-1106059:-1:exon
so has part: feature:1105579-1105664:-1:exon
so has part: feature:1105107-1105226:-1:exon
so has part: feature:1104833-1105020:-1:exon
so has part: feature:1104410-1104615:-1:exon
so has part: feature:1104007-1104195:-1:exon
so has part: feature:1103691-1103839:-1:exon
so has part: feature:1103178-1103271:-1:exon
so has part: feature:1102706-1102822:-1:exon
so has part: feature:1102494-1102613:-1:exon
so has part: feature:1101936-1102058:-1:exon

XP_030323985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1165750-1165822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151524-1151646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146544-1146681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144182-1144301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143169-1143297:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1142632-1142895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131464-1131626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130661-1130883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130150-1130339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128951-1129094:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128443-1128679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127666-1127846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127156-1127378:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1126759-1126948:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1126384-1126509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1125944-1126084:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1125565-1125690:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1125186-1125302:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1124969-1125049:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1122794-1122961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1122269-1122451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1121930-1122130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1121600-1121845:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1121149-1121346:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1120567-1120771:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1120293-1120457:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119686-1119930:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1119260-1119391:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1118933-1119160:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1118598-1118772:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1117992-1118086:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1117609-1117758:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1117220-1117360:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1116989-1117117:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1115960-1116091:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1115730-1115864:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1115517-1115646:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1114876-1115002:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1114483-1114634:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1114223-1114347:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1113575-1113946:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1112243-1112432:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1111676-1111880:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1111275-1111467:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1111039-1111164:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1110810-1110938:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1110238-1110357:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1109433-1109546:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1108849-1108998:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1108511-1108645:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1107889-1108005:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1107522-1107650:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1107150-1107272:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1106586-1106726:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1106307-1106494:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1105876-1106059:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1105579-1105664:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1105107-1105226:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1104833-1105020:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1104410-1104615:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1104007-1104195:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1103691-1103839:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1103178-1103271:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1102706-1102822:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1102494-1102613:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1101936-1102058:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1101473-1101598:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1101085-1101201:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1099228-1099334:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1098916-1099048:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1098541-1098660:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1097943-1098065:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1097559-1097702:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1097330-1097464:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1096983-1097102:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1096459-1096730:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1096180-1096358:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1095790-1095896:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1095459-1095575:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1094912-1095088:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1094588-1094728:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1094333-1094506:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1094087-1094248:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1093685-1093859:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1093267-1093371:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:1093038-1093102:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:1092708-1092795:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:1092377-1092521:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:1091623-1091763:-1:exon

STAT6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1168510..1178236
location: region:1168510-1178236:1
so has part: feature:1168510-1178236:1:exon
subclass of: SO_0000010

103533023
type: Gene
SIO_000068: ncbigene

position:1168510:1
position: 1168510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178236:1
position: 1178236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168510-1178236:1:exon

STAT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAT6
product: signal transducer and activator of transcription 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 6 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468233.1
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: join(1168510..1168619,1171437..1171567,1171735..1171873,1173382..1173465,1173553..1173670,1173788..1173849,1173978..1174126,1174253..1174384,1174495..1174683,1174765..1174852,1174984..1175104,1175213..1175310,1175474..1175687,1175767..1175887,1175963..1176099,1176204..1176350,1176551..1176620,1176832..1176960,1177056..1177154,1177249..1177332,1177557..1177715,1177786..1178236)
location: region:1168510-1178236:1
so has part: feature:1168510-1168619:1:exon
so has part: feature:1171437-1171567:1:exon
so has part: feature:1171735-1171873:1:exon
so has part: feature:1173382-1173465:1:exon
so has part: feature:1173553-1173670:1:exon
so has part: feature:1173788-1173849:1:exon
so has part: feature:1173978-1174126:1:exon
so has part: feature:1174253-1174384:1:exon
so has part: feature:1174495-1174683:1:exon
so has part: feature:1174765-1174852:1:exon
so has part: feature:1174984-1175104:1:exon
so has part: feature:1175213-1175310:1:exon
so has part: feature:1175474-1175687:1:exon
so has part: feature:1175767-1175887:1:exon
so has part: feature:1175963-1176099:1:exon
so has part: feature:1176204-1176350:1:exon
so has part: feature:1176551-1176620:1:exon
so has part: feature:1176832-1176960:1:exon
so has part: feature:1177056-1177154:1:exon
so has part: feature:1177249-1177332:1:exon
so has part: feature:1177557-1177715:1:exon
so has part: feature:1177786-1178236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1168510-1168619:1:exon

position:1168619:1
position: 1168619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171437-1171567:1:exon

position:1171437:1
position: 1171437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171567:1
position: 1171567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1171735-1171873:1:exon

position:1171735:1
position: 1171735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171873:1
position: 1171873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1173382-1173465:1:exon

position:1173382:1
position: 1173382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173465:1
position: 1173465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173553-1173670:1:exon

position:1173553:1
position: 1173553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173670:1
position: 1173670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1173788-1173849:1:exon

position:1173788:1
position: 1173788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173849:1
position: 1173849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1173978-1174126:1:exon

position:1173978:1
position: 1173978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174126:1
position: 1174126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1174253-1174384:1:exon

position:1174253:1
position: 1174253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174384:1
position: 1174384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1174495-1174683:1:exon

position:1174495:1
position: 1174495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174683:1
position: 1174683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1174765-1174852:1:exon

position:1174765:1
position: 1174765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174852:1
position: 1174852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1174984-1175104:1:exon

position:1174984:1
position: 1174984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175104:1
position: 1175104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1175213-1175310:1:exon

position:1175213:1
position: 1175213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175310:1
position: 1175310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1175474-1175687:1:exon

position:1175474:1
position: 1175474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175687:1
position: 1175687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1175767-1175887:1:exon

position:1175767:1
position: 1175767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175887:1
position: 1175887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1175963-1176099:1:exon

position:1175963:1
position: 1175963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176099:1
position: 1176099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1176204-1176350:1:exon

position:1176204:1
position: 1176204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176350:1
position: 1176350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1176551-1176620:1:exon

position:1176551:1
position: 1176551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176620:1
position: 1176620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1176832-1176960:1:exon

position:1176832:1
position: 1176832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176960:1
position: 1176960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1177056-1177154:1:exon

position:1177056:1
position: 1177056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177154:1
position: 1177154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1177249-1177332:1:exon

position:1177249:1
position: 1177249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177332:1
position: 1177332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1177557-1177715:1:exon

position:1177557:1
position: 1177557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177715:1
position: 1177715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1177786-1178236:1:exon

position:1177786:1
position: 1177786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STAT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAT6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 6 bases in 4 codons; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1175067..1175069,aa:OTHER)
transl except: (pos:1175515..1175517,aa:OTHER)
transl except: (pos:1175527..1175529,aa:OTHER)
product: LOW QUALITY PROTEIN: signal transducer and activator of transcription 6
translation: MSLWSIVSHMPPEEFSGLFTNFPHSLRCLLADWLENQPWEFINGSDAFFTSVASKMLSAMLEKLHSAASSDGQQCQILQQVSSIEKTYQQDPLRLVAVLRAILEGEKAAVIKRDRHLPLSFHRRQEELKFSLGLQRLQHRVREIQALRDGPAAALLLNPRDPQLKAETKPPESELPTLILEAVKELEAAKQQVLKRIQIWKRQQQLAGNGAVFEESLAPLQKRCESLVEVHFQLQQQVMAASAELGPELLPRLLERFNEVLSSLVKSSFLVEKQPPQVLKTQTKFQASVRFLLGPQLLKVSPKPYMVRADMVTEKQARELTLSTYSNTLSESTGEIMHNVVALETNPTSGTCCANFKNVLLKNQTLRAKGSESVTREKCAVLFSTTXPLTPGNLSVHSRVLSLPIVVIVHGNQDNNAKATVLWDNAFSETVRPSGRFVVAEQVPWXEDVXHAETFKFMAEVQTTKGLLKEHYFFLAQKIFNDNSARFEDFQNRQVSWAQFNKEILPGRGFTFWQWFDGSLTSPKRMPQNYWSDRVGAQEPNRLISGFISKQYVCKLLSTEPDGTFLLRFSDSEIGGVTIAHVIRGKDGSSQVENIQPFSAKDLSIRSLGDRIRDLGQLRNLYPNIPKDQAFGSHYNKEQTGKDVRGYVSAAIKMTVESERDQQPLTTAGGTPEAPPAHMFGQPMLQPNLQHLDNRHSVLNPVCPPAPFCPQPIPTGYPTGESNMMVPDNIRPSFPSTSPMLSLSLVTDPALPPCSDLPAFRNPLPFMPNQYMPGEAPQLLSGGPLPEPQDEEMPETMAEPALFPSIVDPLLQSSQRWMPPSSLELPPGSDFDQFLEMTLEAPALCPPFTPPQQHSGYPSPNPSCWGMGESRWDDSVRPGHA
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: join(1171452..1171567,1171735..1171873,1173382..1173465,1173553..1173670,1173788..1173849,1173978..1174126,1174253..1174384,1174495..1174683,1174765..1174852,1174984..1175104,1175213..1175310,1175474..1175687,1175767..1175887,1175963..1176099,1176204..1176350,1176551..1176620,1176832..1176960,1177056..1177154,1177249..1177332,1177557..1177715,1177786..1177981)
location: region:1171452-1177981:1
so has part: feature:1171452-1171567:1:exon
so has part: feature:1171735-1171873:1:exon
so has part: feature:1173382-1173465:1:exon
so has part: feature:1173553-1173670:1:exon
so has part: feature:1173788-1173849:1:exon
so has part: feature:1173978-1174126:1:exon
so has part: feature:1174253-1174384:1:exon
so has part: feature:1174495-1174683:1:exon
so has part: feature:1174765-1174852:1:exon
so has part: feature:1174984-1175104:1:exon
so has part: feature:1175213-1175310:1:exon
so has part: feature:1175474-1175687:1:exon
so has part: feature:1175767-1175887:1:exon
so has part: feature:1175963-1176099:1:exon
so has part: feature:1176204-1176350:1:exon
so has part: feature:1176551-1176620:1:exon
so has part: feature:1176832-1176960:1:exon
so has part: feature:1177056-1177154:1:exon
so has part: feature:1177249-1177332:1:exon
so has part: feature:1177557-1177715:1:exon
so has part: feature:1177786-1177981:1:exon

XP_030324093.1
type: Protein
SIO_000068: ncbiprotein

position:1171452:1
position: 1171452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177981:1
position: 1177981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171452-1171567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171735-1171873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173382-1173465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173553-1173670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173788-1173849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173978-1174126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174253-1174384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174495-1174683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174765-1174852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174984-1175104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1175213-1175310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175474-1175687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175767-1175887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175963-1176099:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176204-1176350:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1176551-1176620:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176832-1176960:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1177056-1177154:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1177249-1177332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1177557-1177715:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1177786-1177981:1:exon

NAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1178542..1182481)
location: region:1178542-1182481:-1
so has part: feature:1178542-1182481:-1:exon
subclass of: SO_0000010

103533024
type: Gene
SIO_000068: ncbigene

position:1178542:-1
position: 1178542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182481:-1
position: 1182481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178542-1182481:-1:exon

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NAB2
product: NGFI-A binding protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468234.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: complement(join(1178542..1179605,1179696..1179899,1180000..1180131,1180351..1180402,1180835..1180968,1181211..1182015,1182471..1182481))
location: region:1178542-1182481:-1
so has part: feature:1182471-1182481:-1:exon
so has part: feature:1181211-1182015:-1:exon
so has part: feature:1180835-1180968:-1:exon
so has part: feature:1180351-1180402:-1:exon
so has part: feature:1180000-1180131:-1:exon
so has part: feature:1179696-1179899:-1:exon
so has part: feature:1178542-1179605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1182471-1182481:-1:exon

position:1182471:-1
position: 1182471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181211-1182015:-1:exon

position:1181211:-1
position: 1181211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182015:-1
position: 1182015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180835-1180968:-1:exon

position:1180835:-1
position: 1180835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180968:-1
position: 1180968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1180351-1180402:-1:exon

position:1180351:-1
position: 1180351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180402:-1
position: 1180402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1180000-1180131:-1:exon

position:1180000:-1
position: 1180000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180131:-1
position: 1180131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1179696-1179899:-1:exon

position:1179696:-1
position: 1179696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179899:-1
position: 1179899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1178542-1179605:-1:exon

position:1179605:-1
position: 1179605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NAB2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: NGFI-A-binding protein 2
translation: MALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHTSPGEATGKGSSGAGTPPAHSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSGGEQPVGTEVLEPELVRTVVESVERLLQSCPRGGEAELRALMKLNKKLSKSVGHIFQLEDGDRHKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVTRAHPEETGATVAKRLKQEVGEQSRPELLPLPGGLEPPGATFRASLEEDAASLSGESLDGHLQGGGAVPGLTPPPGVAPDVPLGVPPHGLWSRHILQQTLMDEGLRXARLVSHDRVGAAAPCLPGKPPGPEFEDGLAERGAPAPPEPPRGTIKWSRETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: complement(join(1179511..1179605,1179696..1179899,1180000..1180131,1180351..1180402,1180835..1180968,1181211..1182008))
location: region:1179511-1182008:-1
so has part: feature:1181211-1182008:-1:exon
so has part: feature:1180835-1180968:-1:exon
so has part: feature:1180351-1180402:-1:exon
so has part: feature:1180000-1180131:-1:exon
so has part: feature:1179696-1179899:-1:exon
so has part: feature:1179511-1179605:-1:exon

XP_030324094.1
type: Protein
SIO_000068: ncbiprotein

position:1179511:-1
position: 1179511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182008:-1
position: 1182008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181211-1182008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180835-1180968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180351-1180402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1180000-1180131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179696-1179899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179511-1179605:-1:exon

NEMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1183106..1189462
location: region:1183106-1189462:1
so has part: feature:1183106-1189462:1:exon
subclass of: SO_0000010

103533025
type: Gene
SIO_000068: ncbigene

position:1183106:1
position: 1183106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189462:1
position: 1189462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183106-1189462:1:exon

NEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NEMP1
product: nuclear envelope integral membrane protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468221.1
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1183106..1183396,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188223..1188378,1188591..1189425)
location: region:1183106-1189425:1
so has part: feature:1183106-1183396:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188223-1188378:1:exon
so has part: feature:1188591-1189425:1:exon

position:1189425:1
position: 1189425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183106-1183396:1:exon

position:1183396:1
position: 1183396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

position:1185593:1
position: 1185593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185714:1
position: 1185714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

position:1185809:1
position: 1185809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186019:1
position: 1186019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

position:1186145:1
position: 1186145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186217:1
position: 1186217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

position:1186342:1
position: 1186342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186435:1
position: 1186435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

position:1186618:1
position: 1186618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186732:1
position: 1186732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

position:1186900:1
position: 1186900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187125:1
position: 1187125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

position:1187380:1
position: 1187380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187553:1
position: 1187553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

position:1187832:1
position: 1187832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188037:1
position: 1188037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1188223-1188378:1:exon

position:1188223:1
position: 1188223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188378:1
position: 1188378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1188591-1189425:1:exon

position:1188591:1
position: 1188591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NEMP1
product: nuclear envelope integral membrane protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468222.1
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1183106..1183396,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188591..1189425)
location: region:1183106-1189425:1
so has part: feature:1183106-1183396:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188591-1189425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183106-1183396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188591-1189425:1:exon

NEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope integral membrane protein 1 isoform X2
translation: MLPGTAVFVSLALPGKTPPYTLPGCRSPLAEGWHSRLSPVITGRHGLPSIGFRVNTPTARSRGTETRRTRFIDAKESVTQLLEGHVYQRSDTHHFCYTNTRVPQWHEIWTRMQIRVNSSRMIRVTQVDSEEKLEGFGIWDFVSSLLKEKLNDTSIDVDLYSNKTCLKVELLEDGTTYCVVLFRRFDPKLFLVFFLGLLLFFCGDVLSRSQLFYYSAGISFGLLASLLILVYMMSKVMPKRSPVYFLLVGGWSFSLYLLQLIFKNLREICKSHWQYVLGYLLLVGFVSFGVCYRYGPLENERSINLLSWALQLLGLLLMYSGIQIHPFALALVVIAICTKNLDYPLQWTFAAYRRIQSARQRPSPPRLLTEEEYRVQGEVETRKALEELRDYCRSPDFSAWTAVSRIQSPKRFADFVGGSCHVTPSEISAHDQEYGLGVIFLEDQFEEEEEEEEEENENELLDRNHKSYSLIYNHLDAHGDA
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1183180..1183396,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188591..1188598)
location: region:1183180-1188598:1
so has part: feature:1183180-1183396:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188591-1188598:1:exon

XP_030324082.1
type: Protein
SIO_000068: ncbiprotein

position:1183180:1
position: 1183180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188598:1
position: 1188598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183180-1183396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188591-1188598:1:exon

NEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope integral membrane protein 1 isoform X1
translation: MLPGTAVFVSLALPGKTPPYTLPGCRSPLAEGWHSRLSPVITGRHGLPSIGFRVNTPTARSRGTETRRTRFIDAKESVTQLLEGHVYQRSDTHHFCYTNTRVPQWHEIWTRMQIRVNSSRMIRVTQVDSEEKLEGFGIWDFVSSLLKEKLNDTSIDVDLYSNKTCLKVELLEDGTTYCVVLFRRFDPKLFLVFFLGLLLFFCGDVLSRSQLFYYSAGISFGLLASLLILVYMMSKVMPKRSPVYFLLVGGWSFSLYLLQLIFKNLREICKSHWQYVLGYLLLVGFVSFGVCYRYGPLENERSINLLSWALQLLGLLLMYSGIQIHPFALALVVIAICTKNLDYPLQWTFAAYRRIQSARQRPSPPRLLTEEEYRVQGEVETRKALEELRDYCRSPDFSAWTAVSRIQSPKRFADFVGGSCHVTPSEISAHDQEYGLGVIFLEDQFEEEEEEEEEENENELLDRNHKSYSLIYNHLDAHGGSSC
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1183180..1183396,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188223..1188236)
location: region:1183180-1188236:1
so has part: feature:1183180-1183396:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188223-1188236:1:exon

XP_030324081.1
type: Protein
SIO_000068: ncbiprotein

position:1188236:1
position: 1188236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183180-1183396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188223-1188236:1:exon

NEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NEMP1
product: nuclear envelope integral membrane protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468223.1
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1184730..1184819,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188591..1189462)
location: region:1184730-1189462:1
so has part: feature:1184730-1184819:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188591-1189462:1:exon

position:1184730:1
position: 1184730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184730-1184819:1:exon

position:1184819:1
position: 1184819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188591-1189462:1:exon

NEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope integral membrane protein 1 isoform X3
translation: MKAAPGRRGLLAVLLLLLPPPLWGADAKESVTQLLEGHVYQRSDTHHFCYTNTRVPQWHEIWTRMQIRVNSSRMIRVTQVDSEEKLEGFGIWDFVSSLLKEKLNDTSIDVDLYSNKTCLKVELLEDGTTYCVVLFRRFDPKLFLVFFLGLLLFFCGDVLSRSQLFYYSAGISFGLLASLLILVYMMSKVMPKRSPVYFLLVGGWSFSLYLLQLIFKNLREICKSHWQYVLGYLLLVGFVSFGVCYRYGPLENERSINLLSWALQLLGLLLMYSGIQIHPFALALVVIAICTKNLDYPLQWTFAAYRRIQSARQRPSPPRLLTEEEYRVQGEVETRKALEELRDYCRSPDFSAWTAVSRIQSPKRFADFVGGSCHVTPSEISAHDQEYGLGVIFLEDQFEEEEEEEEEENENELLDRNHKSYSLIYNHLDAHGDA
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: join(1184744..1184819,1185593..1185714,1185809..1186019,1186145..1186217,1186342..1186435,1186618..1186732,1186900..1187125,1187380..1187553,1187832..1188037,1188591..1188598)
location: region:1184744-1188598:1
so has part: feature:1184744-1184819:1:exon
so has part: feature:1185593-1185714:1:exon
so has part: feature:1185809-1186019:1:exon
so has part: feature:1186145-1186217:1:exon
so has part: feature:1186342-1186435:1:exon
so has part: feature:1186618-1186732:1:exon
so has part: feature:1186900-1187125:1:exon
so has part: feature:1187380-1187553:1:exon
so has part: feature:1187832-1188037:1:exon
so has part: feature:1188591-1188598:1:exon

XP_030324083.1
type: Protein
SIO_000068: ncbiprotein

position:1184744:1
position: 1184744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184744-1184819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185593-1185714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185809-1186019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186145-1186217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186342-1186435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186618-1186732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186900-1187125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187380-1187553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1187832-1188037:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188591-1188598:1:exon

MYO1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1189850..1198142
location: region:1189850-1198142:1
so has part: feature:1189850-1198142:1:exon
subclass of: SO_0000010

103533026
type: Gene
SIO_000068: ncbigene

position:1189850:1
position: 1189850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198142:1
position: 1198142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189850-1198142:1:exon

MYO1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYO1A
product: myosin IA
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468219.1
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: join(1189850..1190054,1191161..1191304,1191451..1191566,1191762..1191856,1191958..1192062,1192155..1192201,1192362..1192425,1192496..1192594,1192675..1192778,1192861..1193008,1193110..1193228,1193312..1193398,1193479..1193544,1193655..1193759,1194065..1194127,1194245..1194445,1194617..1194843,1194918..1195118,1195205..1195298,1195528..1195677,1195766..1195834,1196090..1196176,1196438..1196512,1196621..1196756,1196870..1196976,1197070..1197202,1197280..1197432,1197503..1197630,1197929..1198142)
location: region:1189850-1198142:1
so has part: feature:1189850-1190054:1:exon
so has part: feature:1191161-1191304:1:exon
so has part: feature:1191451-1191566:1:exon
so has part: feature:1191762-1191856:1:exon
so has part: feature:1191958-1192062:1:exon
so has part: feature:1192155-1192201:1:exon
so has part: feature:1192362-1192425:1:exon
so has part: feature:1192496-1192594:1:exon
so has part: feature:1192675-1192778:1:exon
so has part: feature:1192861-1193008:1:exon
so has part: feature:1193110-1193228:1:exon
so has part: feature:1193312-1193398:1:exon
so has part: feature:1193479-1193544:1:exon
so has part: feature:1193655-1193759:1:exon
so has part: feature:1194065-1194127:1:exon
so has part: feature:1194245-1194445:1:exon
so has part: feature:1194617-1194843:1:exon
so has part: feature:1194918-1195118:1:exon
so has part: feature:1195205-1195298:1:exon
so has part: feature:1195528-1195677:1:exon
so has part: feature:1195766-1195834:1:exon
so has part: feature:1196090-1196176:1:exon
so has part: feature:1196438-1196512:1:exon
so has part: feature:1196621-1196756:1:exon
so has part: feature:1196870-1196976:1:exon
so has part: feature:1197070-1197202:1:exon
so has part: feature:1197280-1197432:1:exon
so has part: feature:1197503-1197630:1:exon
so has part: feature:1197929-1198142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1189850-1190054:1:exon

position:1190054:1
position: 1190054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1191161-1191304:1:exon

position:1191161:1
position: 1191161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191304:1
position: 1191304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1191451-1191566:1:exon

position:1191451:1
position: 1191451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191566:1
position: 1191566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1191762-1191856:1:exon

position:1191762:1
position: 1191762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191856:1
position: 1191856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1191958-1192062:1:exon

position:1191958:1
position: 1191958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192062:1
position: 1192062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1192155-1192201:1:exon

position:1192155:1
position: 1192155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192201:1
position: 1192201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1192362-1192425:1:exon

position:1192362:1
position: 1192362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192425:1
position: 1192425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1192496-1192594:1:exon

position:1192496:1
position: 1192496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192594:1
position: 1192594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1192675-1192778:1:exon

position:1192675:1
position: 1192675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192778:1
position: 1192778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1192861-1193008:1:exon

position:1192861:1
position: 1192861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193008:1
position: 1193008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1193110-1193228:1:exon

position:1193110:1
position: 1193110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193228:1
position: 1193228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1193312-1193398:1:exon

position:1193312:1
position: 1193312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193398:1
position: 1193398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1193479-1193544:1:exon

position:1193479:1
position: 1193479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193544:1
position: 1193544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1193655-1193759:1:exon

position:1193655:1
position: 1193655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193759:1
position: 1193759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1194065-1194127:1:exon

position:1194065:1
position: 1194065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194127:1
position: 1194127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1194245-1194445:1:exon

position:1194245:1
position: 1194245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194445:1
position: 1194445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1194617-1194843:1:exon

position:1194617:1
position: 1194617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194843:1
position: 1194843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1194918-1195118:1:exon

position:1194918:1
position: 1194918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195118:1
position: 1195118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1195205-1195298:1:exon

position:1195205:1
position: 1195205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195298:1
position: 1195298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1195528-1195677:1:exon

position:1195528:1
position: 1195528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195677:1
position: 1195677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1195766-1195834:1:exon

position:1195766:1
position: 1195766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195834:1
position: 1195834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1196090-1196176:1:exon

position:1196090:1
position: 1196090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196176:1
position: 1196176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1196438-1196512:1:exon

position:1196438:1
position: 1196438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196512:1
position: 1196512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1196621-1196756:1:exon

position:1196621:1
position: 1196621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196756:1
position: 1196756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1196870-1196976:1:exon

position:1196870:1
position: 1196870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196976:1
position: 1196976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1197070-1197202:1:exon

position:1197070:1
position: 1197070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197202:1
position: 1197202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1197280-1197432:1:exon

position:1197280:1
position: 1197280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197432:1
position: 1197432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1197503-1197630:1:exon

position:1197503:1
position: 1197503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197630:1
position: 1197630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1197929-1198142:1:exon

position:1197929:1
position: 1197929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYO1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: unconventional myosin-Ia
translation: MEATTSLLDAAAVGDLVLLDPLNEDSLLRTLQERFKRGDIYTYIGSVVISVNPYRSLPIYTPETVQEYRNCSFFAVKPHIYAIADDAYRSLRDQDRDQCILITGESGAGKTEASKLVMSYVAAVCSEGEEVDKVKEQLLQSNPVLEAFGNAKTIRNDNSSRFGKYMDLEFDFRGQPLGGVISNYLLEKSRIVRHVKGERNFHIFYQLLAGGSPQLLQQLKLHQDCRHYSYLNRESSGLPGVDDAANFHAMQDAMRIIGFSPAEVTALLQVTAVVLKLGNVKLNGSFQASGMEACSIADPQELQEICELIGLDPSVLEKALCSRTVKARNEMVLTPLSVPQGYHSRDALAKNIYSRLFDWLVGRINTSIQVNPGKQRKVMGVLDIYGFEIFQDNSFEQFIINYCNEKLQQIFILMTLKEEQEEYVREGIKWTPVEFFDNSIICNLIENSKGGILAMLDEECLRPGVVNEDTFLTKLNQLFANHKHYESRETQNTRHIMDASLPPQCFRIHHYAGKVTYNVTGFIEKNNDLLFRDLSQAMWAAQHTLLHSLFPEGDPQKVSLKLPPTAGFQFKTSVATLMKNLYSKNPNYIRCIKPNETKSAMLFTPELVLAQVRYLGLMENVRVRRAGYAFRQLYGSFLERYKMLCPRTWPRWAGSEREGAELLLAELPYPPEELAFGHTKIFIRSPHTLFDMEKRRQDRVNQLVTLIQKMFRGWRCRTQYQLMRKSQILISAWFRGHSQKNKYKQMKRSALLIQAYARGWKSRRLLRELKSQRQRHTAATTITAYWRGYQVRRAYRRYFRSGAGTRLANFIYRQLVQKFLVGLERNLPSLSVMDKTWPPPPYKFLTNANQELRDIFYRWKCKKYREQLTPQRRALLQTKLCASELFKDKKTLYSKSLQQPFQGEYLGLTKNPKYQKLHAVAKDKLVMAETVRKVNRGNGKTVPRLLLLTTEHLILADPKAAQPKTVLSLSNIQRVSVTRFSDGFLALHLKETSTGGNKGDFLLISDHLIELLARLHQTLMDTMAQALPLNITDRFSTHFQKGDVAVTVVESPQAGGTIPICKKRGSNKMEVLVH
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: join(1191182..1191304,1191451..1191566,1191762..1191856,1191958..1192062,1192155..1192201,1192362..1192425,1192496..1192594,1192675..1192778,1192861..1193008,1193110..1193228,1193312..1193398,1193479..1193544,1193655..1193759,1194065..1194127,1194245..1194445,1194617..1194843,1194918..1195118,1195205..1195298,1195528..1195677,1195766..1195834,1196090..1196176,1196438..1196512,1196621..1196756,1196870..1196976,1197070..1197202,1197280..1197432,1197503..1197630,1197929..1198052)
location: region:1191182-1198052:1
so has part: feature:1191182-1191304:1:exon
so has part: feature:1191451-1191566:1:exon
so has part: feature:1191762-1191856:1:exon
so has part: feature:1191958-1192062:1:exon
so has part: feature:1192155-1192201:1:exon
so has part: feature:1192362-1192425:1:exon
so has part: feature:1192496-1192594:1:exon
so has part: feature:1192675-1192778:1:exon
so has part: feature:1192861-1193008:1:exon
so has part: feature:1193110-1193228:1:exon
so has part: feature:1193312-1193398:1:exon
so has part: feature:1193479-1193544:1:exon
so has part: feature:1193655-1193759:1:exon
so has part: feature:1194065-1194127:1:exon
so has part: feature:1194245-1194445:1:exon
so has part: feature:1194617-1194843:1:exon
so has part: feature:1194918-1195118:1:exon
so has part: feature:1195205-1195298:1:exon
so has part: feature:1195528-1195677:1:exon
so has part: feature:1195766-1195834:1:exon
so has part: feature:1196090-1196176:1:exon
so has part: feature:1196438-1196512:1:exon
so has part: feature:1196621-1196756:1:exon
so has part: feature:1196870-1196976:1:exon
so has part: feature:1197070-1197202:1:exon
so has part: feature:1197280-1197432:1:exon
so has part: feature:1197503-1197630:1:exon
so has part: feature:1197929-1198052:1:exon

XP_030324079.1
type: Protein
SIO_000068: ncbiprotein

position:1191182:1
position: 1191182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198052:1
position: 1198052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191182-1191304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191451-1191566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191762-1191856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1191958-1192062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1192155-1192201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1192362-1192425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1192496-1192594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1192675-1192778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192861-1193008:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193110-1193228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193312-1193398:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1193479-1193544:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1193655-1193759:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1194065-1194127:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1194245-1194445:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1194617-1194843:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1194918-1195118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1195205-1195298:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1195528-1195677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1195766-1195834:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1196090-1196176:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1196438-1196512:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1196621-1196756:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1196870-1196976:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1197070-1197202:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1197280-1197432:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1197503-1197630:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1197929-1198052:1:exon

LOC115600013
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115600013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1200950..1201800
location: region:1200950-1201800:1
so has part: feature:1200950-1201800:1:exon
subclass of: SO_0000010

115600013
type: Gene
SIO_000068: ncbigene

position:1200950:1
position: 1200950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201800:1
position: 1201800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200950-1201800:1:exon

LOC115600013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115600013
product: tachykinin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468232.1
SIO_010081: LOC115600013
subclass of: SO_0000673
so part of: LOC115600013
location: join(1200950..1201051,1201139..1201235,1201318..1201347,1201420..1201800)
location: region:1200950-1201800:1
so has part: feature:1200950-1201051:1:exon
so has part: feature:1201139-1201235:1:exon
so has part: feature:1201318-1201347:1:exon
so has part: feature:1201420-1201800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1200950-1201051:1:exon

position:1201051:1
position: 1201051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1201139-1201235:1:exon

position:1201139:1
position: 1201139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201235:1
position: 1201235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1201318-1201347:1:exon

position:1201318:1
position: 1201318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201347:1
position: 1201347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1201420-1201800:1:exon

position:1201420:1
position: 1201420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115600013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115600013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tachykinin-3-like
translation: MRSHPALAALLVLALPFALARRPPAPPDPAPPAQAMTVPEPLPRRARDSTGAAYAALLQLLEEEEAGGPAPAAPQKRDMHDFFVGLMGKRAEGRGSGGPNPRCSPGPPAAPLRAA
SIO_010081: LOC115600013
subclass of: SO_0000673
so part of: LOC115600013
location: join(1200950..1201051,1201139..1201235,1201318..1201347,1201420..1201538)
location: region:1200950-1201538:1
so has part: feature:1200950-1201051:1:exon
so has part: feature:1201139-1201235:1:exon
so has part: feature:1201318-1201347:1:exon
so has part: feature:1201420-1201538:1:exon

XP_030324092.1
type: Protein
SIO_000068: ncbiprotein

position:1201538:1
position: 1201538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200950-1201051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201139-1201235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201318-1201347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201420-1201538:1:exon

ZBTB39
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1202136..1209578
location: region:1202136-1209578:1
so has part: feature:1202136-1209578:1:exon
subclass of: SO_0000010

103533010
type: Gene
SIO_000068: ncbigene

position:1202136:1
position: 1202136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209578:1
position: 1209578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202136-1209578:1:exon

ZBTB39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZBTB39
product: zinc finger and BTB domain containing 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030468220.1
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: join(1202136..1202200,1203593..1209578)
location: region:1202136-1209578:1
so has part: feature:1202136-1202200:1:exon
so has part: feature:1203593-1209578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1202136-1202200:1:exon

position:1202200:1
position: 1202200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1203593-1209578:1:exon

position:1203593:1
position: 1203593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 39
translation: MGMRIKLHSTNHPNNLLKELNKCRLSETMCDVTILVGTRSFAAHKAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKILSFVYTSELFTDLINVGVIYEVAERLGMEDLLKACHSTFPDLESSAITKQPSLAASEGRSGPLSSTSSEQSHSLGEIRSGGEHFGPERNYLLHGEVSGSYKEDDRNPVGEASQALPLMHSQQPPKAEQEPSQGQFAPAVSLATQPSLGGVNILVQTTTSSCQQYKIQSNGDYGKGGFYSTDPSLDVSTGSNSCPSNSDHSKEQGFGQMDELQLEDLGEEELHFEDASEELGPSEEVIELSDDSEEELAFENDSRDSKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTLHRREGVFDNNIIVHPSDPLPGKVTTFGGGPGTELSCAACGKPLAKDFHTVRSHILDHVNLKSQMCCVCDQRHLNLCSLMWHTLSHLGISVFSCSVCANSFVDRHLLEKHLAVHQNVEEALFRCHFCGQSFKLEAAYRYHVSQHKCGGSLDIRPSFGERLHQQGLQKRKLPEEFLSEDLALQNQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKCHLRTHSGALMYRCTVCGHYSSTLNLMSKHIGVHKGSLPPDFTIEQTFMYIIHSKEAEKNTDS
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: 1203702..1205840
location: region:1203702-1205840:1
so has part: feature:1203702-1205840:1:exon

XP_030324080.1
type: Protein
SIO_000068: ncbiprotein

position:1203702:1
position: 1203702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205840:1
position: 1205840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203702-1205840:1:exon

GPR182
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1209865..1213346)
location: region:1209865-1213346:-1
so has part: feature:1209865-1213346:-1:exon
subclass of: SO_0000010

103533011
type: Gene
SIO_000068: ncbigene

position:1209865:-1
position: 1209865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213346:-1
position: 1213346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209865-1213346:-1:exon

GPR182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPR182
product: G protein-coupled receptor 182
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030468227.1
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: complement(join(1209865..1212411,1213098..1213346))
location: region:1209865-1213346:-1
so has part: feature:1213098-1213346:-1:exon
so has part: feature:1209865-1212411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213098-1213346:-1:exon

position:1213098:-1
position: 1213098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209865-1212411:-1:exon

position:1212411:-1
position: 1212411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 182
translation: MAETTTAPPETHTLQNEYGDYHNWSELFHLLNYTYTFCEFSLDENVKRVILFILYLIIFVVGLVENLLVIWVNWQTRGNKSLVNLYIINMAIADLGVMLSLPIWMLEVMLDYTWLWGSFLCRFTHYFYFANMYASIFFLTGLSVDRYVSLTSSSLFWRKHQHRARRVICTCSWVLAAAIPFLEVAHMQLVNTGEPICIFMAPFETYDKWALAVSLATTTIGFLIPFPIIAIFNILTARFIKRTKPESRKHCLLIYAYIIVFLISWLPFHIMLTLLTLDGNHIILHCTFAHFLYFFYDIIDCFTLLHCVINPILYNFLSKNFRSKLISAVVKYIPKDQGSHKGADKSSSTTQHSIVITKDNNPPN
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: complement(1211309..1212403)
location: region:1211309-1212403:-1
so has part: feature:1211309-1212403:-1:exon

XP_030324087.1
type: Protein
SIO_000068: ncbiprotein

position:1211309:-1
position: 1211309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212403:-1
position: 1212403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211309-1212403:-1:exon

LOC103533027
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1215465..1217103)
location: region:1215465-1217103:-1
so has part: feature:1215465-1217103:-1:exon
subclass of: SO_0000010

103533027
type: Gene
SIO_000068: ncbigene

position:1215465:-1
position: 1215465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217103:-1
position: 1217103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215465-1217103:-1:exon

LOC103533027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533027
product: retinol dehydrogenase 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008498843.2
SIO_010081: LOC103533027
subclass of: SO_0000673
so part of: LOC103533027
location: complement(join(1215465..1215700,1215791..1215954,1216376..1216634,1216788..1217103))
location: region:1215465-1217103:-1
so has part: feature:1216788-1217103:-1:exon
so has part: feature:1216376-1216634:-1:exon
so has part: feature:1215791-1215954:-1:exon
so has part: feature:1215465-1215700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1216788-1217103:-1:exon

position:1216788:-1
position: 1216788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216376-1216634:-1:exon

position:1216376:-1
position: 1216376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216634:-1
position: 1216634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215791-1215954:-1:exon

position:1215791:-1
position: 1215791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215954:-1
position: 1215954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215465-1215700:-1:exon

position:1215700:-1
position: 1215700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103533027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16
translation: MWLYAALMLVVLYLLWHWRWKRETVPRLSEKFVLITGCDSGFGNLLARQLDKRGVRVLAACLTQLGATRLQEVTSPRLQTVLLDVTSSESIASATAWVKERVGNQGLWGLVNNAGVCMPAAPNEWLTKEDFLKVLNVNLLGLIDVTLNFLPLVRQAQGRVVNVASVMGRVAFFSGGYCISKFGVEAFSDTLRREMRPFGVTVSIIEPGGFRTNFLQPAEVLKVLESIWERLPPETQAAYGHHYLEKYAKSGVLLHHLSSFCLSHVTKAMSHALLSRHPRTRYPAGWDARPVLFFSHFPSWVMDTAISFFLPTPARGTPPRS
SIO_010081: LOC103533027
subclass of: SO_0000673
so part of: LOC103533027
location: complement(join(1215474..1215700,1215791..1215954,1216376..1216634,1216788..1217103))
location: region:1215474-1217103:-1
so has part: feature:1216788-1217103:-1:exon
so has part: feature:1216376-1216634:-1:exon
so has part: feature:1215791-1215954:-1:exon
so has part: feature:1215474-1215700:-1:exon

XP_008497065.2
type: Protein
SIO_000068: ncbiprotein

position:1215474:-1
position: 1215474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216788-1217103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216376-1216634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215791-1215954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215474-1215700:-1:exon

LOC103537739
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1217772..1219826)
location: region:1217772-1219826:-1
so has part: feature:1217772-1219826:-1:exon
subclass of: SO_0000010

103537739
type: Gene
SIO_000068: ncbigene

position:1217772:-1
position: 1217772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219826:-1
position: 1219826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217772-1219826:-1:exon

LOC103537739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537739
product: retinol dehydrogenase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 41 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030468228.1
SIO_010081: LOC103537739
subclass of: SO_0000673
so part of: LOC103537739
location: complement(join(1217772..1218144,1218266..1218429,1218957..1219215,1219326..1219826))
location: region:1217772-1219826:-1
so has part: feature:1219326-1219826:-1:exon
so has part: feature:1218957-1219215:-1:exon
so has part: feature:1218266-1218429:-1:exon
so has part: feature:1217772-1218144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219326-1219826:-1:exon

position:1219326:-1
position: 1219326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1218957-1219215:-1:exon

position:1218957:-1
position: 1218957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219215:-1
position: 1219215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1218266-1218429:-1:exon

position:1218266:-1
position: 1218266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218429:-1
position: 1218429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1217772-1218144:-1:exon

position:1218144:-1
position: 1218144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16-like
translation: MWLYVVAALAVLYLLRRWHREQQTVPRLSDKFVLITGCDSGFGNLLARQLDKRGMRVLAACLTQPGAARLQEVTSSRLQTVLLDVTSSESIATATTWVKERVGNQGLWGLVNNAGVSVPTAPNEWLTKEDFAKILDVNLLGLIDVTLNLLPLVKQARGRVVNVASVMGRVSAFGGGYCISKYGVEAFSDSLRIEMRNFGVKVCIIEPGYFKTAVTSIEILEKNFLAIWQKLPEETKANYGDDYLKKCLSSLSKVQRSCSSNLKLVTDCMEHALTSQFPRTRYSAGWDAKLLYLPLSYLPSAFVDNVLSWSYPKPAQKV
SIO_010081: LOC103537739
subclass of: SO_0000673
so part of: LOC103537739
location: complement(join(1217927..1218144,1218266..1218429,1218957..1219215,1219326..1219641))
location: region:1217927-1219641:-1
so has part: feature:1219326-1219641:-1:exon
so has part: feature:1218957-1219215:-1:exon
so has part: feature:1218266-1218429:-1:exon
so has part: feature:1217927-1218144:-1:exon

XP_030324088.1
type: Protein
SIO_000068: ncbiprotein

position:1217927:-1
position: 1217927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219641:-1
position: 1219641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219326-1219641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218957-1219215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218266-1218429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217927-1218144:-1:exon

PRIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PRIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1219871..1222694
location: region:1219871-1222694:1
so has part: feature:1219871-1222694:1:exon
subclass of: SO_0000010

103533028
type: Gene
SIO_000068: ncbigene

position:1219871:1
position: 1219871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222694:1
position: 1222694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219871-1222694:1:exon

PRIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRIM1
product: DNA primase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030468224.1
SIO_010081: PRIM1
subclass of: SO_0000673
so part of: PRIM1
location: join(1219871..1220223,1220395..1220552,1220649..1220755,1220847..1220920,1221077..1221213,1221285..1221343,1221421..1221530,1221629..1221720,1221812..1221956,1222029..1222098,1222180..1222265,1222344..1222442,1222530..1222694)
location: region:1219871-1222694:1
so has part: feature:1219871-1220223:1:exon
so has part: feature:1220395-1220552:1:exon
so has part: feature:1220649-1220755:1:exon
so has part: feature:1220847-1220920:1:exon
so has part: feature:1221077-1221213:1:exon
so has part: feature:1221285-1221343:1:exon
so has part: feature:1221421-1221530:1:exon
so has part: feature:1221629-1221720:1:exon
so has part: feature:1221812-1221956:1:exon
so has part: feature:1222029-1222098:1:exon
so has part: feature:1222180-1222265:1:exon
so has part: feature:1222344-1222442:1:exon
so has part: feature:1222530-1222694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219871-1220223:1:exon

position:1220223:1
position: 1220223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220395-1220552:1:exon

position:1220395:1
position: 1220395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220552:1
position: 1220552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220649-1220755:1:exon

position:1220649:1
position: 1220649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220755:1
position: 1220755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1220847-1220920:1:exon

position:1220847:1
position: 1220847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220920:1
position: 1220920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1221077-1221213:1:exon

position:1221077:1
position: 1221077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221213:1
position: 1221213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1221285-1221343:1:exon

position:1221285:1
position: 1221285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221343:1
position: 1221343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1221421-1221530:1:exon

position:1221421:1
position: 1221421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221530:1
position: 1221530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1221629-1221720:1:exon

position:1221629:1
position: 1221629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221720:1
position: 1221720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1221812-1221956:1:exon

position:1221812:1
position: 1221812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221956:1
position: 1221956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1222029-1222098:1:exon

position:1222029:1
position: 1222029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222098:1
position: 1222098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1222180-1222265:1:exon

position:1222180:1
position: 1222180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222265:1
position: 1222265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1222344-1222442:1:exon

position:1222344:1
position: 1222344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222442:1
position: 1222442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1222530-1222694:1:exon

position:1222530:1
position: 1222530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA primase small subunit
translation: MVPFEPSALPELLPVFYRRLFPHGAYGRWLGYGGVVKNYFQMREFSFTLRDDVYVRFQSFDNPQELERELQKTNPYKIDIGAVYSHRPNQHNTVHLGAFQPQEKELVFDIDMTDYDDVRTCCSSADICSKCWTLMTIAVRVIDRALVEDLGVRHRLWVYSGRRGVHCWVCDDAVRRWSPALRAAAVEYLTLVKGGAETVKKVNISEPIHPFIRRSVAVVEKFFEAYALVGQDILGSPESWEKVLALVPEEHRGMLRGEFPRKRDSVQRWELLKGQMEWTRRGPGSGKSGPCYADWEVMLQYCFPRLDINVSKGLGHLLKSPFSVHPKTGRISVPLDLQKLDRFDPFAVPTITSLCHELDTAGDEAEQDDGGETEPKRRARDYKRTSLAPYVRVFEQFVEEMERSRRGERLRRSDLQGDF
SIO_010081: PRIM1
subclass of: SO_0000673
so part of: PRIM1
location: join(1220121..1220223,1220395..1220552,1220649..1220755,1220847..1220920,1221077..1221213,1221285..1221343,1221421..1221530,1221629..1221720,1221812..1221956,1222029..1222098,1222180..1222265,1222344..1222442,1222530..1222549)
location: region:1220121-1222549:1
so has part: feature:1220121-1220223:1:exon
so has part: feature:1220395-1220552:1:exon
so has part: feature:1220649-1220755:1:exon
so has part: feature:1220847-1220920:1:exon
so has part: feature:1221077-1221213:1:exon
so has part: feature:1221285-1221343:1:exon
so has part: feature:1221421-1221530:1:exon
so has part: feature:1221629-1221720:1:exon
so has part: feature:1221812-1221956:1:exon
so has part: feature:1222029-1222098:1:exon
so has part: feature:1222180-1222265:1:exon
so has part: feature:1222344-1222442:1:exon
so has part: feature:1222530-1222549:1:exon

XP_030324084.1
type: Protein
SIO_000068: ncbiprotein

position:1220121:1
position: 1220121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222549:1
position: 1222549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220121-1220223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220395-1220552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220649-1220755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220847-1220920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221077-1221213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1221285-1221343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221421-1221530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221629-1221720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221812-1221956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222029-1222098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1222180-1222265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1222344-1222442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1222530-1222549:1:exon

NACA
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1222887..1229615
location: region:1222887-1229615:1
so has part: feature:1222887-1229615:1:exon
subclass of: SO_0000010

103533029
type: Gene
SIO_000068: ncbigene

position:1222887:1
position: 1222887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229615:1
position: 1229615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222887-1229615:1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NACA
product: nascent polypeptide associated complex subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468229.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: join(1222887..1222993,1223444..1223515,1227995..1228080,1228198..1228275,1228486..1228632,1228862..1228990,1229269..1229391,1229487..1229615)
location: region:1222887-1229615:1
so has part: feature:1222887-1222993:1:exon
so has part: feature:1223444-1223515:1:exon
so has part: feature:1227995-1228080:1:exon
so has part: feature:1228198-1228275:1:exon
so has part: feature:1228486-1228632:1:exon
so has part: feature:1228862-1228990:1:exon
so has part: feature:1229269-1229391:1:exon
so has part: feature:1229487-1229615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222887-1222993:1:exon

position:1222993:1
position: 1222993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223444-1223515:1:exon

position:1223444:1
position: 1223444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223515:1
position: 1223515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1227995-1228080:1:exon

position:1227995:1
position: 1227995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228080:1
position: 1228080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1228198-1228275:1:exon

position:1228198:1
position: 1228198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228275:1
position: 1228275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1228486-1228632:1:exon

position:1228486:1
position: 1228486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228632:1
position: 1228632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1228862-1228990:1:exon

position:1228862:1
position: 1228862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228990:1
position: 1228990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1229269-1229391:1:exon

position:1229269:1
position: 1229269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229391:1
position: 1229391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1229487-1229615:1:exon

position:1229487:1
position: 1229487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha
translation: MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: join(1223446..1223515,1227995..1228080,1228198..1228275,1228486..1228632,1228862..1228990,1229269..1229391,1229487..1229501)
location: region:1223446-1229501:1
so has part: feature:1223446-1223515:1:exon
so has part: feature:1227995-1228080:1:exon
so has part: feature:1228198-1228275:1:exon
so has part: feature:1228486-1228632:1:exon
so has part: feature:1228862-1228990:1:exon
so has part: feature:1229269-1229391:1:exon
so has part: feature:1229487-1229501:1:exon

XP_030324089.1
type: Protein
SIO_000068: ncbiprotein

position:1223446:1
position: 1223446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229501:1
position: 1229501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223446-1223515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227995-1228080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228198-1228275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228486-1228632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228862-1228990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229269-1229391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229487-1229501:1:exon

PTGES3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1230173..1236574
location: region:1230173-1236574:1
so has part: feature:1230173-1236574:1:exon
subclass of: SO_0000010

115600012
type: Gene
SIO_000068: ncbigene

position:1230173:1
position: 1230173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236574:1
position: 1236574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230173-1236574:1:exon

PTGES3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTGES3
product: prostaglandin E synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030468230.1
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: join(1230173..1230341,1234169..1234282,1234452..1234521,1234711..1234809,1235026..1235115,1235372..1235434,1235750..1235774,1236167..1236574)
location: region:1230173-1236574:1
so has part: feature:1230173-1230341:1:exon
so has part: feature:1234169-1234282:1:exon
so has part: feature:1234452-1234521:1:exon
so has part: feature:1234711-1234809:1:exon
so has part: feature:1235026-1235115:1:exon
so has part: feature:1235372-1235434:1:exon
so has part: feature:1235750-1235774:1:exon
so has part: feature:1236167-1236574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230173-1230341:1:exon

position:1230341:1
position: 1230341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1234169-1234282:1:exon

position:1234169:1
position: 1234169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234282:1
position: 1234282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1234452-1234521:1:exon

position:1234452:1
position: 1234452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234521:1
position: 1234521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1234711-1234809:1:exon

position:1234711:1
position: 1234711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234809:1
position: 1234809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1235026-1235115:1:exon

position:1235026:1
position: 1235026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235115:1
position: 1235115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1235372-1235434:1:exon

position:1235372:1
position: 1235372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235434:1
position: 1235434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1235750-1235774:1:exon

position:1235750:1
position: 1235750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235774:1
position: 1235774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1236167-1236574:1:exon

position:1236167:1
position: 1236167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTGES3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E synthase 3
translation: MQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSILCCLRKGESGQAWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDDDVDLPEVDGADDDSPDSDDEKMPDLE
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: join(1230340..1230341,1234169..1234282,1234452..1234521,1234711..1234809,1235026..1235115,1235372..1235434,1235750..1235774,1236167..1236186)
location: region:1230340-1236186:1
so has part: feature:1230340-1230341:1:exon
so has part: feature:1234169-1234282:1:exon
so has part: feature:1234452-1234521:1:exon
so has part: feature:1234711-1234809:1:exon
so has part: feature:1235026-1235115:1:exon
so has part: feature:1235372-1235434:1:exon
so has part: feature:1235750-1235774:1:exon
so has part: feature:1236167-1236186:1:exon

XP_030324090.1
type: Protein
SIO_000068: ncbiprotein

position:1230340:1
position: 1230340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236186:1
position: 1236186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230340-1230341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234169-1234282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234452-1234521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1234711-1234809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1235026-1235115:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235372-1235434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235750-1235774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236167-1236186:1:exon

LOC115600014
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115600014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1233329..1233979
location: region:1233329-1233979:1
so has part: feature:1233329-1233979:1:exon
subclass of: SO_0000011

115600014
type: Gene
SIO_000068: ncbigene

position:1233329:1
position: 1233329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233979:1
position: 1233979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233329-1233979:1:exon

LOC115600014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115600014
product: uncharacterized LOC115600014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988768.1
SIO_010081: LOC115600014
subclass of: SO_0000673
so part of: LOC115600014
location: join(1233329..1233431,1233567..1233593,1233722..1233782,1233936..1233979)
location: region:1233329-1233979:1
so has part: feature:1233329-1233431:1:exon
so has part: feature:1233567-1233593:1:exon
so has part: feature:1233722-1233782:1:exon
so has part: feature:1233936-1233979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233329-1233431:1:exon

position:1233431:1
position: 1233431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233567-1233593:1:exon

position:1233567:1
position: 1233567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233593:1
position: 1233593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233722-1233782:1:exon

position:1233722:1
position: 1233722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233782:1
position: 1233782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233936-1233979:1:exon

position:1233936:1
position: 1233936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAZ2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1237345..1242174
location: region:1237345-1242174:1
so has part: feature:1237345-1242174:1:exon
subclass of: SO_0000010

103533030
type: Gene
SIO_000068: ncbigene

position:1237345:1
position: 1237345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242174:1
position: 1242174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237345-1242174:1:exon

BAZ2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BAZ2A
product: bromodomain adjacent to zinc finger domain 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468077.1
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: join(1237345..1237486,1237857..1237902,1238115..1238274,1238377..1238436,1238518..1238653,1238738..1239330,1239603..1239828,1239907..1240062,1240143..1240306,1240389..1240672,1240750..1240882,1240961..1241107,1241193..1241410,1241498..1241641,1241765..1242174)
location: region:1237345-1242174:1
so has part: feature:1237345-1237486:1:exon
so has part: feature:1237857-1237902:1:exon
so has part: feature:1238115-1238274:1:exon
so has part: feature:1238377-1238436:1:exon
so has part: feature:1238518-1238653:1:exon
so has part: feature:1238738-1239330:1:exon
so has part: feature:1239603-1239828:1:exon
so has part: feature:1239907-1240062:1:exon
so has part: feature:1240143-1240306:1:exon
so has part: feature:1240389-1240672:1:exon
so has part: feature:1240750-1240882:1:exon
so has part: feature:1240961-1241107:1:exon
so has part: feature:1241193-1241410:1:exon
so has part: feature:1241498-1241641:1:exon
so has part: feature:1241765-1242174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1237345-1237486:1:exon

position:1237486:1
position: 1237486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237857-1237902:1:exon

position:1237857:1
position: 1237857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237902:1
position: 1237902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1238115-1238274:1:exon

position:1238115:1
position: 1238115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238274:1
position: 1238274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1238377-1238436:1:exon

position:1238377:1
position: 1238377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238436:1
position: 1238436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1238518-1238653:1:exon

position:1238518:1
position: 1238518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238653:1
position: 1238653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1238738-1239330:1:exon

position:1238738:1
position: 1238738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239330:1
position: 1239330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1239603-1239828:1:exon

position:1239603:1
position: 1239603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239828:1
position: 1239828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239907-1240062:1:exon

position:1239907:1
position: 1239907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240062:1
position: 1240062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1240143-1240306:1:exon

position:1240143:1
position: 1240143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240306:1
position: 1240306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1240389-1240672:1:exon

position:1240389:1
position: 1240389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240672:1
position: 1240672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1240750-1240882:1:exon

position:1240750:1
position: 1240750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240882:1
position: 1240882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1240961-1241107:1:exon

position:1240961:1
position: 1240961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241107:1
position: 1241107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1241193-1241410:1:exon

position:1241193:1
position: 1241193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241410:1
position: 1241410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1241498-1241641:1:exon

position:1241498:1
position: 1241498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241641:1
position: 1241641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1241765-1242174:1:exon

position:1241765:1
position: 1241765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAZ2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain adjacent to zinc finger domain protein 2A
translation: MLGLAGRCSAAAAAAARPLLCRGAGPGRDLLPLLLSRGAGPAAATAALHYRKNKWIIEGRLRRLKVALAKRTGRPESEITGLEDGRRRRSSRLTEEMGLEMEEEESRGRKSRREEEADASVSSVPELERQIEKLAKRQMFFRKKLLHSSQTLRAASLGQDRYRRRYWVLPHLGGIFVEGTEAAEPEPQEPPEEKVPPPPPPPPPPPLVKQEVVEVPMSIRTNCTASRSRGRPRKSKEDLSQHCGPRPPPPLNGVLEEPEPLGQSQHDLSQSAFLSWLSQTQSSLLKDSVLTPASSPGKGDTGLPPSKAPSDPTEEEEEEEEESAPEVVEKQGPWFNLLPQTPCDDRGPLATSSAEPSPRVSTQPRGHPRGELPRGLARQLNGLPMDDPAAPLLASTPVPASTRAPGACPRSRGSLEKLQDLPGQPKRRGRPPTKFFKQIEQKYLTQLTEQPVPPEMQSGWWWVQDPEELEAVTRALHPRGIREKALHKHLTKHKEFLREVCLRSSTDPIFHPRPEAAGAAVSQEALARWSVMERAYETDLAVLQWVEELEQRVLMADLQIRGWTCPSPDSTRDDLQYCEHKVEPLEDITVRSRRDGLPLRRESNNPLDLAVLRLAALEQNLERRYLKEPLWPLHEVVVEKVVLSNPEELSLGPTEIAYEITPRVRTWRQTLERCRSAAQVSLCIYQLEKSIAWEKSVNRVTCLVCRRGDDDEHLLLCDGCDRGCHLYCHRPKMTEVPEGDWFCSVCISRVGEYRDPISPRRGKKRKRGRLFGGSPTEDRGSPRRRPGSRRREGLTPPAQGPRASRRRGTALRGQPSDLTFCEIILMEMESHEDAWPFLEPVNPRLVPGYRRIIKNPMDFSTMRTRLLRGGYSSSEEFAADAMLVFDNCQTFNEDESAVGKAGRAMRRFFQSRWEEFYQGKNATTP
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: join(1237345..1237486,1237857..1237902,1238115..1238274,1238377..1238436,1238518..1238653,1238738..1239330,1239603..1239828,1239907..1240062,1240143..1240306,1240389..1240672,1240750..1240882,1240961..1241107,1241193..1241410,1241498..1241641,1241765..1241933)
location: region:1237345-1241933:1
so has part: feature:1237345-1237486:1:exon
so has part: feature:1237857-1237902:1:exon
so has part: feature:1238115-1238274:1:exon
so has part: feature:1238377-1238436:1:exon
so has part: feature:1238518-1238653:1:exon
so has part: feature:1238738-1239330:1:exon
so has part: feature:1239603-1239828:1:exon
so has part: feature:1239907-1240062:1:exon
so has part: feature:1240143-1240306:1:exon
so has part: feature:1240389-1240672:1:exon
so has part: feature:1240750-1240882:1:exon
so has part: feature:1240961-1241107:1:exon
so has part: feature:1241193-1241410:1:exon
so has part: feature:1241498-1241641:1:exon
so has part: feature:1241765-1241933:1:exon

XP_030323937.1
type: Protein
SIO_000068: ncbiprotein

position:1241933:1
position: 1241933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237345-1237486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237857-1237902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238115-1238274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238377-1238436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238518-1238653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238738-1239330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1239603-1239828:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239907-1240062:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1240143-1240306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240389-1240672:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240750-1240882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1240961-1241107:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1241193-1241410:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1241498-1241641:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1241765-1241933:1:exon

RBMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RBMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1245738..1249154)
location: region:1245738-1249154:-1
so has part: feature:1245738-1249154:-1:exon
subclass of: SO_0000010

115600011
type: Gene
SIO_000068: ncbigene

position:1245738:-1
position: 1245738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249154:-1
position: 1249154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245738-1249154:-1:exon

RBMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBMS2
product: RNA binding motif single stranded interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030468226.1
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: complement(join(1245738..1246156,1246232..1246309,1246414..1246521,1246820..1246867,1247171..1247264,1247352..1247398,1247496..1247605,1247698..1247777,1247897..1248048,1248141..1248232,1248341..1248399,1248529..1248677,1248858..1249154))
location: region:1245738-1249154:-1
so has part: feature:1248858-1249154:-1:exon
so has part: feature:1248529-1248677:-1:exon
so has part: feature:1248341-1248399:-1:exon
so has part: feature:1248141-1248232:-1:exon
so has part: feature:1247897-1248048:-1:exon
so has part: feature:1247698-1247777:-1:exon
so has part: feature:1247496-1247605:-1:exon
so has part: feature:1247352-1247398:-1:exon
so has part: feature:1247171-1247264:-1:exon
so has part: feature:1246820-1246867:-1:exon
so has part: feature:1246414-1246521:-1:exon
so has part: feature:1246232-1246309:-1:exon
so has part: feature:1245738-1246156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248858-1249154:-1:exon

position:1248858:-1
position: 1248858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1248529-1248677:-1:exon

position:1248529:-1
position: 1248529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248677:-1
position: 1248677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1248341-1248399:-1:exon

position:1248341:-1
position: 1248341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248399:-1
position: 1248399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1248141-1248232:-1:exon

position:1248141:-1
position: 1248141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248232:-1
position: 1248232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1247897-1248048:-1:exon

position:1247897:-1
position: 1247897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248048:-1
position: 1248048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1247698-1247777:-1:exon

position:1247698:-1
position: 1247698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247777:-1
position: 1247777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1247496-1247605:-1:exon

position:1247496:-1
position: 1247496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247605:-1
position: 1247605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1247352-1247398:-1:exon

position:1247352:-1
position: 1247352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247398:-1
position: 1247398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1247171-1247264:-1:exon

position:1247171:-1
position: 1247171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247264:-1
position: 1247264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1246820-1246867:-1:exon

position:1246820:-1
position: 1246820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246867:-1
position: 1246867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1246414-1246521:-1:exon

position:1246414:-1
position: 1246414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246521:-1
position: 1246521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1246232-1246309:-1:exon

position:1246232:-1
position: 1246232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246309:-1
position: 1246309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1245738-1246156:-1:exon

position:1246156:-1
position: 1246156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBMS2
product: RNA binding motif single stranded interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030468225.1
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: complement(join(1245738..1246156,1246232..1246309,1246414..1246521,1246820..1246867,1247171..1247264,1247352..1247398,1247496..1247605,1247698..1247777,1247897..1248054,1248141..1248232,1248341..1248399,1248529..1248677,1248858..1249154))
location: region:1245738-1249154:-1
so has part: feature:1248858-1249154:-1:exon
so has part: feature:1248529-1248677:-1:exon
so has part: feature:1248341-1248399:-1:exon
so has part: feature:1248141-1248232:-1:exon
so has part: feature:1247897-1248054:-1:exon
so has part: feature:1247698-1247777:-1:exon
so has part: feature:1247496-1247605:-1:exon
so has part: feature:1247352-1247398:-1:exon
so has part: feature:1247171-1247264:-1:exon
so has part: feature:1246820-1246867:-1:exon
so has part: feature:1246414-1246521:-1:exon
so has part: feature:1246232-1246309:-1:exon
so has part: feature:1245738-1246156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248858-1249154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248529-1248677:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248341-1248399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248141-1248232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1247897-1248054:-1:exon

position:1248054:-1
position: 1248054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1247698-1247777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1247496-1247605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247352-1247398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1247171-1247264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246820-1246867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246414-1246521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246232-1246309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1245738-1246156:-1:exon

RBMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif, single-stranded-interacting protein 2 isoform X2
translation: MLLSVQPRSGLPAFAYNKSSKKQPYVPPAQPLPPPSPSPAGGVPDQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPTAAQKAVTALKASGVQAQMAKEQDPTNLYISNLPLGVDEQELEALLKPFGQVVSTRILRDPHGASRGVGFARMESTEKCEAVITHFNGKYIKMPPGVPAPPDPLLCKFADGGQKKRQSQGKFVPNGRAWARDGDAGTVTLAYDPATALQNGFYPTPYGLAPSRMIAPPALAPYLPSPVSSYQVHGPAWMHQSYLVQPTGAVLAPAVDHPVPLQPSVVAPLAQQLGHLSLGSAGTYVPAAAAVPGAFIPPYPPVPPALPLEDGSAGPSHGPIESPSEPGAFPYPYPK
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: complement(join(1246076..1246156,1246232..1246309,1246414..1246521,1246820..1246867,1247171..1247264,1247352..1247398,1247496..1247605,1247698..1247777,1247897..1248048,1248141..1248232,1248341..1248399,1248529..1248677,1248858..1248923))
location: region:1246076-1248923:-1
so has part: feature:1248858-1248923:-1:exon
so has part: feature:1248529-1248677:-1:exon
so has part: feature:1248341-1248399:-1:exon
so has part: feature:1248141-1248232:-1:exon
so has part: feature:1247897-1248048:-1:exon
so has part: feature:1247698-1247777:-1:exon
so has part: feature:1247496-1247605:-1:exon
so has part: feature:1247352-1247398:-1:exon
so has part: feature:1247171-1247264:-1:exon
so has part: feature:1246820-1246867:-1:exon
so has part: feature:1246414-1246521:-1:exon
so has part: feature:1246232-1246309:-1:exon
so has part: feature:1246076-1246156:-1:exon

XP_030324086.1
type: Protein
SIO_000068: ncbiprotein

position:1246076:-1
position: 1246076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248923:-1
position: 1248923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248858-1248923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248529-1248677:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248341-1248399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248141-1248232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1247897-1248048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247698-1247777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1247496-1247605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247352-1247398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1247171-1247264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246820-1246867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246414-1246521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246232-1246309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246076-1246156:-1:exon

RBMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif, single-stranded-interacting protein 2 isoform X1
translation: MLLSVQPRSGLPAFAYNKSSKKQPYVPPAQPLPPPSPSPAGGVPDQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPTAAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLGVDEQELEALLKPFGQVVSTRILRDPHGASRGVGFARMESTEKCEAVITHFNGKYIKMPPGVPAPPDPLLCKFADGGQKKRQSQGKFVPNGRAWARDGDAGTVTLAYDPATALQNGFYPTPYGLAPSRMIAPPALAPYLPSPVSSYQVHGPAWMHQSYLVQPTGAVLAPAVDHPVPLQPSVVAPLAQQLGHLSLGSAGTYVPAAAAVPGAFIPPYPPVPPALPLEDGSAGPSHGPIESPSEPGAFPYPYPK
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: complement(join(1246076..1246156,1246232..1246309,1246414..1246521,1246820..1246867,1247171..1247264,1247352..1247398,1247496..1247605,1247698..1247777,1247897..1248054,1248141..1248232,1248341..1248399,1248529..1248677,1248858..1248923))
location: region:1246076-1248923:-1
so has part: feature:1248858-1248923:-1:exon
so has part: feature:1248529-1248677:-1:exon
so has part: feature:1248341-1248399:-1:exon
so has part: feature:1248141-1248232:-1:exon
so has part: feature:1247897-1248054:-1:exon
so has part: feature:1247698-1247777:-1:exon
so has part: feature:1247496-1247605:-1:exon
so has part: feature:1247352-1247398:-1:exon
so has part: feature:1247171-1247264:-1:exon
so has part: feature:1246820-1246867:-1:exon
so has part: feature:1246414-1246521:-1:exon
so has part: feature:1246232-1246309:-1:exon
so has part: feature:1246076-1246156:-1:exon

XP_030324085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1248858-1248923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248529-1248677:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248341-1248399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248141-1248232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1247897-1248054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247698-1247777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1247496-1247605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247352-1247398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1247171-1247264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246820-1246867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246414-1246521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246232-1246309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246076-1246156:-1:exon

LOC103533032
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1249713..1252357
location: region:1249713-1252357:1
so has part: feature:1249713-1252357:1:exon
subclass of: SO_0000010

103533032
type: Gene
SIO_000068: ncbigene

position:1249713:1
position: 1249713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252357:1
position: 1252357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249713-1252357:1:exon

LOC103533032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533032
product: aquaporin-4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468134.1
SIO_010081: LOC103533032
subclass of: SO_0000673
so part of: LOC103533032
location: join(1249713..1250456,1250963..1251283,1251363..1251515,1251588..1251668,1251931..1252249,1252345..1252357)
location: region:1249713-1252357:1
so has part: feature:1249713-1250456:1:exon
so has part: feature:1250963-1251283:1:exon
so has part: feature:1251363-1251515:1:exon
so has part: feature:1251588-1251668:1:exon
so has part: feature:1251931-1252249:1:exon
so has part: feature:1252345-1252357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1249713-1250456:1:exon

position:1250456:1
position: 1250456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250963-1251283:1:exon

position:1250963:1
position: 1250963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251283:1
position: 1251283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1251363-1251515:1:exon

position:1251363:1
position: 1251363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251515:1
position: 1251515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1251588-1251668:1:exon

position:1251588:1
position: 1251588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251668:1
position: 1251668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1251931-1252249:1:exon

position:1251931:1
position: 1251931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252249:1
position: 1252249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1252345-1252357:1:exon

position:1252345:1
position: 1252345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103533032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533032
product: aquaporin-4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030468135.1
SIO_010081: LOC103533032
subclass of: SO_0000673
so part of: LOC103533032
location: join(1249713..1250456,1250963..1251283,1251423..1251515,1251588..1251668,1251931..1252249,1252345..1252357)
location: region:1249713-1252357:1
so has part: feature:1249713-1250456:1:exon
so has part: feature:1250963-1251283:1:exon
so has part: feature:1251423-1251515:1:exon
so has part: feature:1251588-1251668:1:exon
so has part: feature:1251931-1252249:1:exon
so has part: feature:1252345-1252357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1249713-1250456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250963-1251283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251423-1251515:1:exon

position:1251423:1
position: 1251423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1251588-1251668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251931-1252249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252345-1252357:1:exon

LOC103533032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin-4-like isoform X1
translation: MAIGEELRRGCFWQGVLAEAAATFIFVVMVLGASTAPGPLAPALAGGLVAGGLACSLGTPQANPALTLALLCTRKMGALQGAAGLLAQCAGATAAAAAARMVLPDDTGLVTRVSTVGTPGQALAWETLATFQLALVTFATSDHAAPQGGLALGSAVAAGALAAGPFSGGSMNPARSLGPAIVTGVWDDHWVYWLGPVLGAVLAGFSYEFILAPSASREKLGACLACRDVALVETTSTSPSSPSAHAPLPPPAKQGRGAA
SIO_010081: LOC103533032
subclass of: SO_0000673
so part of: LOC103533032
location: join(1250442..1250456,1250963..1251283,1251363..1251515,1251588..1251668,1251931..1252140)
location: region:1250442-1252140:1
so has part: feature:1250442-1250456:1:exon
so has part: feature:1250963-1251283:1:exon
so has part: feature:1251363-1251515:1:exon
so has part: feature:1251588-1251668:1:exon
so has part: feature:1251931-1252140:1:exon

XP_030323994.1
type: Protein
SIO_000068: ncbiprotein

position:1250442:1
position: 1250442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252140:1
position: 1252140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250442-1250456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250963-1251283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251363-1251515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251588-1251668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251931-1252140:1:exon

LOC103533032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber major intrinsic protein-like isoform X2
translation: MAIGEELRRGCFWQGVLAEAAATFIFVVMVLGASTAPGPLAPALAGGLVAGGLACSLGTPQANPALTLALLCTRKMGALQGAAGLLAQCAGATAAAAAARMVLPDDTGLVTRLALVTFATSDHAAPQGGLALGSAVAAGALAAGPFSGGSMNPARSLGPAIVTGVWDDHWVYWLGPVLGAVLAGFSYEFILAPSASREKLGACLACRDVALVETTSTSPSSPSAHAPLPPPAKQGRGAA
SIO_010081: LOC103533032
subclass of: SO_0000673
so part of: LOC103533032
location: join(1250442..1250456,1250963..1251283,1251423..1251515,1251588..1251668,1251931..1252140)
location: region:1250442-1252140:1
so has part: feature:1250442-1250456:1:exon
so has part: feature:1250963-1251283:1:exon
so has part: feature:1251423-1251515:1:exon
so has part: feature:1251588-1251668:1:exon
so has part: feature:1251931-1252140:1:exon

XP_030323995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1250442-1250456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250963-1251283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251423-1251515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251588-1251668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251931-1252140:1:exon

LOC103533033
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1253069..1254781
location: region:1253069-1254781:1
so has part: feature:1253069-1254781:1:exon
subclass of: SO_0000010

103533033
type: Gene
SIO_000068: ncbigene

position:1253069:1
position: 1253069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254781:1
position: 1254781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253069-1254781:1:exon

LOC103533033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533033
product: lens fiber major intrinsic protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 69 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468130.1
SIO_010081: LOC103533033
subclass of: SO_0000673
so part of: LOC103533033
location: join(1253069..1253454,1253795..1253959,1254066..1254146,1254594..1254781)
location: region:1253069-1254781:1
so has part: feature:1253069-1253454:1:exon
so has part: feature:1253795-1253959:1:exon
so has part: feature:1254066-1254146:1:exon
so has part: feature:1254594-1254781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253069-1253454:1:exon

position:1253454:1
position: 1253454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1253795-1253959:1:exon

position:1253795:1
position: 1253795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253959:1
position: 1253959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254066-1254146:1:exon

position:1254066:1
position: 1254066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254146:1
position: 1254146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1254594-1254781:1:exon

position:1254594:1
position: 1254594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103533033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber major intrinsic protein
translation: MRELRSSAFWRAVLAEFLGSLLYALLGLGASLRWAPGPPSVLGAALAFGLAQATLVQALGNVSGGHVNPAITLALLLASQLSLPRALGYLLAQLLGTLAGAGVLYGVTPAPIRGTLGLSALHPGVGPGQGTVVEMLLTAQFVLCALASFDERHNGRPGSAALPIGFSLALGHLFGIHYTGASMNPARSFAPAVITRNFANHWVYWAGPLLGAALGAVLYEFALCPRPRSMAERLAALKGEPPAAEPPAEPPAEPLELKTQGL
SIO_010081: LOC103533033
subclass of: SO_0000673
so part of: LOC103533033
location: join(1253095..1253454,1253795..1253959,1254066..1254146,1254594..1254776)
location: region:1253095-1254776:1
so has part: feature:1253095-1253454:1:exon
so has part: feature:1253795-1253959:1:exon
so has part: feature:1254066-1254146:1:exon
so has part: feature:1254594-1254776:1:exon

XP_030323990.1
type: Protein
SIO_000068: ncbiprotein

position:1253095:1
position: 1253095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254776:1
position: 1254776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253095-1253454:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1253795-1253959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254066-1254146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254594-1254776:1:exon

TIMELESS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TIMELESS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1255414..1262090
location: region:1255414-1262090:1
so has part: feature:1255414-1262090:1:exon
subclass of: SO_0000010

103533034
type: Gene
SIO_000068: ncbigene

position:1255414:1
position: 1255414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262090:1
position: 1262090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255414-1262090:1:exon

TIMELESS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIMELESS
product: timeless circadian regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030468096.1
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: join(1255414..1255466,1255943..1256068,1256156..1256309,1256393..1256507,1256591..1256653,1256767..1256868,1256976..1257131,1257210..1257343,1257431..1257518,1257604..1257780,1257857..1258074,1258151..1258254,1258337..1258506,1258581..1258706,1258782..1258933,1259011..1259108,1259178..1259286,1259373..1259574,1259657..1259808,1259884..1259969,1260041..1260158,1260240..1260322,1260397..1260539,1260627..1260774,1260852..1260920,1261003..1261121,1261199..1261337,1261424..1261466,1261577..1261668,1261766..1262090)
location: region:1255414-1262090:1
so has part: feature:1255414-1255466:1:exon
so has part: feature:1255943-1256068:1:exon
so has part: feature:1256156-1256309:1:exon
so has part: feature:1256393-1256507:1:exon
so has part: feature:1256591-1256653:1:exon
so has part: feature:1256767-1256868:1:exon
so has part: feature:1256976-1257131:1:exon
so has part: feature:1257210-1257343:1:exon
so has part: feature:1257431-1257518:1:exon
so has part: feature:1257604-1257780:1:exon
so has part: feature:1257857-1258074:1:exon
so has part: feature:1258151-1258254:1:exon
so has part: feature:1258337-1258506:1:exon
so has part: feature:1258581-1258706:1:exon
so has part: feature:1258782-1258933:1:exon
so has part: feature:1259011-1259108:1:exon
so has part: feature:1259178-1259286:1:exon
so has part: feature:1259373-1259574:1:exon
so has part: feature:1259657-1259808:1:exon
so has part: feature:1259884-1259969:1:exon
so has part: feature:1260041-1260158:1:exon
so has part: feature:1260240-1260322:1:exon
so has part: feature:1260397-1260539:1:exon
so has part: feature:1260627-1260774:1:exon
so has part: feature:1260852-1260920:1:exon
so has part: feature:1261003-1261121:1:exon
so has part: feature:1261199-1261337:1:exon
so has part: feature:1261424-1261466:1:exon
so has part: feature:1261577-1261668:1:exon
so has part: feature:1261766-1262090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1255414-1255466:1:exon

position:1255466:1
position: 1255466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1255943-1256068:1:exon

position:1255943:1
position: 1255943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256068:1
position: 1256068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256156-1256309:1:exon

position:1256156:1
position: 1256156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256309:1
position: 1256309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1256393-1256507:1:exon

position:1256393:1
position: 1256393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256507:1
position: 1256507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1256591-1256653:1:exon

position:1256591:1
position: 1256591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256653:1
position: 1256653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1256767-1256868:1:exon

position:1256767:1
position: 1256767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256868:1
position: 1256868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1256976-1257131:1:exon

position:1256976:1
position: 1256976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257131:1
position: 1257131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1257210-1257343:1:exon

position:1257210:1
position: 1257210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257343:1
position: 1257343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1257431-1257518:1:exon

position:1257431:1
position: 1257431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257518:1
position: 1257518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1257604-1257780:1:exon

position:1257604:1
position: 1257604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257780:1
position: 1257780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1257857-1258074:1:exon

position:1257857:1
position: 1257857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258074:1
position: 1258074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1258151-1258254:1:exon

position:1258151:1
position: 1258151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258254:1
position: 1258254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1258337-1258506:1:exon

position:1258337:1
position: 1258337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258506:1
position: 1258506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1258581-1258706:1:exon

position:1258581:1
position: 1258581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258706:1
position: 1258706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1258782-1258933:1:exon

position:1258782:1
position: 1258782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258933:1
position: 1258933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1259011-1259108:1:exon

position:1259011:1
position: 1259011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259108:1
position: 1259108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1259178-1259286:1:exon

position:1259178:1
position: 1259178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259286:1
position: 1259286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1259373-1259574:1:exon

position:1259373:1
position: 1259373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259574:1
position: 1259574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1259657-1259808:1:exon

position:1259657:1
position: 1259657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259808:1
position: 1259808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1259884-1259969:1:exon

position:1259884:1
position: 1259884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259969:1
position: 1259969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1260041-1260158:1:exon

position:1260041:1
position: 1260041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260158:1
position: 1260158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1260240-1260322:1:exon

position:1260240:1
position: 1260240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260322:1
position: 1260322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1260397-1260539:1:exon

position:1260397:1
position: 1260397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260539:1
position: 1260539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1260627-1260774:1:exon

position:1260627:1
position: 1260627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260774:1
position: 1260774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1260852-1260920:1:exon

position:1260852:1
position: 1260852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260920:1
position: 1260920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1261003-1261121:1:exon

position:1261003:1
position: 1261003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261121:1
position: 1261121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1261199-1261337:1:exon

position:1261199:1
position: 1261199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261337:1
position: 1261337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1261424-1261466:1:exon

position:1261424:1
position: 1261424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261466:1
position: 1261466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1261577-1261668:1:exon

position:1261577:1
position: 1261577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261668:1
position: 1261668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1261766-1262090:1:exon

position:1261766:1
position: 1261766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMELESS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIMELESS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein timeless homolog
translation: MDLFMMNCELLATCSALGYLEGDIYHREPDCLESVKDLIRYLRHEDETRDVRQQLGAAQILQNDLLPILVQYPQDKVLFDAVIRLMVNLTQPALLCFGKVPPDATSRHHFLQVLSYLQAYKEAFASEKVFVVLSEKLYDLLQLDWEQRQEEDTLLIERILLLVRNVLHVPPDPTEEQGVDGDASVHDRVLWALHISGMDDLLKFLASAQTEQQWALHVLEIISLMFRDQSPEELAVLGQGQGAAEHGEDTRELQTLRQRELAEKRARALQRPSRHSRFGGSYVLQGLKAIGDRDVVFHKGLHNLKSYSHDLGKELRRVPRRRQAAPETEIPRRSARNVRLFLRCFCQDFLENCYNRLMLQVKDQLVREKAQQHDETYYLWATAFFMAFNRRRGFRPELVSETVGVRAFHFIEQNLTTYYEMALMDKKEAATWAHRMHLALKAYQELLRTVQEMDRSPEQAVRDSSQVIKSNIFYLMEYRELFLALFRKFDETKQPRSFLRDLVETAHLFLRMLERFCQGRASLVVQSKRVRRKKKRRAPSAPVPPPPSAAGLEELWAGLAPQLQACLQGQVSLPEDVVPFDAASETPVEEQRAEALLRIQGCLRDAQVPQALRLLRSARDIWPEGDVFGHPEAGPDEETRLLREILFAALPRPEVEEVEEEEEEEEEEEEETMQVSEKEFNFLDYLKRFACAPVVRALVLLLRGYNCNSPRTNHCAARLLHRLARDLHMEALLFQLSLFTLFHRLLSDPAASAYQELVALAKFILGKFFTLAATNKKAFVELLFWKSPTAIREMTEGYSSLGEGERTARSRGPPWTPQEEQELRELYWKYKEVEVEDIITNILSHLPGRTRKQVVKQLVRLGLAASARDFPRERKGTRLVLWTEEQEEELRRLFEEFQGSEDVLGNIMKHLTARRSRARVVEKLLGLGLVSERKELYKKRRRKGHGAGPAAAAAPAVTPQDSSAEDGDSEEEEEEDEADHWVPEEGAGQGLAHHLHQEGLSGPLQWLENSLRRTAGDREEDGVSHPVPLVPLSEENEDAMEDRRFQALLRQLGLRPPSSEQESFWRIPAALTPQQLRRAAASIAHPDSPASPQGLLQPLRCPQDPAAAAEQSLARLGSDSESEEHVPDPSSVLPGTKRRRELHSEDEDMGSSGAEPAPAAPCSQEDEDEDEDPQPWGRRKRIRCLEEEEEED
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: join(1255972..1256068,1256156..1256309,1256393..1256507,1256591..1256653,1256767..1256868,1256976..1257131,1257210..1257343,1257431..1257518,1257604..1257780,1257857..1258074,1258151..1258254,1258337..1258506,1258581..1258706,1258782..1258933,1259011..1259108,1259178..1259286,1259373..1259574,1259657..1259808,1259884..1259969,1260041..1260158,1260240..1260322,1260397..1260539,1260627..1260774,1260852..1260920,1261003..1261121,1261199..1261337,1261424..1261466,1261577..1261668,1261766..1261887)
location: region:1255972-1261887:1
so has part: feature:1255972-1256068:1:exon
so has part: feature:1256156-1256309:1:exon
so has part: feature:1256393-1256507:1:exon
so has part: feature:1256591-1256653:1:exon
so has part: feature:1256767-1256868:1:exon
so has part: feature:1256976-1257131:1:exon
so has part: feature:1257210-1257343:1:exon
so has part: feature:1257431-1257518:1:exon
so has part: feature:1257604-1257780:1:exon
so has part: feature:1257857-1258074:1:exon
so has part: feature:1258151-1258254:1:exon
so has part: feature:1258337-1258506:1:exon
so has part: feature:1258581-1258706:1:exon
so has part: feature:1258782-1258933:1:exon
so has part: feature:1259011-1259108:1:exon
so has part: feature:1259178-1259286:1:exon
so has part: feature:1259373-1259574:1:exon
so has part: feature:1259657-1259808:1:exon
so has part: feature:1259884-1259969:1:exon
so has part: feature:1260041-1260158:1:exon
so has part: feature:1260240-1260322:1:exon
so has part: feature:1260397-1260539:1:exon
so has part: feature:1260627-1260774:1:exon
so has part: feature:1260852-1260920:1:exon
so has part: feature:1261003-1261121:1:exon
so has part: feature:1261199-1261337:1:exon
so has part: feature:1261424-1261466:1:exon
so has part: feature:1261577-1261668:1:exon
so has part: feature:1261766-1261887:1:exon

XP_030323956.1
type: Protein
SIO_000068: ncbiprotein

position:1255972:1
position: 1255972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261887:1
position: 1261887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255972-1256068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256156-1256309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256393-1256507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256591-1256653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1256767-1256868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1256976-1257131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1257210-1257343:1:exon